Cucsa.362900 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.362900
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRNA-binding domain, putative
Locationscaffold03611 : 593301 .. 596750 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTATCTTATGGATGGACAAGAGAACATACTTGAGGCCATATATGAAGACGATAAGTTGGAAAATGATGATGTTGAAATGGCCGATGTGGAGGAAGGGGAGTTCATTGACGACAATATCAATATAGAGAAAAGCAGTTTTACAGATGTCCAAGCACCAAGTACGGATCAGAGAAGTAAAAATCGTAAACATCGGACAAAGAAAAAGAAGAACAAAAGAAAGTCAAGCGAGCCAGGTTCAAATGGCACTGATATAAACAGGTTACGTGGAATCTTCTAATCATGTTGTATATGCAATTGCATGGAAAAAGAAGCAATATTGCAAGCTTTCTTGAGATGCGTTTTTTGTTTGGAAATCCATTATAGTTTTGCCAAGTAATTGTAGATTTAACAGGACTTTTTACTCTGGTTGCTATGTTATTGTGCTGATTTCCGTGTTTTCTCAGGTTTGTGTTGAATGCATGCAGACTTTTGAAAGAGAAAAAATCGTACATGGTGTACACTGCTGTAGGTTGTCTTGGAGTCTCTGCATTAAGCGAACTTATCAAAGAGGTATTATGATTTTCTTGTAACCTGATAAAAGAATATTTTGTTTGATTGAGTGATAAAAAATTATGTCTTATACATTAGTATTAGTTTGAAAACTTCCCTTCTGTTTTTTAAAGTTCTGTTTGAAAGTGAATTGAATTGACCAGCCACTAACCAAACCAACATAATTGAGTTCCATCGGTTTTCCCTTTTGGTTTGCATTCAGCCCCCTAGTGAGTACAACTCATGAATTATTTTACTGTTCACTAACTATGCCTTTGCTCACTACTTTTTGTATCCTCGGTACTTTGCCTAGGGCCACAAGCAATTGCCTTCCTGGTAAAAGTGAATTTCTTTAACTTAAATTTTGAGTTTTGACTGACCTGCCTAGACATGGCCATTCACGTTGGAAATGACTTGTGGGCTTGGGCTCATAAGCAAAGAACAAGACTCATAAGCAAAGTACATCGATTTTGTCCAACATTGGAGAATTTTGAAATACCAAGAGGGTATAAAATACCAAGGTATGTTAGGTGTGAGACTAAAGTATTTTGGTGGTGATAGCATAACTCTATCACCACAAGCGCGCCTTAGTATGTCAGGTCGGATAACCGCGCTTGTGCGAAAAAGAATCAACTTTTTATTTTCTATACGTTTGATTTTATAACTCCTATTTGGCAATTAAACATTTTGCTTTTTACAATTAATATTTTTCTCCGTTTCCTACCTGTTGGAAAACCCTACCTGGCCGTTTTCTTTTCTTCCTCTTTATCTATCATCATCTTAATCCAGATTTGGGTATCCGAAAACCATCTACTCTCTGTTCTTTAATCTTGTTCTTGATCTTGATTCTATTCCTTGTTCCGACGAGTGCACGTCGAAATAAGGAAGCTATGTTAACCTTGAGGAGCAACCGGCATTTGATTGGCACCACGGTTGTGCCAAAATTGCTTTCAAGGTAGTTGTTCGTCACAGCGCAGCAATTCCTTTTGAAATCTTATTAACAACAATTCACTCCAAACTCCAGTAAGTATCATACCACACAGCCACTCTTCATATTTAATCAGTATTATTTCCTACCCTTGCAGATTCTGTTGCTGAAGTCATTTTGCTCCTTTTAACCTTGTTCTCTGAGCTGTGAATCACCATTGCTGGACTACTACATCTGTGCTATATAAGTTGATGCTATTATCCCAGCATATATTGGTTATGATCTCTGTAAGATATTTGTACTTTATTACAAAAAAAACCTTTAGTATTAATCGCAATTTACAATCAATCTTTTCCACCCACTTCCCTGAAAATACTACACCTGATTATTTTCACTGAATCCGGACTTCGTCAAAATGCTCTTGGAAGTTTTAACATGTACATTTAATTGGAATGCCCAAACTAAATTTGCAGCTCAGTTGTGCATGTCCTATCATACTTTTCATCTTGGGGTTTGAGATTTGCTTTCATGCGAACTCTTGAAAATCTGTTCACTTTTAAAAATTTATAACCGTTTGTCAAATTCTTTATATGCAGAAGAGCCCTTGCCTTGCTTTTCCCCTTTGAGTTACTGATGATGCTTAACTAGAGATAGGCAGCATAGTTAATCAATGGTTGATTTTGCTTGTAATTGTTTTAGCATTTTTCTTCTTTTACAATACGACACCCTATGATCTTATGTGCACAAGTTGACATGTCGGAATACCAGGTCAATGCAGTTCAAGCTTGTGGAGGTCAGATGACTGCAGATGGCAGGCGCTTTCGGACGGGAGGTGGCATATTATGGAGCATCATCAAAACCCGGGAACCAAATGCCTACAAAGAGATAATGAAACGTGCAAAAGAGTTTGAGGTATTTAACAAGACCCTTGTGACATACTTTATAACTCGAAAAACCTTTACGTGTTTTTTCCTTTATTCTTATTAAAATAAGTGCTATTCTTATTTTGGCCACATAAAAAAAAATACTATCAATATTCCTAGAGGACACTTCTAAAATTTTTCATTGTGAAGACAAACTTTTTCATCTTTTCAAACCTTTGATTTTATTCAGAGTGGGCTCAGTTTCCTAAGCCTGTTTCTAACGTTTGAAATTGCTGAGCTTATTTACTCTCTGTTTTCTTTCTTTTGGATTTTAATTGTATTTTGAAGAGTTGAACACGTACTTTTGAAGTATTGTAAACTCCGTCTCACAGTATAAGAAGTTAGGCATAAGATTGTTGTTTTCTAGTCATGGGATGCTCAAACTCCTTTGGCCAAACAAGGTGTAGAGTTCACAACCCTGTTTTCCCAACTACTTGCAGCAAGCACCCCCTCTGATGTTAGAATAGAAAATGCGTTGGAGTGAAATTCTGTATGATCCTATCGTGATGTTGTTCCTTCATTAGTTATTTCGTATTATACATATTTTTGTTACTTTCATGATGGTGCAGAAACAATTTAAGCAACCAAATGTGAGAAGGGAGGCTACAGAAACTGAGAAAGAAAGTTCTCAAAAAGTTCCTCACCTTTTCTCTGAAGGATCTTCTAGAAATCTGCCAGATCACGTCCAAAGCTTTTCTTCAGAGCTGAATCAATCTAAGGAATCAAATTCCGAAGAAAAACTGTCTTCTATTCACGATAGATTAAGAGTACCAGTTTCATATGATGATGACCTCCTTCAAGAAAATCCGAAAGAGGAAGATACAACTGACTGTAGATAGGTTTTCCCATTTTTTTGAACAATTGCTGTTGGTTTTTAGTTCGTGTCTAACCAAATCAACAGTTTTTACCTCCAAAACATGAGGCAGAAGAATGTTCTATAAGCTGAGTTTGTTACTTTCATTTTCAGTGCCTTTTTGTTTTAGGCTGCTTTGGTTGAGTGCCTGCTTGTTCAGATGAGGTTGGAATTAGCCACATGGAAACAAATTGGATTTATTGGTTGTAAATGGGAAA

