Carg13670 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13670
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transcription repressor
Location	Cucurbita_argyrosperma_scaffold_058 : 29086 .. 29571 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCAGTGGCCTCAACCCAACGGCATCAGCAAGAACAGAGAGGCATCAGGGCTTTGTGCTGTGGATGCAGTTGTAATTGCAGGTTGAGTTTTTCATCTTCCGAGGAAGTAGAAAGCTTCCGGTCTGAGAGATTCCCGTCGGTCTCCAGCATAGCCCACGCCATGGTTCAGGAGAGACTCGACCAAATGATAAGGGAAAATCGAGAGATGAGGCAGAGTAAAGAACGAAGGAAACAGAGAAGTGAAGACACCAAATTTGTTGTAATGGTGGCGAGGGAGAAATGCTCTGACGACCCCAGAGAGGACTTTAGAGTTTCGATGATGGAAATGATTTTGGCTAACCGAATCGAGGAGCCAAAGGATCTACGTAGCCTGTTGAACTATTATATCTCCATGAACTCAGATGAGTGCCATGGGGTCATCTTAGAGGTGTTCCATGAGGTTTGTAGCCATTTGTTCTTGGCTTGTAAACGCCATTTGTAG

mRNA sequence

ATGAAAGCAGTGGCCTCAACCCAACGGCATCAGCAAGAACAGAGAGGCATCAGGGCTTTGTGCTGTGGATGCAGTTGTAATTGCAGGTTGAGTTTTTCATCTTCCGAGGAAGTAGAAAGCTTCCGGTCTGAGAGATTCCCGTCGGTCTCCAGCATAGCCCACGCCATGGTTCAGGAGAGACTCGACCAAATGATAAGGGAAAATCGAGAGATGAGGCAGAGTAAAGAACGAAGGAAACAGAGAAGTGAAGACACCAAATTTGTTGTAATGGTGGCGAGGGAGAAATGCTCTGACGACCCCAGAGAGGACTTTAGAGTTTCGATGATGGAAATGATTTTGGCTAACCGAATCGAGGAGCCAAAGGATCTACGTAGCCTGTTGAACTATTATATCTCCATGAACTCAGATGAGTGCCATGGGGTCATCTTAGAGGTGTTCCATGAGGTTTGTAGCCATTTGTTCTTGGCTTGTAAACGCCATTTGTAG

Coding sequence (CDS)

ATGAAAGCAGTGGCCTCAACCCAACGGCATCAGCAAGAACAGAGAGGCATCAGGGCTTTGTGCTGTGGATGCAGTTGTAATTGCAGGTTGAGTTTTTCATCTTCCGAGGAAGTAGAAAGCTTCCGGTCTGAGAGATTCCCGTCGGTCTCCAGCATAGCCCACGCCATGGTTCAGGAGAGACTCGACCAAATGATAAGGGAAAATCGAGAGATGAGGCAGAGTAAAGAACGAAGGAAACAGAGAAGTGAAGACACCAAATTTGTTGTAATGGTGGCGAGGGAGAAATGCTCTGACGACCCCAGAGAGGACTTTAGAGTTTCGATGATGGAAATGATTTTGGCTAACCGAATCGAGGAGCCAAAGGATCTACGTAGCCTGTTGAACTATTATATCTCCATGAACTCAGATGAGTGCCATGGGGTCATCTTAGAGGTGTTCCATGAGGTTTGTAGCCATTTGTTCTTGGCTTGTAAACGCCATTTGTAG

Protein sequence

MKAVASTQRHQQEQRGIRALCCGCSCNCRLSFSSSEEVESFRSERFPSVSSIAHAMVQERLDQMIRENREMRQSKERRKQRSEDTKFVVMVAREKCSDDPREDFRVSMMEMILANRIEEPKDLRSLLNYYISMNSDECHGVILEVFHEVCSHLFLACKRHL

Homology

[Close]

BLAST of Carg13670 vs. NCBI nr
Match: XP_022977985.1 (probable transcription repressor OFP9 [Cucurbita maxima])

