Cucsa.349350 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.349350
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	BnaC03g57680D protein
Location	scaffold03487 : 624897 .. 629451 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTAATTTAACCTATTTATCATATTATTGTTTCGTTTTGAGAGAGATCGGCATAGAACCGAAGCTTTTGAGGGGAAACTTACACAGAGAAGCTCGGGCGGGGAAGGAGATGGCGGGTGCATTTTGGGGGACACGGGTATTGGAGATTGTGAAGAAGCATGATTCGGGAGGTTTAGTCTGGAAGAGAATCAAGCTCACCACAACTCGTAAAGCCAACGCCAAAAAAAGGCTTCATCGCGTTTGGCAGGTTTTTTTTtCTTCATCCCAATTTCAGTCTCACTATCATTTTTCTGTTTATGCACGCCATTAATTTGTGTTAGAAGAGTCTCTGGAGGTTCGTTTGGAAATAGCGAGTACTTGATTATCCCATCGTCAGTGTGGAAGCAAATTAAGTAGATTAGGAGACTCTTTAGCTTGTTTTGATATATGCATTGGAATGACGTTTTCTGTAAGCTGTGTAGAAAATATTGGAAACCATGTTAATATTACGTACTAAGTGAGACCGAGGGTCCTCATTTCGTTATTTCCCATTGTTTAATTGGGATTTTTGTGGAGTACAACACATTAGTGGCTGAGAAACTTTAAAACACCTGTGGAGGATACCCTAACATGCAATGGGAGAATGGTGAATGTGAGATGGTTCTGATCTTCTAAGGATTTTTTTACAAAGAATATACCAACTTGGAGTCAAAGAACATCTGGGGTTCCTTCGTCTGCAATCTGTTTGGGATTGTAACCCTTCCAATGATAGGTTCCATAGAATTAATTTACTTCTTAGTAACTATGTCTTTCCAGATAGATTGTATAAGAATATTGTCGAGAGGATTCTAGTATTAGGATGCTGGTTTGTAGAAAGAAAGGTCAATGAGGTTATGCAAAAGATATATGGATTTTTGTCTCCAAATGTGAGAGAGGCTCTTATAAACGATGAATATCAGGCCTCACGATTTTCAAATCACCTGTCTTTGAGAATCGAAAAGTTTTGGAAAATAAACTTCAGCTGGATGGCTTAAAATCCAACTACCTTTTGAAAAAGGAATTAATCTTCTTTACCTATCTTCGAAGAATATTGATTCTCCATGACCTTCTAACTTCCAGATGGAGTTTTTTtAGTTAAGGATTCTTGTAACTATTGTTTTTTTTtATTCATGCTATGCGGACCATTTTGTCACCTCCTTGGCTAGAGCGAGTTGGAGAAAGAGTTATCTTTCACTGGAGTCTTCCTTTTATGTGCATGTTTATGTTTTGGCGACACATCTTATCTTAAAAAAaGGTTTTTTTtAATATGAAACATTAGCTTTCCAATTCATATTGACGATTGCTTTCACTCAAGTTGTAGAACATTTCAAGTTAGATGAACCTTGAATAAATCTTCATGGACAAAATCAAAATTGGGTATACACATAGAAAGCAAATCAACCAAGGTCAAGGAATATGTAAAATAACTTTTATGTTAAGAGGGATTTAGGGGCGTGGACCATTGAACAAATGTTCTTCAAAAATCTAAATCGTACTTCTGAAGCTGCATAGAGTGACAATGAGCCATGAACTAGTGCTACTTAACCATTCAAACTCTGCATTCATAAAAGGAACCAATGACTCAGATACTCATGGTTATAAGAAAAGAGAGAAAAAAAAGAAAaGTAAAAGAAAGAGACCACTTGAAAaTAAGGCTTGAGGGTACAAGGAGATCAAAGAGGATGAAGCCATTAAATTTGTTTTTTGACTTTGATCTAACTTGGGAAAGCAACATTTAAGGTTATGCAACACACCTATGTTGGCTAAATAGCTTTGACACATTTCCATTGTGCTTGATTTTCTATGGCATAGGATTATTGTTAGTAAGTATTAATGTTTAAGGTGTAGCCGGGTGCTTGCTTGAGGCGAGGCGAGGTCTTGACGGCTTGCAAGTACCCAAGGCAAGCACCTTTAGTAAGGCACTTGCCTTTTGTGCCTTTCAGTTGCCTTGAATATAGTTCAGAGTGACCAGGCACTCACCTTGTTCAATTACTCAACTTTTTTtAGAAAAGAAAACATTCTTATCCAATAGGATTAAAAGGAAGTATCAAAGTTTTTAAAGGTAGAATTAAAGAAAAATTGAAGAAAGGAAGGAGAATTGTAGAAGAAAAAGAGTCACAGTAGAAACAATATCATTTTTATTTCTGTATCTTCTTTTAAACATTCTTTTCCTCAAGATTATTTGAGTTTATTTCTTTCTAACCTTATATATTATTTATTTATTATTGTTATTATTTTGTTAATTGCACCTTGCTTCAATCAAGAGACTCCTTTTGGGCCTTAGGGTGCGCCTTGCGCTTTGAAAACACTGTTAAGTATGACCTCCATCTCTTTGAAGGGTTGTTCAGAGGGGCTATATAGGTAGAAATTGGAATCTTTAGAAAGATATTTCTTTCGAGTTCTTTTCCTCCTCGCTTCTTCTTCGTTGTGTTGTGGGTGAAGGTAAGCAGTTGTATTTTTAAGAACCAGTGGGTGGGGGATAGACCCCTTTGCTTTGCGTTTCCTCACTTATACCATTTCTTCCTTTAAAAATCGTTTGGTTTATGATTTCTTTGTTTGGCTAGGGATCTTAATATCTTTCTCCCTTGCTTAACGTTGTTTGTTGTCTGATAGGGAAATGACGGAGGTAGCCACTCCACTAGTTTGTCTTTGCTTGGTGAGTTCAATTTAGACTTTGGGAGAACTTGGAGTACAGATGTTCGTGTTTGGAATCCTGATTCTATTGAGGGTTTTTCTTGTTCCTTCTGACTGTTGTTGGAACCCTTTTTCTGCTAGTGAGTCAGTCTTTGATGTGCTCTAGAGGATTATATTCCTTAAAAAGTTGAGTTCTTTACCCGAAAAGTCTTACTTGGTTGTGTGAACACTTTGATAGGCTTCTAAGAAAGATGCCTACTTCAATGGGCCCTTCCTTGTTGTATTCTTTCTTAGAAGGTAGAAAAAGACTTGGATCACTTTCTTTAGAGTTGTCAGTTTGTGAGATTTGTGTGAAATTACTTATTTTAGTGGTTTGATCTTGAGTTAACTTGTTAGAGAGATGTTACCTGATAATTGCGGAGTTCTTCCTCCATCCATCTTTCTTCAAGAAAAGCCTCTTCTTATTGTCTGCTGCCTGCTGGGGTTTGGAACAACAATTCTCAGAGGTGTGGGGAGGGACCTTCGTGATGCTTGGTTCTTGATGAGGTTCTATGTTTCTCAAGGCTGCGTTTTCAAAGAATTTATTTTTtCTTTTGGTAATTATGCCCTTGTATTCTTTCATCTTTTTCCTCAATAAAAGCCGTTTCTATTTAAATGTGAAAAATTTCTTTGGAACAACTAGATTATTAGGGCTTCCTTTTGGACCATTTGGGGTGAGCAAAATACATGTGTTTCCAAGACAAAGAAAGATGATCTTAATTTATTTACTTATTTTTATTTGTCTTGATGACTATGACTTGCTGTAATAAGTACCCTTAGTTCCAAAATTATGCTCTCCTTTCTCCCCTACCATTAGAAATGTTAAAGTAATTCTTAGGAGTGGGAGAATTTACCTTCTGTACATACTTTCACCCTGTCTACGAAATTATAGTCGTTTCTCTCAAAAGAAAAAAGAGCTAGAAACTCATTTCTTCTTTTGGAAGTACCGAGGCTCTTGTTGTTAGTTGCAAGATGTTTTCTTCCATAACGCTTCTCTCATGTTGGCAACAACAAGAAAATTAGATTTTGGGAGTGCCTGTCCTTATAAATTTTCTGACCTCCCGAGACATTATCCTTTCTCTAATAACAACAATTGGATTATTAGCATGGTTAGAGATGGACCATCAATCTTAGAAGAAATCTGGATGTTGCAGATGCAGAGTGGATCTCTCTCACCAACATCGTTAGAGACATATCTTAATGACATGTTTTCTTCAATGGTCCCTATGCTTCAAATTCCTGTGTTCATCACTTCAAAGTGGGCCACTCTTCTAAAGGATCCCCAAACAACCTTTCTCTTATCTGTGGAGGTTTTTCCCTTTAAAACGGAATGACAGAATTCTCTGAGCAAGAAAAATCTTTAAATCTTTAACTATTTTTTTTTtGAAAAAAAaTTaTCTTTGTAGTTGCAACTTGGGGTAGCTTCCCTAGAATGATCTCTCTCCAGTCTCCCCTCTCTGTGCGTGTAAATTGCATTTAATCATTGGAACTGTCTCTTATAAAAGAAAAGGAAAGAAAAGAAATTAAAGAATTGCTGTCCTGCTTTTGATGCATGGATTTCAAAGTTTTCAAGTTGTTTTCGTAACCCTTTTTTTtAAAGTGGAATGTTTATTCAGTGAAATTAAATTTTCGAGGGCCAGCATAGATATTTACTGTTTAGCTGTTTGAGTTGCATGATTTACATATTGCTTTTTTAATATCATGTTACATTACTAGTGCAAGAACCACTTTTAAACTATTGATGTGTGTTCTAAATTCATATTATTACTTCTTTCCAGAATGAAGCTGTTTTGAAGGCATGCTCTGAGCCACCTCCGCCGAAATCTTCAGGAGATAATATTAGTCAAGTTGAAAAAAATGAGTAG

mRNA sequence

TGTAATTTAACCTATTTATCATATTATTGTTTCGTTTTGAGAGAGATCGGCATAGAACCGAAGCTTTTGAGGGGAAACTTACACAGAGAAGCTCGGGCGGGGAAGGAGATGGCGGGTGCATTTTGGGGGACACGGGTATTGGAGATTGTGAAGAAGCATGATTCGGGAGGTTTAGTCTGGAAGAGAATCAAGCTCACCACAACTCGTAAAGCCAACGCCAAAAAAAGGCTTCATCGCGTTTGGCAGAATGAAGCTGTTTTGAAGGCATGCTCTGAGCCACCTCCGCCGAAATCTTCAGGAGATAATATTAGTCAAGTTGAAAAAAATGAGTAG

Coding sequence (CDS)

TGTAATTTAACCTATTTATCATATTATTGTTTCGTTTTGAGAGAGATCGGCATAGAACCGAAGCTTTTGAGGGGAAACTTACACAGAGAAGCTCGGGCGGGGAAGGAGATGGCGGGTGCATTTTGGGGGACACGGGTATTGGAGATTGTGAAGAAGCATGATTCGGGAGGTTTAGTCTGGAAGAGAATCAAGCTCACCACAACTCGTAAAGCCAACGCCAAAAAAAGGCTTCATCGCGTTTGGCAGAATGAAGCTGTTTTGAAGGCATGCTCTGAGCCACCTCCGCCGAAATCTTCAGGAGATAATATTAGTCAAGTTGAAAAAAATGAGTAG

Protein sequence

CNLTYLSYYCFVLREIGIEPKLLRGNLHREARAGKEMAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPPKSSGDNISQVEKNE*

Homology

[Close]

BLAST of Cucsa.349350 vs. TrEMBL
Match: A0A0A0KDH2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G092000 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.7e-35
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1


Query: 37  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 96
           MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP
Sbjct: 1   MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 60

Query: 97  KSSGDNISQVEKNE 111
           KSSGDNISQVEKNE
Sbjct: 61  KSSGDNISQVEKNE 74

[Close]

BLAST of Cucsa.349350 vs. TrEMBL
Match: A0A0D2TNI7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G125400 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 8.6e-26
Identity = 56/63 (88.89%), Postives = 62/63 (98.41%), Query Frame = 1


Query: 37  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 96
           MAGAFWGTRV+EIVKKHDSGGLVWKRIKLT+TRKANAKKRLHRVWQNEAVL+AC+EPPP 
Sbjct: 1   MAGAFWGTRVMEIVKKHDSGGLVWKRIKLTSTRKANAKKRLHRVWQNEAVLRACAEPPPS 60

Query: 97  KSS 100
           K++
Sbjct: 61  KAT 63

[Close]

BLAST of Cucsa.349350 vs. TrEMBL
Match: V4TFF7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033198mg PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.3e-25
Identity = 57/63 (90.48%), Postives = 60/63 (95.24%), Query Frame = 1


Query: 37  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 96
           M GAFWGTRV+EIVKKHDSGGLVWKRIKLTTTRKANAKKRL RVWQNEAVL+ACSEPPP 
Sbjct: 3   MGGAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLRACSEPPPS 62

Query: 97  KSS 100
           K+S
Sbjct: 63  KTS 65

[Close]

