Cp4.1LG12g10010 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g10010
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	BnaC03g57680D protein
Location	Cp4.1LG12 : 9796461 .. 9801176 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGCTTTTTAGTGTATAATTTGATTTAGTAATTGAGGAGAGTAATTTAACCTATTAACGTTACTGTTTGGGTTCGCGGGGTTGAGTGAGAGCGCCATAAAACCGAAGCTTTTGGGGGGAATTTGGGCATACAGCTGGGCCACGCTCGGAATCGAGAAACCGGGAGGGGAAGGAAGATGGCGGGTGCATTTTGGGGGACTCGGGTATTGGAGATTGTGAAGAAGCACGATTCTGGAGGTTTAGTCTGGAAGAGAATTAAGCTCACCACAACGCGTAAGGCCAACGCCAAAAAAAGGCTTCTTCGTGTTTGGCAGGTTTTCTCTCAATTTCAATCTCAATATCACTTCGCTGTTTATGTTCGCCATTAGGGTCTCTGGAGAGTTCTGTCAATACTCGATTGTCCGTCAATATCTTGCTCTGGGTCGGTTTTAGGAGTAGAACTTCAGGGGTTTAGATATAACTGGACGATGACATCGAATCATTAATCCCCTTAATGTCGGAGCATCGCTTTGATTTTATATACGCATTGGACTGACATTTCTGAAAGCAATGTTGAAAACATTGGATACCATGTTAAACATTCGTAATAGTTAACAGTGAAGACCAAATGTGAGAGGGGCTCTTCTAAACTAAAAATGTTAGGCCTCACGATTTTCTAACCACCTGTCTCTAATTAGAATTTTTTAGAGCTTTTGCCAATAGAGATAGTTTGGTAAAACAACCTTCAGGTGGATGGTTCCGAATCAGAATACCATTTGTAAAAAAAAAAAAAAGTCTTCTTTACCTACTTGGAAGAAAATAGATTCTCCATAACCTTTTAGCTTCTAGATGGAGTTTCTTAGTTAAAGAGTTTGTAATTGTGATTCATTTCGATTCATGCTATGGGGATCCATTTTGTAACCTTCTTGGCTAGATTTCTTGGCTCCATGACTGTAGAGGTTTGCCTTAGATCATTTTCTGATTCTCATTTGGTGTTAATTAAAATGGGCCCTTACATCTTTCAATTTTGTGTAAATGTGGCTTAAGCATATCGCCTTTTTATGGAATCTTGAAAATTGGCTTCTCCCTTCGAAGGCTGGCCAGGTCATGGTTTGATTGACAAATCTTAAAAAATAAAGTCTTTGCTGGAAAGACGGAATTAGGAAACTCTTGACAACATTTTCTCAAAAATGCCAACAATCTTGTTGATCTGAAAGCCCTTGATGAGTTGGAAGATGTTGCCCCTCTTGACACATCTTGAAAGGCCTTTAGAAGCAATTCAAACTCCAAAACCTTGTTGATGGAAGAAGGTAATTTTGGATTCAATTGTGCAAATCTCTCACATTGGAGGGAGGAGATGAAGTTTCCAACCAACAAATAATAATTGACAGCAAGAGGAAGAAAGTTTTTCTTTGAAATCCTCAGTCTGGATGGCGCAGCCTTATCAAGCACCTTTAAATGAAAAAATAATTTCTTCTTTCATTCATAGACTGAATTATGAAAAAGGGGATCAGATTTCTAGCTTCTAACTTGGAATGAAACCAACTTCCATCGCTCAAAGCTCACCCCTAAATGCTGATTTCAAAGGAGGAAAATTTTCTTTCTATTTATGGCTTGGAGTCTTGATGGATTTATTGTTGAGTTCTTCAAAAACGTCTTAGAAACACCCGAAGGTGTACTAAATATATATCTTCCCCCCTGATAATATCATTCACAAGTCCTTGAAGGAAGCTTATACGAATCCTATCCCTAAGGAAATCATATGTAAGAATAGTAAGAGACTTTTGGCCCATTAGCCTTATCTCTTGCCTCCTTAAGTTTATAGTTGGTCGGCTTAAAGTGGAATGTCTATTCGGTGAAATAAAAATTTTGAGGGTCAGCATAGATATTCACTATTTAGCTGTTAGAATTGCATCAGAAAGGATAATCTATACTATTCTATAAGTCTTGGCAAAGTGACTAAAAGGTTCAAGTAATTACTTTTTACTTAATCGAATTATCTTGTTGTGACTGTCAAATTTATATGCTAAAAAGGACATTATGTCAAGTCTTGATTACTCTTCATGAGTGGATTTTCTCTTTCTAACAATATGTGGAGGTATTTGTTTAGTCTTATGTATGGTGAAAATTGCGGCTTTTGACTGTTTATTGTTCAGGAGCGAATACAATTTTATTTTTAGTTGACTTGTATAAATTATGCTTCTCAAATGCATGCATCTGAAGGTGGTTCATTCTCGAACCAAGCCAAATTTTCTATTTTTTTCCACCTCTGTATTTTTACTTTGGAGATGTACATGATTGGCCTTTTGGTCGTTACCATGGAATTCTACTTCGAATTTCTGTTCTGCTCTTGTTCTTGTTTTATATATTGTTATTTTATAAAATGAAACACTACCAATTCTAGATTCATCGTTTAAATTTTTTGATGTAACTAAATTCATATCTTTCCTTCTTTCCAGAATGAGGCTGTTCTGAAGGCATGTTCTGAGCCACCTCCGCCTAAATCTTCAGGAGATAAAATTAGCCAAGTTGGAAAAAATGAGTAAGAACTCTGTAGGATCCAAAAGAGTTTGGCAACTTCGGCATTGCAGTGCCAATCTTTTTCCCCTTATCTGGACCTTTTAGCAAGGAAGAGTAAACATTAAGTAGATACGAGTGATCTCAAAAGTTGTAATCCTCGCATGTAAGCGAAGATAACACACTAGTGTGGAATTATTGCCTGGAGTTTCTCACCATTTTTGTCTGTTTTTGTCATTTGATTTAATGCGATTAGTTTTTCATGGTCCTGACTGCCTCATGAATGACTCGTCTTTCAGTAAAAATATTTGATATTTAGCTTTCTGAGCAAATTCACCATTGAAATTGGAAGTTTCGGGCTGAAAATGTCTGAATTGGAAAAGAAAGACGAGCCTTCAAGAAAAATGTTCATCCTTTCTAGTGTTCGTGTAGTATATTTCTAACTAGTCACAACCTTTAAAAACATGAGATGGGTTTTGTATGATGGAGTAGAATGAGCCTTCTAGGTGGGTGGATGGAAGATGGAATTATGTGAACTTCTATTGAAATACGTACTCCTTTATGTTTGATTGGCAGAAAATATGAATATGATATGCAAATTCTTATTGAGGTAAATAGGTTAGGAGAAAACAGCTCTAGTTACTGTATCTATTGGACTGATATGGACTCTGCATACAGTTCTAATTTGTTTCGAAGTTGTTTAGGGACTTTTTCCTTGATGGTTATTCTGTTTGATTTCAGACCTCAATATGATGATACTTCACCTGTTGCTGAGGTAAATGCAGCTAAAAGAAATTTCAGGATAAACTTGTTTGTACAGTTCGGTACTTGAAAGGTTAACTTGTATTATACGGCAAGTGGTACTCCGCATCTAAATGGTAGATAGGGTCTGTGGATAGGGTTGCCCTCCATCATGGAGATTGGAGATATCTTTCCTCATCTACTTGTATATCAGGCTGAACCATCTAAACTCCCCAAGTGTCTTGAAGATGGTTTGTTTTGCAGGAAGTGTTTTGATTGTAACCGCTGGGCATGAAATGTGGCCAATTACAGGTACTACCTTTCTGCCCAGTTTTCATTTAATTTGAATATTGCATTCGTTGCAAGTGTTTCCATTAAAAGTTGGAAATGCGTGTCTCAGAATGTCAGGCATTTACTAACCATTGAACTGGAGAAGAGTATGAGTAGGTTGATTAAACATTGATGTGAAAGGGGAGGCTGATTGTTCCTCACTTGCTTACAGTTAGTGGACCCCACCAACCAGAAGTTTGTGGGATGATGGATGGGATTAAGATGATTTTTAGCTTTGATTTTGGTGAGAGATTGAAGGGGGAGAAGAAGTATAAAAAGAAAGATAGATAGATGTCTTTGTTGCAGGGATGCAAAGCAACCTCTCTTATTTAATGTTCGTCCAAAACAAACAGCTTATAAGAGTGGTTGGGTGAAGAACTGGTCAACTTGCATAATTCATCACAATTCCTTCTGCGATGGATGGGTAATTTAGTTGTGTTCAAAATTTCTAAATTGGCCTTGCTTGATGGAGACCACCCCCCCTTTGTTATTGCCTTTTCATATGTTTCTAGGATTGGTAGGATTTTTTCTTTAAATGTTATTGATCTTATCAGGTTGGCCTACATAAGAAAATTTTAAAAAAATAAAAAAAATAAAAAGTTATAGCTGTAAGTTTTGTGGTCTACCATGACGTGCTGTCCACGTGATTGACAAATGAGAAACCCGAAGTCAGCAATCCACAATCCAATCCAATTCNAATTGGTTCACATAAAGGTGACGTGATGAACTTCAACAGCCTTTGCTGATTCTAACCTTCCATCACAAGAAATTCCAAGGCCACCATTTTCTTTATTTATTTAAATACTGCCTATTTATATTGACTATGCCTCTTTTTTAAAAGAAATTAAAAACCCTTTCTTGTTTAGAATGATTTCTATGAATCATTCCTTCCCCTTTTTAACTCGTTTTATTGGAGGTGTTAATGTCTAATTAATATATAAATGAAATCAAACTCATAGATTTTTACTATATTTGATTCTTTCATATCTTTTGATGTAACATAAAATTATATGGTGTAGGTTTTCTTTGAAGCGGTTGTGTATGAACTCAAAGTATTTGATTTTGTGTAGCTTGAAATTATTGGATGTATTGGTTTATGTTTTGATTGTATATATGTACGTTAAAATTGTAGGTTTGTGATTTTGTGAT

