Carg04885 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGATCAAAAGATTCCTTTTCTCTTCTTTTTCTTGTTGTTTCTCTATAAAAAACCCACAAATCCCACCCCTTCTCTTTTAATTTCCCCTAAAAAAATGGCCAATGAAGAAGGAAACAGTAACAATCCTTCAACAAACAACCTCAGAATCATCGTAGAAAGGAACCCTTCTCAAGCCAAGCTTTCTATGCTCAACATCCAGAGCTGGCCAAAGTAAGTATATTGTAATCTATCAGTTTAAGCTTACACGTAAGTTCGAGCCTTTGGCCTTTGGGTTCGAGCTAGGGTGGGTGATGGTTGAGTAATTTTTGTGTAGGTGGGGCTGCTCGGCGGGGAAATACCAGCTGAAGTTCGAGGCAGAAGAGACGTGCTACTTGGTGAAGGGAAAAGTGAAGGCTTATGCCAAAGGATCGGCCGAGACTGAATATACAGAATTCGGGGCTGGTGATTTGGTCACCATTCCTAAAGGCCTTAGCTGCACTTGGGATGTTTCTGTTGCTGTTGATAAGTTCTACAAGTTTGAATCTCCATCTTCATCTTAATTTGCTATTACCTCCATTTTCATTCTTTCCCCCCCCCC AGATCAAAAGATTCCTTTTCTCTTCTTTTTCTTGTTGTTTCTCTATAAAAAACCCACAAATCCCACCCCTTCTCTTTTAATTTCCCCTAAAAAAATGGCCAATGAAGAAGGAAACAGTAACAATCCTTCAACAAACAACCTCAGAATCATCGTAGAAAGGAACCCTTCTCAAGCCAAGCTTTCTATGCTCAACATCCAGAGCTGGCCAAAGTGGGGCTGCTCGGCGGGGAAATACCAGCTGAAGTTCGAGGCAGAAGAGACGTGCTACTTGGTGAAGGGAAAAGTGAAGGCTTATGCCAAAGGATCGGCCGAGACTGAATATACAGAATTCGGGGCTGGTGATTTGGTCACCATTCCTAAAGGCCTTAGCTGCACTTGGGATGTTTCTGTTGCTGTTGATAAGTTCTACAAGTTTGAATCTCCATCTTCATCTTAATTTGCTATTACCTCCATTTTCATTCTTTCCCCCCCCCC ATGGCCAATGAAGAAGGAAACAGTAACAATCCTTCAACAAACAACCTCAGAATCATCGTAGAAAGGAACCCTTCTCAAGCCAAGCTTTCTATGCTCAACATCCAGAGCTGGCCAAAGTGGGGCTGCTCGGCGGGGAAATACCAGCTGAAGTTCGAGGCAGAAGAGACGTGCTACTTGGTGAAGGGAAAAGTGAAGGCTTATGCCAAAGGATCGGCCGAGACTGAATATACAGAATTCGGGGCTGGTGATTTGGTCACCATTCCTAAAGGCCTTAGCTGCACTTGGGATGTTTCTGTTGCTGTTGATAAGTTCTACAAGTTTGAATCTCCATCTTCATCTTAA MANEEGNSNNPSTNNLRIIVERNPSQAKLSMLNIQSWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYAKGSAETEYTEFGAGDLVTIPKGLSCTWDVSVAVDKFYKFESPSSS
BLAST of Carg04885 vs. NCBI nr
Match: XP_022960185.1 (uncharacterized protein LOC111460998 [Cucurbita moschata] >XP_022960186.1 uncharacterized protein LOC111460998 [Cucurbita moschata] >XP_023513548.1 uncharacterized protein LOC111778119 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 230.3 bits (586), Expect = 3.2e-57 Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0
BLAST of Carg04885 vs. NCBI nr
Match: XP_023005099.1 (uncharacterized protein LOC111498188 [Cucurbita maxima] >XP_023005100.1 uncharacterized protein LOC111498188 [Cucurbita maxima] >XP_023005101.1 uncharacterized protein LOC111498188 [Cucurbita maxima]) HSP 1 Score: 229.2 bits (583), Expect = 7.1e-57 Identity = 111/113 (98.23%), Postives = 113/113 (100.00%), Query Frame = 0
BLAST of Carg04885 vs. NCBI nr
Match: PON37134.1 (RmlC-like cupins superfamily protein [Parasponia andersonii]) HSP 1 Score: 174.5 bits (441), Expect = 2.1e-40 Identity = 80/98 (81.63%), Postives = 91/98 (92.86%), Query Frame = 0
BLAST of Carg04885 vs. NCBI nr
