Cucsa.359300 (gene) Cucumber (Gy14) v1

NameCucsa.359300
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPentatricopeptide repeat-containing protein family
Locationscaffold03588 : 274514 .. 275344 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTCACATTAATGGCCCAATAGAAAAATACATGAATAGGCCCAAGCCCAAATTCCACTAATATTCGATTTCCCCCAAATCTCAGCAAGGGTATTACAGTCATTGCGAAAAAAAAGAAACCCAATCTCCACATCGCCATGGCTTCTTCTCTTCACTCCACATTTCTCAAATCCCAAATCTCAATTCCGATCCCCGCCTCCACCGCTACATCCCCGGTCGCCGTTTCCTTTCGAGTACGGTGCGGCCCACGGGACAACCGAGGACCGCTAGTGAAAGGCAGAACCCTAAGCATCGAAGCAATCCAAGCAATTCAATCCCTAAAACGGGCCGAGAGATCCGACCCGACGAAGCTCCAACAAGTCCTCTCCACTACACTCTCCCGGCTGCTCAAAGCCGACCTTGTCGCCACCTTAAAGGAACTCCTCCGGCAGGAACGGTGCGCCCTAGCCTTGGAGGTTTTCGCCGTAATCAAATCGGAGTACCGTGCCGAATTGGGACTGTACGCGGAGGTGGCAGCGGCGCTGTCGAGGAACGGAGCGGCAGAGGAAATCGACCGACTGGTTAGCGATTTAGACGGCGGAGATGGAGTGATTGAGTGGGGGGATGATGATAAGGGTTTGATTAAGTTGATTAAGGCGGTGATTAGTGGGAATAGAAGGGAATCGACGGTCAGGATTTATCGGATGATGAGGAGGAAGGGTTGGGGATCGATGATTAAAGCTGATGATTATATGATTAAGGTTTTAAGTAAGGGTTTAAGGAGGCTTGGGGAAATAGAGTTGGCTGATGAGATAAATAGGGAATTTGAAGACTTAGTGGGCAGTTTTTGA

mRNA sequence

TTTTTCACATTAATGGCCCAATAGAAAAATACATGAATAGGCCCAAGCCCAAATTCCACTAATATTCGATTTCCCCCAAATCTCAGCAAGGGTATTACAGTCATTGCGAAAAAAAAGAAACCCAATCTCCACATCGCCATGGCTTCTTCTCTTCACTCCACATTTCTCAAATCCCAAATCTCAATTCCGATCCCCGCCTCCACCGCTACATCCCCGGTCGCCGTTTCCTTTCGAGTACGGTGCGGCCCACGGGACAACCGAGGACCGCTAGTGAAAGGCAGAACCCTAAGCATCGAAGCAATCCAAGCAATTCAATCCCTAAAACGGGCCGAGAGATCCGACCCGACGAAGCTCCAACAAGTCCTCTCCACTACACTCTCCCGGCTGCTCAAAGCCGACCTTGTCGCCACCTTAAAGGAACTCCTCCGGCAGGAACGGTGCGCCCTAGCCTTGGAGGTTTTCGCCGTAATCAAATCGGAGTACCGTGCCGAATTGGGACTGTACGCGGAGGTGGCAGCGGCGCTGTCGAGGAACGGAGCGGCAGAGGAAATCGACCGACTGGTTAGCGATTTAGACGGCGGAGATGGAGTGATTGAGTGGGGGGATGATGATAAGGGTTTGATTAAGTTGATTAAGGCGGTGATTAGTGGGAATAGAAGGGAATCGACGGTCAGGATTTATCGGATGATGAGGAGGAAGGGTTGGGGATCGATGATTAAAGCTGATGATTATATGATTAAGGTTTTAAGTAAGGGTTTAAGGAGGCTTGGGGAAATAGAGTTGGCTGATGAGATAAATAGGGAATTTGAAGACTTAGTGGGCAGTTTTTGA

Coding sequence (CDS)