mRNA sequence

AAAGCTTTTTAGTGTATAATTTGATTTAGTAATTGAGGAGAGTAATTTAACCTATTAACGTTACTGTTTGGGTTCGCGGGGTTGAGTGAGAGCGCCATAAAACCGAAGCTTTTGGGGGGAATTTGGGCATACAGCTGGGCCACGCTCGGAATCGAGAAACCGGGAGGGGAAGGAAGATGGCGGGTGCATTTTGGGGGACTCGGGTATTGGAGATTGTGAAGAAGCACGATTCTGGAGGTTTAGTCTGGAAGAGAATTAAGCTCACCACAACGCGTAAGGCCAACGCCAAAAAAAGGCTTCTTCGTGTTTGGCAGAATGAGGCTGTTCTGAAGGCATGTTCTGAGCCACCTCCGCCTAAATCTTCAGGAGATAAAATTAGCCAAGTTGGAAAAAATGAACCTCAATATGATGATACTTCACCTGTTGCTGAGGCTGAACCATCTAAACTCCCCAAGTGTCTTGAAGATGGAAGTGTTTTGATTGTAACCGCTGGGCATGAAATGTGGCCAATTACAGTTAGTGGACCCCACCAACCAGAAGTTTGTGGGATGATGGATGGGATTAAGATGATTTTTAGCTTTGATTTTGGTGAGAGATTGAAGGGGGAGAAGAAGTATAAAAAGAAAGATAGATAGATGTCTTTGTTGCAGGGATGCAAAGCAACCTCTCTTATTTAATGTTCGTCCAAAACAAACAGCTTATAAGAGTGGTTGGGTGAAGAACTGGTCAACTTGCATAATTCATCACAATTCCTTCTGCGATGGATGGGTAATTTAGTTGTGTTCAAAATTTCTAAATTGGCCTTGCTTGATGGAGACCACCCCCCCTTTGTTATTGCCTTTTCATATGTTTCTAGGATTGGTAGGATTTTTTCTTTAAATGTTATTGATCTTATCAGGTTGGCCTACATAAGAAAATTTTAAAAAAATAAAAAAAATAAAAAGTTATAGCTGTAAGTTTTGTGGTCTACCATGACGTGCTGTCCACGTGATTGACAAATGAGAAACCCGAAGTCAGCAATCCACAATCCAATCCAATTCNAATTGGTTCACATAAAGGTGACGTGATGAACTTCAACAGCCTTTGCTGATTCTAACCTTCCATCACAAGAAATTCCAAGGCCACCATTTTCTTTATTTATTTAAATACTGCCTATTTATATTGACTATGCCTCTTTTTTAAAAGAAATTAAAAACCCTTTCTTGTTTAGAATGATTTCTATGAATCATTCCTTCCCCTTTTTAACTCGTTTTATTGGAGGTGTTAATGTCTAATTAATATATAAATGAAATCAAACTCATAGATTTTTACTATATTTGATTCTTTCATATCTTTTGATGTAACATAAAATTATATGGTGTAGGTTTTCTTTGAAGCGGTTGTGTATGAACTCAAAGTATTTGATTTTGTGTAGCTTGAAATTATTGGATGTATTGGTTTATGTTTTGATTGTATATATGTACGTTAAAATTGTAGGTTTGTGATTTTGTGAT