HSP 1 Score: 261.2 bits (666), Expect = 2.4e-66
Identity = 154/161 (95.65%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MKAVASTQRHQQEQRGIRALCCGXXXXXXXXXXXXEEVESFRSERFPSVSSIAHAMVQER 60
           MKAVASTQRHQQEQR  RALCC XXXXXXXXXXXX EVES  SERFPSVS IAHAMVQER
Sbjct: 1   MKAVASTQRHQQEQRAFRALCCXXXXXXXXXXXXXXEVESLSSERFPSVSGIAHAMVQER 60

Query: 61  LDQMIRENREMRXXXXXXXQRSEDTKFVVMVAREKCSDDPREDFRVSMMEMILANRIEEP 120
           LDQMIRENREMRXXXXXXXQRSEDTKFVVMVAREKCSDDPREDFRVSMMEMILANRIEEP
Sbjct: 61  LDQMIRENREMRXXXXXXXQRSEDTKFVVMVAREKCSDDPREDFRVSMMEMILANRIEEP 120

Query: 121 KDLRSLLNYYISMNSDECHGVILEVFHEVCSHLFLACKRHL 162
           KDLRSLLNYYISMNSDECHGVILEVFHEVCSHLFLACKRHL
Sbjct: 121 KDLRSLLNYYISMNSDECHGVILEVFHEVCSHLFLACKRHL 161

[Close]

BLAST of Carg13670 vs. NCBI nr
Match: XP_023522919.1 (probable transcription repressor OFP9, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.1 bits (614), Expect = 2.6e-60
Identity = 131/148 (88.51%), Postives = 132/148 (89.19%), Query Frame = 0


Query: 1   MKAVASTQRHQQEQRGIRALCCGXXXXXXXXXXXXEEVESFRSERFPSVSSIAHAMVQER 60
           MKAVASTQRHQQEQR  RALCCGXXXXXX      EEVESFRSERFPSVSSIAHAMVQER
Sbjct: 1   MKAVASTQRHQQEQRAFRALCCGXXXXXXLSFSSSEEVESFRSERFPSVSSIAHAMVQER 60

Query: 61  LDQMIRENREMRXXXXXXXQRSEDTKFVVMVAREKCSDDPREDFRVSMMEMILANRIEEP 120
           LDQMIRENREM+       QR EDTKFVVMVAREKCSDDPREDFRVSMMEMILANRIEEP
Sbjct: 61  LDQMIRENREMKQSKERRKQRCEDTKFVVMVAREKCSDDPREDFRVSMMEMILANRIEEP 120

Query: 121 KDLRSLLNYYISMNSDECHGVILEVFHE 149
           KDLRSLLNYYISMNSDECHGVILEVFHE
Sbjct: 121 KDLRSLLNYYISMNSDECHGVILEVFHE 148

[Close]

BLAST of Carg13670 vs. NCBI nr
Match: XP_023544012.1 (probable transcription repressor OFP9 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.1 bits (614), Expect = 2.6e-60
Identity = 137/148 (92.57%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 1   MKAVASTQRHQQEQRGIRALCCGXXXXXXXXXXXXEEVESFRSERFPSVSSIAHAMVQER 60
           MKAVASTQRHQQEQR  RALCCGXXXXXXXXXXXXEEVESFRSERFPSVSSIAHAMVQER
Sbjct: 1   MKAVASTQRHQQEQRAFRALCCGXXXXXXXXXXXXEEVESFRSERFPSVSSIAHAMVQER 60

Query: 61  LDQMIRENREMRXXXXXXXQRSEDTKFVVMVAREKCSDDPREDFRVSMMEMILANRIEEP 120
           LDQMIRENREM+       QR EDTKFVVMVAREKCSDDPREDFRVSMMEMILANRIEEP
Sbjct: 61  LDQMIRENREMKQSKERRKQRCEDTKFVVMVAREKCSDDPREDFRVSMMEMILANRIEEP 120