ATGGCTTCTTCTCTTCACTCCACATTTCTCAAATCCCAAATCTCAATTCCGATCCCCGCCTCCACCGCTACATCCCCGGTCGCCGTTTCCTTTCGAGTACGGTGCGGCCCACGGGACAACCGAGGACCGCTAGTGAAAGGCAGAACCCTAAGCATCGAAGCAATCCAAGCAATTCAATCCCTAAAACGGGCCGAGAGATCCGACCCGACGAAGCTCCAACAAGTCCTCTCCACTACACTCTCCCGGCTGCTCAAAGCCGACCTTGTCGCCACCTTAAAGGAACTCCTCCGGCAGGAACGGTGCGCCCTAGCCTTGGAGGTTTTCGCCGTAATCAAATCGGAGTACCGTGCCGAATTGGGACTGTACGCGGAGGTGGCAGCGGCGCTGTCGAGGAACGGAGCGGCAGAGGAAATCGACCGACTGGTTAGCGATTTAGACGGCGGAGATGGAGTGATTGAGTGGGGGGATGATGATAAGGGTTTGATTAAGTTGATTAAGGCGGTGATTAGTGGGAATAGAAGGGAATCGACGGTCAGGATTTATCGGATGATGAGGAGGAAGGGTTGGGGATCGATGATTAAAGCTGATGATTATATGATTAAGGTTTTAAGTAAGGGTTTAAGGAGGCTTGGGGAAATAGAGTTGGCTGATGAGATAAATAGGGAATTTGAAGACTTAGTGGGCAGTTTTTGA

Protein sequence

MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSEYRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDLVGSF*
BLAST of Cucsa.359300 vs. Swiss-Prot
Match: PP266_ARATH (Pentatricopeptide repeat-containing protein At3g46870 OS=Arabidopsis thaliana GN=At3g46870 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.4e-09
Identity = 53/189 (28.04%), Postives = 98/189 (51.85%), Query Frame = 1

Query: 41  RGPLVKGRTL-SIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQE 100
           RGPL +G+ L   EA+  I  LKR +  D  KL + + T + RLLK D++A + EL RQE
Sbjct: 63  RGPLWRGKKLIGKEALFVILGLKRLKEDDE-KLDKFIKTHVFRLLKLDMLAVIGELERQE 122

Query: 101 RCALALEVFAVIKSE--YRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDD 160
             ALA+++F VI+ +  Y+ ++ +Y ++  +L+++   +E   L   +   +       D
Sbjct: 123 ETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKEN----LFPD 182

Query: 161 DKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELAD 220
            +   ++I+  +        + +Y  M +    S    ++   +VL KGL  L    L +
Sbjct: 183 SQTYTEVIRGFLRDGCPADAMNVYEDMLK----SPDPPEELPFRVLLKGL--LPHPLLRN 240

Query: 221 EINREFEDL 227
           ++ ++FE+L
Sbjct: 243 KVKKDFEEL 240

BLAST of Cucsa.359300 vs. Swiss-Prot
Match: PPR89_ARATH (Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana GN=At1g62350 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.1e-07
Identity = 46/179 (25.70%), Postives = 89/179 (49.72%), Query Frame = 1

Query: 50  LSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFA 109
           +S E + A + LKR + +   +L + + + +SRLLK+DLV+ L E  RQ +  L ++++ 
Sbjct: 1   MSKEGLIAAKELKRLQ-TQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYE 60

Query: 110 VIKSE--YRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKA 169
           V++ E  YR ++  Y ++   L+RN   +E  ++  DL   + +     D      L++ 
Sbjct: 61  VVRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLF----DQHTFGDLVRG 120

Query: 170 VISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDL 227
            +        +R+Y  MR     S  +      +V+ KGL  +   EL +++  +F +L
Sbjct: 121 FLDNELPLEAMRLYGEMRE----SPDRPLSLPFRVILKGL--VPYPELREKVKDDFLEL 168

BLAST of Cucsa.359300 vs. TrEMBL
Match: A0A0A0K6N6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447050 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 2.5e-120
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1

Query: 1   MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQS 60
           MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQS
Sbjct: 1   MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQS 60

Query: 61  LKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSEYRAELG 120
           LKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSEYRAELG
Sbjct: 61  LKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSEYRAELG 120