mRNA sequence

GTATCTTATGGATGGACAAGAGAACATACTTGAGGCCATATATGAAGACGATAAGTTGGAAAATGATGATGTTGAAATGGCCGATGTGGAGGAAGGGGAGTTCATTGACGACAATATCAATATAGAGAAAAGCAGTTTTACAGATGTCCAAGCACCAAGTACGGATCAGAGAAGTAAAAATCGTAAACATCGGACAAAGAAAAAGAAGAACAAAAGAAAGTCAAGCGAGCCAGGTTCAAATGGCACTGATATAAACAGGTTTGTGTTGAATGCATGCAGACTTTTGAAAGAGAAAAAATCGTACATGGTGTACACTGCTGTAGGTTGTCTTGGAGTCTCTGCATTAAGCGAACTTATCAAAGAGGTCAATGCAGTTCAAGCTTGTGGAGGTCAGATGACTGCAGATGGCAGGCGCTTTCGGACGGGAGGTGGCATATTATGGAGCATCATCAAAACCCGGGAACCAAATGCCTACAAAGAGATAATGAAACGTGCAAAAGAGTTTGAGAAACAATTTAAGCAACCAAATGTGAGAAGGGAGGCTACAGAAACTGAGAAAGAAAGTTCTCAAAAAGTTCCTCACCTTTTCTCTGAAGGATCTTCTAGAAATCTGCCAGATCACGTCCAAAGCTTTTCTTCAGAGCTGAATCAATCTAAGGAATCAAATTCCGAAGAAAAACTGTCTTCTATTCACGATAGATTAAGAGTACCAGTTTCATATGATGATGACCTCCTTCAAGAAAATCCGAAAGAGGAAGATACAACTGACTGTAGATAGGTTTTCCCATTTTTTTGAACAATTGCTGTTGGTTTTTAGTTCGTGTCTAACCAAATCAACAGTTTTTACCTCCAAAACATGAGGCAGAAGAATGTTCTATAAGCTGAGTTTGTTACTTTCATTTTCAGTGCCTTTTTGTTTTAGGCTGCTTTGGTTGAGTGCCTGCTTGTTCAGATGAGGTTGGAATTAGCCACATGGAAACAAATTGGATTTATTGGTTGTAAATGGGAAA