Query: 121 KDLRSLLNYYISMNSDECHGVILEVFHE 149
           KDLRSLLNYYISMNSDECHGVILEVFHE
Sbjct: 121 KDLRSLLNYYISMNSDECHGVILEVFHE 148

[Close]

BLAST of Carg13670 vs. NCBI nr
Match: XP_022132927.1 (probable transcription repressor OFP9 [Momordica charantia])

HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46
Identity = 100/119 (84.03%), Postives = 107/119 (89.92%), Query Frame = 0


Query: 43  SERFPSVSSIAHAMVQERLDQMIRENREMRXXXXXXXQRS-EDTKFVVMVAREKCSDDPR 102
           SE+FPSVSSIAHAMVQERLDQMIRE RE+R       QRS E+TKFVVMVA EKCSDDPR
Sbjct: 44  SEKFPSVSSIAHAMVQERLDQMIRERREIRHGKERRKQRSTEETKFVVMVAMEKCSDDPR 103

Query: 103 EDFRVSMMEMILANRIEEPKDLRSLLNYYISMNSDECHGVILEVFHEVCSHLFLACKRH 161
           EDFRVSMMEMILANRI++PKDLR+LLNYYISMNS+ECH VILEVFHEVCS LFLACKRH
Sbjct: 104 EDFRVSMMEMILANRIDDPKDLRNLLNYYISMNSEECHDVILEVFHEVCSSLFLACKRH 162

[Close]

BLAST of Carg13670 vs. NCBI nr
Match: XP_017978504.1 (PREDICTED: probable transcription repressor OFP9 [Theobroma cacao])

HSP 1 Score: 193.0 bits (489), Expect = 8.0e-46
Identity = 103/160 (64.38%), Postives = 119/160 (74.38%), Query Frame = 0


Query: 1   MKAVASTQRHQQEQRGIRALCCGXXXXXXXXXXXXEEVESFRSERFPSVSSIAHAMVQER 60
           MKA    ++ + +QRG RALCC             EE ES  S+RF S+SS+AHAMVQER
Sbjct: 30  MKASKEHKKQKLQQRGCRALCCS----CRLSVSSSEEAESSNSDRFASISSLAHAMVQER 89

Query: 61  LDQMIRENREMRXXXXXXXQRSEDTKFVVMVAREKCSDDPREDFRVSMMEMILANRIEEP 120
           LDQMIRE +E R       QRSE TKFVVMVA EKCS DPREDFR SM+EMI+ANRI+EP
Sbjct: 90  LDQMIRERQETR-HIERRRQRSEGTKFVVMVAMEKCSYDPREDFRESMVEMIMANRIQEP 149

Query: 121 KDLRSLLNYYISMNSDECHGVILEVFHEVCSHLFLACKRH 161
           KDLRSLLNYY+SMNS+E HG+ILEVFH+VC+ LFL CK H
Sbjct: 150 KDLRSLLNYYVSMNSEEYHGIILEVFHQVCTSLFLCCKCH 184

[Close]

BLAST of Carg13670 vs. TAIR10
Match: AT4G18830.1 (ovate family protein 5)

HSP 1 Score: 62.4 bits (150), Expect = 3.0e-10
Identity = 37/103 (35.92%), Postives = 54/103 (52.43%), Query Frame = 0


Query: 47  PSVSSIAHAMVQERLDQMIRENREMRXXXXXXXQRSEDTKFVVMVAREKCSDDPREDFRV 106
           P  S        E L +  +  RE            E+  F V+    KCS DP++DFR 
Sbjct: 244 PRASEKCRVKAIEDLKKAKQRAREHELLIETADGGMENESFAVV----KCSSDPQKDFRD 303

Query: 107 SMMEMILANRIEEPKDLRSLLNYYISMNSDECHGVILEVFHEV 150
           SM+EMI+ N I  P++L+ LL  Y+ +N+DE H +I+ VF +V
Sbjct: 304 SMIEMIMENGINHPEELKELLVCYLRLNTDEYHDMIISVFQQV 342

[Close]

BLAST of Carg13670 vs. TAIR10
Match: AT2G36026.1 (Ovate family protein)

