Cucsa.352310 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.352310
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionWD repeat-containing 18
Locationscaffold03533 : 183225 .. 186856 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGGTTCGTTCGGCAATTCCCCTCACCCTATTCAACTCCTTCCCGCCGCCGTCTCCTTCGGGGCTAAATTTCGTTGTGGTTGCCGCGCTGTTTTTCATCCATCGCACCGCCATAAAAATATTCAAACCAAATTGAAAACTGAAACCCTCCTCTCAAGCTCTCAACTCACAATGGTGCTACTCGTTGCTTCCTCGTCTATTGATTCAGGGATTGGTTGCTGGGACCTCCATACCGGCTCAGAACAACTGCGTTACAAGTCTTGTGCTTCTCCACCACATGGTCTTGTTTGTGTAGGTGGAAAGTTTCTCGCATGCTCTCAGCTTCGCGATCCTGCAGCCACTGCTGGCTCCGTTCTCTACTGGTCTTGGTCTAAGGTACTCGTTATTGTAACGAATTTCAGCCCTCTGTTCCTCAATACCCTGCTTGATTAATTTTTCTTTCTACAGCCTCAAGTTGAAGTTAAGAGTTTTCCGGCTGAACCAATAATGGCCTTGGCTTCCAACCATGAGGGTACTTATATTGTTGGTGGTGGTTTCTCTGGAGATATATACTTATGGGAGGTAAATTTTGATTTTATAATTTATGCTCTGCCATTGAACTCTAAAATTGTCGTCTTCTTGTTCTATTAATTGACACATATTCTTGGCTGTAGTATAAGATGAATTGCTCGTTGTTGTAGGTTTTGAGTGGTAGACTGCTTAAAAAATGGCATGCTCATTATAGAGCAGTTACTTGCCTTGTATTCTCTGAAGATGACTCCCTGTTAGTTTCTGGTTCTGAAGATGGCTGCATTAGAGTTTGGTCTCTTATAACGTATAAATTTCATCATTTGGCATTATGTTTGTGTGTGTAGGTTTTTATATGAATTGTAAAAATTCTTATTACAAACACGTTGATTCCAGGGTTTTTGATGATGGTTGGCAAAGGGAAGCAAAACATTTGTATGAGCATAGTTTCACTGGGCATAATCTGCCTGTTACTGACATTGTCGTTGGCTATGGAGGATTCAATGCTATTATAATCTCTTCCTCTGTGGATCGTACTTGTAAGGTTTGGCACTCTATTGAATTTAACACTTCTATGTTGATAATGTAATTTTGTGATGATGTGGCCATGTAGTTTGGTTAGTTAATTAGTTTTACAACCACTTTGGAAGTCCAATTGCATTGACTTGGTAAATCGCCCTTTTTTGCAATTACAACAGCTTGACGTTTAAGGTTTGCTTACATCCTCTTCTAGGATTTTAGAAACATGTGAAAACATATTATCTAGACTAAGTTTGGGCTGTAACCAAAAATGACAATGTATGGAATGGGAGGATAGAGTGCACAGAGGTGGATATAATTATCCAACTACGATTTATATCAATATGCATTCTGGTCTAGGATTTTCACATTTTTAATAGTGATGTGGGTATACTGTATATGAACATGTTCGTTTATGATTTATCAACAATGAGTAATGACTAATTTCCTATCCTAACTTCACTCGTATCGAATTTTCTTTGGTGAGTCATATGTTGTATGCTAACTTGACTTTTGTAGGTGTGGAGCTTATCGAAGGGGAAGTTGTTAAGAAATATCATATTTCCTTCAATCATTGATGCCATTGCTTTGGATCCTGGTGAACATGTCTTTTATGGTGGTGGTAGAGATGGGAAGATCTACACTGCTGCGCTTAATGCTAAATCCCCATCCAGCAGTGACTACGGATTGCATATACTCGGGTCAATATCAAATCAAAGGTCTGTATTTATCTCTTTGATTTTCTTTCATCGTGGACCCATTCTTCTTTCAACTTTCATTAATATATCATCAGTTAAACATCAGAGATTAAGTTTTCAATTTCCTCTAATTTTGTTTCTCCTTTCCGGTTTCAAGAATCATCTTTTCTTTGTTTCATGCAATATATATTAGATTGTCTAATGATATAATTATGCAATGAAATGTTGAGGAATTTCTAGTTGCTATTAGTTTGGTGCACATGCACTAGGATTATTTGTAATGGTGTCTTGATTTCTTAAAAACTAGGAATTAGTATTCTACTTCCAAGTCAATCGTTGTTGTGTCTCGGTTGCTAAACAGCTACTCTCTTTATGGTTTCTTTAAAGAAACTGGATGTGTTTTTTTATATGTAATATAGGTTTTTAATGCAAGATATATTATCTTCTTGGATTTGCTATATTGTCCAACTTAATGTCCTTTTGGATTCTTACTAGCAAGTCAGTTACTTCCTTGGCATACTGCTCAAGTGGTAATTTGTTGATCTCTGGATCTGAGGATGGAGCAATACGAGTTTGGGATACAAGAACCAATAACGTTATTCGTGTTTTCAGACATTCCAAAGGTAATAAGCCATTTAAATATTATTACTTTAATAAGTTTAGTTTCTGTGAAATTGTATTTTGTTTTCATTTACGGACCGTGTGACATTGTAAATAAATATTATTTTTTGCATAAATACCTATACCAAGTTGTTTTTCATTTTCAAATTTAATCTTAGCTGAGGCTTAAGGTACTTCTTTCAATATTTTGTTTCCTCTGCTTTATAATTCTAATTGTTAGAGATTGGAGGATGTTATATTCAAATTTTTTAAAAATTATGTTTTGAAGCTTTATACTCTTTTTTATCTCTTTCTTAAGAACTTTATTTGAGCATTTTAAGTGAAATCATTTATATATAATTTTTTTAGATGTACATTCATTTATTTAATTTTCTGCATATAAGTTAACCTAGCAAGTGCAATTTATCATTTGCTTAATTCATGACCAGCATTTTTATTATATGATATTAATGAAAATACATAATGCTCCGTACGCAGGTCCTGTAAATAATATACTTCTTGTTCAACAACAGCCCCTCCCTAAATCACAGTCAACTTCCCAAGGTTCTTTGAGAAAGCACCGACCACTCTTACCTCCTGCCCTTGCGAAATTTGAAAACTCTAAGGACGAGGATGAATACACTGGTGTTATCATTGATCCATCAGGTCCTCCCAAGGAATCTACGGGGTTTTCTTTCCTTAGTTCTCACGTTATGGATGATCAAATCACAGAACTTCAGGTGCTTTCTTTTTTTTCTATCCCCCTTCCCTGTGGTCCTAAAATTCCTTTCTTTTTTTCCTGGCTTAATTAGTTTGTATCTTATGCTGTTCTGGGATAGACACAATATTTTGATATCCCATAATCCTCTATACAATTAAAACATGTTCTAACATGCGGTTTTCTGTATTTCAGCAACAGGGTTCTGCTGCCACCGGAATGGAGTTGGAAAGACTTAAGCATGATTATGGAAAATCCAAGCAAATGTTACAACACTGGAGAAAAATGTACGACAATTTACATCAATTTTGTGTTAATGAGCTTCTGGATGGCAATCAAACTAAAAATATAGAAGGCAATTCCACTTGAGCGTCGCTTTCACTTCTCTTATGTGTTCTATTTGTTTTATCTATCTCCAGTCCTAGAAATTGTATAATCGTGTCGAAACAAATTCGATGGAATTGTTAGGAAGTATAAGTCATCGTTGATTAATTTAAATTCCAAAATCCCATTTTTGGGATAAGAGATCTGTACATGGTGAATACAATTCCTTGATTTATAAGATTATTTTCGTTATGGGGGAATTCCTT