Coding sequence (CDS)

ATGGATGGACAAGAGAACATACTTGAGGCCATATATGAAGACGATAAGTTGGAAAATGATGATGTTGAAATGGCCGATGTGGAGGAAGGGGAGTTCATTGACGACAATATCAATATAGAGAAAAGCAGTTTTACAGATGTCCAAGCACCAAGTACGGATCAGAGAAGTAAAAATCGTAAACATCGGACAAAGAAAAAGAAGAACAAAAGAAAGTCAAGCGAGCCAGGTTCAAATGGCACTGATATAAACAGGTTTGTGTTGAATGCATGCAGACTTTTGAAAGAGAAAAAATCGTACATGGTGTACACTGCTGTAGGTTGTCTTGGAGTCTCTGCATTAAGCGAACTTATCAAAGAGGTCAATGCAGTTCAAGCTTGTGGAGGTCAGATGACTGCAGATGGCAGGCGCTTTCGGACGGGAGGTGGCATATTATGGAGCATCATCAAAACCCGGGAACCAAATGCCTACAAAGAGATAATGAAACGTGCAAAAGAGTTTGAGAAACAATTTAAGCAACCAAATGTGAGAAGGGAGGCTACAGAAACTGAGAAAGAAAGTTCTCAAAAAGTTCCTCACCTTTTCTCTGAAGGATCTTCTAGAAATCTGCCAGATCACGTCCAAAGCTTTTCTTCAGAGCTGAATCAATCTAAGGAATCAAATTCCGAAGAAAAACTGTCTTCTATTCACGATAGATTAAGAGTACCAGTTTCATATGATGATGACCTCCTTCAAGAAAATCCGAAAGAGGAAGATACAACTGACTGTAGATAG

Protein sequence

MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSYDDDLLQENPKEEDTTDCR*
Homology
[Close]
BLAST of Cucsa.362900 vs. TrEMBL
Match: A0A0A0KBJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G076770 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 4.5e-142
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1 

Query: 1   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 60
           MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 4   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 63

Query: 61  HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV 120
           HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 64  HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV 123

Query: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT 180
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT
Sbjct: 124 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT 183

Query: 181 ETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSYDD 240
           ETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSYDD
Sbjct: 184 ETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSYDD 243

Query: 241 DLLQENPKEEDTTDCR 257
           DLLQENPKEEDTTDCR
Sbjct: 244 DLLQENPKEEDTTDCR 259

[Close]
BLAST of Cucsa.362900 vs. TrEMBL
Match: K7KI57_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G049800 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.1e-76
Identity = 151/254 (59.45%), Postives = 186/254 (73.23%), Query Frame = 1 

Query: 1   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNIN--IEKSSFTDVQAPSTDQRSKN 60
           M+  +NIL+AIYE+D L+ DDV+M DVEEGE ++ +    + +SS  D+   + +  SKN
Sbjct: 1   MEDGDNILDAIYEEDNLD-DDVDMVDVEEGELVEPDAQNVLGQSSAGDINEANQEPLSKN 60

Query: 61  RKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIK 120
           +K R  KKKNK+K    GSN  DINRFVL+ CR LKEKKSYMVYTAVGCLGVSALS+L+ 
Sbjct: 61  QKRRANKKKNKKKRKGSGSNAMDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSDLVN 120