BLAST of Cucsa.349350 vs. TrEMBL
Match: A0A067LEX0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10753 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.3e-25
Identity = 58/73 (79.45%), Postives = 63/73 (86.30%), Query Frame = 1


Query: 37  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 96
           M GAFWGTRV+EIVKKHDSGGLVWKRIKLTTTRKANAKKRL RVWQNEAVL+AC+EPPP 
Sbjct: 1   MVGAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLRACAEPPPS 60

Query: 97  KSSGDNISQVEKN 110
            +  D    VEK+
Sbjct: 61  ITKADVAGVVEKD 73

[Close]

BLAST of Cucsa.349350 vs. TrEMBL
Match: B9RH26_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1446310 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.3e-25
Identity = 57/63 (90.48%), Postives = 60/63 (95.24%), Query Frame = 1


Query: 37  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 96
           M GAFWGTRV+EIVKKHDSGGLVWKRIKLTTTRKANAKKRL RVWQNEAVLKAC+EPPP 
Sbjct: 1   MLGAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACAEPPPS 60

Query: 97  KSS 100
           K+S
Sbjct: 61  KTS 63

[Close]

BLAST of Cucsa.349350 vs. TAIR10
Match: AT1G27435.1 (AT1G27435.1 unknown protein)

HSP 1 Score: 105.9 bits (263), Expect = 1.6e-23
Identity = 49/71 (69.01%), Postives = 56/71 (78.87%), Query Frame = 1


Query: 39  GAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPPKS 98
           GAFWGTRV+E+VKKHDSGGL+WKRIKLT TRKANAK RL RVWQNEAVL+AC E   P  
Sbjct: 6   GAFWGTRVMELVKKHDSGGLLWKRIKLTPTRKANAKTRLRRVWQNEAVLRACGESDAPNP 65

Query: 99  SGDNISQVEKN 110
            G + ++   N
Sbjct: 66  PGASNTKSSSN 76

[Close]

BLAST of Cucsa.349350 vs. NCBI nr
Match: gi|449445578|ref|XP_004140549.1| (PREDICTED: uncharacterized protein LOC101220585 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 3.8e-35
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1


Query: 37  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 96
           MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP
Sbjct: 1   MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 60

Query: 97  KSSGDNISQVEKNE 111
           KSSGDNISQVEKNE
Sbjct: 61  KSSGDNISQVEKNE 74

[Close]

BLAST of Cucsa.349350 vs. NCBI nr
Match: gi|659119884|ref|XP_008459894.1| (PREDICTED: uncharacterized protein LOC103498876 [Cucumis melo])

HSP 1 Score: 152.1 bits (383), Expect = 5.6e-34
Identity = 72/74 (97.30%), Postives = 72/74 (97.30%), Query Frame = 1


Query: 37  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 96
           MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP
Sbjct: 1   MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 60

Query: 97  KSSGDNISQVEKNE 111
           KSSGD I QVEKNE
Sbjct: 61  KSSGDKIGQVEKNE 74

[Close]

BLAST of Cucsa.349350 vs. NCBI nr
Match: gi|470149174|ref|XP_004310116.1| (PREDICTED: uncharacterized protein LOC101295884 [Fragaria vesca subsp. vesca])

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-26
Identity = 61/70 (87.14%), Postives = 65/70 (92.86%), Query Frame = 1


Query: 37  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 96
           MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRL RVWQNEAVL+AC+EPPP 
Sbjct: 1   MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLRACAEPPPS 60

Query: 97  KSSGDNISQV 107
           KS G + S+V
Sbjct: 61  KSPGLDASEV 70

[Close]

BLAST of Cucsa.349350 vs. NCBI nr
Match: gi|1012118472|ref|XP_015961722.1| (PREDICTED: uncharacterized protein LOC107485711 [Arachis duranensis])

HSP 1 Score: 125.6 bits (314), Expect = 5.6e-26
Identity = 59/71 (83.10%), Postives = 63/71 (88.73%), Query Frame = 1


Query: 39  GAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPPKS 98
           G FWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRL RVWQNEAVL+ACSEPPPPKS
Sbjct: 2   GVFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLRACSEPPPPKS 61

Query: 99  SGDNISQVEKN 110
           S  + ++   N
Sbjct: 62  SSASSNKAHDN 72

[Close]

BLAST of Cucsa.349350 vs. NCBI nr
Match: gi|1009167733|ref|XP_015902278.1| (PREDICTED: uncharacterized protein LOC107435231 [Ziziphus jujuba])

HSP 1 Score: 124.8 bits (312), Expect = 9.5e-26
Identity = 58/64 (90.62%), Postives = 62/64 (96.88%), Query Frame = 1