mRNA sequence

GTTGGTTCGTTCGGCAATTCCCCTCACCCTATTCAACTCCTTCCCGCCGCCGTCTCCTTCGGGGCTAAATTTCGTTGTGGTTGCCGCGCTGTTTTTCATCCATCGCACCGCCATAAAAATATTCAAACCAAATTGAAAACTGAAACCCTCCTCTCAAGCTCTCAACTCACAATGGTGCTACTCGTTGCTTCCTCGTCTATTGATTCAGGGATTGGTTGCTGGGACCTCCATACCGGCTCAGAACAACTGCGTTACAAGTCTTGTGCTTCTCCACCACATGGTCTTGTTTGTGTAGGTGGAAAGTTTCTCGCATGCTCTCAGCTTCGCGATCCTGCAGCCACTGCTGGCTCCGTTCTCTACTGGTCTTGGTCTAAGCCTCAAGTTGAAGTTAAGAGTTTTCCGGCTGAACCAATAATGGCCTTGGCTTCCAACCATGAGGGTACTTATATTGTTGGTGGTGGTTTCTCTGGAGATATATACTTATGGGAGGTTTTGAGTGGTAGACTGCTTAAAAAATGGCATGCTCATTATAGAGCAGTTACTTGCCTTGTATTCTCTGAAGATGACTCCCTGTTAGTTTCTGGTTCTGAAGATGGCTGCATTAGAGTTTGGTCTCTTATAACGGTTTTTGATGATGGTTGGCAAAGGGAAGCAAAACATTTGTATGAGCATAGTTTCACTGGGCATAATCTGCCTGTTACTGACATTGTCGTTGGCTATGGAGGATTCAATGCTATTATAATCTCTTCCTCTGTGGATCGTACTTGTAAGGTGTGGAGCTTATCGAAGGGGAAGTTGTTAAGAAATATCATATTTCCTTCAATCATTGATGCCATTGCTTTGGATCCTGGTGAACATGTCTTTTATGGTGGTGGTAGAGATGGGAAGATCTACACTGCTGCGCTTAATGCTAAATCCCCATCCAGCAGTGACTACGGATTGCATATACTCGGGTCAATATCAAATCAAAGCAAGTCAGTTACTTCCTTGGCATACTGCTCAAGTGGTAATTTGTTGATCTCTGGATCTGAGGATGGAGCAATACGAGTTTGGGATACAAGAACCAATAACGTTATTCGTGTTTTCAGACATTCCAAAGGTCCTGTAAATAATATACTTCTTGTTCAACAACAGCCCCTCCCTAAATCACAGTCAACTTCCCAAGGTTCTTTGAGAAAGCACCGACCACTCTTACCTCCTGCCCTTGCGAAATTTGAAAACTCTAAGGACGAGGATGAATACACTGGTGTTATCATTGATCCATCAGGTCCTCCCAAGGAATCTACGGGGTTTTCTTTCCTTAGTTCTCACGTTATGGATGATCAAATCACAGAACTTCAGCAACAGGGTTCTGCTGCCACCGGAATGGAGTTGGAAAGACTTAAGCATGATTATGGAAAATCCAAGCAAATGTTACAACACTGGAGAAAAATGTACGACAATTTACATCAATTTTGTGTTAATGAGCTTCTGGATGGCAATCAAACTAAAAATATAGAAGGCAATTCCACTTGAGCGTCGCTTTCACTTCTCTTATGTGTTCTATTTGTTTTATCTATCTCCAGTCCTAGAAATTGTATAATCGTGTCGAAACAAATTCGATGGAATTGTTAGGAAGTATAAGTCATCGTTGATTAATTTAAATTCCAAAATCCCATTTTTGGGATAAGAGATCTGTACATGGTGAATACAATTCCTTGATTTATAAGATTATTTTCGTTATGGGGGAATTCCTT

Coding sequence (CDS)

ATGGTGCTACTCGTTGCTTCCTCGTCTATTGATTCAGGGATTGGTTGCTGGGACCTCCATACCGGCTCAGAACAACTGCGTTACAAGTCTTGTGCTTCTCCACCACATGGTCTTGTTTGTGTAGGTGGAAAGTTTCTCGCATGCTCTCAGCTTCGCGATCCTGCAGCCACTGCTGGCTCCGTTCTCTACTGGTCTTGGTCTAAGCCTCAAGTTGAAGTTAAGAGTTTTCCGGCTGAACCAATAATGGCCTTGGCTTCCAACCATGAGGGTACTTATATTGTTGGTGGTGGTTTCTCTGGAGATATATACTTATGGGAGGTTTTGAGTGGTAGACTGCTTAAAAAATGGCATGCTCATTATAGAGCAGTTACTTGCCTTGTATTCTCTGAAGATGACTCCCTGTTAGTTTCTGGTTCTGAAGATGGCTGCATTAGAGTTTGGTCTCTTATAACGGTTTTTGATGATGGTTGGCAAAGGGAAGCAAAACATTTGTATGAGCATAGTTTCACTGGGCATAATCTGCCTGTTACTGACATTGTCGTTGGCTATGGAGGATTCAATGCTATTATAATCTCTTCCTCTGTGGATCGTACTTGTAAGGTGTGGAGCTTATCGAAGGGGAAGTTGTTAAGAAATATCATATTTCCTTCAATCATTGATGCCATTGCTTTGGATCCTGGTGAACATGTCTTTTATGGTGGTGGTAGAGATGGGAAGATCTACACTGCTGCGCTTAATGCTAAATCCCCATCCAGCAGTGACTACGGATTGCATATACTCGGGTCAATATCAAATCAAAGCAAGTCAGTTACTTCCTTGGCATACTGCTCAAGTGGTAATTTGTTGATCTCTGGATCTGAGGATGGAGCAATACGAGTTTGGGATACAAGAACCAATAACGTTATTCGTGTTTTCAGACATTCCAAAGGTCCTGTAAATAATATACTTCTTGTTCAACAACAGCCCCTCCCTAAATCACAGTCAACTTCCCAAGGTTCTTTGAGAAAGCACCGACCACTCTTACCTCCTGCCCTTGCGAAATTTGAAAACTCTAAGGACGAGGATGAATACACTGGTGTTATCATTGATCCATCAGGTCCTCCCAAGGAATCTACGGGGTTTTCTTTCCTTAGTTCTCACGTTATGGATGATCAAATCACAGAACTTCAGCAACAGGGTTCTGCTGCCACCGGAATGGAGTTGGAAAGACTTAAGCATGATTATGGAAAATCCAAGCAAATGTTACAACACTGGAGAAAAATGTACGACAATTTACATCAATTTTGTGTTAATGAGCTTCTGGATGGCAATCAAACTAAAAATATAGAAGGCAATTCCACTTGA

Protein sequence

MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGSVLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNVIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGVIIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRKMYDNLHQFCVNELLDGNQTKNIEGNST*
Homology
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BLAST of Cucsa.352310 vs. Swiss-Prot
Match: RID3_ARATH (Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana GN=RID3 PE=1 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 1.1e-141
Identity = 256/436 (58.72%), Postives = 322/436 (73.85%), Query Frame = 1 

Query: 2   VLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGSV 61
           + ++ASSSID GIG WDL TG+EQL++K CASP HGL  VG KFLA SQL     T+GS+
Sbjct: 3   ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQL-SARNTSGSI 62

Query: 62  LYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYR 121
            YWSW+KPQ EVKS+P EPI ALA+N+EGTY+VGGG SGDIYLWEV +G+LLKKWH HYR
Sbjct: 63  FYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYR 122

Query: 122 AVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVV 181
           +VTCLVFS DDSLLVSGS+DG IRVWSLI +FDD  +++   LYEH+F  H + VTDIV+
Sbjct: 123 SVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVI 182

Query: 182 GYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIY 241
            YGG NA+IISSS DRTCKVWSLS+GKLL+NIIFPS+I+A+ALDPG  VFY G RD KIY
Sbjct: 183 DYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIY 242

Query: 242 TAALNAKSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNV 301
             A+NA    +S+YG  +LGS+S + K++T LAYC+ GNLLISGSEDG + VWD ++   
Sbjct: 243 IGAINA----TSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRH 302

Query: 302 IRVFRHS----KGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEY 361
           +R   H+    KGPVNNI +V++  +  S  T Q S +    L+PP L K+E    ED  
Sbjct: 303 VRTLIHAKGSRKGPVNNIQIVRKTIVANSNKT-QVSWKSRGALIPPPLEKYERPV-EDTM 362

Query: 362 TGVI-IDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQ 421
            G++ +DP          SFLS+ ++D+Q+ ELQQQGSAAT ME+ERLK +Y +S QM +
Sbjct: 363 DGIVTVDPPPFSDVPVYSSFLSADLIDEQVKELQQQGSAATEMEMERLKLEYKRSLQMNE 422

Query: 422 HWRKMYDNLHQFCVNE 433
            W+K Y+NL Q  + E
Sbjct: 423 QWQKNYENLLQVVMEE 431

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BLAST of Cucsa.352310 vs. Swiss-Prot
Match: WDR18_BOVIN (WD repeat-containing protein 18 OS=Bos taurus GN=WDR18 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 7.2e-40
Identity = 102/311 (32.80%), Postives = 161/311 (51.77%), Query Frame = 1 

Query: 17  WDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGSVLYWSWS---KPQVEV 76
           W+LH+G+  L Y+   + P GL  + G++L  +QL       G     +W    K Q++ 
Sbjct: 23  WELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQL-------GKNYICAWELQRKDQLQQ 82

Query: 77  KSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDS 136
           K     P+  L ++  G Y++ G  S +IYLWEV +G LL     HY+ V+CL F+ D S
Sbjct: 83  KIMCPGPVTCLTTSPNGLYVLAG-ISENIYLWEVSTGNLLVILSRHYQDVSCLQFTGDSS 142