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRRE 180
           EV+A+QACGGQ TADGRRFRTGGGILWSI+K REP  +KEIMK+AKEFEKQF+QPNV + 
Sbjct: 121 EVDAIQACGGQKTADGRRFRTGGGILWSILKVREPKVFKEIMKKAKEFEKQFRQPNVMQR 180

Query: 181 ATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSY 240
               +++SSQ VP  FS     N+ D     S   NQ + + SEEK  S+HDRLR+PVSY
Sbjct: 181 PASKKEDSSQGVPFSFSGRDLGNVSDSDILASQMQNQHQPATSEEKPMSVHDRLRIPVSY 240

Query: 241 DDDLLQENPKEEDT 253
           DDDLL ENP  + T
Sbjct: 241 DDDLLGENPVNDTT 253

[Close]
BLAST of Cucsa.362900 vs. TrEMBL
Match: A0A0B2RCY1_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_016360 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 4.3e-76
Identity = 152/254 (59.84%), Postives = 187/254 (73.62%), Query Frame = 1 

Query: 1   MDGQENILEAIYEDDKLENDDVEMADVEEGEFID-DNINI-EKSSFTDVQAPSTDQRSKN 60
           M+  +NIL+AIYE+D L+ DDV+M DVEEGE ++ D+ N+  +SS  D+   + +  SKN
Sbjct: 1   MEDGDNILDAIYEEDNLD-DDVDMVDVEEGELVEPDSQNVLGQSSAGDINEANQEPLSKN 60

Query: 61  RKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIK 120
           +K R  KKKNK+K    GSN  DINRFVL+ CR LKEKKSYMVYTAVGCLGVSALS+L+ 
Sbjct: 61  QKRRANKKKNKKKRKGSGSNAMDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSDLVN 120

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRRE 180
           EV+A+QACGGQ TADGRRFRTGGGILWSI+K REP  +KEIMK+AKEFEKQF+QP V + 
Sbjct: 121 EVDAIQACGGQKTADGRRFRTGGGILWSILKVREPKVFKEIMKKAKEFEKQFRQPTVMQR 180

Query: 181 ATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSY 240
               +++SSQ VP  FS     N+ D     S   NQ + + SEEK  S+HDRLR+PVSY
Sbjct: 181 PASKKEDSSQGVPFSFSGRDLGNVSDSDILASQMQNQHQPATSEEKPMSVHDRLRIPVSY 240

Query: 241 DDDLLQENPKEEDT 253
           DDDLL ENP  + T
Sbjct: 241 DDDLLGENPVNDTT 253

[Close]
BLAST of Cucsa.362900 vs. TrEMBL
Match: A0A0B2RCT3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_035314 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.8e-75
Identity = 152/254 (59.84%), Postives = 186/254 (73.23%), Query Frame = 1 

Query: 1   MDGQENILEAIYEDDKLENDDVEMADVEEGEFID-DNINI-EKSSFTDVQAPSTDQRSKN 60
           M+  +NIL+AIYE+D L+ DDV+M DVEEGE ++ D+ N+  +SS  D+  P+ +  SKN
Sbjct: 1   MEDGDNILDAIYEEDTLD-DDVDMVDVEEGELVEPDSQNVLGQSSAGDINEPNQEPLSKN 60

Query: 61  RKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIK 120
           +K R  KKKNK+K    GSN  DINRFVL+ CR LKEKKSYMVYTAVGCLGVSALS+L+ 
Sbjct: 61  QKRRANKKKNKKKRKGSGSNAMDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSDLVN 120

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRRE 180
           EV+A+Q CGGQ TADGRRFRTGGGILWSI+K REP  YKEI+K+AKEFEKQF+QPNV + 
Sbjct: 121 EVDAIQTCGGQKTADGRRFRTGGGILWSILKVREPKVYKEIIKKAKEFEKQFRQPNVMQR 180

Query: 181 ATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSY 240
               +++SSQ VP  FS     N+ D     S   NQ + +  EEK  S HDRLR+PVSY
Sbjct: 181 PVPKKEDSSQGVPVSFSGRDLGNVSDSNILASQMQNQHQPATLEEKPVSAHDRLRIPVSY 240

Query: 241 DDDLLQENPKEEDT 253
           DDDLL ENP  + T
Sbjct: 241 DDDLLGENPINDAT 253

[Close]
BLAST of Cucsa.362900 vs. TrEMBL
Match: I1K8B7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G050800 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.8e-75
Identity = 152/254 (59.84%), Postives = 186/254 (73.23%), Query Frame = 1 

