Bhi12G002142 (gene) Wax gourd

Overview
NameBhi12G002142
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionDNA-directed RNA polymerase subunit beta
Locationchr12 : 75983717 .. 75991055 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGTGCATTTTGGGGGACACGGGTATTGGAGATTGTGAAGAAGCACGATTCCGGAGGTTTAGTCTGGAAGAGAATCAAGCTCACCACAACCCGTAAAGCCAACGCCAAGAAAAGGCTTCTTCGTGTTTGGCAGGTTCTTTCTCAATTTCAATCTCAATATCACTTTTCTATTTATGCCCACCATTAGTGTTTGCTAGAAGAATCTCTGGAGATTTATTTGGAAATAGCAAATACTCGATTGCCCGTTAATATCTTGCTCTGAGTTGGTTTTAGGAGTAGAACTTTGGAGGTTTAGATATAATTGTACGAAGAGTAGAAAAAATGGATGGTGACACTGAATCCTTCAATACAGTCAATATTGAAGCAAATGAAGTAGATTTAGGAGACTCCTTGGCTTGGTTTCATATATGCGTTGGAATGACATTTTCTGTAAGCAGTGTAGAAAATATTGGAAACCATGCGACTGTTCACTAACAGTGAGACCAAGGATATCCATTACGTTTGAGTTATCTATTTGCAATTTTTGTGCAGTATTTTTTCATGTAGACATCAGTTCCCATTGTTTATTTAGGATTTTCGTGCAGTGCTAGGCATTAGTGGGAAAATACAGAGAAATCTCGATCCACATGTGGATGATATCCCAACAATCAGCAATGGGAGAATGGTGAATGTGAGATGGTTCTGATCTTATAAATTCTTTTTTTACAAAGAATATACCAACGTGGAGTCAAAGAACGTTTGGGGTTCTTTTTCTGCAATCTATTTGGAGATTGTAATCCTTCCAATGCTAGGATCCAGAGAATGAATTTTACATTCTGTGTAACTATGTCTTTCTAGATACATTGTATAAGAACCTTGTCAAGAAGATTCTATAATAGTAGCCATAAGAATGAGGTTCAAACATAGAGCTGCGTACAGGATCTTCCATCTTACTAGTATTAGGTTGCTGGTTTGTAGAAAGATCAGAGGGGTTATGGAAAAATGTACTGGTTGTTGTCTCCAAATGTGAGAGGGGCTCTTATAAGCTACGAATGTCAGGCCTCATGATTTTCTAATCACCTGTCTCTGAGGATTGAGATAGTTTTGGAAAACAAACTTCAGGTGGATGGCTTTGAATCCAAGTACCTTTTGGAAAAAAAAAATAGTTTTCTTTACCTATCTTGGAAGAATGTTGATTCTCCATAATCTTTTAGCTTCTAGATAGAGTTTCTTAGTTAAGGAGTTTTGTAATTATTATTCTTTTTGATTCAGGCTATGAGGACCATCTTGTCACCTCCTTGGCTAGAGTGACGTGGAGAACGTGTTATCTTTCCTTGGAGTCTTCCTTTTATTAACATGTTTGTGTTTTGGTGACACATCTTATCTAAAAGAGAAGAATTTTTAATATGAAACATTACCTTTCCAGTTCATATTGGTGATTTCTTTCATTCTAGTTGTAGAACATTTCAAGTTAGATGAACCTTGAATGGAAATCTTCATGGACTAACTCAAAATTAGATAGACACATAGAAAGAAAACCAATCAAGGAATATGTAAAATAACTTTTTTTATATGAATAATATCACAAAAATATGAAAAAATGCATAACCTTGTAAATGTAAGAGAATCTAAGCTCAATGATTTCACGTTGTCTCTTTAAGGCAATTTTACTTACTCTAGTACCTAAGTTTCTTGAGTAATTGTCTCTTAGGATAGATAAGATTACTTTTCTTATGGAAGCATCACCTCGTCCACGAGATCCAACGAACTATACTCTATGGATATACCGAACTTCAACAAATTTTGAAATGAAGAGAATTTTTATTTAAGGAAGAAAAATGCTTATGAAAATCATTTTAAACGTTTTTAAAGAAAGGCCACATTTATAGACTAATTCGTGACCATTCGGATAGTCGTGACCTTTCTTCAAATTAGTTATTTATTGAAAAGATGCATCCCTTAATGAAAGAACACACCTTATGAATTTGAAAGGATACAACCCTTAACGAAGAGTCACATACCATTTATTCCAACAATCCTCCCCATAAATGGTAAGTTGACAAATCAAGATAACAGAAAATGTGTGGTATTTCCCAATGAAGAACCTACATCAGGATAAGTAGTAAAAACGTTGAGCTTTCCTTAGTGAACATCAATCGAGTTTACTTGGTTAATTAGTAGACTTGATGCCTTGAACTGTTAACTGTTCTAAAGTAAATTAAGACAATTGGAGTCACAGTTTCTTATTATAACAAAGTTTGTTCTCATAATTGTGCTCATTTTGGCCTTGAACACCGCTTGGTCTCATGAGTGTCTTAGAGAATTCGCCTTAAAATTCTCATAGAAGCGGCCCCTTTACACTCACATAGGTGATTCCTATAAAGAACATCGTATATGCTCTTTTCATAAAAAATTATTCAACCACTTATAGAAATCATGAAAAGCATAATGCGTACCCTAAAACCATACTTGCACTATCTCATCATCCTTAGAATGGGTAAGAGAAAGAAAAATCCAACACAATGCTTATTAAGTTTTCCAGAGGCCGGTTTGCTCATTGAACCAAGATTTTGGGATCTCCAGTCAACTAGGTTGCATTGCCTCTCTGGTTAACTTTTTTAAATTATAGGCTATAATCCCATTCTCCTTGAACTTTCAACCAATTCTTTACTTAGGCCTTTTATAAGCGGATCTGCAACATTATCTTTTGACCTTATAAAGTCAATTGTGATAATTCACTAGAAAGTGTATTATGTCGAGACTTTTATTATTCATGAAAGGGGTATAGGTTATATTCACACTATAGGAATGTCATCCTTCTCTCAACTATATGCAACCTCTTTTGAAATTGTTTTCCAATGTTCTAAACTTGGATTATCAATTTAGAAATAGTCAATATTATCAGATACCCCCACACTAATACCATTTCCATAACCTACCCACTTAGGTTTTGTGGTATCCTTACAATAGATTTTTATTTGCTTCTTAGCAAGCACTTACAATGGTATCAATATGTTATATTAAATACTTTTCTTTTACTATTTTTGGATATGAAAATTGAAAATCAGAATTACCATCTTCAAATTAGGAATTAAATCCATATCACCCAATGCCAAACTTTAGGAGAATCCACCAATTAAGCAAACTAAACAATATTTACTTTAAAGATAGAGTGCTTGAATATTACATTCTCATACAAACATAAAGCTTATTAAGTTCACAATAATTACTAAATTAAAGACTAGACATTTGCACACTTTAGGTAGATAAATTAACGTCTGCAACTCCATCAGAAAGATTCTCCATTTCGGTTATATGGGCTTGGGCATTTCTTTTCTGAAAGTTTCGTGGCCTACAACAATCCTTCGATTGATGTCCCATTTTATTGCAATTAAAGCACTTGCCATTGAACTTTCTTGTGTATTGTTTCCTTTGATTTGAACTCTCACCATAAAATTTTCTTTTCTTGTTGCTTTGTGTCTCAACAATATTTGTTTTGGGGTTTATGACATTGTCTAGAGAACCTTTTTCTGCAATTTTATTTTTCTCTTCAATTCCAAGCTTATCTCCTTTTGTTATATTTGAGATAGTTTTTGAAATCTCTCATTGAGGGTGGCAATTTTTCAATTATTGTTGCTACCTGAAATGATTCACTTGAAAGAATATTCTCAGCATGTAAGTCATGAAGAATTACTTAGATTTCTTGAACTTGACTTATTACTATTTTTGAATCCACCATTTTATAATCTAAAAACTTGCCAACTATGAATTTCTTCAAACTAGCAACTTCTATTTTCTACTTTTTCTTTAGGGAAGTCCAAAGATTCTTTGCCGAATGAACACTATTATACACATAGATAATCAGCATGCTTCCGTGCATCATATGCAAGTTGTCTTTCTTTGTGAGTTTCTCCCTTAGATAAAACAGGAGCATCCTCTTTGAGAAATTTTGCCAAATTCAAAGTGGTGGAGATAAAACATCTTTTGTTGCCAACATTTGAAATCAATACCACCAAACTTTTCAGGCTTCTCCCCATGGACAACCCCAGCAACTGGAACAGAATTAAGATTATTTGAAGAAATAAATTACTAAACACTTCAACAAATAAAAAAAAAAAATTGATAAAAATTATCAAATAGATCTTGCTGTAACGTACAAATCAATATAAATAAACACGATATAACATAATATGAATAGAGTCCAATTCTGAGTAAAACAGGATCGTGACGGTGGAGGTATGCCTTAGATCATTTTTTATTCTCTTGGATGTGACATAAATTGGGCCCTTACATCTTTCAAATTTGTGAATATATAGGCAAATCACCTTTTTATGGAGTTTTGAAAACTCGACTTCTCCCTTCAAAGGATGGCCAGGCCATGGCTTGATTAGCAAACTTATAAAAAGGAAGTCTCTGATAGAAAAACAGAATTAGGAAACTCTTGACAACATTTTCTTAAAAATGCCAGCAATCTTGTTGATCTTAATGCTCTTGATGAGTAAGAAGACTTTTCCCATCTTGACACATCCTAAAAGGCCTTTAGAAGCACCATTTAATTCAAACTCCAAAACCTTAGGTTGAAGGAAGAAGATACGTTTAACTGTTAGCAAGGGGGGTAGAGCTCAAAAATTTAAGTTTACACACCAAAGCTCTGTTGGCTAAATAGCTTTGGTGCTTTTCCCTTGAGCTTGAATCTTTATGACATAGGATTGTTGCTTGTAAGTATGGCCTCCATCCCTTTGATGTCCAAAGGGGATAAAGGTAAACACCGAAATCTTTGGAAAAATATTTCTCTTGAGCTCCCTTTCTTCTCCCTTCTTGTTCGTTGCGTTGTGGAGGAAGGTAAAAAGATGTATTTTTGGGAAGATTAGTGGGTGGAGGATAGACTCCTTTGCTTTGCATTTCCTCACTTATATCATTTGTCTTAAAATCACCCGGTTTTTTATTTCTTGGTTTGGTTGGGGAGCTCAATGTCTTTCTCTTTTGGTTTCCATTGATCGTTGTACGATAGAGAAACGATGGAAGTAGCCTCTATTTTGTCTTTGATGATGAGTTCAATTTAGGCTTGAAGAAAGGTTGTTCATGTTTGGAATCCTAATTCTATTGAGGTTTTTTCTTTTTGATCCTTATGGCTATTGTTGGATCCCTCTCCTGCTAGTGAGTCAGTCTTTGATGTGATCTAGAGGATTAATATCCCTTAAAAAGTTAGGTTCTTTATCTTGCAAGTTGATTTTGAGTTAGCTCATTAGAGAGATGTCCGTGCGACGATTGAGGAGCTCCTCCTCCACCCGCCTTTCTGAGAGAAAGGTTGCTTCTTATGGTCTGTTGGGGTGTTTGCTTTATTGGTCGATATTTAGGAGGAGAGAAGCAACAATATTTAGAGGTGTGGAGAGGGACCCTTGTGATGTTTGATTCTTAGTGAGGTTCTATGTTTCTCTTTGGGCTTCGGTTTCAAAAATTATTTTTTTCGTAATTATGTCCTTGTAGTCTTTATTCTTTCTCAATGAAAGCCATTGTTTCAATATATATATAAGGGCATTACTAGGAGACTGCCTCCCTCTTCTATCCTCAGTTTTGGTTGAGCATCCGTTTAAATGTGAAAAAATTTTCTCTGGAGCAACTATGTTATTAATGCTTTCTTTTGGGCCATGTGGGGTGACCGCAACACACAATTTACAAGATAAAGAAAGATGCTACATTAGTTTATTTATGTATTTTTATTAGTCTTTATGGCTATGACTTGCTGTGTTAATTACCCTTATTTCCAAAATTATGCTCTCTTTTCTCCCATACCATTAGAAATGTTTTTAAGTAATTCTTAGGGTGGGAGTATTTGCCTTCTGTATTTACTTTCACACCATTTACAAAATTATAGTAGTCTCAAAAGAAAAAAAAAAAAAGAGCTAGAAATTCGTTGCTCCTTTTGGAAGTACCGAGGCTCTTGTAGTTAAGTTGGAAAGCTGCAAGATGTTTTCTTCCATAACGCTTCTTTCGTGATTGGCAACAACAATAGAATCACATTTCGGGAATGCCTGCCCTTTTAAATTTTCTGCCCTCCCTGGACATTACCTTCTCTCTGATAACAACAATTGCATCATTAGCCCACACGTGGAGCACCTTCCACGAGGGATAGAACCTCAATCTTAGAAGAAATCTGGATGTCATAGCAGGATGAATGGATCTCTCTCACCAACATCGTTAGAGAAATATCTCAATGGCGTGTTTTCTTCACTGGCTCCTATGCTTCAAATTTCTGTGTTCAGCACTTCAAAGTGGGCCAGTCTTCTAAATGAATCCAATTTCCAAACAACCTTTCTTTTATCTTTTGAGGTTCTTCCCTTTAAAACGGAATGGTAGAATTTTCTTTGAGCAAGAAAAATCTTTAATTCTTAAATGTTTGAATTTTTTGGAAAAATCTTATTTTTGTTGTTGCCACTTTGTGTAGCTTCCCTAGAATCATCTCTCCCCTCTCTTTGTGTGTGTAAATTTCATTTAATCATTGAAATTGTCTCTTATAAAAGAAAAGGAAAAAGAAAAAAGAAAACGATAGAAAAAAAATGCTTTCCTGCTTTTGATGAATGGATTTCAAAGTTTGCAAGCTGTTTTCTTTACTTTTTTTTTTCTTTGAAAGTGGAATGGCGTGAAATAAATTTTTTGAGGGTCAGCATAGATATTTACCATTTAGCTGTTAGAGTTTTATGATTTACATCAAAGTAAGTAAAGGATAAGCTATACTATTCTACGAGTTTTGGCATAGTGACTACAAGGTTCAAGTAATTACTTTTTATTTAATCGATTGATCCTGTTAAGAATGTCGATTTTATTTGCTAAAAAGGAAATTATGTTAAGTCTTGTGTAGTCATCATGTGTGGATTCTCGCCTTCTAATAATATCGTGGAGGTATTTGTTTAGTTTTATTTATGGTGAAAGTGACGGCTTTTTGACTGTTTATTGTTCAGGAACTGAGTACAATTTTAATCTTAGTTGACTTGTATAAATTATGCTTCTCAAATACATCCATCTGAAGATTGTTCATTCTAGAGCCATTGCATTTTCTACCCGAAATTTTCTATTTTTTTATACGTCTGTATTTGTCCTATGGAATGTACATGCTATGCCCTTATGGTAACAGTTGTTACCGTGGAATTCTATTTTGAATTTCTGTTCTGTTCTTGTCCTTGTTTTATATAATGTTACATTACTAATTCGAGAAGCATTTATTAAATTGTTGATCTGTGCTCTAAATTCATATTATTACTTCTTTCCAGAATGAGGCTGTTCTGAAGGCATGTTCTGAGCCACCTCCGCCTAAATCCTCGGGAGACAAAATTAGTCAAGTTGGAATAAATGAGTAA