Query: 137 LLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISS 196
             +SG +D  +  WSL +V      R       H ++ H LP+TD+  G+GG  A + ++
Sbjct: 143 HFISGGKDCLVLAWSLCSVLQADPSRTPAP--RHVWSRHTLPITDLHCGFGGPLARVATA 202

Query: 197 SVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAAL------NA 256
           S+D+T K+W +S G+LL +++F   I A+ +D  EH  + GG DG I+   L        
Sbjct: 203 SLDQTVKLWEVSSGELLLSVLFDVGILAVTMDLAEHYMFCGGSDGSIFQVDLCTWPGQRE 262

Query: 257 KSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNVIRVFRH 316
           KS         +     NQ   VT L+  + G++L+SGS D  +R+WD ++   +R    
Sbjct: 263 KSFQPEQEHGKVFRGHRNQ---VTCLSVSTDGSVLLSGSHDETVRLWDVQSQQCLRTVT- 319

Query: 317 SKGPVNNILLV 319
            KGPV N  ++
Sbjct: 323 LKGPVTNACIM 319

[Close]
BLAST of Cucsa.352310 vs. Swiss-Prot
Match: WDR18_HUMAN (WD repeat-containing protein 18 OS=Homo sapiens GN=WDR18 PE=1 SV=2)

HSP 1 Score: 166.0 bits (419), Expect = 9.4e-40
Identity = 101/308 (32.79%), Postives = 163/308 (52.92%), Query Frame = 1 

Query: 17  WDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGSVLYWSWSKPQVEVKSF 76
           W+LH+G+  L Y+   + P GL  + G++L  +QL     +A  +      K Q++ K  
Sbjct: 23  WELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQLGKNYISAWELQ----RKDQLQQKIM 82

Query: 77  PAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLV 136
              P+  L ++  G Y++ G  +  I+LWEV +G LL     HY+ V+CL F+ D S  +
Sbjct: 83  CPGPVTCLTASPNGLYVLAG-VAESIHLWEVSTGNLLVILSRHYQDVSCLQFTGDSSHFI 142

Query: 137 SGSEDGCIRVWSLITVFDDGWQR--EAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISSS 196
           SG +D  + VWSL +V      R    +H++ H    H LP+TD+  G+GG  A + +SS
Sbjct: 143 SGGKDCLVLVWSLCSVLQADPSRIPAPRHVWSH----HALPITDLHCGFGGPLARVATSS 202

Query: 197 VDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSPSSSD 256
           +D+T K+W +S G+LL +++F   I A+ +D  EH  + GG +G I+   L    P   +
Sbjct: 203 LDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMFCGGSEGSIFQVDL-FTWPGQRE 262

Query: 257 YGLH---ILGSI-SNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNVIRVFRHSKG 316
              H     G +       VT L+  + G++L+SGS D  +R+WD ++   IR     KG
Sbjct: 263 RSFHPEQDAGKVFKGHRNQVTCLSVSTDGSVLLSGSHDETVRLWDVQSKQCIRTVA-LKG 319

Query: 317 PVNNILLV 319
           PV N  ++
Sbjct: 323 PVTNAAIL 319

[Close]
BLAST of Cucsa.352310 vs. Swiss-Prot
Match: WDR18_RAT (WD repeat-containing protein 18 OS=Rattus norvegicus GN=Wdr18 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.4e-38
Identity = 99/312 (31.73%), Postives = 159/312 (50.96%), Query Frame = 1 

Query: 17  WDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGSVLYWSWS---KPQVEV 76
           W+LH+G+  L Y+   + P GL  + G++L        AA  G     +W    K Q++ 
Sbjct: 23  WELHSGANLLTYRGGQAGPRGLALLNGEYLL-------AAQQGKNYICAWELQRKDQLQQ 82

Query: 77  KSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDS 136
           K     P+  L +   G Y++ G  +  IYLWEV +G LL     HY+ V+CL F+ D S
Sbjct: 83  KIMCPGPVTCLTTAPNGLYVLAG-IAESIYLWEVSTGNLLVILSRHYQDVSCLKFTGDGS 142

Query: 137 LLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISS 196
             VS  +D  +  WSL +V      R       H ++ H LP+TD+  G+GG  A + ++
Sbjct: 143 HFVSAGKDCLVLAWSLCSVLQADPSRILAP--RHVWSQHTLPITDLHCGFGGPMARVATA 202

Query: 197 SVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAK-SPSS 256
           S+D+T K+W++S G LL +++F   I ++ +D  EH  + GG DG I+   L ++  P  
Sbjct: 203 SLDQTMKLWAISSGDLLLSVLFDMGITSVTMDLAEHYIFCGGSDGSIFQVDLCSRPGPRE 262

Query: 257 SDY-GLHILGSI-SNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNVIRVFRHSKG 316
             +      G +       VT L+  + G++L+SGS D ++R+WD ++   +R     KG
Sbjct: 263 QSFQPEQNTGKVFKGHRNQVTCLSVSTDGSILLSGSHDESVRLWDVKSKQCVRTV-PLKG 322

Query: 317 PVNNILLVQQQP 323
           PV N  +    P
Sbjct: 323 PVTNAAITLAPP 323

[Close]
BLAST of Cucsa.352310 vs. Swiss-Prot
Match: WDR18_MOUSE (WD repeat-containing protein 18 OS=Mus musculus GN=Wdr18 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.9e-38
Identity = 99/313 (31.63%), Postives = 158/313 (50.48%), Query Frame = 1 

Query: 17  WDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGSVLYWSWS---KPQVEV 76
           W+LH+G+  L Y+   + P GL  + G++L        AA  G     +W    K Q++ 
Sbjct: 23  WELHSGANLLTYRGGQAGPRGLALLNGEYLL-------AAQQGKNYICAWELQRKDQLQQ 82

Query: 77  KSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDS 136
           K     P+  L +   G Y++ G  +  IYLWEV +G LL     HY+ V+CL F+ D S
Sbjct: 83  KIMCPGPVTCLTTAPNGLYVLAG-IAESIYLWEVCTGNLLVILSRHYQDVSCLKFTGDGS 142

Query: 137 LLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISS 196
             VS  +D     WSL +V      R       H ++ H LP+TD+  G+GG  A + ++
Sbjct: 143 HFVSAGKDCLALAWSLCSVLQADPSRILAP--RHVWSQHTLPITDLHCGFGGPMARVATA 202

Query: 197 SVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSPSSS 256
           S+D+T K+W++S G LL +++F   I ++ +D  EH  + GG DG I+   L    P   
Sbjct: 203 SLDQTVKLWAISSGDLLLSVLFDMGITSVTMDLAEHHIFCGGSDGSIFQVDL-CSWPGLR 262

Query: 257 DYGL---HILGSI-SNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNVIRVFRHSK 316
           ++        G +       VT L+  + G++L+SGS D ++R+WD ++   +R     K
Sbjct: 263 EHSFQPEQNTGKVFKGHRNQVTCLSVSTDGSVLLSGSHDESVRLWDVKSKQCLRTVT-LK 322

Query: 317 GPVNNILLVQQQP 323
           GPV N  ++   P
Sbjct: 323 GPVTNAAIILAPP 323

[Close]
BLAST of Cucsa.352310 vs. TrEMBL
Match: A0A0A0KZT0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G639920 PE=4 SV=1)

HSP 1 Score: 910.2 bits (2351), Expect = 9.8e-262
Identity = 445/447 (99.55%), Postives = 445/447 (99.55%), Query Frame = 1 

Query: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 60
           MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVG KFLACSQLRDPAATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGRKFLACSQLRDPAATAGS 60

Query: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120
           VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180
           RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
           VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300
           YTAALNAK PSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300

Query: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 360
           VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 360

Query: 361 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 420
           IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK
Sbjct: 361 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 420

Query: 421 MYDNLHQFCVNELLDGNQTKNIEGNST 448
           MYDNLHQFCVNELLDGNQTKNIEGNST
Sbjct: 421 MYDNLHQFCVNELLDGNQTKNIEGNST 447

[Close]
BLAST of Cucsa.352310 vs. TrEMBL
Match: A0A061FBK5_THECC (WD-repeat protein, putative isoform 1 OS=Theobroma cacao GN=TCM_033817 PE=4 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 8.0e-171
Identity = 299/448 (66.74%), Postives = 360/448 (80.36%), Query Frame = 1 

Query: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 60
           M +++ASSSID GIGCWDL TG+EQLRYK+CASPPHGLV VG +FLA SQLRDP+AT+G 
Sbjct: 1   MDVVIASSSIDGGIGCWDLQTGAEQLRYKTCASPPHGLVSVGRRFLASSQLRDPSATSGH 60

Query: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120
           VLYWSWSKPQ EVKSFPAEPI  LA++ EG+YIVGGG SGDIYLWEV +GRLLKKWHAHY
Sbjct: 61  VLYWSWSKPQAEVKSFPAEPIKPLAADSEGSYIVGGGSSGDIYLWEVATGRLLKKWHAHY 120