Query: 1   MDGQENILEAIYEDDKLENDDVEMADVEEGEFID-DNINI-EKSSFTDVQAPSTDQRSKN 60
           M+  +NIL+AIYE+D L+ DDV+M DVEEGE ++ D+ N+  +SS  D+  P+ +  SKN
Sbjct: 1   MEDGDNILDAIYEEDTLD-DDVDMVDVEEGELVEPDSQNVLGQSSAGDINEPNQEPLSKN 60

Query: 61  RKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIK 120
           +K R  KKKNK+K    GSN  DINRFVL+ CR LKEKKSYMVYTAVGCLGVSALS+L+ 
Sbjct: 61  QKRRANKKKNKKKRKGSGSNAMDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSDLVN 120

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRRE 180
           EV+A+Q CGGQ TADGRRFRTGGGILWSI+K REP  YKEI+K+AKEFEKQF+QPNV + 
Sbjct: 121 EVDAIQTCGGQKTADGRRFRTGGGILWSILKVREPKVYKEIIKKAKEFEKQFRQPNVMQR 180

Query: 181 ATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSY 240
               +++SSQ VP  FS     N+ D     S   NQ + +  EEK  S HDRLR+PVSY
Sbjct: 181 PVPKKEDSSQGVPVSFSGRDLGNVSDSNILASQMQNQHQPATLEEKPVSAHDRLRIPVSY 240

Query: 241 DDDLLQENPKEEDT 253
           DDDLL ENP  + T
Sbjct: 241 DDDLLGENPINDAT 253

[Close]
BLAST of Cucsa.362900 vs. TAIR10
Match: AT3G20430.1 (AT3G20430.1 Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro:IPR019385))

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-54
Identity = 116/264 (43.94%), Postives = 169/264 (64.02%), Query Frame = 1 

Query: 1   MDGQENILEAIYEDDKLEN-DDVEMADVEEGEFIDDNI-------NIEKSSFTDVQAPST 60
           M+G+E++L+AI E+D  EN +DVEM DVEEGE + D+        N +     D +A   
Sbjct: 1   MEGEESLLDAINEEDGFENLEDVEMVDVEEGEIVVDHDLDSGERQNDDGDGVKDKEAILG 60

Query: 61  DQRSKNRKHRTKKKKNKRKSSEPGSNGT-DINRFVLNACRLLKEKKSYMVYTAVGCLGVS 120
           ++    + ++ K+KK K+K   P  +    ++ FV + CR LKEKKSYM+YTAVGCLG++
Sbjct: 61  EKNGLQQTNKNKRKKKKKKRKGPVMDKPMSVDWFVRDTCRRLKEKKSYMIYTAVGCLGIA 120

Query: 121 ALSELIKEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFK 180
           ALS+L+ EV A++ CGGQ+TADG R RT GG+LW+IIK R+P AY+EIMK+ KEFEKQF+
Sbjct: 121 ALSDLVNEVVAIETCGGQVTADGTRKRTSGGVLWNIIKARQPEAYREIMKKTKEFEKQFR 180

Query: 181 QPNVRREATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSEL-----NQSKESNSEEKLS 240
           QPN R ++     + S       SEG +       ++  SE+      +  ES  E++  
Sbjct: 181 QPNTRPKSGPKRDQGSS------SEGLASGNVSADEALVSEMCVMPVAEQTESKPEKERK 240

Query: 241 SIHDRLRVPVSYDDDLLQENPKEE 251
           S+H+R+RVPVSY DDL ++ P ++
Sbjct: 241 SVHERIRVPVSY-DDLFRDAPLDD 257

[Close]
BLAST of Cucsa.362900 vs. NCBI nr
Match: gi|449454508|ref|XP_004144996.1| (PREDICTED: uncharacterized protein LOC101205280 [Cucumis sativus])

HSP 1 Score: 511.9 bits (1317), Expect = 6.4e-142
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1 

Query: 1   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 60
           MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 4   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 63

Query: 61  HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV 120
           HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 64  HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV 123

Query: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT 180
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT
Sbjct: 124 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT 183

Query: 181 ETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSYDD 240
           ETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSYDD
Sbjct: 184 ETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSYDD 243

