Cucsa.348780 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.348780
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	RmlC-like cupins superfamily protein
Location	scaffold03487 : 227981 .. 228809 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTACAAGGCAAAAGAAAAAAGATATCCATTGTTGAAAGAAACCCTTCTGAAGCCCCTCTTTAACATGGCAAACGAAGAAGAAGGGAATAACAACAACAACAACAGTCTCAAAATCATTGTAGAAAGAAACCCTTCTCAAGCCAAGCTTTCACAACTCAACATCCATCGTTGGCCAAAGTAAGTATCGTGTATATACGTTTAATTAATTAATTATTAAGCTTCTGGGTTTCTTTTTCTTCTAATAATCTCGTAATTCCATTTGTTTCTTTTTATTCTTGTTGAATGATTTTTATTATTAGATGGGGTTGTTCTGCTGGAAAATACCAACTGAAGTTTGAGGCAGAAGAGACTTGTTATCTAGTGAAAGGGAAAGTGAAAGCTTATCCTAAAGGAATCGATTCTTCTTCTTCTTCTTCATCGTCTTGTTGTGAAGAATATATTGAATTTGGAGCTGGGGATTTGGTCATTATTCCTAAAGGACTTAGTTGCACTTGGGATGTCTCTGTTGCTGTTGATAAATTCTATAAGTTTGAATCTCAATCTTAAGATTTTATTTTTCATTTTCTGCATTAATTAATTTCATCTTCACGTCGAAACGGAACGAGGTATATATAGTTTTCTTTTCAACTATTTATATACAGATCATACAGTTCATGAATTAAGCTGTAATGGAATTGGAAGTAGTTGACTTACTTAGTCTTGAAATGCAAATTAAGCAGTGGTTTAGAGAGAATTAATTCGATAGAATATAGACACCCATATATCAATTTTAACATTGTTTAAGGTAAGTGGAAAGATTAGAGATTTAAATCTTGTAATTAATTAGA

mRNA sequence

TTTTACAAGGCAAAAGAAAAAAGATATCCATTGTTGAAAGAAACCCTTCTGAAGCCCCTCTTTAACATGGCAAACGAAGAAGAAGGGAATAACAACAACAACAACAGTCTCAAAATCATTGTAGAAAGAAACCCTTCTCAAGCCAAGCTTTCACAACTCAACATCCATCGTTGGCCAAAATGGGGTTGTTCTGCTGGAAAATACCAACTGAAGTTTGAGGCAGAAGAGACTTGTTATCTAGTGAAAGGGAAAGTGAAAGCTTATCCTAAAGGAATCGATTCTTCTTCTTCTTCTTCATCGTCTTGTTGTGAAGAATATATTGAATTTGGAGCTGGGGATTTGGTCATTATTCCTAAAGGACTTAGTTGCACTTGGGATGTCTCTGTTGCTGTTGATAAATTCTATAAGTTTGAATCTCAATCTTAAGATTTTATTTTTCATTTTCTGCATTAATTAATTTCATCTTCACGTCGAAACGGAACGAGGTATATATAGTTTTCTTTTCAACTATTTATATACAGATCATACAGTTCATGAATTAAGCTGTAATGGAATTGGAAGTAGTTGACTTACTTAGTCTTGAAATGCAAATTAAGCAGTGGTTTAGAGAGAATTAATTCGATAGAATATAGACACCCATATATCAATTTTAACATTGTTTAAGGTAAGTGGAAAGATTAGAGATTTAAATCTTGTAATTAATTAGA

Coding sequence (CDS)

ATGGCAAACGAAGAAGAAGGGAATAACAACAACAACAACAGTCTCAAAATCATTGTAGAAAGAAACCCTTCTCAAGCCAAGCTTTCACAACTCAACATCCATCGTTGGCCAAAATGGGGTTGTTCTGCTGGAAAATACCAACTGAAGTTTGAGGCAGAAGAGACTTGTTATCTAGTGAAAGGGAAAGTGAAAGCTTATCCTAAAGGAATCGATTCTTCTTCTTCTTCTTCATCGTCTTGTTGTGAAGAATATATTGAATTTGGAGCTGGGGATTTGGTCATTATTCCTAAAGGACTTAGTTGCACTTGGGATGTCTCTGTTGCTGTTGATAAATTCTATAAGTTTGAATCTCAATCTTAA