Query: 121 LYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRI 180
           LYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRI
Sbjct: 121 LYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRI 180

Query: 181 YRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDLVGSF 231
           YRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDLVGSF
Sbjct: 181 YRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDLVGSF 230

BLAST of Cucsa.359300 vs. TrEMBL
Match: M5WV79_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011224mg PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.8e-62
Identity = 135/222 (60.81%), Postives = 171/222 (77.03%), Query Frame = 1

Query: 1   MASSL---HSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQA 60
           MASSL    + FLK +     P +  T+       VRCGPRDNRGPLVKGR LSIEAIQA
Sbjct: 1   MASSLLPNPTHFLKLK-----PLTLTTNRTITHVSVRCGPRDNRGPLVKGRVLSIEAIQA 60

Query: 61  IQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSEYRA 120
           +Q+LKRA+RSDPT+L  + S TLSRL+KADLVA L+ELLRQE+C LAL+VF+  +SEY  
Sbjct: 61  VQALKRAQRSDPTELPTLASKTLSRLIKADLVAALRELLRQEQCHLALQVFSTFRSEYPP 120

Query: 121 ELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRREST 180
           +L +YAE+A AL+RNG AE++D L+  L+   GV +W D DKGLI+LI+AV++ +RREST
Sbjct: 121 DLSVYAEMALALARNGMAEDMDGLICVLEKESGV-QW-DSDKGLIRLIRAVVTADRREST 180

Query: 181 VRIYRMMRRKGWGSM-IKADDYMIKVLSKGLRRLGEIELADE 219
           V+IY M++R GWGS   KAD+YM++VLSKGLRRLGE+ LADE
Sbjct: 181 VKIYEMLKRNGWGSSDFKADEYMVRVLSKGLRRLGEVGLADE 215

BLAST of Cucsa.359300 vs. TrEMBL
Match: W9R688_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026238 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.5e-61
Identity = 131/217 (60.37%), Postives = 167/217 (76.96%), Query Frame = 1

Query: 9   FLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSD 68
           FLK+ + IP P +T T+  +    +RCGPRDNRGPLVKGR LSIEAIQA+Q+LKRA RSD
Sbjct: 12  FLKTPLPIPKP-NTTTAITSSYAPIRCGPRDNRGPLVKGRILSIEAIQAVQALKRAHRSD 71

Query: 69  PTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSEYRAELGLYAEVAAA 128
           P+ L  V S TLSRL+K+DL+A LKELLRQ+ CALAL VF+ ++SEYR +L LYA++  A
Sbjct: 72  PSTLPTVASKTLSRLIKSDLLAALKELLRQDHCALALHVFSAVRSEYRPDLSLYADMVIA 131

Query: 129 LSRNGAAEEIDRLVSDLD-GGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRK 188
           L +NG AE+IDRL+ DL+  G G +  GDD+KGLI+L++AVI+  RRESTVRIY M++  
Sbjct: 132 LEKNGMAEDIDRLIFDLEMEGCGAV--GDDNKGLIRLVRAVIAAERRESTVRIYGMLKMG 191

Query: 189 GWGSM-IKADDYMIKVLSKGLRRLGEIELADEINREF 224
             GS   +ADD+ +  LSKGLRRLGE  LADE++REF
Sbjct: 192 VLGSSGFEADDHTVGALSKGLRRLGEAALADEVDREF 225

BLAST of Cucsa.359300 vs. TrEMBL
Match: D7U0G1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g04100 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.5e-59
Identity = 131/225 (58.22%), Postives = 167/225 (74.22%), Query Frame = 1

Query: 2   ASSLHSTF-LKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQS 61
           +S+LHS F L S I  P+   T TS   +    RCGPRDNRGPL+KGR LSIEAIQAIQS
Sbjct: 3   SSALHSNFALFSPIKKPVQTITTTSYTPI----RCGPRDNRGPLMKGRVLSIEAIQAIQS 62

Query: 62  LKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSE--YRAE 121
           LKRA R DPTK+   LS TLSRL+KADL+ATL ELLRQ++C LAL VF+ ++SE  Y+ E
Sbjct: 63  LKRAHRGDPTKIDDFLSKTLSRLVKADLLATLNELLRQDQCDLALRVFSAVRSELWYKTE 122