HSP 1 Score: 62.0 bits (149), Expect = 3.9e-10
Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 95  KCSDDPREDFRVSMMEMILANRIEEPKDLRSLLNYYISMNSDECHGVILEVFHEVCSHLF 154
           K SDDP  DFR SM++MIL N I    DLR LL+ ++S+N    HG+I+  F E+   +F
Sbjct: 92  KDSDDPYLDFRQSMLQMILENEIYSKNDLRELLHCFLSLNEPYHHGIIIRAFSEIWDGVF 151

Query: 155 LACKR 160
            A KR
Sbjct: 152 SAAKR 156

[Close]

BLAST of Carg13670 vs. TAIR10
Match: AT5G58360.1 (ovate family protein 3)

HSP 1 Score: 60.1 bits (144), Expect = 1.5e-09
Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 97  SDDPREDFRVSMMEMILANRIEEPKDLRSLLNYYISMNSDECHGVILEVFHEVCSHL 154
           S DP +DFR SM+EMI+ N++ E KDL  LL  Y+S+NS E H VI++ F     HL
Sbjct: 232 SVDPEKDFRESMVEMIMENKMREQKDLEDLLACYLSLNSSEYHDVIIKAFENTWLHL 288

[Close]

BLAST of Carg13670 vs. TAIR10
Match: AT3G52525.1 (ovate family protein 6)

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-09
Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 91  VAREKCSDDPREDFRVSMMEMILANRIEEPKDLRSLLNYYISMNSDECHGVILEVFHEV 150
           VA EK SDDP  DFR SM++MIL N+I    +LR LL  ++S+NS   HG+I+  F E+
Sbjct: 68  VAVEKDSDDPYLDFRQSMLQMILENQIYSKDELRELLQCFLSLNSHYHHGIIVRAFSEI 126

[Close]

BLAST of Carg13670 vs. TAIR10
Match: AT5G01840.1 (ovate family protein 1)

HSP 1 Score: 57.8 bits (138), Expect = 7.3e-09
Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0


Query: 95  KCSDDPREDFRVSMMEMILANRIEEPKDLRSLLNYYISMNSDECHGVILEVFHEV 150
           K S DP+ DF+ SM EMI  N+I   KDL  LL  Y+ +NSDE H +I+ VF ++
Sbjct: 204 KASVDPKRDFKESMEEMIAENKIRATKDLEELLACYLCLNSDEYHAIIINVFKQI 258

[Close]

BLAST of Carg13670 vs. Swiss-Prot
Match: sp|P0DKG3|OFP9_ARATH (Probable transcription repressor OFP9 OS=Arabidopsis thaliana OX=3702 GN=OFP9 PE=3 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23
Identity = 65/118 (55.08%), Postives = 82/118 (69.49%), Query Frame = 0


Query: 48  SVSSIAHAMVQERLDQMIRENREMRXXXXXXXQRS-----------EDTKFVVMVAREKC 107
           S+SS+AH MVQE+L+QMIRE +E     XXXX                TKF+VM+A EKC
Sbjct: 296 SLSSLAHYMVQEKLEQMIRETQEATHQEXXXXXXXXXXXXXXXGSISSTKFIVMMAMEKC 355

Query: 108 SDDPREDFRVSMMEMILANRIEEPKDLRSLLNYYISMNSDECHGVILEVFHEVCSHLF 155
           S DPR+DFR SM+EMI+AN+I+E  +LRSLL YY+SMN  E    ILE+F+EVC+ LF
Sbjct: 356 SFDPRKDFRDSMVEMIVANKIKEADELRSLLEYYLSMNPREYRSAILEIFYEVCADLF 413

[Close]

BLAST of Carg13670 vs. Swiss-Prot
Match: sp|Q8VZN1|OFP5_ARATH (Transcription repressor OFP5 OS=Arabidopsis thaliana OX=3702 GN=OFP5 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.3e-09
Identity = 37/103 (35.92%), Postives = 54/103 (52.43%), Query Frame = 0