Query: 241 DLLQENPKEEDTTDCR 257
           DLLQENPKEEDTTDCR
Sbjct: 244 DLLQENPKEEDTTDCR 259

[Close]
BLAST of Cucsa.362900 vs. NCBI nr
Match: gi|659120327|ref|XP_008460135.1| (PREDICTED: uncharacterized protein LOC103499036 [Cucumis melo])

HSP 1 Score: 474.9 bits (1221), Expect = 8.7e-131
Identity = 240/254 (94.49%), Postives = 246/254 (96.85%), Query Frame = 1 

Query: 1   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 60
           MDGQENILEAIYE D+ ENDDVEMADVEEGEFID NINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60

Query: 61  HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV 120
            RTKKKKNKRKSSEPGSNGTDINRFVL+ACR LKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

Query: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT 180
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+RREA 
Sbjct: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAR 180

Query: 181 ETEKESSQKVPHLFSE-GSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSYD 240
           ETEKESSQKVPHLFSE GSSRNLPDHVQSF+SELN+SKESNSEEK SSIHDRLRVP+SYD
Sbjct: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240

Query: 241 DDLLQENPKEEDTT 254
           DDLLQENPKEEDTT
Sbjct: 241 DDLLQENPKEEDTT 254

[Close]
BLAST of Cucsa.362900 vs. NCBI nr
Match: gi|356509811|ref|XP_003523639.1| (PREDICTED: uncharacterized protein LOC100793038 [Glycine max])

HSP 1 Score: 294.7 bits (753), Expect = 1.6e-76
Identity = 151/254 (59.45%), Postives = 186/254 (73.23%), Query Frame = 1 

Query: 1   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNIN--IEKSSFTDVQAPSTDQRSKN 60
           M+  +NIL+AIYE+D L+ DDV+M DVEEGE ++ +    + +SS  D+   + +  SKN
Sbjct: 1   MEDGDNILDAIYEEDNLD-DDVDMVDVEEGELVEPDAQNVLGQSSAGDINEANQEPLSKN 60

Query: 61  RKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIK 120
           +K R  KKKNK+K    GSN  DINRFVL+ CR LKEKKSYMVYTAVGCLGVSALS+L+ 
Sbjct: 61  QKRRANKKKNKKKRKGSGSNAMDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSDLVN 120

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRRE 180
           EV+A+QACGGQ TADGRRFRTGGGILWSI+K REP  +KEIMK+AKEFEKQF+QPNV + 
Sbjct: 121 EVDAIQACGGQKTADGRRFRTGGGILWSILKVREPKVFKEIMKKAKEFEKQFRQPNVMQR 180

Query: 181 ATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSY 240
               +++SSQ VP  FS     N+ D     S   NQ + + SEEK  S+HDRLR+PVSY
Sbjct: 181 PASKKEDSSQGVPFSFSGRDLGNVSDSDILASQMQNQHQPATSEEKPMSVHDRLRIPVSY 240

Query: 241 DDDLLQENPKEEDT 253
           DDDLL ENP  + T
Sbjct: 241 DDDLLGENPVNDTT 253

[Close]
BLAST of Cucsa.362900 vs. NCBI nr
Match: gi|734396442|gb|KHN29738.1| (hypothetical protein glysoja_016360 [Glycine soja])

HSP 1 Score: 292.7 bits (748), Expect = 6.1e-76
Identity = 152/254 (59.84%), Postives = 187/254 (73.62%), Query Frame = 1 

Query: 1   MDGQENILEAIYEDDKLENDDVEMADVEEGEFID-DNINI-EKSSFTDVQAPSTDQRSKN 60
           M+  +NIL+AIYE+D L+ DDV+M DVEEGE ++ D+ N+  +SS  D+   + +  SKN
Sbjct: 1   MEDGDNILDAIYEEDNLD-DDVDMVDVEEGELVEPDSQNVLGQSSAGDINEANQEPLSKN 60

Query: 61  RKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIK 120
           +K R  KKKNK+K    GSN  DINRFVL+ CR LKEKKSYMVYTAVGCLGVSALS+L+ 
Sbjct: 61  QKRRANKKKNKKKRKGSGSNAMDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSDLVN 120

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRRE 180
           EV+A+QACGGQ TADGRRFRTGGGILWSI+K REP  +KEIMK+AKEFEKQF+QP V + 
Sbjct: 121 EVDAIQACGGQKTADGRRFRTGGGILWSILKVREPKVFKEIMKKAKEFEKQFRQPTVMQR 180