Query: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180
           RAVTCLVFSED+SL++SGS+DGC+RVWSL  +FDD  +++A HLYE+SFT H L VTDI+
Sbjct: 121 RAVTCLVFSEDNSLVISGSDDGCVRVWSLFLIFDDVRRQQASHLYEYSFTEHTLCVTDII 180

Query: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
           +GYGG +AII+S+S DRTCKVWSLS+G+LLRNI+FPSIIDAIALDPGEHVFY G RDGKI
Sbjct: 181 MGYGGGSAIIVSASEDRTCKVWSLSRGRLLRNIVFPSIIDAIALDPGEHVFYAGSRDGKI 240

Query: 241 YTAALNAKSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300
           Y AALNA+S  S+ YGLHI+GS+S+ SK+VT LAY +  NLL+SGSEDG +RVWD +T N
Sbjct: 241 YIAALNAESSPSNSYGLHIIGSLSDHSKAVTCLAYSTERNLLLSGSEDGMVRVWDVKTQN 300

Query: 301 VIRVFRHSKGPVNNILLVQQQ-PLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTG 360
           +IR+FRH+KGPVNNIL+V +   L +++S +QG  R+H   LPP L K+ NS DED    
Sbjct: 301 IIRMFRHAKGPVNNILIVSRPLSLGRAESNAQGFSRRHGSSLPPPLEKYANSTDEDMDNK 360

Query: 361 VIIDPSGPPKESTGFSFLSSHVMDDQITELQQQG-SAATGMELERLKHDYGKSKQMLQHW 420
            II+        T  S+LSS +++D I ELQQQG SAA  ME+E LK D  +S  M+Q W
Sbjct: 361 AIINLPATSNLPTDASYLSSQLINDHIKELQQQGSSAAVEMEVEILKLDCKRSMPMVQQW 420

Query: 421 RKMYDNLHQFCVNELLDGNQTKNIEGNS 447
           +K Y NL +FCVNELLDG Q    EGNS
Sbjct: 421 KKNYYNLQEFCVNELLDGEQMGGSEGNS 448

[Close]
BLAST of Cucsa.352310 vs. TrEMBL
Match: M5XB85_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005814mg PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 4.0e-170
Identity = 299/446 (67.04%), Postives = 356/446 (79.82%), Query Frame = 1 

Query: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 60
           M ++VASSSI++GIGCWDLHTG+EQLRYK CASPPHGLVCVG +FLA SQLR+P+A +GS
Sbjct: 1   MDVVVASSSIEAGIGCWDLHTGAEQLRYKLCASPPHGLVCVGQRFLASSQLREPSA-SGS 60

Query: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120
           V YWSWSKPQV+VKSFPAE I  LA+N EGTYIVGGG SG+IYLWEV SGRLLKKWHAHY
Sbjct: 61  VQYWSWSKPQVDVKSFPAEQIKPLAANSEGTYIVGGGLSGNIYLWEVASGRLLKKWHAHY 120

Query: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180
           RAV+CLVFS+DDSLL+SGSEDG IRVWSL+ +FDD  +++   LYEH FTGH L VTD+V
Sbjct: 121 RAVSCLVFSDDDSLLISGSEDGGIRVWSLLLIFDDFRRQQRSQLYEHDFTGHALCVTDVV 180

Query: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
            GYGG NAII+S+S+DR CKVWS+SKGKLLRNI+FP+I+DAIALDPGEHVF+ GGRDGKI
Sbjct: 181 TGYGGGNAIIVSASLDRRCKVWSISKGKLLRNIVFPTIVDAIALDPGEHVFFAGGRDGKI 240

Query: 241 YTAALNAKSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300
           Y AALNA+S S S YGLHI+   SN S +VT L Y  SGN LISGSEDG +RVWD +++N
Sbjct: 241 YVAALNAESTSDSKYGLHIINCFSNHSNTVTCLVYSISGNCLISGSEDGVVRVWDAKSHN 300

Query: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 360
           +IRVF+H+KGPVNNIL+++QQ    SQ  SQ S R+H   LPP L K+  ++D  +   V
Sbjct: 301 IIRVFKHAKGPVNNILVIRQQ---LSQMNSQSSSRRHGSSLPPPLEKYPIAEDPTDLKAV 360

Query: 361 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 420
            I        ST   +  S  ++ QI ELQQQGSA+  ME+ERLKHDY +S QM+Q W+K
Sbjct: 361 -IGRQATCSNSTEALYPRSDGINGQIKELQQQGSASAEMEIERLKHDYERSIQMVQQWKK 420

Query: 421 MYDNLHQFCVNELLDGNQTKNIEGNS 447
           MYDNLHQFCVNELLDG+Q     GN+
Sbjct: 421 MYDNLHQFCVNELLDGDQVGIPNGNA 441

[Close]
BLAST of Cucsa.352310 vs. TrEMBL
Match: A0A0D2U4L3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G020600 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 6.7e-170
Identity = 296/450 (65.78%), Postives = 357/450 (79.33%), Query Frame = 1 

Query: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 60
           M +++ASSSID GIGCWDL TG+EQLRYK+CASPPHGL  VG +FLACSQLRDP+AT+G 
Sbjct: 1   MSVVIASSSIDGGIGCWDLQTGAEQLRYKTCASPPHGLTTVGCRFLACSQLRDPSATSGH 60

Query: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120
           +LYWSWSKPQ +VKSFP EPI  L +N +GTYIVGGG SGDIY+WEV +GRLLKKWHAHY
Sbjct: 61  LLYWSWSKPQAQVKSFPVEPIKPLIANSDGTYIVGGGSSGDIYIWEVATGRLLKKWHAHY 120

Query: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180
           RA+TCLVFSEDDSLL+SGSEDGC+RVWSL  +FDD  +++  HLYE+SFT H L VTDIV
Sbjct: 121 RAITCLVFSEDDSLLISGSEDGCVRVWSLFMIFDDVRRQQVSHLYEYSFTEHTLRVTDIV 180

Query: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
           +GYGG NAII+S+S DRTCKVWSLSKG+LLRN++FPSIIDAIA+DPGEHVFY G RDGKI
Sbjct: 181 IGYGGGNAIIVSASEDRTCKVWSLSKGRLLRNVVFPSIIDAIAIDPGEHVFYAGSRDGKI 240

Query: 241 YTAALNAKSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300
           Y  ALNA+S  S +YGLHI+GS+++QSK VT LAY + GNLL+SGSEDG IRVWD +T N
Sbjct: 241 YITALNAESSPSDNYGLHIIGSLTDQSKPVTCLAYSAEGNLLLSGSEDGMIRVWDVKTQN 300

Query: 301 VIRVFRHSKGPVNNILLVQ-QQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTG 360
           + R+FRHSKGPVNNI++V+   PL +++S SQ S RKH   LPP L K+ NS DED    
Sbjct: 301 ITRMFRHSKGPVNNIVIVRLPYPLGRAESKSQPSSRKHELSLPPPLEKYANSSDEDMDNK 360

Query: 361 VII---DPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATG-MELERLKHDYGKSKQML 420
            I+   D    P      S+LSS +++D I +LQQQGS+A   ME +RLK D  +SK+M 
Sbjct: 361 AIVMLPDTIDLP------SYLSSQLINDHIKQLQQQGSSAVAEMEAKRLKADCQRSKEMF 420

Query: 421 QHWRKMYDNLHQFCVNELLDGNQTKNIEGN 446
           Q  RK+YDNL +FCVNELLD    +  +GN
Sbjct: 421 QQLRKVYDNLQEFCVNELLDEQTMEGSKGN 444

[Close]
BLAST of Cucsa.352310 vs. TrEMBL
Match: A0A0B0PI43_GOSAR (WD repeat-containing 18 OS=Gossypium arboreum GN=F383_07747 PE=4 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 1.2e-169
Identity = 295/447 (66.00%), Postives = 357/447 (79.87%), Query Frame = 1 

Query: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 60
           M +++ASSSID GIGCWDL TG+EQLRYK+CASPPHGL  VG +FLACSQLRDP+AT+G 
Sbjct: 1   MNVVIASSSIDGGIGCWDLQTGAEQLRYKTCASPPHGLTSVGCRFLACSQLRDPSATSGH 60

Query: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120
           +LYWSWSKPQ +VKSFPAEPI  L +N +G YIVGGG SGDIY+WEV +GRLLKKWHAHY
Sbjct: 61  LLYWSWSKPQAQVKSFPAEPIKPLIANSDGAYIVGGGSSGDIYIWEVATGRLLKKWHAHY 120

Query: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180
           RA+TCLVFSEDDSLL+SGSEDGC+RVWSL  +FDD  +++  HLYE+SFT H L VTDIV
Sbjct: 121 RAITCLVFSEDDSLLISGSEDGCVRVWSLFMIFDDVRRQQVSHLYEYSFTEHTLRVTDIV 180