Query: 37  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 96
           MAGAFWGTRV+EIVKKHDSGGLVWKRIKLT+TRKANAKKRL RVWQNEAVLKACSEPPP 
Sbjct: 1   MAGAFWGTRVMEIVKKHDSGGLVWKRIKLTSTRKANAKKRLLRVWQNEAVLKACSEPPPS 60

Query: 97  KSSG 101
           K++G
Sbjct: 61  KTAG 64

The following BLAST results are available for this feature:

BLAST of Cucsa.349350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDH2_CUCSA	2.7e-35	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G092000 PE=4 SV=1	[more]
A0A0D2TNI7_GOSRA	8.6e-26	88.89	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G125400 PE=4 SV=1	[more]
V4TFF7_9ROSI	3.3e-25	90.48	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033198mg PE=4 SV=1	[more]
A0A067LEX0_JATCU	3.3e-25	79.45	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10753 PE=4 SV=1	[more]
B9RH26_RICCO	4.3e-25	90.48	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1446310 PE=4 SV=1	[more]

BLAST of Cucsa.349350 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27435.1	1.6e-23	69.01	unknown protein	[more]

BLAST of Cucsa.349350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445578\|ref\|XP_004140549.1\|	3.8e-35	100.00	PREDICTED: uncharacterized protein LOC101220585 [Cucumis sativus]	[more]
gi\|659119884\|ref\|XP_008459894.1\|	5.6e-34	97.30	PREDICTED: uncharacterized protein LOC103498876 [Cucumis melo]	[more]
gi\|470149174\|ref\|XP_004310116.1\|	1.5e-26	87.14	PREDICTED: uncharacterized protein LOC101295884 [Fragaria vesca subsp. vesca]	[more]
gi\|1012118472\|ref\|XP_015961722.1\|	5.6e-26	83.10	PREDICTED: uncharacterized protein LOC107485711 [Arachis duranensis]	[more]
gi\|1009167733\|ref\|XP_015902278.1\|	9.5e-26	90.63	PREDICTED: uncharacterized protein LOC107435231 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.349350.1	Cucsa.349350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37703	FAMILY NOT NAMED	coord: 30..109 score: 1.4
None	No IPR available	PANTHER	PTHR37703:SF1	SUBFAMILY NOT NAMED	coord: 30..109 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.349350	Cla001494	Watermelon (97103) v1	cgywmB626
Cucsa.349350	Csa6G092000	Cucumber (Chinese Long) v2	cgycuB490
Cucsa.349350	ClCG06G001860	Watermelon (Charleston Gray)	cgywcgB595
Cucsa.349350	CSPI06G07510	Wild cucumber (PI 183967)	cgycpiB517
Cucsa.349350	CmaCh17G014160	Cucurbita maxima (Rimu)	cgycmaB0951
Cucsa.349350	CmaCh08G000130	Cucurbita maxima (Rimu)	cgycmaB0955
Cucsa.349350	CmoCh08G000130	Cucurbita moschata (Rifu)	cgycmoB0955
Cucsa.349350	CmoCh17G013640	Cucurbita moschata (Rifu)	cgycmoB0951
Cucsa.349350	Lsi09G017550	Bottle gourd (USVL1VR-Ls)	cgylsiB562
Cucsa.349350	Cp4.1LG12g10010	Cucurbita pepo (Zucchini)	cgycpeB0907
Cucsa.349350	MELO3C035240.2	Melon (DHL92) v3.6.1	cgymedB565
Cucsa.349350	CsaV3_6G007910	Cucumber (Chinese Long) v3	cgycucB532
Cucsa.349350	Cla97C06G111170	Watermelon (97103) v2	cgywmbB596
Cucsa.349350	Bhi12G002142	Wax gourd	cgywgoB696
Cucsa.349350	Carg11575	Silver-seed gourd	carcgyB0012
Cucsa.349350	Carg03818	Silver-seed gourd	carcgyB1099

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.349350	Cucurbita pepo (Zucchini)	cgycpeB0911
Cucsa.349350	Cucurbita pepo (Zucchini)	cgycpeB0914
Cucsa.349350	Cucurbita pepo (Zucchini)	cgycpeB0915
Cucsa.349350	Silver-seed gourd	carcgyB0778
Cucsa.349350	Wax gourd	cgywgoB699
Cucsa.349350	Cucumber (Gy14) v1	cgycgyB095
Cucsa.349350	Wild cucumber (PI 183967)	cgycpiB514
Cucsa.349350	Melon (DHL92) v3.5.1	cgymeB564