Query: 122 LGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTV 181
           L LYA++ +AL+R G  EEIDRL+ DL+G   V     DDKG+++L+KAVI+  RR+STV
Sbjct: 123 LSLYADLVSALARKGMKEEIDRLICDLEGEGSV---RCDDKGIVRLVKAVIAAERRDSTV 182

Query: 182 RIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREF 224
           RIY +M+R G G     D+Y+ +VLS+GLRRLGE+ +ADE++ EF
Sbjct: 183 RIYGLMKRSGCGG---GDEYVGRVLSRGLRRLGELGVADEVDLEF 217

BLAST of Cucsa.359300 vs. TrEMBL
Match: A0A022QDW8_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a027140mg PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 6.3e-55
Identity = 126/226 (55.75%), Postives = 161/226 (71.24%), Query Frame = 1

Query: 1   MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQS 60
           MAS+ HS       S    A+   + +  +  +RCGPRDNRGPL+KGR LSIEAIQAIQS
Sbjct: 52  MASTAHSNLTLFSNSTTTTAAAPATNIRRTTTIRCGPRDNRGPLLKGRILSIEAIQAIQS 111

Query: 61  LKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSEYRAELG 120
           LKRA R+DP+ L   L    SRLLKADL A LKELLRQE+CALA  VF+VI+SEY A+L 
Sbjct: 112 LKRAHRTDPSNLPTHL---FSRLLKADLTAALKELLRQEQCALAARVFSVIRSEYGADLS 171

Query: 121 LYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRI 180
           +Y E+  AL+RNG  EEIDRLV++++  +G+I   D+ KGL++L+KA+I   R+ESTVRI
Sbjct: 172 MYGEMVVALARNGLTEEIDRLVNEME-TEGLIRC-DETKGLLRLVKALIFAERKESTVRI 231

Query: 181 YRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDL 227
           Y MM+  G+    + D+Y+ +VLSKGLRR GE ELADEI+ E   L
Sbjct: 232 YGMMKSSGY----EMDEYLGRVLSKGLRRFGEGELADEIDLELRRL 268

BLAST of Cucsa.359300 vs. TAIR10
Match: AT3G27750.1 (AT3G27750.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 186.4 bits (472), Expect = 2.0e-47
Identity = 106/212 (50.00%), Postives = 146/212 (68.87%), Query Frame = 1

Query: 14  ISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQ 73
           +S+ +P  T  S       +RCGPRDNRGPL+KGR LS EAIQ+IQSLKRA R+  +   
Sbjct: 19  LSVIVPKRTFVS-------IRCGPRDNRGPLLKGRILSTEAIQSIQSLKRAHRTGVS--- 78

Query: 74  QVLSTT---LSRLLKADLVATLKELLRQERCALALEVFAVIKSEY-RAELGLYAEVAAAL 133
             LS T   L RL+K+DL++ L+ELLRQ+ C LA+ V + +++EY   +L LYA++  AL
Sbjct: 79  --LSLTLRPLRRLIKSDLISVLRELLRQDYCTLAVHVLSTLRTEYPPLDLVLYADIVNAL 138

Query: 134 SRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGW 193
           +RN   +EIDRL+ ++DG    I+   DDK L KLI+AV+   RRES VR+Y +MR  GW
Sbjct: 139 TRNKEFDEIDRLIGEIDG----IDQRSDDKALAKLIRAVVGAERRESVVRVYTLMRESGW 198

Query: 194 GS-MIKADDYMIKVLSKGLRRLGEIELADEIN 221
           GS   +AD+Y+ +VLSKGL RLGE +LA +++
Sbjct: 199 GSESWEADEYVAEVLSKGLLRLGEPDLASQVS 214

BLAST of Cucsa.359300 vs. TAIR10
Match: AT5G09320.1 (AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain)

HSP 1 Score: 92.8 bits (229), Expect = 2.9e-19
Identity = 67/208 (32.21%), Postives = 107/208 (51.44%), Query Frame = 1