Query: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
           +GYGG NAII+S+S DRTCKVWSLSKG+LLRN++FPSIIDAIA+DPGEHVFY G RDGKI
Sbjct: 181 IGYGGGNAIIVSASEDRTCKVWSLSKGRLLRNVVFPSIIDAIAIDPGEHVFYAGSRDGKI 240

Query: 241 YTAALNAKSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300
           Y AALNA+S  S +YGLHI+GS+++QSK VT LAY + G+LL+SGSEDG IRVWD +T N
Sbjct: 241 YIAALNAESSPSDNYGLHIIGSLTDQSKPVTCLAYSAEGDLLLSGSEDGMIRVWDVKTQN 300

Query: 301 VIRVFRHSKGPVNNILLVQ-QQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTG 360
           + R+FRHSKGPVNNI++V+   PL +++S SQ S RKH   LPP L K+ NS DED    
Sbjct: 301 ITRMFRHSKGPVNNIVIVRLPYPLGRAESKSQPSSRKHELSLPPPLEKYANSTDEDMDNK 360

Query: 361 VIIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATG-MELERLKHDYGKSKQMLQHW 420
            I+     P      S+LSSH+++D I +LQQQGS+A   ME +RLK D  +S +M Q  
Sbjct: 361 AIV---MLPDSIDLPSYLSSHLINDHIKQLQQQGSSAVAEMEAKRLKADCQRSMEMFQQL 420

Query: 421 RKMYDNLHQFCVNELLDGNQTKNIEGN 446
           RK+YDNL +FCVNELLD    +  +GN
Sbjct: 421 RKVYDNLQEFCVNELLDEQTMEGSKGN 444

[Close]
BLAST of Cucsa.352310 vs. TAIR10
Match: AT3G49180.1 (AT3G49180.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 504.6 bits (1298), Expect = 6.3e-143
Identity = 256/436 (58.72%), Postives = 322/436 (73.85%), Query Frame = 1 

Query: 2   VLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGSV 61
           + ++ASSSID GIG WDL TG+EQL++K CASP HGL  VG KFLA SQL     T+GS+
Sbjct: 3   ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQL-SARNTSGSI 62

Query: 62  LYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYR 121
            YWSW+KPQ EVKS+P EPI ALA+N+EGTY+VGGG SGDIYLWEV +G+LLKKWH HYR
Sbjct: 63  FYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYR 122

Query: 122 AVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVV 181
           +VTCLVFS DDSLLVSGS+DG IRVWSLI +FDD  +++   LYEH+F  H + VTDIV+
Sbjct: 123 SVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVI 182

Query: 182 GYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIY 241
            YGG NA+IISSS DRTCKVWSLS+GKLL+NIIFPS+I+A+ALDPG  VFY G RD KIY
Sbjct: 183 DYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIY 242

Query: 242 TAALNAKSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNV 301
             A+NA    +S+YG  +LGS+S + K++T LAYC+ GNLLISGSEDG + VWD ++   
Sbjct: 243 IGAINA----TSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRH 302

Query: 302 IRVFRHS----KGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEY 361
           +R   H+    KGPVNNI +V++  +  S  T Q S +    L+PP L K+E    ED  
Sbjct: 303 VRTLIHAKGSRKGPVNNIQIVRKTIVANSNKT-QVSWKSRGALIPPPLEKYERPV-EDTM 362

Query: 362 TGVI-IDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQ 421
            G++ +DP          SFLS+ ++D+Q+ ELQQQGSAAT ME+ERLK +Y +S QM +
Sbjct: 363 DGIVTVDPPPFSDVPVYSSFLSADLIDEQVKELQQQGSAATEMEMERLKLEYKRSLQMNE 422

Query: 422 HWRKMYDNLHQFCVNE 433
            W+K Y+NL Q  + E
Sbjct: 423 QWQKNYENLLQVVMEE 431

[Close]
BLAST of Cucsa.352310 vs. TAIR10
Match: AT3G18130.1 (AT3G18130.1 receptor for activated C kinase 1C)

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-13
Identity = 56/215 (26.05%), Postives = 104/215 (48.37%), Query Frame = 1 

Query: 89  EGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLVSGSEDGCIRVWS 148
           +G + + G + G++ LW++ +G   +++  H + V  + FS D+  +VS S D  I++W+
Sbjct: 74  DGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133

Query: 149 LITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISSSVDRTCKVWSLSKGK 208
            +         E K+       GH   V+ +          I+S+S D+T KVW+L   K
Sbjct: 134 TLG--------ECKYTISEG-DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCK 193

Query: 209 LLRNIIFPS-IIDAIALDPGEHVFYGGGRDGKIYTAALNAKSPSSSDYGLHILGSISNQS 268
           L  +++  S  ++ +A+ P   +   GG+DG I    L   +     Y L   GSI    
Sbjct: 194 LRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL---AEGKKLYSLE-AGSI---- 253

Query: 269 KSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNVI 303
             + SL +  +   L + +E+ +IR+WD  + +V+
Sbjct: 254 --IHSLCFSPNRYWLCAATEN-SIRIWDLESKSVV 268


HSP 2 Score: 47.8 bits (112), Expect = 2.1e-05
Identity = 52/211 (24.64%), Postives = 83/211 (39.34%), Query Frame = 1 

Query: 93  IVGGGFSGDIYLWEVLS-----GRLLKKWHAHYRAVTCLVFSEDDSLLVSGSEDGCIRVW 152
           IV       I LW++       G   ++   H   V  +V S D    +SGS DG +R+W
Sbjct: 31  IVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90

Query: 153 SLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISSSVDRTCKVWSL--- 212
            L T   +  +R         F GH   V  + V +   N  I+S+S DRT K+W+    
Sbjct: 91  DLAT--GETTRR---------FVGHTKDV--LSVAFSTDNRQIVSASRDRTIKLWNTLGE 150

Query: 213 SKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSPSSSDYGLHILGSIS 272
            K  +         +  +   P   V         I +A+ +      +     +  S+ 
Sbjct: 151 CKYTISEGDGHKEWVSCVRFSPNTLV-------PTIVSASWDKTVKVWNLQNCKLRNSLV 210

Query: 273 NQSKSVTSLAYCSSGNLLISGSEDGAIRVWD 296
             S  + ++A    G+L  SG +DG I +WD
Sbjct: 211 GHSGYLNTVAVSPDGSLCASGGKDGVILLWD 221


HSP 3 Score: 33.5 bits (75), Expect = 4.1e-01
Identity = 29/105 (27.62%), Postives = 44/105 (41.90%), Query Frame = 1 

Query: 204 LSKGKLLRNII--FPSIIDAIALD-PGEHVFYGGGRDGKIYTAALNAKSPSSSDYGLHIL 263
           +++G +L+ I+     I+ AIA       +     RD  I    L     S   YG+   
Sbjct: 1   MAEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKS---YGV-AQ 60

Query: 264 GSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNVIRVF 306
             ++  S  V  +   S G   +SGS DG +R+WD  T    R F
Sbjct: 61  RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRF 101

[Close]
BLAST of Cucsa.352310 vs. TAIR10
Match: AT1G48630.1 (AT1G48630.1 receptor for activated C kinase 1B)

HSP 1 Score: 73.6 bits (179), Expect = 3.6e-13
Identity = 63/253 (24.90%), Postives = 115/253 (45.45%), Query Frame = 1 

Query: 60  SVLYWSWSKPQVEVKSFPAEPIMALASNH---------EGTYIVGGGFSGDIYLWEVLSG 119
           S++ W  +K   E KS+          +H         +G + + G + G++ LW++ +G
Sbjct: 39  SIILWKLTK---EDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATG 98

Query: 120 RLLKKWHAHYRAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFT 179
              +++  H + V  + FS D+  +VS S D  I++W+ +         E K+    +  
Sbjct: 99  ESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLG--------ECKYTISEA-D 158

Query: 180 GHNLPVTDIVVGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPS-IIDAIALDPGEH 239
           GH   V+ +          I+S+S D+T KVW+L   KL   +   S  ++ +A+ P   
Sbjct: 159 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGS 218

Query: 240 VFYGGGRDGKIYTAALNAKSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDG 299
           +   GG+DG I    L   +     Y L   GSI      + SL +  +   L + +E+ 
Sbjct: 219 LCASGGKDGVILLWDL---AEGKKLYSLE-AGSI------IHSLCFSPNRYWLCAATEN- 268

Query: 300 AIRVWDTRTNNVI 303
           +IR+WD  + +V+
Sbjct: 279 SIRIWDLESKSVV 268

[Close]
BLAST of Cucsa.352310 vs. TAIR10
Match: AT4G02730.1 (AT4G02730.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 4.7e-13
Identity = 63/261 (24.14%), Postives = 114/261 (43.68%), Query Frame = 1 