Query: 47  PSVSSIAHAMVQERLDQMIRENREMRXXXXXXXQRSEDTKFVVMVAREKCSDDPREDFRV 106
           P  S        E L +  +  RE            E+  F V+    KCS DP++DFR 
Sbjct: 244 PRASEKCRVKAIEDLKKAKQRAREHELLIETADGGMENESFAVV----KCSSDPQKDFRD 303

Query: 107 SMMEMILANRIEEPKDLRSLLNYYISMNSDECHGVILEVFHEV 150
           SM+EMI+ N I  P++L+ LL  Y+ +N+DE H +I+ VF +V
Sbjct: 304 SMIEMIMENGINHPEELKELLVCYLRLNTDEYHDMIISVFQQV 342

[Close]

BLAST of Carg13670 vs. Swiss-Prot
Match: sp|Q9LVL4|OFP3_ARATH (Transcription repressor OFP3 OS=Arabidopsis thaliana OX=3702 GN=OFP3 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.7e-08
Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 97  SDDPREDFRVSMMEMILANRIEEPKDLRSLLNYYISMNSDECHGVILEVFHEVCSHL 154
           S DP +DFR SM+EMI+ N++ E KDL  LL  Y+S+NS E H VI++ F     HL
Sbjct: 232 SVDPEKDFRESMVEMIMENKMREQKDLEDLLACYLSLNSSEYHDVIIKAFENTWLHL 288

[Close]

BLAST of Carg13670 vs. Swiss-Prot
Match: sp|Q3EAL1|OFP6_ARATH (Transcription repressor OFP6 OS=Arabidopsis thaliana OX=3702 GN=OFP6 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.5e-08
Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 91  VAREKCSDDPREDFRVSMMEMILANRIEEPKDLRSLLNYYISMNSDECHGVILEVFHEV 150
           VA EK SDDP  DFR SM++MIL N+I    +LR LL  ++S+NS   HG+I+  F E+
Sbjct: 68  VAVEKDSDDPYLDFRQSMLQMILENQIYSKDELRELLQCFLSLNSHYHHGIIVRAFSEI 126

[Close]

BLAST of Carg13670 vs. Swiss-Prot
Match: sp|Q9LZW2|OFP1_ARATH (Transcription repressor OFP1 OS=Arabidopsis thaliana OX=3702 GN=OFP1 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07
Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0


Query: 95  KCSDDPREDFRVSMMEMILANRIEEPKDLRSLLNYYISMNSDECHGVILEVFHEV 150
           K S DP+ DF+ SM EMI  N+I   KDL  LL  Y+ +NSDE H +I+ VF ++
Sbjct: 204 KASVDPKRDFKESMEEMIAENKIRATKDLEELLACYLCLNSDEYHAIIINVFKQI 258

[Close]

BLAST of Carg13670 vs. TrEMBL
Match: tr|A0A1U8J294|A0A1U8J294_GOSHI (probable transcription repressor OFP9 OS=Gossypium hirsutum OX=3635 GN=LOC107902866 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.6e-45
Identity = 99/160 (61.88%), Postives = 117/160 (73.12%), Query Frame = 0


Query: 1   MKAVASTQRHQQEQRGIRALCCGXXXXXXXXXXXXEEVESFRSERFPSVSSIAHAMVQER 60
           MKA    ++   +QRG +ALCC             EE ES  S+R+ S+SS+AHAMVQER
Sbjct: 1   MKASKEHKQQGLQQRGCKALCCS----CRLSVSSSEEAESSNSDRYASISSLAHAMVQER 60

Query: 61  LDQMIRENREMRXXXXXXXQRSEDTKFVVMVAREKCSDDPREDFRVSMMEMILANRIEEP 120
           LDQMIRE +E R       Q SE TKF+VMVA EKCS DPREDF  SM+EMI ANRI+EP
Sbjct: 61  LDQMIRERQETRHNVERRRQSSEGTKFIVMVAMEKCSYDPREDFSKSMVEMIKANRIQEP 120