Protein sequence

MANEEEGNNNNNNSLKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCCEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFESQS*

Homology

[Close]

BLAST of Cucsa.348780 vs. TrEMBL
Match: A0A058ZV10_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L01055 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.8e-40
Identity = 81/119 (68.07%), Postives = 100/119 (84.03%), Query Frame = 1


Query: 2   ANEEEGNNNNNNSLKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEETCYLVKG 61
           A+    ++++ N L+I+VER+P ++KLS+LNI  WPKWGC  GKYQLKF+AEETCYLVKG
Sbjct: 5   ASTPSSSSSSANDLRILVERDPPESKLSELNIKCWPKWGCPPGKYQLKFDAEETCYLVKG 64

Query: 62  KVKAYPKGIDSSSSSSSSCCE-EYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFESQS 120
           KVK YP+G  SS SS+S+  E +++EFGAGDLVIIPKGLSCTWDVSVAVDK+YKFES S
Sbjct: 65  KVKVYPRGSSSSPSSASASSEDQFVEFGAGDLVIIPKGLSCTWDVSVAVDKYYKFESSS 123

[Close]

BLAST of Cucsa.348780 vs. TrEMBL
Match: W9QZN5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015900 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.5e-39
Identity = 79/112 (70.54%), Postives = 93/112 (83.04%), Query Frame = 1


Query: 8   NNNNNNSLKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYP 67
           N++ NN+L+IIVERNPS+A+LS+L I  WPKWGCS GKYQLKF+AEETCYL+KGKVKAYP
Sbjct: 9   NSSENNNLRIIVERNPSEARLSELKIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYP 68

Query: 68  KGIDSSSSSSSSCCEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFESQS 120
           KG             E++EFGAGDLVIIPKG+SCTWDVS+AVDK+YKFES S
Sbjct: 69  KG-----------SSEFVEFGAGDLVIIPKGISCTWDVSLAVDKYYKFESSS 109

[Close]

BLAST of Cucsa.348780 vs. TrEMBL
Match: I1JPA0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G168900 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 4.8e-38
Identity = 77/110 (70.00%), Postives = 91/110 (82.73%), Query Frame = 1


Query: 10  NNNNSLKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKG 69
           ++N++L+I +ERNPSQ++L++LNI  WPKWGCS GKYQLKF+AEETCYLVKGKVKAYPKG
Sbjct: 4   DSNSNLRITIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLVKGKVKAYPKG 63

Query: 70  IDSSSSSSSSCCEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFESQS 120
                        E++EFGAGDLV IPKGLSCTWDVSVAVDK+YKFES S
Sbjct: 64  -----------SSEFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESNS 102

[Close]

BLAST of Cucsa.348780 vs. TrEMBL
Match: A0A0B2PNV2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_016498 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 6.2e-38
Identity = 77/110 (70.00%), Postives = 91/110 (82.73%), Query Frame = 1


Query: 10  NNNNSLKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKG 69
           ++N++L+I +ERNPSQ++L++LNI  WPKWGCS GKYQLKF+AEETCYLVKGKVKAYPKG
Sbjct: 4   DSNSNLRISIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLVKGKVKAYPKG 63

Query: 70  IDSSSSSSSSCCEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFESQS 120
                        E++EFGAGDLV IPKGLSCTWDVSVAVDK+YKFES S
Sbjct: 64  -----------SSEFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESNS 102

[Close]

BLAST of Cucsa.348780 vs. TrEMBL
Match: B9T5V9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0996080 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.8e-37
Identity = 77/105 (73.33%), Postives = 88/105 (83.81%), Query Frame = 1


Query: 15  LKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSS 74
           L+IIVE+NPS+++LS+LNI  WPKWGCS G+YQLKF+AEETCYL+KGKVKAYPKG     
Sbjct: 6   LRIIVEKNPSESRLSELNIKCWPKWGCSPGRYQLKFDAEETCYLLKGKVKAYPKG----- 65

Query: 75  SSSSSCCEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFESQS 120
                   EY+EFGAGDLVIIPKGLSCTWDVSVAVDK+YKFES S
Sbjct: 66  ------SSEYVEFGAGDLVIIPKGLSCTWDVSVAVDKYYKFESTS 99

[Close]