Query: 40  NRGPLVKGRTLSIEAIQAIQSLKRAE--------------RSDPTKLQQVLSTTLSRLLK 99
           NR PL +GR LSIEAIQA+Q+LKRA                S    L +V+ +   RLLK
Sbjct: 495 NRKPLQRGRMLSIEAIQAVQALKRANPLLPPPPVPSTSTTSSSSALLDRVIISKFRRLLK 554

Query: 100 ADLVATLKELLRQERCALALEVFAVIKSE--YRAELGLYAEVAAALSRNGAAEEIDRLVS 159
            D+VA L+ELLRQ  C+LAL+VF  I+ E  Y+ ++ +Y ++   ++ N   EE++ L S
Sbjct: 555 FDMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVMADNSLMEEVNYLYS 614

Query: 160 DLDGGDGV---IEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMI 219
            +    G+   IEW +       L+  +++    +  +  Y  M+  G+    + D    
Sbjct: 615 AMKSEKGLMAEIEWFN------TLLTILLNHKLFDLVMDCYAFMQSIGY----EPDRASF 674

Query: 220 KVLSKGLRRLGEIELADEINREFEDLVG 229
           +VL  GL   GE+ L+  + ++  +  G
Sbjct: 675 RVLVLGLESNGEMGLSAIVRQDAHEYYG 692

BLAST of Cucsa.359300 vs. TAIR10
Match: AT3G46870.1 (AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-10
Identity = 53/189 (28.04%), Postives = 98/189 (51.85%), Query Frame = 1

Query: 41  RGPLVKGRTL-SIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQE 100
           RGPL +G+ L   EA+  I  LKR +  D  KL + + T + RLLK D++A + EL RQE
Sbjct: 63  RGPLWRGKKLIGKEALFVILGLKRLKEDDE-KLDKFIKTHVFRLLKLDMLAVIGELERQE 122

Query: 101 RCALALEVFAVIKSE--YRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDD 160
             ALA+++F VI+ +  Y+ ++ +Y ++  +L+++   +E   L   +   +       D
Sbjct: 123 ETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKEN----LFPD 182

Query: 161 DKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELAD 220
            +   ++I+  +        + +Y  M +    S    ++   +VL KGL  L    L +
Sbjct: 183 SQTYTEVIRGFLRDGCPADAMNVYEDMLK----SPDPPEELPFRVLLKGL--LPHPLLRN 240

Query: 221 EINREFEDL 227
           ++ ++FE+L
Sbjct: 243 KVKKDFEEL 240

BLAST of Cucsa.359300 vs. TAIR10
Match: AT1G62350.1 (AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 2.3e-08
Identity = 46/179 (25.70%), Postives = 89/179 (49.72%), Query Frame = 1

Query: 50  LSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFA 109
           +S E + A + LKR + +   +L + + + +SRLLK+DLV+ L E  RQ +  L ++++ 
Sbjct: 1   MSKEGLIAAKELKRLQ-TQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYE 60

Query: 110 VIKSE--YRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKA 169
           V++ E  YR ++  Y ++   L+RN   +E  ++  DL   + +     D      L++ 
Sbjct: 61  VVRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLF----DQHTFGDLVRG 120

Query: 170 VISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDL 227
            +        +R+Y  MR     S  +      +V+ KGL  +   EL +++  +F +L
Sbjct: 121 FLDNELPLEAMRLYGEMRE----SPDRPLSLPFRVILKGL--VPYPELREKVKDDFLEL 168

BLAST of Cucsa.359300 vs. NCBI nr
Match: gi|449448168|ref|XP_004141838.1| (PREDICTED: uncharacterized protein LOC101217831 [Cucumis sativus])

HSP 1 Score: 439.5 bits (1129), Expect = 3.6e-120
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1

Query: 1   MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQS 60
           MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQS
Sbjct: 1   MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQS 60

Query: 61  LKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSEYRAELG 120
           LKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSEYRAELG
Sbjct: 61  LKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSEYRAELG 120

Query: 121 LYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRI 180
           LYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRI
Sbjct: 121 LYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRI 180

Query: 181 YRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDLVGSF 231
           YRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDLVGSF
Sbjct: 181 YRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDLVGSF 230