Query: 81  IMALASNHEGTYIVGGGFSGDIYLWEVLSG-RLLKKWHAHYRAVTCLVFSEDDSLLVSGS 140
           I  LA + +  Y         + +W+  S    LK    H   V C+ F+   +L+VSGS
Sbjct: 88  ISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGS 147

Query: 141 EDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISSSVDRTC 200
            D  IR+W + T          K +       H++P++ +     G  ++I+S+S D +C
Sbjct: 148 FDETIRIWEVKT---------GKCV--RMIKAHSMPISSVHFNRDG--SLIVSASHDGSC 207

Query: 201 KVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSPSSSDYG--- 260
           K+W   +G  L+ +I      A++       F     +GK    A    +   S+Y    
Sbjct: 208 KIWDAKEGTCLKTLIDDKS-PAVS-------FAKFSPNGKFILVATLDSTLKLSNYATGK 267

Query: 261 -LHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNVIRVFRHSKGPVNNI 320
            L +    +N+   +TS    ++G  ++SGSED  + +WD +  N++   +  +G  + +
Sbjct: 268 FLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNIL---QRLEGHTDAV 324

Query: 321 LLVQQQPLPKSQSTSQGSLRK 337
           + V   P+    S+S   L K
Sbjct: 328 ISVSCHPVQNEISSSGNHLDK 324


HSP 2 Score: 63.5 bits (153), Expect = 3.7e-10
Identity = 76/312 (24.36%), Postives = 126/312 (40.38%), Query Frame = 1 

Query: 4   LVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGSVLY 63
           L+AS+S+D  +  W     S   RY+  +S    L         CS     A+   ++  
Sbjct: 57  LLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCS-----ASDDCTLRI 116

Query: 64  WSWSKPQVEVKSFPAEP--IMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYR 123
           W    P   +K        +  +  N     IV G F   I +WEV +G+ ++   AH  
Sbjct: 117 WDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSM 176

Query: 124 AVTCLVFSEDDSLLVSGSEDGCIRVWS------LITVFDDGWQREAKHLYEHSFTGHNLP 183
            ++ + F+ D SL+VS S DG  ++W       L T+ DD  +  A    + S  G    
Sbjct: 177 PISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDD--KSPAVSFAKFSPNG---- 236

Query: 184 VTDIVVGYGGFNAIIISSSVDRTCKVWSLSKGKLLR------NIIFPSIIDAIALDPGEH 243
                         I+ +++D T K+ + + GK L+      N +F  I  A ++  G++
Sbjct: 237 ------------KFILVATLDSTLKLSNYATGKFLKVYTGHTNKVF-CITSAFSVTNGKY 296

Query: 244 VFYGGGRDGKIYTAALNAKSPSSSDYGLHILGSISNQSKSVTSLA-------YCSSGNLL 295
           +   G  D  +Y   L A+         +IL  +   + +V S++         SSGN L
Sbjct: 297 I-VSGSEDNCVYLWDLQAR---------NILQRLEGHTDAVISVSCHPVQNEISSSGNHL 329


HSP 3 Score: 43.1 bits (100), Expect = 5.2e-04
Identity = 36/154 (23.38%), Postives = 66/154 (42.86%), Query Frame = 1 

Query: 165 YEHSFT--GHNLPVTDIVVGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNII-FPSIIDA 224
           Y H  T  GH   ++   V +     ++ S+SVD+T  +WS +   L+       S I  
Sbjct: 33  YRHLKTLEGHTAAIS--CVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISD 92

Query: 225 IALDPGEHVFYGGGRDGKIYTAALNAKSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNL 284
           +A     H       D  +     +A+SP         L  +   +  V  + +    NL
Sbjct: 93  LAWSSDSHYTCSASDDCTL--RIWDARSP------YECLKVLRGHTNFVFCVNFNPPSNL 152

Query: 285 LISGSEDGAIRVWDTRTNNVIRVFRHSKGPVNNI 316
           ++SGS D  IR+W+ +T   +R+ +    P++++
Sbjct: 153 IVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSV 176

[Close]
BLAST of Cucsa.352310 vs. TAIR10
Match: AT3G49660.1 (AT3G49660.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 72.8 bits (177), Expect = 6.1e-13
Identity = 52/195 (26.67%), Postives = 92/195 (47.18%), Query Frame = 1 

Query: 118 AHYRAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVT 177
           +H RAV+ + FS D  LL S S D  IR +++ T+ D      A+ + E  FTGH   ++
Sbjct: 22  SHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDP----IAEPVQE--FTGHENGIS 81

Query: 178 DIVVGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNII-FPSIIDAIALDPGEHVFYGGGR 237
           D  V +      I+S+S D+T K+W +  G L++ +I   +    +  +P  ++   G  
Sbjct: 82  D--VAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 141

Query: 238 DGKIYTAALNAKSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDT 297
           D  +    +              L  +   S  VT++ +   G+L++S S DG  R+WD+
Sbjct: 142 DETVRIWDVTTGK---------CLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDS 199

Query: 298 RTNNVIRVFRHSKGP 312
            T + ++     + P
Sbjct: 202 GTGHCVKTLIDDENP 199


HSP 2 Score: 71.2 bits (173), Expect = 1.8e-12
Identity = 55/237 (23.21%), Postives = 101/237 (42.62%), Query Frame = 1 

Query: 81  IMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLVSGSE 140
           I  +A + +  +IV       + LW+V +G L+K    H     C+ F+   +++VSGS 
Sbjct: 74  ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133

Query: 141 DGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIVVGYGGFNAIIISSSVDRTCK 200
           D  +R+W + T          K L       H+ PVT   V +    ++I+SSS D  C+
Sbjct: 134 DETVRIWDVTT---------GKCL--KVLPAHSDPVT--AVDFNRDGSLIVSSSYDGLCR 193

Query: 201 VWSLSKGKLLRNIIFPS--IIDAIALDPGEHVFYGGGRDGKIYTAALNAKSPSSSDYGLH 260
           +W    G  ++ +I      +  +   P       G  D       L   + SS+ +   
Sbjct: 194 IWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDN-----TLRLWNISSAKFLKT 253

Query: 261 ILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNVIRVFRHSKGPVNNI 316
             G + N    ++S    ++G  ++SGSED  + +W+  +  +++        V N+
Sbjct: 254 YTGHV-NAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNV 291

[Close]
BLAST of Cucsa.352310 vs. NCBI nr
Match: gi|778696168|ref|XP_011654116.1| (PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Cucumis sativus])

HSP 1 Score: 910.2 bits (2351), Expect = 1.4e-261
Identity = 445/447 (99.55%), Postives = 445/447 (99.55%), Query Frame = 1 

Query: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 60
           MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVG KFLACSQLRDPAATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGRKFLACSQLRDPAATAGS 60

Query: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120
           VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180
           RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
           VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300
           YTAALNAK PSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300

Query: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 360
           VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 360

Query: 361 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 420
           IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK
Sbjct: 361 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 420

Query: 421 MYDNLHQFCVNELLDGNQTKNIEGNST 448
           MYDNLHQFCVNELLDGNQTKNIEGNST
Sbjct: 421 MYDNLHQFCVNELLDGNQTKNIEGNST 447

[Close]
BLAST of Cucsa.352310 vs. NCBI nr
Match: gi|659103300|ref|XP_008452567.1| (PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Cucumis melo])

HSP 1 Score: 886.7 bits (2290), Expect = 1.7e-254
Identity = 433/447 (96.87%), Postives = 439/447 (98.21%), Query Frame = 1 

Query: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 60
           MVLLVASSSIDSGIGCWDLHTG+EQLRYKSCASPPHGLVCVG KFLACSQLRD AATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 60

Query: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120
           VLYWSW KPQVEVKSFPAEPIMALASN+EGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180
           RAVTCLVFSEDDSLL+SGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
           VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300
           YTAALNAK PSSSDYGLHILGS+SNQSKSVTSLAYCSSGNLLISG EDGAIRVWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 300

Query: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 360
           VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRP+LPPALAKFENSKDEDEYTGV
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGV 360

Query: 361 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 420
           IIDPSGPPKES  FSFLSSHVMD+QITELQQQGSAAT MELERLKHDYGKSKQMLQHWRK
Sbjct: 361 IIDPSGPPKESMEFSFLSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQHWRK 420

Query: 421 MYDNLHQFCVNELLDGNQTKNIEGNST 448
           MYDNLHQFCVNELLDGNQTKNIEGNST
Sbjct: 421 MYDNLHQFCVNELLDGNQTKNIEGNST 447

[Close]
BLAST of Cucsa.352310 vs. NCBI nr
Match: gi|590592160|ref|XP_007017201.1| (WD-repeat protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 608.2 bits (1567), Expect = 1.1e-170
Identity = 299/448 (66.74%), Postives = 360/448 (80.36%), Query Frame = 1 