BLAST of Cucsa.348780 vs. TAIR10
Match: AT4G28703.1 (AT4G28703.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 137.9 bits (346), Expect = 4.1e-33
Identity = 65/102 (63.73%), Postives = 78/102 (76.47%), Query Frame = 1


Query: 16  KIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSS 75
           +IIVE+NPSQA+L +L    WPKWGCS GKY LK+EAEE CY+++GKVK YPK   SSSS
Sbjct: 7   RIIVEQNPSQARLDELKFKSWPKWGCSPGKYHLKYEAEEICYILRGKVKVYPKPPPSSSS 66

Query: 76  SSSSCCEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFES 118
            +    E  +EFGAGD+V  PKGLSCTWDVS++VDK Y F S
Sbjct: 67  DAE--VEWCVEFGAGDIVTFPKGLSCTWDVSLSVDKHYIFLS 106

[Close]

BLAST of Cucsa.348780 vs. TAIR10
Match: AT3G04300.1 (AT3G04300.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 132.1 bits (331), Expect = 2.3e-31
Identity = 60/102 (58.82%), Postives = 70/102 (68.63%), Query Frame = 1


Query: 15  LKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSS 74
           + I++E NPS  +LS L +  WPKW C  GKY L FE  ETCYLVKGKVK YPKG     
Sbjct: 1   MNIVIENNPSSRRLSDLGVMSWPKWSCQPGKYALVFEERETCYLVKGKVKVYPKG----- 60

Query: 75  SSSSSCCEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFE 117
                   E++EFGAGDLV IPKGLSCTWDVS+ +DK YKF+
Sbjct: 61  ------SSEFVEFGAGDLVTIPKGLSCTWDVSLFIDKHYKFD 91

[Close]

BLAST of Cucsa.348780 vs. TAIR10
Match: AT4G10300.1 (AT4G10300.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 120.2 bits (300), Expect = 8.9e-28
Identity = 54/106 (50.94%), Postives = 70/106 (66.04%), Query Frame = 1


Query: 11  NNNSLKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGI 70
           +   L I +E+NP ++KL+QL +  WPKWGC   K+   + A+ETCYL++GKVK YP G 
Sbjct: 40  STEKLGITIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYSAKETCYLLQGKVKVYPNGS 99

Query: 71  DSSSSSSSSCCEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFE 117
           D           E +E  AGD V+ PKG+SCTWDVSVAVDK Y+FE
Sbjct: 100 D-----------EGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQFE 134

[Close]

BLAST of Cucsa.348780 vs. TAIR10
Match: AT4G10280.1 (AT4G10280.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13
Identity = 36/96 (37.50%), Postives = 50/96 (52.08%), Query Frame = 1


Query: 21  RNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSC 80
           R  S  KL+QL +  WPKW  +  K+  +F+  ET Y ++GKVK    G D         
Sbjct: 52  RQASDTKLAQLGVASWPKWEGAPSKFPWEFKKTETIYFMEGKVKVNVDGYDEE------- 111

Query: 81  CEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFE 117
            EE  E G GD+V+ PK +   W+++ AV K Y  E
Sbjct: 112 -EETFEIGKGDVVVFPKDMKVVWEITEAVKKQYSLE 139

[Close]

BLAST of Cucsa.348780 vs. NCBI nr
Match: gi|449445646|ref|XP_004140583.1| (PREDICTED: uncharacterized protein LOC101208389 [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 3.6e-63
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1


Query: 1   MANEEEGNNNNNNSLKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEETCYLVK 60
           MANEEEGNNNNNNSLKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEETCYLVK
Sbjct: 1   MANEEEGNNNNNNSLKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEETCYLVK 60

Query: 61  GKVKAYPKGIDSSSSSSSSCCEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFESQS 120
           GKVKAYPKGIDSSSSSSSSCCEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFESQS
Sbjct: 61  GKVKAYPKGIDSSSSSSSSCCEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFESQS 119

[Close]

BLAST of Cucsa.348780 vs. NCBI nr
Match: gi|659120045|ref|XP_008459983.1| (PREDICTED: uncharacterized protein LOC103498932 [Cucumis melo])

HSP 1 Score: 240.0 bits (611), Expect = 2.2e-60
Identity = 118/125 (94.40%), Postives = 118/125 (94.40%), Query Frame = 1