Query: 121 KDLRSLLNYYISMNSDECHGVILEVFHEVCSHLFLACKRH 161
           KDLR+LLNYY+SMNS+E HG+ILEVFHEVC++LFL CKRH
Sbjct: 121 KDLRNLLNYYVSMNSEEYHGIILEVFHEVCTNLFLCCKRH 156

[Close]

BLAST of Carg13670 vs. TrEMBL
Match: tr|A0A0D2TLZ4|A0A0D2TLZ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G182600 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.6e-45
Identity = 99/160 (61.88%), Postives = 117/160 (73.12%), Query Frame = 0


Query: 1   MKAVASTQRHQQEQRGIRALCCGXXXXXXXXXXXXEEVESFRSERFPSVSSIAHAMVQER 60
           MKA    ++   +QRG +ALCC             EE ES  S+R+ S+SS+AHAMVQER
Sbjct: 1   MKASKEHKQQGLQQRGCKALCCS----CRLSVSSSEEAESSNSDRYASISSLAHAMVQER 60

Query: 61  LDQMIRENREMRXXXXXXXQRSEDTKFVVMVAREKCSDDPREDFRVSMMEMILANRIEEP 120
           LDQMIRE +E R       Q SE TKF+VMVA EKCS DPREDF  SM+EMI ANRI+EP
Sbjct: 61  LDQMIRERQETRHNVERRRQSSEGTKFIVMVAMEKCSYDPREDFSKSMVEMIKANRIQEP 120

Query: 121 KDLRSLLNYYISMNSDECHGVILEVFHEVCSHLFLACKRH 161
           KDLR+LLNYY+SMNS+E HG+ILEVFHEVC++LFL CKRH
Sbjct: 121 KDLRNLLNYYVSMNSEEYHGIILEVFHEVCTNLFLCCKRH 156

[Close]

BLAST of Carg13670 vs. TrEMBL
Match: tr|A0A2P5R081|A0A2P5R081_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD22849 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.6e-45
Identity = 99/160 (61.88%), Postives = 117/160 (73.12%), Query Frame = 0


Query: 1   MKAVASTQRHQQEQRGIRALCCGXXXXXXXXXXXXEEVESFRSERFPSVSSIAHAMVQER 60
           MKA    ++   +QRG +ALCC             EE ES  S+R+ S+SS+AHAMVQER
Sbjct: 1   MKASKEHKQQGLQQRGCKALCCS----CRLSVSSSEEAESSNSDRYASISSLAHAMVQER 60

Query: 61  LDQMIRENREMRXXXXXXXQRSEDTKFVVMVAREKCSDDPREDFRVSMMEMILANRIEEP 120
           LDQMIRE +E R       Q SE TKF+VMVA EKCS DPREDF  SM+EMI ANRI+EP
Sbjct: 61  LDQMIRERQETRHNVERRRQSSEGTKFIVMVAMEKCSYDPREDFSKSMVEMIKANRIQEP 120

Query: 121 KDLRSLLNYYISMNSDECHGVILEVFHEVCSHLFLACKRH 161
           KDLR+LLNYY+SMNS+E HG+ILEVFHEVC++LFL CKRH
Sbjct: 121 KDLRNLLNYYVSMNSEEYHGIILEVFHEVCTNLFLCCKRH 156

[Close]

BLAST of Carg13670 vs. TrEMBL
Match: tr|A0A1R3H3I3|A0A1R3H3I3_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_31838 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 5.9e-45
Identity = 101/154 (65.58%), Postives = 116/154 (75.32%), Query Frame = 0


Query: 8   QRHQQEQRGIRALCCGXXXXXXXXXXXXEEVESFRSERFPSVSSIAHAMVQERLDQMIRE 67
           ++ + +QRG RALCC             EE ES  SERF S+SS+AHAMVQERLDQMIRE
Sbjct: 9   KQQKLQQRGCRALCCS----CRLSVSSSEEAESSNSERFASISSLAHAMVQERLDQMIRE 68