Query: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 60
           M +++ASSSID GIGCWDL TG+EQLRYK+CASPPHGLV VG +FLA SQLRDP+AT+G 
Sbjct: 1   MDVVIASSSIDGGIGCWDLQTGAEQLRYKTCASPPHGLVSVGRRFLASSQLRDPSATSGH 60

Query: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120
           VLYWSWSKPQ EVKSFPAEPI  LA++ EG+YIVGGG SGDIYLWEV +GRLLKKWHAHY
Sbjct: 61  VLYWSWSKPQAEVKSFPAEPIKPLAADSEGSYIVGGGSSGDIYLWEVATGRLLKKWHAHY 120

Query: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180
           RAVTCLVFSED+SL++SGS+DGC+RVWSL  +FDD  +++A HLYE+SFT H L VTDI+
Sbjct: 121 RAVTCLVFSEDNSLVISGSDDGCVRVWSLFLIFDDVRRQQASHLYEYSFTEHTLCVTDII 180

Query: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
           +GYGG +AII+S+S DRTCKVWSLS+G+LLRNI+FPSIIDAIALDPGEHVFY G RDGKI
Sbjct: 181 MGYGGGSAIIVSASEDRTCKVWSLSRGRLLRNIVFPSIIDAIALDPGEHVFYAGSRDGKI 240

Query: 241 YTAALNAKSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300
           Y AALNA+S  S+ YGLHI+GS+S+ SK+VT LAY +  NLL+SGSEDG +RVWD +T N
Sbjct: 241 YIAALNAESSPSNSYGLHIIGSLSDHSKAVTCLAYSTERNLLLSGSEDGMVRVWDVKTQN 300

Query: 301 VIRVFRHSKGPVNNILLVQQQ-PLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTG 360
           +IR+FRH+KGPVNNIL+V +   L +++S +QG  R+H   LPP L K+ NS DED    
Sbjct: 301 IIRMFRHAKGPVNNILIVSRPLSLGRAESNAQGFSRRHGSSLPPPLEKYANSTDEDMDNK 360

Query: 361 VIIDPSGPPKESTGFSFLSSHVMDDQITELQQQG-SAATGMELERLKHDYGKSKQMLQHW 420
            II+        T  S+LSS +++D I ELQQQG SAA  ME+E LK D  +S  M+Q W
Sbjct: 361 AIINLPATSNLPTDASYLSSQLINDHIKELQQQGSSAAVEMEVEILKLDCKRSMPMVQQW 420

Query: 421 RKMYDNLHQFCVNELLDGNQTKNIEGNS 447
           +K Y NL +FCVNELLDG Q    EGNS
Sbjct: 421 KKNYYNLQEFCVNELLDGEQMGGSEGNS 448

[Close]
BLAST of Cucsa.352310 vs. NCBI nr
Match: gi|596131332|ref|XP_007222168.1| (hypothetical protein PRUPE_ppa005814mg [Prunus persica])

HSP 1 Score: 605.9 bits (1561), Expect = 5.7e-170
Identity = 299/446 (67.04%), Postives = 356/446 (79.82%), Query Frame = 1 

Query: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 60
           M ++VASSSI++GIGCWDLHTG+EQLRYK CASPPHGLVCVG +FLA SQLR+P+A +GS
Sbjct: 1   MDVVVASSSIEAGIGCWDLHTGAEQLRYKLCASPPHGLVCVGQRFLASSQLREPSA-SGS 60

Query: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120
           V YWSWSKPQV+VKSFPAE I  LA+N EGTYIVGGG SG+IYLWEV SGRLLKKWHAHY
Sbjct: 61  VQYWSWSKPQVDVKSFPAEQIKPLAANSEGTYIVGGGLSGNIYLWEVASGRLLKKWHAHY 120

Query: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180
           RAV+CLVFS+DDSLL+SGSEDG IRVWSL+ +FDD  +++   LYEH FTGH L VTD+V
Sbjct: 121 RAVSCLVFSDDDSLLISGSEDGGIRVWSLLLIFDDFRRQQRSQLYEHDFTGHALCVTDVV 180

Query: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
            GYGG NAII+S+S+DR CKVWS+SKGKLLRNI+FP+I+DAIALDPGEHVF+ GGRDGKI
Sbjct: 181 TGYGGGNAIIVSASLDRRCKVWSISKGKLLRNIVFPTIVDAIALDPGEHVFFAGGRDGKI 240

Query: 241 YTAALNAKSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300
           Y AALNA+S S S YGLHI+   SN S +VT L Y  SGN LISGSEDG +RVWD +++N
Sbjct: 241 YVAALNAESTSDSKYGLHIINCFSNHSNTVTCLVYSISGNCLISGSEDGVVRVWDAKSHN 300

Query: 301 VIRVFRHSKGPVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGV 360
           +IRVF+H+KGPVNNIL+++QQ    SQ  SQ S R+H   LPP L K+  ++D  +   V
Sbjct: 301 IIRVFKHAKGPVNNILVIRQQ---LSQMNSQSSSRRHGSSLPPPLEKYPIAEDPTDLKAV 360

Query: 361 IIDPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQHWRK 420
            I        ST   +  S  ++ QI ELQQQGSA+  ME+ERLKHDY +S QM+Q W+K
Sbjct: 361 -IGRQATCSNSTEALYPRSDGINGQIKELQQQGSASAEMEIERLKHDYERSIQMVQQWKK 420

Query: 421 MYDNLHQFCVNELLDGNQTKNIEGNS 447
           MYDNLHQFCVNELLDG+Q     GN+
Sbjct: 421 MYDNLHQFCVNELLDGDQVGIPNGNA 441

[Close]
BLAST of Cucsa.352310 vs. NCBI nr
Match: gi|823239035|ref|XP_012452176.1| (PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Gossypium raimondii])

HSP 1 Score: 605.1 bits (1559), Expect = 9.7e-170
Identity = 296/450 (65.78%), Postives = 357/450 (79.33%), Query Frame = 1 

Query: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGGKFLACSQLRDPAATAGS 60
           M +++ASSSID GIGCWDL TG+EQLRYK+CASPPHGL  VG +FLACSQLRDP+AT+G 
Sbjct: 1   MSVVIASSSIDGGIGCWDLQTGAEQLRYKTCASPPHGLTTVGCRFLACSQLRDPSATSGH 60

Query: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120
           +LYWSWSKPQ +VKSFP EPI  L +N +GTYIVGGG SGDIY+WEV +GRLLKKWHAHY
Sbjct: 61  LLYWSWSKPQAQVKSFPVEPIKPLIANSDGTYIVGGGSSGDIYIWEVATGRLLKKWHAHY 120

Query: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180
           RA+TCLVFSEDDSLL+SGSEDGC+RVWSL  +FDD  +++  HLYE+SFT H L VTDIV
Sbjct: 121 RAITCLVFSEDDSLLISGSEDGCVRVWSLFMIFDDVRRQQVSHLYEYSFTEHTLRVTDIV 180

Query: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
           +GYGG NAII+S+S DRTCKVWSLSKG+LLRN++FPSIIDAIA+DPGEHVFY G RDGKI
Sbjct: 181 IGYGGGNAIIVSASEDRTCKVWSLSKGRLLRNVVFPSIIDAIAIDPGEHVFYAGSRDGKI 240

Query: 241 YTAALNAKSPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300
           Y  ALNA+S  S +YGLHI+GS+++QSK VT LAY + GNLL+SGSEDG IRVWD +T N
Sbjct: 241 YITALNAESSPSDNYGLHIIGSLTDQSKPVTCLAYSAEGNLLLSGSEDGMIRVWDVKTQN 300

Query: 301 VIRVFRHSKGPVNNILLVQ-QQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTG 360
           + R+FRHSKGPVNNI++V+   PL +++S SQ S RKH   LPP L K+ NS DED    
Sbjct: 301 ITRMFRHSKGPVNNIVIVRLPYPLGRAESKSQPSSRKHELSLPPPLEKYANSSDEDMDNK 360

Query: 361 VII---DPSGPPKESTGFSFLSSHVMDDQITELQQQGSAATG-MELERLKHDYGKSKQML 420
            I+   D    P      S+LSS +++D I +LQQQGS+A   ME +RLK D  +SK+M 
Sbjct: 361 AIVMLPDTIDLP------SYLSSQLINDHIKQLQQQGSSAVAEMEAKRLKADCQRSKEMF 420

Query: 421 QHWRKMYDNLHQFCVNELLDGNQTKNIEGN 446
           Q  RK+YDNL +FCVNELLD    +  +GN
Sbjct: 421 QQLRKVYDNLQEFCVNELLDEQTMEGSKGN 444