Query: 181 ATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSY 240
               +++SSQ VP  FS     N+ D     S   NQ + + SEEK  S+HDRLR+PVSY
Sbjct: 181 PASKKEDSSQGVPFSFSGRDLGNVSDSDILASQMQNQHQPATSEEKPMSVHDRLRIPVSY 240

Query: 241 DDDLLQENPKEEDT 253
           DDDLL ENP  + T
Sbjct: 241 DDDLLGENPVNDTT 253

[Close]
BLAST of Cucsa.362900 vs. NCBI nr
Match: gi|356518153|ref|XP_003527746.1| (PREDICTED: uncharacterized protein LOC100805103 [Glycine max])

HSP 1 Score: 290.0 bits (741), Expect = 4.0e-75
Identity = 152/254 (59.84%), Postives = 186/254 (73.23%), Query Frame = 1 

Query: 1   MDGQENILEAIYEDDKLENDDVEMADVEEGEFID-DNINI-EKSSFTDVQAPSTDQRSKN 60
           M+  +NIL+AIYE+D L+ DDV+M DVEEGE ++ D+ N+  +SS  D+  P+ +  SKN
Sbjct: 1   MEDGDNILDAIYEEDTLD-DDVDMVDVEEGELVEPDSQNVLGQSSAGDINEPNQEPLSKN 60

Query: 61  RKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIK 120
           +K R  KKKNK+K    GSN  DINRFVL+ CR LKEKKSYMVYTAVGCLGVSALS+L+ 
Sbjct: 61  QKRRANKKKNKKKRKGSGSNAMDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSDLVN 120

Query: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRRE 180
           EV+A+Q CGGQ TADGRRFRTGGGILWSI+K REP  YKEI+K+AKEFEKQF+QPNV + 
Sbjct: 121 EVDAIQTCGGQKTADGRRFRTGGGILWSILKVREPKVYKEIIKKAKEFEKQFRQPNVMQR 180

Query: 181 ATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVSY 240
               +++SSQ VP  FS     N+ D     S   NQ + +  EEK  S HDRLR+PVSY
Sbjct: 181 PVPKKEDSSQGVPVSFSGRDLGNVSDSNILASQMQNQHQPATLEEKPVSAHDRLRIPVSY 240