Coding sequence (CDS)

ATGGCGGGTGCATTTTGGGGGACTCGGGTATTGGAGATTGTGAAGAAGCACGATTCTGGAGGTTTAGTCTGGAAGAGAATTAAGCTCACCACAACGCGTAAGGCCAACGCCAAAAAAAGGCTTCTTCGTGTTTGGCAGAATGAGGCTGTTCTGAAGGCATGTTCTGAGCCACCTCCGCCTAAATCTTCAGGAGATAAAATTAGCCAAGTTGGAAAAAATGAACCTCAATATGATGATACTTCACCTGTTGCTGAGGCTGAACCATCTAAACTCCCCAAGTGTCTTGAAGATGGAAGTGTTTTGATTGTAACCGCTGGGCATGAAATGTGGCCAATTACAGTTAGTGGACCCCACCAACCAGAAGTTTGTGGGATGATGGATGGGATTAAGATGATTTTTAGCTTTGATTTTGGTGAGAGATTGAAGGGGGAGAAGAAGTATAAAAAGAAAGATAGATAG

Protein sequence

MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPPKSSGDKISQVGKNEPQYDDTSPVAEAEPSKLPKCLEDGSVLIVTAGHEMWPITVSGPHQPEVCGMMDGIKMIFSFDFGERLKGEKKYKKKDR

Homology

[Close]

BLAST of Cp4.1LG12g10010 vs. TrEMBL
Match: A0A0A0KDH2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G092000 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 8.5e-32
Identity = 71/74 (95.95%), Postives = 71/74 (95.95%), Query Frame = 1


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRL RVWQNEAVLKACSEPPPP
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 60

Query: 61 KSSGDKISQVGKNE 75
          KSSGD ISQV KNE
Sbjct: 61 KSSGDNISQVEKNE 74

[Close]

BLAST of Cp4.1LG12g10010 vs. TrEMBL
Match: V4TFF7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033198mg PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.0e-25
Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 1


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          M GAFWGTRV+EIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVL+ACSEPPP 
Sbjct: 3  MGGAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLRACSEPPPS 62

Query: 61 KSS 64
          K+S
Sbjct: 63 KTS 65

[Close]

BLAST of Cp4.1LG12g10010 vs. TrEMBL
Match: B9RH26_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1446310 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.6e-25
Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 1


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          M GAFWGTRV+EIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKAC+EPPP 
Sbjct: 1  MLGAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACAEPPPS 60

Query: 61 KSS 64
          K+S
Sbjct: 61 KTS 63

[Close]

BLAST of Cp4.1LG12g10010 vs. TrEMBL
Match: M5XTZ7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014228mg PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.9e-25
Identity = 60/74 (81.08%), Postives = 65/74 (87.84%), Query Frame = 1


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVL+AC+E P  
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLRACAETPTS 60