mRNA sequence

ATGGCGGGTGCATTTTGGGGGACACGGGTATTGGAGATTGTGAAGAAGCACGATTCCGGAGGTTTAGTCTGGAAGAGAATCAAGCTCACCACAACCCGTAAAGCCAACGCCAAGAAAAGGCTTCTTCGTGTTTGGCAGAATGAGGCTGTTCTGAAGGCATGTTCTGAGCCACCTCCGCCTAAATCCTCGGGAGACAAAATTAGTCAAGTTGGAATAAATGAGTAA

Coding sequence (CDS)

ATGGCGGGTGCATTTTGGGGGACACGGGTATTGGAGATTGTGAAGAAGCACGATTCCGGAGGTTTAGTCTGGAAGAGAATCAAGCTCACCACAACCCGTAAAGCCAACGCCAAGAAAAGGCTTCTTCGTGTTTGGCAGAATGAGGCTGTTCTGAAGGCATGTTCTGAGCCACCTCCGCCTAAATCCTCGGGAGACAAAATTAGTCAAGTTGGAATAAATGAGTAA

Protein sequence

MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPPKSSGDKISQVGINE
Homology
[Close]
BLAST of Bhi12G002142 vs. TAIR10
Match: AT1G27435.1 (unknown protein)

HSP 1 Score: 105.5 bits (262), Expect = 1.4e-23
Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 0 

Query: 3  GAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSE---PPP 62
          GAFWGTRV+E+VKKHDSGGL+WKRIKLT TRKANAK RL RVWQNEAVL+AC E   P P
Sbjct: 6  GAFWGTRVMELVKKHDSGGLLWKRIKLTPTRKANAKTRLRRVWQNEAVLRACGESDAPNP 65

Query: 63 PKSSGDKIS 69
          P +S  K S
Sbjct: 66 PGASNTKSS 74

[Close]
BLAST of Bhi12G002142 vs. TrEMBL
Match: tr|A0A1S3CB86|A0A1S3CB86_CUCME (uncharacterized protein LOC103498876 OS=Cucumis melo OX=3656 GN=LOC103498876 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-31
Identity = 70/74 (94.59%), Postives = 70/74 (94.59%), Query Frame = 0 

Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRL RVWQNEAVLKACSEPPPP
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 60

Query: 61 KSSGDKISQVGINE 75
          KSSGDKI QV  NE
Sbjct: 61 KSSGDKIGQVEKNE 74

[Close]
BLAST of Bhi12G002142 vs. TrEMBL
Match: tr|A0A0A0KDH2|A0A0A0KDH2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G092000 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.2e-31
Identity = 70/74 (94.59%), Postives = 70/74 (94.59%), Query Frame = 0 

Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRL RVWQNEAVLKACSEPPPP
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 60

Query: 61 KSSGDKISQVGINE 75
          KSSGD ISQV  NE
Sbjct: 61 KSSGDNISQVEKNE 74

[Close]
BLAST of Bhi12G002142 vs. TrEMBL
Match: tr|A0A2P6R059|A0A2P6R059_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0429451 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 6.7e-28
Identity = 63/70 (90.00%), Postives = 66/70 (94.29%), Query Frame = 0 

Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRV+EIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKAC+EPPP 
Sbjct: 1  MAGAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACAEPPPS 60