Query: 241 DDDLLQENPKEEDT 253
           DDDLL ENP  + T
Sbjct: 241 DDDLLGENPINDAT 253

The following BLAST results are available for this feature:
BLAST of Cucsa.362900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBJ7_CUCSA4.5e-142100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G076770 PE=4 SV=1[more]
K7KI57_SOYBN1.1e-7659.45Uncharacterized protein OS=Glycine max GN=GLYMA_04G049800 PE=4 SV=1[more]
A0A0B2RCY1_GLYSO4.3e-7659.84Uncharacterized protein OS=Glycine soja GN=glysoja_016360 PE=4 SV=1[more]
A0A0B2RCT3_GLYSO2.8e-7559.84Uncharacterized protein OS=Glycine soja GN=glysoja_035314 PE=4 SV=1[more]
I1K8B7_SOYBN2.8e-7559.84Uncharacterized protein OS=Glycine max GN=GLYMA_06G050800 PE=4 SV=1[more]
BLAST of Cucsa.362900 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G20430.11.4e-5443.94 Phosphorylated adapter RNA export protein, RNA-binding domain (Inter... [more]
BLAST of Cucsa.362900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449454508|ref|XP_004144996.1|6.4e-142100.00PREDICTED: uncharacterized protein LOC101205280 [Cucumis sativus][more]
gi|659120327|ref|XP_008460135.1|8.7e-13194.49PREDICTED: uncharacterized protein LOC103499036 [Cucumis melo][more]
gi|356509811|ref|XP_003523639.1|1.6e-7659.45PREDICTED: uncharacterized protein LOC100793038 [Glycine max][more]
gi|734396442|gb|KHN29738.1|6.1e-7659.84hypothetical protein glysoja_016360 [Glycine soja][more]
gi|356518153|ref|XP_003527746.1|4.0e-7559.84PREDICTED: uncharacterized protein LOC100805103 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019385PHAX_RNA-binding_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006408 snRNA export from nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.362900.1Cucsa.362900.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019385Phosphorylated adapter RNA export protein, RNA-binding domainPFAMPF10258RNA_GG_bindcoord: 89..164
score: 1.1
NoneNo IPR availablePANTHERPTHR13135CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26coord: 5..256
score: 4.0
NoneNo IPR availablePANTHERPTHR13135:SF0PHOSPHORYLATED ADAPTER RNA EXPORT PROTEINcoord: 5..256
score: 4.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.362900Cla006949Watermelon (97103) v1cgywmB666
Cucsa.362900Csa6G076770Cucumber (Chinese Long) v2cgycuB511
Cucsa.362900MELO3C022510Melon (DHL92) v3.5.1cgymeB586
Cucsa.362900ClCG06G000280Watermelon (Charleston Gray)cgywcgB620
Cucsa.362900CSPI06G05760Wild cucumber (PI 183967)cgycpiB540
Cucsa.362900CmaCh17G000240Cucurbita maxima (Rimu)cgycmaB0998
Cucsa.362900CmoCh17G000250Cucurbita moschata (Rifu)cgycmoB0999
Cucsa.362900Lsi09G019070Bottle gourd (USVL1VR-Ls)cgylsiB583
Cucsa.362900Cp4.1LG12g00220Cucurbita pepo (Zucchini)cgycpeB0947
Cucsa.362900MELO3C022510.2Melon (DHL92) v3.6.1cgymedB586
Cucsa.362900CsaV3_6G006070Cucumber (Chinese Long) v3cgycucB556
Cucsa.362900Bhi12G002294Wax gourdcgywgoB726
Cucsa.362900Carg10209Silver-seed gourdcarcgyB0271
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.362900Melon (DHL92) v3.6.1cgymedB591
Cucsa.362900Melon (DHL92) v3.6.1cgymedB592
Cucsa.362900Silver-seed gourdcarcgyB0695
Cucsa.362900Silver-seed gourdcarcgyB1193
Cucsa.362900Cucumber (Chinese Long) v3cgycucB552
Cucsa.362900Cucumber (Chinese Long) v3cgycucB553
Cucsa.362900Cucumber (Chinese Long) v3cgycucB555
Cucsa.362900Watermelon (97103) v2cgywmbB620
Cucsa.362900Watermelon (97103) v2cgywmbB621
Cucsa.362900Watermelon (97103) v2cgywmbB622
Cucsa.362900Watermelon (97103) v2cgywmbB625
Cucsa.362900Wax gourdcgywgoB727
Cucsa.362900Cucumber (Gy14) v1cgycgyB130
Cucsa.362900Cucumber (Gy14) v1cgycgyB132
Cucsa.362900Cucumber (Gy14) v1cgycgyB142
Cucsa.362900Cucurbita maxima (Rimu)cgycmaB0990
Cucsa.362900Cucurbita maxima (Rimu)cgycmaB0994
Cucsa.362900Cucurbita maxima (Rimu)cgycmaB0996
Cucsa.362900Cucurbita maxima (Rimu)cgycmaB1007
Cucsa.362900Cucurbita maxima (Rimu)cgycmaB1013
Cucsa.362900Cucurbita moschata (Rifu)cgycmoB0992
Cucsa.362900Cucurbita moschata (Rifu)cgycmoB1007
Cucsa.362900Cucurbita moschata (Rifu)cgycmoB0997
Cucsa.362900Cucurbita moschata (Rifu)cgycmoB1013
Cucsa.362900Wild cucumber (PI 183967)cgycpiB536
Cucsa.362900Wild cucumber (PI 183967)cgycpiB537
Cucsa.362900Wild cucumber (PI 183967)cgycpiB539
Cucsa.362900Cucumber (Chinese Long) v2cgycuB509
Cucsa.362900Melon (DHL92) v3.5.1cgymeB585
Cucsa.362900Melon (DHL92) v3.5.1cgymeB593
Cucsa.362900Melon (DHL92) v3.5.1cgymeB594
Cucsa.362900Watermelon (Charleston Gray)cgywcgB617
Cucsa.362900Watermelon (97103) v1cgywmB662
Cucsa.362900Watermelon (97103) v1cgywmB663
Cucsa.362900Cucurbita pepo (Zucchini)cgycpeB0954
Cucsa.362900Cucurbita pepo (Zucchini)cgycpeB0965
Cucsa.362900Cucurbita pepo (Zucchini)cgycpeB0969
Cucsa.362900Bottle gourd (USVL1VR-Ls)cgylsiB585
Cucsa.362900Bottle gourd (USVL1VR-Ls)cgylsiB587