Query: 61 KSSGDKISQVGKNE 75
          +SSG   S V + +
Sbjct: 61 QSSGAAASGVSEKD 74

[Close]

BLAST of Cp4.1LG12g10010 vs. TrEMBL
Match: W9QWB3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017495 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-24
Identity = 57/65 (87.69%), Postives = 62/65 (95.38%), Query Frame = 1


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRV+EIVKKHDSGGLVWKRIKLT+TRKANAKKRLLRVWQNEAVLKACSE PP 
Sbjct: 1  MAGAFWGTRVMEIVKKHDSGGLVWKRIKLTSTRKANAKKRLLRVWQNEAVLKACSEQPPS 60

Query: 61 KSSGD 66
          K++ +
Sbjct: 61 KTAAE 65

[Close]

BLAST of Cp4.1LG12g10010 vs. TAIR10
Match: AT1G27435.1 (AT1G27435.1 unknown protein)

HSP 1 Score: 104.8 bits (260), Expect = 4.9e-23
Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 1


Query: 3  GAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSE---PPP 62
          GAFWGTRV+E+VKKHDSGGL+WKRIKLT TRKANAK RL RVWQNEAVL+AC E   P P
Sbjct: 6  GAFWGTRVMELVKKHDSGGLLWKRIKLTPTRKANAKTRLRRVWQNEAVLRACGESDAPNP 65

Query: 63 PKSSGDKIS 69
          P +S  K S
Sbjct: 66 PGASNTKSS 74

[Close]

BLAST of Cp4.1LG12g10010 vs. NCBI nr
Match: gi|659119884|ref|XP_008459894.1| (PREDICTED: uncharacterized protein LOC103498876 [Cucumis melo])

HSP 1 Score: 145.2 bits (365), Expect = 9.3e-32
Identity = 71/74 (95.95%), Postives = 71/74 (95.95%), Query Frame = 1


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRL RVWQNEAVLKACSEPPPP
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 60

Query: 61 KSSGDKISQVGKNE 75
          KSSGDKI QV KNE
Sbjct: 61 KSSGDKIGQVEKNE 74

[Close]

BLAST of Cp4.1LG12g10010 vs. NCBI nr
Match: gi|449445578|ref|XP_004140549.1| (PREDICTED: uncharacterized protein LOC101220585 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-31
Identity = 71/74 (95.95%), Postives = 71/74 (95.95%), Query Frame = 1


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRL RVWQNEAVLKACSEPPPP
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPP 60

Query: 61 KSSGDKISQVGKNE 75
          KSSGD ISQV KNE
Sbjct: 61 KSSGDNISQVEKNE 74

[Close]

BLAST of Cp4.1LG12g10010 vs. NCBI nr
Match: gi|470149174|ref|XP_004310116.1| (PREDICTED: uncharacterized protein LOC101295884 [Fragaria vesca subsp. vesca])

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-26
Identity = 62/70 (88.57%), Postives = 65/70 (92.86%), Query Frame = 1


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVL+AC+EPPP 
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLRACAEPPPS 60

Query: 61 KSSGDKISQV 71
          KS G   S+V
Sbjct: 61 KSPGLDASEV 70

[Close]

BLAST of Cp4.1LG12g10010 vs. NCBI nr
Match: gi|1009167733|ref|XP_015902278.1| (PREDICTED: uncharacterized protein LOC107435231 [Ziziphus jujuba])

HSP 1 Score: 125.9 bits (315), Expect = 5.8e-26
Identity = 59/64 (92.19%), Postives = 63/64 (98.44%), Query Frame = 1


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRV+EIVKKHDSGGLVWKRIKLT+TRKANAKKRLLRVWQNEAVLKACSEPPP 
Sbjct: 1  MAGAFWGTRVMEIVKKHDSGGLVWKRIKLTSTRKANAKKRLLRVWQNEAVLKACSEPPPS 60

Query: 61 KSSG 65
          K++G
Sbjct: 61 KTAG 64

[Close]

BLAST of Cp4.1LG12g10010 vs. NCBI nr
Match: gi|225425170|ref|XP_002264458.1| (PREDICTED: uncharacterized protein LOC100264285 [Vitis vinifera])