Query: 68  NREMRXXXXXXXQRS-EDTKFVVMVAREKCSDDPREDFRVSMMEMILANRIEEPKDLRSL 127
            +E         QRS E TKFVVMVA EKCS DPREDFR SM+EMI+ANRI+EPKDLRSL
Sbjct: 69  RQETTRHIERRRQRSHEGTKFVVMVAMEKCSYDPREDFRQSMVEMIMANRIQEPKDLRSL 128

Query: 128 LNYYISMNSDECHGVILEVFHEVCSHLFLACKRH 161
           LNYY+SMNS+E HG+ILEVFHEVC++LFL CK H
Sbjct: 129 LNYYVSMNSEEYHGIILEVFHEVCTNLFLCCKCH 158

[Close]

BLAST of Carg13670 vs. TrEMBL
Match: tr|A0A1U8J1T2|A0A1U8J1T2_GOSHI (probable transcription repressor OFP9 OS=Gossypium hirsutum OX=3635 GN=LOC107902669 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.3e-44
Identity = 100/161 (62.11%), Postives = 118/161 (73.29%), Query Frame = 0


Query: 1   MKAVASTQRHQQEQRGIRALCCGXXXXXXXXXXXXEEVESFRSERFPSVSSIAHAMVQER 60
           MKA    ++   +QRG +ALCC             EE ES  S+R+ S+SS+AHAMVQER
Sbjct: 1   MKASKEHKQQGLQQRGCKALCCS----CRLSVSSSEEAESSNSDRYASISSLAHAMVQER 60

Query: 61  LDQMIRENREMRXXXXXXXQR-SEDTKFVVMVAREKCSDDPREDFRVSMMEMILANRIEE 120
           LDQMIRE +E R       QR SE TKF+VMVA EKCS DPREDF  SM+EMI ANRI+E
Sbjct: 61  LDQMIRERQETRHNVERRRQRSSEGTKFIVMVAMEKCSYDPREDFSKSMVEMIKANRIQE 120

Query: 121 PKDLRSLLNYYISMNSDECHGVILEVFHEVCSHLFLACKRH 161
           PKDLR+LLNYY+SMNS+E HG+ILEVFHEVC++LFL CKRH
Sbjct: 121 PKDLRNLLNYYVSMNSEEYHGIILEVFHEVCTNLFLCCKRH 157

The following BLAST results are available for this feature:

BLAST of Carg13670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977985.1	2.4e-66	95.65	probable transcription repressor OFP9 [Cucurbita maxima]	[more]
XP_023522919.1	2.6e-60	88.51	probable transcription repressor OFP9, partial [Cucurbita pepo subsp. pepo]	[more]
XP_023544012.1	2.6e-60	92.57	probable transcription repressor OFP9 [Cucurbita pepo subsp. pepo]	[more]
XP_022132927.1	1.6e-46	84.03	probable transcription repressor OFP9 [Momordica charantia]	[more]
XP_017978504.1	8.0e-46	64.38	PREDICTED: probable transcription repressor OFP9 [Theobroma cacao]	[more]

BLAST of Carg13670 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G18830.1	3.0e-10	35.92	ovate family protein 5	[more]
AT2G36026.1	3.9e-10	47.69	Ovate family protein	[more]
AT5G58360.1	1.5e-09	50.88	ovate family protein 3	[more]
AT3G52525.1	2.5e-09	50.85	ovate family protein 6	[more]
AT5G01840.1	7.3e-09	49.09	ovate family protein 1	[more]

BLAST of Carg13670 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P0DKG3\|OFP9_ARATH	1.3e-23	55.08	Probable transcription repressor OFP9 OS=Arabidopsis thaliana OX=3702 GN=OFP9 PE...	[more]
sp\|Q8VZN1\|OFP5_ARATH	5.3e-09	35.92	Transcription repressor OFP5 OS=Arabidopsis thaliana OX=3702 GN=OFP5 PE=1 SV=1	[more]
sp\|Q9LVL4\|OFP3_ARATH	2.7e-08	50.88	Transcription repressor OFP3 OS=Arabidopsis thaliana OX=3702 GN=OFP3 PE=1 SV=1	[more]
sp\|Q3EAL1\|OFP6_ARATH	4.5e-08	50.85	Transcription repressor OFP6 OS=Arabidopsis thaliana OX=3702 GN=OFP6 PE=1 SV=1	[more]
sp\|Q9LZW2\|OFP1_ARATH	1.3e-07	49.09	Transcription repressor OFP1 OS=Arabidopsis thaliana OX=3702 GN=OFP1 PE=1 SV=1	[more]