Query: 1   MANEEEGNNNN------NNSLKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEE 60
           MANEE GNNNN      NNSLKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEE
Sbjct: 1   MANEEGGNNNNHNNPSTNNSLKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEE 60

Query: 61  TCYLVKGKVKAYPKGIDSSSSSSSSCCEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYK 120
           TCYLVKGKVKAYPKGIDSSSSSSSSCCEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYK
Sbjct: 61  TCYLVKGKVKAYPKGIDSSSSSSSSCCEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYK 120

[Close]

BLAST of Cucsa.348780 vs. NCBI nr
Match: gi|702509059|ref|XP_010040360.1| (PREDICTED: uncharacterized protein LOC104429154 [Eucalyptus grandis])

HSP 1 Score: 173.3 bits (438), Expect = 2.5e-40
Identity = 81/119 (68.07%), Postives = 100/119 (84.03%), Query Frame = 1


Query: 2   ANEEEGNNNNNNSLKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEETCYLVKG 61
           A+    ++++ N L+I+VER+P ++KLS+LNI  WPKWGC  GKYQLKF+AEETCYLVKG
Sbjct: 5   ASTPSSSSSSANDLRILVERDPPESKLSELNIKCWPKWGCPPGKYQLKFDAEETCYLVKG 64

Query: 62  KVKAYPKGIDSSSSSSSSCCE-EYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFESQS 120
           KVK YP+G  SS SS+S+  E +++EFGAGDLVIIPKGLSCTWDVSVAVDK+YKFES S
Sbjct: 65  KVKVYPRGSSSSPSSASASSEDQFVEFGAGDLVIIPKGLSCTWDVSVAVDKYYKFESSS 123

[Close]

BLAST of Cucsa.348780 vs. NCBI nr
Match: gi|1012180695|ref|XP_015968097.1| (PREDICTED: uncharacterized protein LOC107491707 [Arachis duranensis])

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-39
Identity = 79/114 (69.30%), Postives = 95/114 (83.33%), Query Frame = 1


Query: 6   EGNNNNNNSLKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEETCYLVKGKVKA 65
           E N++N+N+L+I +ERNPSQ++LS+LNI  WPKWGCS GKYQLKF+AEETCYL+KGKVKA
Sbjct: 3   EDNSSNSNNLRITIERNPSQSRLSELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKA 62

Query: 66  YPKGIDSSSSSSSSCCEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFESQS 120
           YPKG             +++EFGAGDLV IPKGLSCTWDVSVAVDK+YKFES+S
Sbjct: 63  YPKG-----------SSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESES 105

[Close]

BLAST of Cucsa.348780 vs. NCBI nr
Match: gi|703081972|ref|XP_010091831.1| (hypothetical protein L484_015900 [Morus notabilis])

HSP 1 Score: 169.5 bits (428), Expect = 3.6e-39
Identity = 79/112 (70.54%), Postives = 93/112 (83.04%), Query Frame = 1


Query: 8   NNNNNNSLKIIVERNPSQAKLSQLNIHRWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYP 67
           N++ NN+L+IIVERNPS+A+LS+L I  WPKWGCS GKYQLKF+AEETCYL+KGKVKAYP
Sbjct: 9   NSSENNNLRIIVERNPSEARLSELKIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYP 68

Query: 68  KGIDSSSSSSSSCCEEYIEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFESQS 120
           KG             E++EFGAGDLVIIPKG+SCTWDVS+AVDK+YKFES S
Sbjct: 69  KG-----------SSEFVEFGAGDLVIIPKGISCTWDVSLAVDKYYKFESSS 109

The following BLAST results are available for this feature:

BLAST of Cucsa.348780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A058ZV10_EUCGR	1.8e-40	68.07	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L01055 PE=4 SV=1	[more]
W9QZN5_9ROSA	2.5e-39	70.54	Uncharacterized protein OS=Morus notabilis GN=L484_015900 PE=4 SV=1	[more]
I1JPA0_SOYBN	4.8e-38	70.00	Uncharacterized protein OS=Glycine max GN=GLYMA_03G168900 PE=4 SV=1	[more]
A0A0B2PNV2_GLYSO	6.2e-38	70.00	Uncharacterized protein OS=Glycine soja GN=glysoja_016498 PE=4 SV=1	[more]
B9T5V9_RICCO	1.8e-37	73.33	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0996080 PE=4 SV=1	[more]

