CSPI06G33200 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGCAGCAGGCTCAACCCAACACCATCACCAAGAACAAAGTGCATACAGAGCCTTGTGTTGTGGATGTTCTTGCAATTGCCGGTTGAGTTTTTCTTCTTCAGAAGAGACAGAAAGTTTCAATTCTGACAAATTCCCATCAGTTTCCAGCATCGCTCACGCTATGGTTCAAGAGAGACTCGAACAAATGATAAGGGAAAAACGAGAGGTAAGAAATGGTAAAGAAAGAAAGAAACAGAGGAGTGAAGATACCAAATTTGTTGTAATGGTGGCTATGGAGAAATGCTCTGACGATCCTAAAGAAGACTTCAGAGTTTCAATGACGGAAATGATTTTGGCTAATCGAATTGAAGAGCCAAAGGATCTACGTAATCTTTTGAACTACTATATCTCCATGAACTCAGATGAATGTCATGGTGTTATTTTTGAGGTATTTCATGAGGTTTGTAGCAATTTGTTTCTAGCTTGTAAACGCCATTGGTAGAGAAATTTAACATTTTAACATTCTTTTCACATGTTTAGTCTTGCTGTTCTTTACATTTCTAGAAAGAAGTTAGCAAGAATCCAAGAGACAACAGAATATTGAAAAGTAAACTGGAGTTCGATTGA ATGAAAGCAGCAGGCTCAACCCAACACCATCACCAAGAACAAAGTGCATACAGAGCCTTGTGTTGTGGATGTTCTTGCAATTGCCGGTTGAGTTTTTCTTCTTCAGAAGAGACAGAAAGTTTCAATTCTGACAAATTCCCATCAGTTTCCAGCATCGCTCACGCTATGGTTCAAGAGAGACTCGAACAAATGATAAGGGAAAAACGAGAGGTAAGAAATGGTAAAGAAAGAAAGAAACAGAGGAGTGAAGATACCAAATTTGTTGTAATGGTGGCTATGGAGAAATGCTCTGACGATCCTAAAGAAGACTTCAGAGTTTCAATGACGGAAATGATTTTGGCTAATCGAATTGAAGAGCCAAAGGATCTACGTAATCTTTTGAACTACTATATCTCCATGAACTCAGATGAATGTCATGGTGTTATTTTTGAGGTATTTCATGAGAAAGAAGTTAGCAAGAATCCAAGAGACAACAGAATATTGAAAAGTAAACTGGAGTTCGATTGA ATGAAAGCAGCAGGCTCAACCCAACACCATCACCAAGAACAAAGTGCATACAGAGCCTTGTGTTGTGGATGTTCTTGCAATTGCCGGTTGAGTTTTTCTTCTTCAGAAGAGACAGAAAGTTTCAATTCTGACAAATTCCCATCAGTTTCCAGCATCGCTCACGCTATGGTTCAAGAGAGACTCGAACAAATGATAAGGGAAAAACGAGAGGTAAGAAATGGTAAAGAAAGAAAGAAACAGAGGAGTGAAGATACCAAATTTGTTGTAATGGTGGCTATGGAGAAATGCTCTGACGATCCTAAAGAAGACTTCAGAGTTTCAATGACGGAAATGATTTTGGCTAATCGAATTGAAGAGCCAAAGGATCTACGTAATCTTTTGAACTACTATATCTCCATGAACTCAGATGAATGTCATGGTGTTATTTTTGAGGTATTTCATGAGAAAGAAGTTAGCAAGAATCCAAGAGACAACAGAATATTGAAAAGTAAACTGGAGTTCGATTGA
BLAST of CSPI06G33200 vs. Swiss-Prot
Match: OFP9_ARATH (Probable transcription repressor OFP9 OS=Arabidopsis thaliana GN=OFP9 PE=3 SV=2) HSP 1 Score: 106.7 bits (265), Expect = 2.6e-22 Identity = 60/112 (53.57%), Postives = 81/112 (72.32%), Query Frame = 1
BLAST of CSPI06G33200 vs. Swiss-Prot
Match: OFP5_ARATH (Transcription repressor OFP5 OS=Arabidopsis thaliana GN=OFP5 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 1
BLAST of CSPI06G33200 vs. Swiss-Prot
Match: OFP3_ARATH (Transcription repressor OFP3 OS=Arabidopsis thaliana GN=OFP3 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 4.7e-08 Identity = 36/84 (42.86%), Postives = 52/84 (61.90%), Query Frame = 1
BLAST of CSPI06G33200 vs. Swiss-Prot
Match: OFP6_ARATH (Transcription repressor OFP6 OS=Arabidopsis thaliana GN=OFP6 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.8e-07 Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = 1
BLAST of CSPI06G33200 vs. Swiss-Prot
Match: OFP8_ARATH (Transcription repressor OFP8 OS=Arabidopsis thaliana GN=OFP8 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.5e-06 Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 1
BLAST of CSPI06G33200 vs. TrEMBL
Match: A0A0A0KHR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G512880 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 2.7e-87 Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 1
BLAST of CSPI06G33200 vs. TrEMBL
Match: A0A061GGX8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030311 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 2.8e-44 Identity = 100/152 (65.79%), Postives = 123/152 (80.92%), Query Frame = 1
BLAST of CSPI06G33200 vs. TrEMBL
Match: A0A0D2TLZ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G182600 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 8.2e-44 Identity = 97/148 (65.54%), Postives = 118/148 (79.73%), Query Frame = 1
BLAST of CSPI06G33200 vs. TrEMBL
Match: V4UAL8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018040mg PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 6.5e-41 Identity = 98/153 (64.05%), Postives = 121/153 (79.08%), Query Frame = 1
BLAST of CSPI06G33200 vs. TrEMBL
Match: A0A067GSG1_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g040092mg PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 6.5e-41 Identity = 98/153 (64.05%), Postives = 121/153 (79.08%), Query Frame = 1
BLAST of CSPI06G33200 vs. TAIR10
Match: AT4G18830.1 (AT4G18830.1 ovate family protein 5) HSP 1 Score: 61.2 bits (147), Expect = 6.9e-10 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 1
BLAST of CSPI06G33200 vs. TAIR10
Match: AT5G58360.1 (AT5G58360.1 ovate family protein 3) HSP 1 Score: 59.3 bits (142), Expect = 2.6e-09 Identity = 36/84 (42.86%), Postives = 52/84 (61.90%), Query Frame = 1
BLAST of CSPI06G33200 vs. TAIR10
Match: AT2G36026.1 (AT2G36026.1 Ovate family protein) HSP 1 Score: 58.9 bits (141), Expect = 3.4e-09 Identity = 32/67 (47.76%), Postives = 39/67 (58.21%), Query Frame = 1
BLAST of CSPI06G33200 vs. TAIR10
Match: AT3G52525.1 (AT3G52525.1 ovate family protein 6) HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08 Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = 1
BLAST of CSPI06G33200 vs. TAIR10
Match: AT5G19650.1 (AT5G19650.1 ovate family protein 8) HSP 1 Score: 54.3 bits (129), Expect = 8.5e-08 Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 1
BLAST of CSPI06G33200 vs. NCBI nr
Match: gi|700193869|gb|KGN49073.1| (hypothetical protein Csa_6G512880 [Cucumis sativus]) HSP 1 Score: 329.3 bits (843), Expect = 3.9e-87 Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 1
BLAST of CSPI06G33200 vs. NCBI nr
Match: gi|590626546|ref|XP_007026199.1| (Uncharacterized protein TCM_030311 [Theobroma cacao]) HSP 1 Score: 186.4 bits (472), Expect = 4.0e-44 Identity = 100/152 (65.79%), Postives = 123/152 (80.92%), Query Frame = 1
BLAST of CSPI06G33200 vs. NCBI nr
Match: gi|823218352|ref|XP_012441836.1| (PREDICTED: probable transcription repressor OFP9 [Gossypium raimondii]) HSP 1 Score: 184.9 bits (468), Expect = 1.2e-43 Identity = 97/148 (65.54%), Postives = 118/148 (79.73%), Query Frame = 1
BLAST of CSPI06G33200 vs. NCBI nr
Match: gi|641859687|gb|KDO78377.1| (hypothetical protein CISIN_1g040092mg, partial [Citrus sinensis]) HSP 1 Score: 175.3 bits (443), Expect = 9.3e-41 Identity = 98/153 (64.05%), Postives = 121/153 (79.08%), Query Frame = 1
BLAST of CSPI06G33200 vs. NCBI nr
Match: gi|567915007|ref|XP_006449817.1| (hypothetical protein CICLE_v10018040mg [Citrus clementina]) HSP 1 Score: 175.3 bits (443), Expect = 9.3e-41 Identity = 98/153 (64.05%), Postives = 121/153 (79.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|