BLAST of Carg13670 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1U8J294\|A0A1U8J294_GOSHI	2.6e-45	61.88	probable transcription repressor OFP9 OS=Gossypium hirsutum OX=3635 GN=LOC107902...	[more]
tr\|A0A0D2TLZ4\|A0A0D2TLZ4_GOSRA	2.6e-45	61.88	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G182600 PE=4 ...	[more]
tr\|A0A2P5R081\|A0A2P5R081_GOSBA	2.6e-45	61.88	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD22849 PE=4 SV...	[more]
tr\|A0A1R3H3I3\|A0A1R3H3I3_9ROSI	5.9e-45	65.58	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_31838 PE=4 SV=1	[more]
tr\|A0A1U8J1T2\|A0A1U8J1T2_GOSHI	1.3e-44	62.11	probable transcription repressor OFP9 OS=Gossypium hirsutum OX=3635 GN=LOC107902...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0045892	negative regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR038933	Ovate
IPR006458	Ovate_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13670-RA	Carg13670-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 54..81
None	No IPR available	PANTHER	PTHR33057:SF13	TRANSCRIPTION REPRESSOR OFP9-RELATED	coord: 6..160
IPR006458	Ovate protein family, C-terminal	PFAM	PF04844	Ovate	coord: 97..154 e-value: 8.9E-21 score: 73.6
IPR006458	Ovate protein family, C-terminal	TIGRFAM	TIGR01568	TIGR01568	coord: 91..154 e-value: 6.6E-18 score: 62.8
IPR006458	Ovate protein family, C-terminal	PROSITE	PS51754	OVATE	coord: 93..152 score: 15.117
IPR038933	Ovate protein family	PANTHER	PTHR33057	FAMILY NOT NAMED	coord: 6..160

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13670	Cla014417	Watermelon (97103) v1	carwmB0931
Carg13670	Csa6G512880	Cucumber (Chinese Long) v2	carcuB0948
Carg13670	MELO3C007422	Melon (DHL92) v3.5.1	carmeB0918
Carg13670	ClCG01G021620	Watermelon (Charleston Gray)	carwcgB0906
Carg13670	CSPI06G33200	Wild cucumber (PI 183967)	carcpiB0971
Carg13670	Cucsa.044910	Cucumber (Gy14) v1	carcgyB1047
Carg13670	CmaCh07G003340	Cucurbita maxima (Rimu)	carcmaB1279
Carg13670	CmaCh03G005590	Cucurbita maxima (Rimu)	carcmaB1276
Carg13670	CmoCh03G005850	Cucurbita moschata (Rifu)	carcmoB1246
Carg13670	Lsi01G004620	Bottle gourd (USVL1VR-Ls)	carlsiB846
Carg13670	Cp4.1LG10g09760	Cucurbita pepo (Zucchini)	carcpeB1288
Carg13670	Cp4.1LG19g08040	Cucurbita pepo (Zucchini)	carcpeB1289
Carg13670	CsGy6G032780	Cucumber (Gy14) v2	carcgybB0922
Carg13670	MELO3C007422.2	Melon (DHL92) v3.6.1	carmedB0925
Carg13670	CsaV3_6G048660	Cucumber (Chinese Long) v3	carcucB0972
Carg13670	Cla97C01G021220	Watermelon (97103) v2	carwmbB0972
Carg13670	Bhi03G000479	Wax gourd	carwgoB1075

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg13670	Carg07862	Silver-seed gourd	carcarB563

The following block(s) are covering this gene:


Gene	Organism	Block
Carg13670	Cucurbita moschata (Rifu)	carcmoB1250