Query: 61 KSSGDKISQV 71
          KSSG   S+V
Sbjct: 61 KSSGADASEV 70

[Close]
BLAST of Bhi12G002142 vs. TrEMBL
Match: tr|A0A2P5F206|A0A2P5F206_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_124310 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.2e-26
Identity = 59/64 (92.19%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRV+EIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSE PP 
Sbjct: 1  MAGAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEQPPS 60

Query: 61 KSSG 65
          K++G
Sbjct: 61 KTAG 64

[Close]
BLAST of Bhi12G002142 vs. TrEMBL
Match: tr|A0A2P5BSU9|A0A2P5BSU9_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_213000 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.2e-26
Identity = 59/64 (92.19%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRV+EIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSE PP 
Sbjct: 1  MAGAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEQPPS 60

Query: 61 KSSG 65
          K++G
Sbjct: 61 KTAG 64

[Close]
BLAST of Bhi12G002142 vs. NCBI nr
Match: XP_008459894.1 (PREDICTED: uncharacterized protein LOC103498876 [Cucumis melo])

HSP 1 Score: 143.7 bits (361), Expect = 2.6e-31
Identity = 70/74 (94.59%), Postives = 70/74 (94.59%), Query Frame = 0 

Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRL RVWQNEAVLKACSEPPPP
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 60

Query: 61 KSSGDKISQVGINE 75
          KSSGDKI QV  NE
Sbjct: 61 KSSGDKIGQVEKNE 74

[Close]
BLAST of Bhi12G002142 vs. NCBI nr
Match: XP_004140549.1 (PREDICTED: uncharacterized protein LOC101220585 [Cucumis sativus] >KGN46427.1 hypothetical protein Csa_6G092000 [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 3.3e-31
Identity = 70/74 (94.59%), Postives = 70/74 (94.59%), Query Frame = 0 

Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRL RVWQNEAVLKACSEPPPP
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 60

Query: 61 KSSGDKISQVGINE 75
          KSSGD ISQV  NE
Sbjct: 61 KSSGDNISQVEKNE 74

[Close]
BLAST of Bhi12G002142 vs. NCBI nr
Match: XP_022960352.1 (uncharacterized protein LOC111461104 [Cucurbita moschata])

HSP 1 Score: 142.5 bits (358), Expect = 5.7e-31
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60

Query: 61 KSSGDKISQV 71
          KSSGD ISQV
Sbjct: 61 KSSGDGISQV 70

[Close]
BLAST of Bhi12G002142 vs. NCBI nr
Match: XP_023515314.1 (uncharacterized protein LOC111779382 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.4 bits (350), Expect = 4.8e-30
Identity = 68/70 (97.14%), Postives = 68/70 (97.14%), Query Frame = 0 

Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPP 
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPT 60

Query: 61 KSSGDKISQV 71
          KSSGD ISQV
Sbjct: 61 KSSGDGISQV 70

[Close]
BLAST of Bhi12G002142 vs. NCBI nr
Match: XP_023004315.1 (uncharacterized protein LOC111497673 [Cucurbita maxima])

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29
Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0 

Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60

Query: 61 KSSGDKISQV 71
          KSS D I+QV
Sbjct: 61 KSSRDGINQV 70

The following BLAST results are available for this feature:
BLAST of Bhi12G002142 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi12G002142 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G27435.11.4e-2375.36unknown protein[more]
BLAST of Bhi12G002142 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CB86|A0A1S3CB86_CUCME1.7e-3194.59uncharacterized protein LOC103498876 OS=Cucumis melo OX=3656 GN=LOC103498876 PE=... [more]
tr|A0A0A0KDH2|A0A0A0KDH2_CUCSA2.2e-3194.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G092000 PE=4 SV=1[more]
tr|A0A2P6R059|A0A2P6R059_ROSCH6.7e-2890.00Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0429451 PE=4... [more]
tr|A0A2P5F206|A0A2P5F206_9ROSA6.2e-2692.19Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_124310 PE=4 S... [more]
tr|A0A2P5BSU9|A0A2P5BSU9_PARAD6.2e-2692.19Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_213000 PE... [more]
BLAST of Bhi12G002142 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008459894.12.6e-3194.59PREDICTED: uncharacterized protein LOC103498876 [Cucumis melo][more]
XP_004140549.13.3e-3194.59PREDICTED: uncharacterized protein LOC101220585 [Cucumis sativus] >KGN46427.1 hy... [more]
XP_022960352.15.7e-3198.57uncharacterized protein LOC111461104 [Cucurbita moschata][more]
XP_023515314.14.8e-3097.14uncharacterized protein LOC111779382 [Cucurbita pepo subsp. pepo][more]
XP_023004315.11.1e-2995.71uncharacterized protein LOC111497673 [Cucurbita maxima][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0032774 RNA biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003899 DNA-directed RNA polymerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M002142Bhi12M002142mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..74
NoneNo IPR availablePANTHERPTHR37703FAMILY NOT NAMEDcoord: 1..65

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi12G002142Csa6G092000Cucumber (Chinese Long) v2cuwgoB533
Bhi12G002142ClCG06G001860Watermelon (Charleston Gray)wcgwgoB491
Bhi12G002142CSPI06G07510Wild cucumber (PI 183967)cpiwgoB537
Bhi12G002142Cucsa.349350Cucumber (Gy14) v1cgywgoB696
Bhi12G002142CmaCh08G000130Cucurbita maxima (Rimu)cmawgoB1096
Bhi12G002142CmaCh17G014160Cucurbita maxima (Rimu)cmawgoB0456
Bhi12G002142CmoCh17G013640Cucurbita moschata (Rifu)cmowgoB0456
Bhi12G002142CmoCh08G000130Cucurbita moschata (Rifu)cmowgoB1091
Bhi12G002142Lsi09G017550Bottle gourd (USVL1VR-Ls)lsiwgoB021
Bhi12G002142Cp4.1LG12g10010Cucurbita pepo (Zucchini)cpewgoB0175
Bhi12G002142CsGy6G007540Cucumber (Gy14) v2cgybwgoB509
Bhi12G002142MELO3C035240.2Melon (DHL92) v3.6.1medwgoB100
Bhi12G002142Carg03818Silver-seed gourdcarwgoB1141
Bhi12G002142Carg11575Silver-seed gourdcarwgoB0013
Bhi12G002142CsaV3_6G007910Cucumber (Chinese Long) v3cucwgoB549
Bhi12G002142Cla001494Watermelon (97103) v1wgowmB092
Bhi12G002142Cla97C06G111170Watermelon (97103) v2wgowmbB086
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi12G002142Silver-seed gourdcarwgoB0813
Bhi12G002142Silver-seed gourdcarwgoB1173
Bhi12G002142Wax gourdwgowgoB037
Bhi12G002142Cucurbita maxima (Rimu)cmawgoB0237
Bhi12G002142Cucurbita moschata (Rifu)cmowgoB0230
Bhi12G002142Cucurbita pepo (Zucchini)cpewgoB0389
Bhi12G002142Cucurbita pepo (Zucchini)cpewgoB0624
Bhi12G002142Cucurbita pepo (Zucchini)cpewgoB0763
Bhi12G002142Cucurbita pepo (Zucchini)cpewgoB1099
Bhi12G002142Wild cucumber (PI 183967)cpiwgoB001
Bhi12G002142Cucumber (Chinese Long) v3cucwgoB001
Bhi12G002142Bottle gourd (USVL1VR-Ls)lsiwgoB206
Bhi12G002142Melon (DHL92) v3.6.1medwgoB150
Bhi12G002142Melon (DHL92) v3.5.1mewgoB099
Bhi12G002142Watermelon (97103) v2wgowmbB071