BLAST of Cucsa.359300 vs. NCBI nr
Match: gi|659124462|ref|XP_008462172.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g62350 [Cucumis melo])

HSP 1 Score: 418.7 bits (1075), Expect = 6.6e-114
Identity = 218/229 (95.20%), Postives = 223/229 (97.38%), Query Frame = 1

Query: 1   MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQS 60
           MASSLHSTFLKSQISIPIP STAT+ VAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQS
Sbjct: 28  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQS 87

Query: 61  LKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSEYRAELG 120
           LKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVI+SEYRAELG
Sbjct: 88  LKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIRSEYRAELG 147

Query: 121 LYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRI 180
           LYAEVAAALSRNGAAEEIDRLV DLDG DGVIEWGDDDKGLIKLIKAVISGNRRESTVRI
Sbjct: 148 LYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRI 207

Query: 181 YRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDLVGS 230
           YRMMRR GWGSMIK DDYMIKV+SKGLRR+GEIELADEINREF+DLVGS
Sbjct: 208 YRMMRRNGWGSMIKGDDYMIKVMSKGLRRVGEIELADEINREFQDLVGS 256

BLAST of Cucsa.359300 vs. NCBI nr
Match: gi|1009112149|ref|XP_015866768.1| (PREDICTED: uncharacterized protein LOC107404331 [Ziziphus jujuba])

HSP 1 Score: 265.4 bits (677), Expect = 9.4e-68
Identity = 141/227 (62.11%), Postives = 177/227 (77.97%), Query Frame = 1

Query: 1   MASSLH---STFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQA 60
           MA+SLH   +TFLK+ +    P S   +  A  F +RCGPRDNRGPLVKGR LSIEAIQA
Sbjct: 1   MATSLHPNPTTFLKTHL----PKSNLNNSTASRFLIRCGPRDNRGPLVKGRVLSIEAIQA 60

Query: 61  IQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSEYRA 120
           +QSLKRA+RSDPT +  ++S TLSRL+KADLVATLKELLRQ++CALAL VF+ ++SE+  
Sbjct: 61  VQSLKRAQRSDPTNISTLVSKTLSRLIKADLVATLKELLRQDQCALALHVFSNLRSEHEP 120

Query: 121 ELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRREST 180
            L LYA++  AL++NG AEEIDRL+ DL+   G I    DDKGLI+LI+AV+   RREST
Sbjct: 121 GLSLYADLVMALAKNGMAEEIDRLIFDLEKEGGGIPC--DDKGLIRLIRAVVGAERREST 180

Query: 181 VRIYRMMRRKGWGSM-IKADDYMIKVLSKGLRRLGEIELADEINREF 224
           VRIY MM+R GWGS   KAD+YM+K LS+GLRR+GE+ LADE+++EF
Sbjct: 181 VRIYGMMKRSGWGSSGFKADEYMVKALSRGLRRVGEVGLADEVDKEF 221

BLAST of Cucsa.359300 vs. NCBI nr
Match: gi|645244561|ref|XP_008228478.1| (PREDICTED: uncharacterized protein LOC103327886 [Prunus mume])

HSP 1 Score: 258.1 bits (658), Expect = 1.5e-65
Identity = 139/227 (61.23%), Postives = 175/227 (77.09%), Query Frame = 1

Query: 1   MASSLHST---FLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQA 60
           MASSLH     FLK +     P +  T+       VRCGPRDNRGPLVKGR LSIEAIQA
Sbjct: 1   MASSLHPNPTHFLKLK-----PLTLTTNRTVTHVSVRCGPRDNRGPLVKGRVLSIEAIQA 60

Query: 61  IQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSEYRA 120
           +Q+LKRA+RSDPT+L  + S TLSRL+KADLVA L+ELLRQE+C LAL+VF+  +SEY  
Sbjct: 61  VQALKRAQRSDPTQLPTLASKTLSRLIKADLVAALRELLRQEQCHLALQVFSTFRSEYPP 120

Query: 121 ELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRREST 180
           +L +YAE+A AL+RNG AE++DRL+  L+   GV  W D DKGLI+LI+AV+S +RREST
Sbjct: 121 DLSVYAEMALALARNGMAEDMDRLICVLEKESGV-PW-DSDKGLIRLIRAVVSADRREST 180