The following BLAST results are available for this feature:
BLAST of Cucsa.352310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RID3_ARATH1.1e-14158.72Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana GN=RID3 PE=1 SV=1[more]
WDR18_BOVIN7.2e-4032.80WD repeat-containing protein 18 OS=Bos taurus GN=WDR18 PE=2 SV=1[more]
WDR18_HUMAN9.4e-4032.79WD repeat-containing protein 18 OS=Homo sapiens GN=WDR18 PE=1 SV=2[more]
WDR18_RAT1.4e-3831.73WD repeat-containing protein 18 OS=Rattus norvegicus GN=Wdr18 PE=2 SV=1[more]
WDR18_MOUSE3.9e-3831.63WD repeat-containing protein 18 OS=Mus musculus GN=Wdr18 PE=1 SV=1[more]
BLAST of Cucsa.352310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZT0_CUCSA9.8e-26299.55Uncharacterized protein OS=Cucumis sativus GN=Csa_4G639920 PE=4 SV=1[more]
A0A061FBK5_THECC8.0e-17166.74WD-repeat protein, putative isoform 1 OS=Theobroma cacao GN=TCM_033817 PE=4 SV=1[more]
M5XB85_PRUPE4.0e-17067.04Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005814mg PE=4 SV=1[more]
A0A0D2U4L3_GOSRA6.7e-17065.78Uncharacterized protein OS=Gossypium raimondii GN=B456_010G020600 PE=4 SV=1[more]
A0A0B0PI43_GOSAR1.2e-16966.00WD repeat-containing 18 OS=Gossypium arboreum GN=F383_07747 PE=4 SV=1[more]
BLAST of Cucsa.352310 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G49180.16.3e-14358.72 Transducin/WD40 repeat-like superfamily protein[more]
AT3G18130.11.2e-1326.05 receptor for activated C kinase 1C[more]
AT1G48630.13.6e-1324.90 receptor for activated C kinase 1B[more]
AT4G02730.14.7e-1324.14 Transducin/WD40 repeat-like superfamily protein[more]
AT3G49660.16.1e-1326.67 Transducin/WD40 repeat-like superfamily protein[more]
BLAST of Cucsa.352310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778696168|ref|XP_011654116.1|1.4e-26199.55PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Cucumis sativus][more]
gi|659103300|ref|XP_008452567.1|1.7e-25496.87PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Cucumis melo][more]
gi|590592160|ref|XP_007017201.1|1.1e-17066.74WD-repeat protein, putative isoform 1 [Theobroma cacao][more]
gi|596131332|ref|XP_007222168.1|5.7e-17067.04hypothetical protein PRUPE_ppa005814mg [Prunus persica][more]
gi|823239035|ref|XP_012452176.1|9.7e-17065.78PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR020472G-protein_beta_WD-40_rep
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902184 negative regulation of shoot apical meristem development
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.352310.1Cucsa.352310.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 167..203
score: 0.0034coord: 262..295
score: 2.0E-6coord: 111..148
score: 3.
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 256..295
score: 6.2E-7coord: 109..148
score: 3.2E-10coord: 206..244
score: 350.0coord: 69..106
score: 1.0coord: 162..203
score: 0.
IPR001680WD40 repeatPROFILEPS50082WD_REPEATS_2coord: 116..149
score: 14.118coord: 169..212
score: 9.606coord: 263..304
score: 16
IPR015943WD40/YVTN repeat-like-containing domainGENE3DG3DSA:2.130.10.10coord: 5..317
score: 6.4
IPR017986WD40-repeat-containing domainPROFILEPS50294WD_REPEATS_REGIONcoord: 74..304
score: 25
IPR017986WD40-repeat-containing domainunknownSSF50978WD40 repeat-likecoord: 5..317
score: 1.39
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 282..296
scor
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 282..296
score: 3.3E-8coord: 135..149
score: 3.3E-8coord: 190..204
score: 3.
NoneNo IPR availablePANTHERPTHR18763WD-REPEAT PROTEIN 18coord: 4..438
score: 3.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.352310Cla020659Watermelon (97103) v1cgywmB631
Cucsa.352310Csa4G639920Cucumber (Chinese Long) v2cgycuB494
Cucsa.352310MELO3C016764Melon (DHL92) v3.5.1cgymeB570
Cucsa.352310ClCG05G019990Watermelon (Charleston Gray)cgywcgB599
Cucsa.352310CSPI04G24210Wild cucumber (PI 183967)cgycpiB521
Cucsa.352310CmaCh09G002380Cucurbita maxima (Rimu)cgycmaB0960
Cucsa.352310CmaCh01G018330Cucurbita maxima (Rimu)cgycmaB0965
Cucsa.352310CmoCh09G002300Cucurbita moschata (Rifu)cgycmoB0961
Cucsa.352310Lsi04G015490Bottle gourd (USVL1VR-Ls)cgylsiB570
Cucsa.352310Cp4.1LG02g06810Cucurbita pepo (Zucchini)cgycpeB0921
Cucsa.352310Cp4.1LG06g01810Cucurbita pepo (Zucchini)cgycpeB0923
Cucsa.352310MELO3C016764.2Melon (DHL92) v3.6.1cgymedB571
Cucsa.352310CsaV3_4G034460Cucumber (Chinese Long) v3cgycucB536
Cucsa.352310Cla97C05G101650Watermelon (97103) v2cgywmbB602
Cucsa.352310Bhi09G002719Wax gourdcgywgoB706
Cucsa.352310Carg26317Silver-seed gourdcarcgyB0903
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.352310Watermelon (97103) v2cgywmbB598
Cucsa.352310Watermelon (97103) v2cgywmbB601
Cucsa.352310Watermelon (97103) v2cgywmbB605
Cucsa.352310Watermelon (97103) v2cgywmbB606
Cucsa.352310Wax gourdcgywgoB702
Cucsa.352310Wax gourdcgywgoB705
Cucsa.352310Cucumber (Gy14) v1cgycgyB049
Cucsa.352310Cucumber (Gy14) v1cgycgyB118
Cucsa.352310Cucumber (Gy14) v1cgycgyB148
Cucsa.352310Cucurbita maxima (Rimu)cgycmaB0961
Cucsa.352310Cucurbita maxima (Rimu)cgycmaB0964
Cucsa.352310Cucurbita maxima (Rimu)cgycmaB0966
Cucsa.352310Cucurbita maxima (Rimu)cgycmaB0967
Cucsa.352310Cucurbita maxima (Rimu)cgycmaB0968
Cucsa.352310Cucurbita moschata (Rifu)cgycmoB0969
Cucsa.352310Cucurbita moschata (Rifu)cgycmoB0962
Cucsa.352310Cucurbita moschata (Rifu)cgycmoB0963
Cucsa.352310Cucurbita moschata (Rifu)cgycmoB0966
Cucsa.352310Cucurbita moschata (Rifu)cgycmoB0967
Cucsa.352310Cucurbita moschata (Rifu)cgycmoB0968
Cucsa.352310Cucurbita moschata (Rifu)cgycmoB0970
Cucsa.352310Wild cucumber (PI 183967)cgycpiB520
Cucsa.352310Wild cucumber (PI 183967)cgycpiB524
Cucsa.352310Wild cucumber (PI 183967)cgycpiB525
Cucsa.352310Cucumber (Chinese Long) v2cgycuB493
Cucsa.352310Cucumber (Chinese Long) v2cgycuB497
Cucsa.352310Melon (DHL92) v3.5.1cgymeB567
Cucsa.352310Melon (DHL92) v3.5.1cgymeB568
Cucsa.352310Melon (DHL92) v3.5.1cgymeB572
Cucsa.352310Watermelon (Charleston Gray)cgywcgB598
Cucsa.352310Watermelon (Charleston Gray)cgywcgB602
Cucsa.352310Watermelon (Charleston Gray)cgywcgB603
Cucsa.352310Watermelon (97103) v1cgywmB630
Cucsa.352310Watermelon (97103) v1cgywmB634
Cucsa.352310Watermelon (97103) v1cgywmB636
Cucsa.352310Cucurbita pepo (Zucchini)cgycpeB0918
Cucsa.352310Cucurbita pepo (Zucchini)cgycpeB0919
Cucsa.352310Cucurbita pepo (Zucchini)cgycpeB0920
Cucsa.352310Cucurbita pepo (Zucchini)cgycpeB0922
Cucsa.352310Cucurbita pepo (Zucchini)cgycpeB0924
Cucsa.352310Bottle gourd (USVL1VR-Ls)cgylsiB566
Cucsa.352310Bottle gourd (USVL1VR-Ls)cgylsiB571
Cucsa.352310Melon (DHL92) v3.6.1cgymedB568
Cucsa.352310Melon (DHL92) v3.6.1cgymedB569
Cucsa.352310Melon (DHL92) v3.6.1cgymedB573
Cucsa.352310Silver-seed gourdcarcgyB0224
Cucsa.352310Silver-seed gourdcarcgyB0877
Cucsa.352310Silver-seed gourdcarcgyB0878
Cucsa.352310Silver-seed gourdcarcgyB0902
Cucsa.352310Cucumber (Chinese Long) v3cgycucB535
Cucsa.352310Cucumber (Chinese Long) v3cgycucB538
Cucsa.352310Cucumber (Chinese Long) v3cgycucB540