BLAST of Cucsa.348780 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28703.1	4.1e-33	63.73	RmlC-like cupins superfamily protein	[more]
AT3G04300.1	2.3e-31	58.82	RmlC-like cupins superfamily protein	[more]
AT4G10300.1	8.9e-28	50.94	RmlC-like cupins superfamily protein	[more]
AT4G10280.1	1.3e-13	37.50	RmlC-like cupins superfamily protein	[more]

BLAST of Cucsa.348780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445646\|ref\|XP_004140583.1\|	3.6e-63	100.00	PREDICTED: uncharacterized protein LOC101208389 [Cucumis sativus]	[more]
gi\|659120045\|ref\|XP_008459983.1\|	2.2e-60	94.40	PREDICTED: uncharacterized protein LOC103498932 [Cucumis melo]	[more]
gi\|702509059\|ref\|XP_010040360.1\|	2.5e-40	68.07	PREDICTED: uncharacterized protein LOC104429154 [Eucalyptus grandis]	[more]
gi\|1012180695\|ref\|XP_015968097.1\|	1.2e-39	69.30	PREDICTED: uncharacterized protein LOC107491707 [Arachis duranensis]	[more]
gi\|703081972\|ref\|XP_010091831.1\|	3.6e-39	70.54	hypothetical protein L484_015900 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008579	DUF861_Cupin_3
IPR011051	RmlC_Cupin_sf
IPR014710	RmlC-like_jellyroll

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.348780.1	Cucsa.348780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008579	Domain of unknown function DUF861, cupin-3	PFAM	PF05899	Cupin_3	coord: 30..113 score: 2.5
IPR011051	RmlC-like cupin domain	unknown	SSF51182	RmlC-like cupins	coord: 25..113 score: 7.6
IPR014710	RmlC-like jelly roll fold	GENE3D	G3DSA:2.60.120.10		coord: 14..115 score: 5.0
None	No IPR available	PANTHER	PTHR33271	FAMILY NOT NAMED	coord: 11..119 score: 1.5
None	No IPR available	PANTHER	PTHR33271:SF3	CUPIN DOMAIN-CONTAINING PROTEIN	coord: 11..119 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.348780	Cla007054	Watermelon (97103) v1	cgywmB626
Cucsa.348780	Csa6G087910	Cucumber (Chinese Long) v2	cgycuB490
Cucsa.348780	MELO3C022400	Melon (DHL92) v3.5.1	cgymeB564
Cucsa.348780	ClCG06G001330	Watermelon (Charleston Gray)	cgywcgB595
Cucsa.348780	CmaCh08G000490	Cucurbita maxima (Rimu)	cgycmaB0955
Cucsa.348780	CmoCh08G000490	Cucurbita moschata (Rifu)	cgycmoB0955
Cucsa.348780	Lsi09G018060	Bottle gourd (USVL1VR-Ls)	cgylsiB562
Cucsa.348780	Cp4.1LG17g09600	Cucurbita pepo (Zucchini)	cgycpeB0911
Cucsa.348780	MELO3C022400.2	Melon (DHL92) v3.6.1	cgymedB565
Cucsa.348780	CsaV3_6G007270	Cucumber (Chinese Long) v3	cgycucB532
Cucsa.348780	Cla97C06G110600	Watermelon (97103) v2	cgywmbB596
Cucsa.348780	Bhi12G002074	Wax gourd	cgywgoB696
Cucsa.348780	Carg04885	Silver-seed gourd	carcgyB0099

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.348780	Cucurbita pepo (Zucchini)	cgycpeB0907
Cucsa.348780	Silver-seed gourd	carcgyB0012
Cucsa.348780	Cucumber (Chinese Long) v3	cgycucB531
Cucsa.348780	Cucumber (Gy14) v1	cgycgyB129
Cucsa.348780	Cucurbita maxima (Rimu)	cgycmaB0951
Cucsa.348780	Cucurbita moschata (Rifu)	cgycmoB0951
Cucsa.348780	Wild cucumber (PI 183967)	cgycpiB516
Cucsa.348780	Wild cucumber (PI 183967)	cgycpiB517
Cucsa.348780	Cucumber (Chinese Long) v2	cgycuB489
Cucsa.348780	Watermelon (97103) v1	cgywmB625