Query: 181 VRIYRMMRRKGWGSM-IKADDYMIKVLSKGLRRLGEIELADEINREF 224
           V+IY M++R GWGS   KAD+YM++VLSKGLRRLGE+ LADE++ +F
Sbjct: 181 VKIYEMLKRNGWGSSDFKADEYMVRVLSKGLRRLGEVGLADEVDMKF 220

BLAST of Cucsa.359300 vs. NCBI nr
Match: gi|658014676|ref|XP_008342662.1| (PREDICTED: uncharacterized protein LOC103405437 [Malus domestica])

HSP 1 Score: 255.4 bits (651), Expect = 9.7e-65
Identity = 134/228 (58.77%), Postives = 176/228 (77.19%), Query Frame = 1

Query: 1   MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQS 60
           MASSLH+         P+  +   S   VS  +RCGPRDNRGPLVKGR LSIEAIQA+Q+
Sbjct: 1   MASSLHTNATHFLSPKPVAQTPTRSTTRVS--IRCGPRDNRGPLVKGRVLSIEAIQAVQT 60

Query: 61  LKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSEYRAELG 120
           LKRA+RSDP +   ++S TLSRL+KADLVA L+ELLRQ++C LAL+VF+ ++SEY  +L 
Sbjct: 61  LKRAQRSDPAQFPALVSKTLSRLIKADLVAALRELLRQDQCHLALQVFSAVRSEYPPDLS 120

Query: 121 LYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRI 180
           +YAE+A AL+RN   E++DRL+ DL+   GV +WG  DKGLI+LI+AVI  +RRESTVRI
Sbjct: 121 VYAEMALALARNEMGEDMDRLICDLETESGV-QWG-SDKGLIRLIRAVIGADRRESTVRI 180

Query: 181 YRMMRRKGWGSM-IKADDYMIKVLSKGLRRLGEIELADEINREFEDLV 228
           Y+M++R GWGS   +AD+YM++VLSKGLRRLGE+ LADE++ +F  L+
Sbjct: 181 YKMLKRNGWGSTGFEADEYMVRVLSKGLRRLGEVGLADEVDLKFGSLL 224

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP266_ARATH4.4e-0928.04Pentatricopeptide repeat-containing protein At3g46870 OS=Arabidopsis thaliana GN... [more]
PPR89_ARATH4.1e-0725.70Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0K6N6_CUCSA2.5e-120100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447050 PE=4 SV=1[more]
M5WV79_PRUPE1.8e-6260.81Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011224mg PE=4 SV=1[more]
W9R688_9ROSA4.5e-6160.37Uncharacterized protein OS=Morus notabilis GN=L484_026238 PE=4 SV=1[more]
D7U0G1_VITVI1.5e-5958.22Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g04100 PE=4 SV=... [more]
A0A022QDW8_ERYGU6.3e-5555.75Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a027140mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G27750.12.0e-4750.00 FUNCTIONS IN: molecular_function unknown[more]
AT5G09320.12.9e-1932.21 Vacuolar sorting protein 9 (VPS9) domain[more]
AT3G46870.12.5e-1028.04 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G62350.12.3e-0825.70 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449448168|ref|XP_004141838.1|3.6e-120100.00PREDICTED: uncharacterized protein LOC101217831 [Cucumis sativus][more]
gi|659124462|ref|XP_008462172.1|6.6e-11495.20PREDICTED: pentatricopeptide repeat-containing protein At1g62350 [Cucumis melo][more]
gi|1009112149|ref|XP_015866768.1|9.4e-6862.11PREDICTED: uncharacterized protein LOC107404331 [Ziziphus jujuba][more]
gi|645244561|ref|XP_008228478.1|1.5e-6561.23PREDICTED: uncharacterized protein LOC103327886 [Prunus mume][more]
gi|658014676|ref|XP_008342662.1|9.7e-6558.77PREDICTED: uncharacterized protein LOC103405437 [Malus domestica][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.359300.1Cucsa.359300.1mRNA


The following gene(s) are paralogous to this gene:

None