Match: XP_015968097.1 (uncharacterized protein LOC107491707 [Arachis duranensis] >XP_016207597.1 uncharacterized protein LOC107648111 [Arachis ipaensis] >XP_025603150.1 uncharacterized protein LOC112695144 [Arachis hypogaea] >XP_025663363.1 uncharacterized protein LOC112758808 [Arachis hypogaea]) HSP 1 Score: 173.3 bits (438), Expect = 4.6e-40 Identity = 85/109 (77.98%), Postives = 97/109 (88.99%), Query Frame = 0
BLAST of Carg04885 vs. NCBI nr
Match: PON54578.1 (RmlC-like cupins superfamily protein [Trema orientalis]) HSP 1 Score: 173.3 bits (438), Expect = 4.6e-40 Identity = 79/98 (80.61%), Postives = 91/98 (92.86%), Query Frame = 0
BLAST of Carg04885 vs. TAIR10
Match: AT3G04300.1 (RmlC-like cupins superfamily protein) HSP 1 Score: 141.7 bits (356), Expect = 2.7e-34 Identity = 64/97 (65.98%), Postives = 75/97 (77.32%), Query Frame = 0
BLAST of Carg04885 vs. TAIR10
Match: AT4G28703.1 (RmlC-like cupins superfamily protein) HSP 1 Score: 135.2 bits (339), Expect = 2.5e-32 Identity = 66/102 (64.71%), Postives = 77/102 (75.49%), Query Frame = 0
BLAST of Carg04885 vs. TAIR10
Match: AT4G10300.1 (RmlC-like cupins superfamily protein) HSP 1 Score: 120.6 bits (301), Expect = 6.4e-28 Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of Carg04885 vs. TrEMBL
Match: tr|A0A2P5AKT6|A0A2P5AKT6_PARAD (RmlC-like cupins superfamily protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_322550 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.4e-40 Identity = 80/98 (81.63%), Postives = 91/98 (92.86%), Query Frame = 0
BLAST of Carg04885 vs. TrEMBL
Match: tr|A0A2P5C0K2|A0A2P5C0K2_9ROSA (RmlC-like cupins superfamily protein OS=Trema orientalis OX=63057 GN=TorRG33x02_301930 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 3.1e-40 Identity = 79/98 (80.61%), Postives = 91/98 (92.86%), Query Frame = 0
BLAST of Carg04885 vs. TrEMBL
Match: tr|W9QZN5|W9QZN5_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015900 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.2e-39 Identity = 83/113 (73.45%), Postives = 96/113 (84.96%), Query Frame = 0
BLAST of Carg04885 vs. TrEMBL
Match: tr|A0A2I4HRP8|A0A2I4HRP8_9ROSI (uncharacterized protein LOC109020765 OS=Juglans regia OX=51240 GN=LOC109020765 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.5e-39 Identity = 83/106 (78.30%), Postives = 95/106 (89.62%), Query Frame = 0
BLAST of Carg04885 vs. TrEMBL
Match: tr|A0A1R3FUQ3|A0A1R3FUQ3_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_30911 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 2.6e-39 Identity = 81/100 (81.00%), Postives = 90/100 (90.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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