HSP 1 Score: 125.2 bits (313), Expect = 1.0e-25
Identity = 60/72 (83.33%), Postives = 64/72 (88.89%), Query Frame = 1


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPP 60
          MAGAFWGTRV+EIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLK CSEPPP 
Sbjct: 1  MAGAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKVCSEPPPS 60

Query: 61 KSSGDKISQVGK 73
          K+S    +  G+
Sbjct: 61 KTSAPGTNVTGE 72

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g10010 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g10010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDH2_CUCSA	8.5e-32	95.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G092000 PE=4 SV=1	[more]
V4TFF7_9ROSI	2.0e-25	92.06	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033198mg PE=4 SV=1	[more]
B9RH26_RICCO	2.6e-25	92.06	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1446310 PE=4 SV=1	[more]
M5XTZ7_PRUPE	5.9e-25	81.08	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014228mg PE=4 SV=1	[more]
W9QWB3_9ROSA	1.0e-24	87.69	Uncharacterized protein OS=Morus notabilis GN=L484_017495 PE=4 SV=1	[more]

BLAST of Cp4.1LG12g10010 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27435.1	4.9e-23	75.36	unknown protein	[more]

BLAST of Cp4.1LG12g10010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119884\|ref\|XP_008459894.1\|	9.3e-32	95.95	PREDICTED: uncharacterized protein LOC103498876 [Cucumis melo]	[more]
gi\|449445578\|ref\|XP_004140549.1\|	1.2e-31	95.95	PREDICTED: uncharacterized protein LOC101220585 [Cucumis sativus]	[more]
gi\|470149174\|ref\|XP_004310116.1\|	1.5e-26	88.57	PREDICTED: uncharacterized protein LOC101295884 [Fragaria vesca subsp. vesca]	[more]
gi\|1009167733\|ref\|XP_015902278.1\|	5.8e-26	92.19	PREDICTED: uncharacterized protein LOC107435231 [Ziziphus jujuba]	[more]
gi\|225425170\|ref\|XP_002264458.1\|	1.0e-25	83.33	PREDICTED: uncharacterized protein LOC100264285 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g10010.1	Cp4.1LG12g10010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37703	FAMILY NOT NAMED	coord: 1..75 score: 6.0
None	No IPR available	PANTHER	PTHR37703:SF1	SUBFAMILY NOT NAMED	coord: 1..75 score: 6.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g10010	Cucsa.349350	Cucumber (Gy14) v1	cgycpeB0907
Cp4.1LG12g10010	CmaCh17G014160	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g10010	CmaCh08G000130	Cucurbita maxima (Rimu)	cmacpeB905
Cp4.1LG12g10010	CmoCh08G000130	Cucurbita moschata (Rifu)	cmocpeB841
Cp4.1LG12g10010	CmoCh17G013640	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g10010	Cla001494	Watermelon (97103) v1	cpewmB156
Cp4.1LG12g10010	Csa6G092000	Cucumber (Chinese Long) v2	cpecuB142
Cp4.1LG12g10010	ClCG06G001860	Watermelon (Charleston Gray)	cpewcgB140
Cp4.1LG12g10010	CSPI06G07510	Wild cucumber (PI 183967)	cpecpiB144
Cp4.1LG12g10010	Lsi09G017550	Bottle gourd (USVL1VR-Ls)	cpelsiB103
Cp4.1LG12g10010	MELO3C035240.2	Melon (DHL92) v3.6.1	cpemedB140
Cp4.1LG12g10010	CsaV3_6G007910	Cucumber (Chinese Long) v3	cpecucB0166
Cp4.1LG12g10010	Bhi12G002142	Wax gourd	cpewgoB0175
Cp4.1LG12g10010	CsGy6G007540	Cucumber (Gy14) v2	cgybcpeB722
Cp4.1LG12g10010	Carg03818	Silver-seed gourd	carcpeB1355
Cp4.1LG12g10010	Carg11575	Silver-seed gourd	carcpeB0018

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g10010	Cucurbita pepo (Zucchini)	cpecpeB170
Cp4.1LG12g10010	Melon (DHL92) v3.5.1	cpemeB114