Cucsa.337640 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.337640
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionZinc finger protein
Locationscaffold03356 : 688788 .. 689447 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCTTCTGACAAACCCATTAATTCAGATGATGAACATTGCAATCAAGATCAAGATTCCTCCAAAGTTCCTGAATCCGAGCAACAAAAACAACCCGAGACCGAAACCAAAACAAAGGATGAAACCCGAGTTTTCTACTGCAAATTCTGCAGTAGAAAGTTCTCCAATCTACAAGCATTAGGAGGCCATCAAAACGCCCATAAACGAGAAAGAGATATTGCCAAAAGAGAGAAGGCCGCCGCCGCAGCAGCAGCCGCCGGTGGAAGAACGACGGACGCCTTTGATTCAATTGGCTCTTTTTACCATCCTTACTATTCAGCAATGGCGATTCACTGTCTGCGAAACAAATCCCCTGGGATTCCGATTCGGCCCCAATCGGTGATTCGTAAACCGAGTCGGTCTCGAGTTGAATTGGGCGGCGGCGCCACCGCTGCTGCCTATGGATACCGGTGGTGGCCGAGAGAACAGTACCTGGCGGCGGCGGTGGTGGCGCAACAGCAACAAATACAAAGTGGGGGATTGTTACAAGGCGTTAACAATGGATTTGCATCCATGGCTATGGCGAATAGAAACGCTTCTTCTTCTTCTTCTTCTTCGCAGATTTTTGGTGCTGATCAGTACATTGTCAATGGCCTTGATTTATCTCTCAAACTTTGA

mRNA sequence

ATGTCTTCTTCTGACAAACCCATTAATTCAGATGATGAACATTGCAATCAAGATCAAGATTCCTCCAAAGTTCCTGAATCCGAGCAACAAAAACAACCCGAGACCGAAACCAAAACAAAGGATGAAACCCGAGTTTTCTACTGCAAATTCTGCAGTAGAAAGTTCTCCAATCTACAAGCATTAGGAGGCCATCAAAACGCCCATAAACGAGAAAGAGATATTGCCAAAAGAGAGAAGGCCGCCGCCGCAGCAGCAGCCGCCGGTGGAAGAACGACGGACGCCTTTGATTCAATTGGCTCTTTTTACCATCCTTACTATTCAGCAATGGCGATTCACTGTCTGCGAAACAAATCCCCTGGGATTCCGATTCGGCCCCAATCGGTGATTCGTAAACCGAGTCGGTCTCGAGTTGAATTGGGCGGCGGCGCCACCGCTGCTGCCTATGGATACCGGTGGTGGCCGAGAGAACAGTACCTGGCGGCGGCGGTGGTGGCGCAACAGCAACAAATACAAAGTGGGGGATTGTTACAAGGCGTTAACAATGGATTTGCATCCATGGCTATGGCGAATAGAAACGcttcttcttcttcttcttcttcGCAGATTTTTGGTGCTGATCAGTACATTGTCAATGGCCTTGATTTATCTCTCAAACTTTGA

Coding sequence (CDS)

ATGTCTTCTTCTGACAAACCCATTAATTCAGATGATGAACATTGCAATCAAGATCAAGATTCCTCCAAAGTTCCTGAATCCGAGCAACAAAAACAACCCGAGACCGAAACCAAAACAAAGGATGAAACCCGAGTTTTCTACTGCAAATTCTGCAGTAGAAAGTTCTCCAATCTACAAGCATTAGGAGGCCATCAAAACGCCCATAAACGAGAAAGAGATATTGCCAAAAGAGAGAAGGCCGCCGCCGCAGCAGCAGCCGCCGGTGGAAGAACGACGGACGCCTTTGATTCAATTGGCTCTTTTTACCATCCTTACTATTCAGCAATGGCGATTCACTGTCTGCGAAACAAATCCCCTGGGATTCCGATTCGGCCCCAATCGGTGATTCGTAAACCGAGTCGGTCTCGAGTTGAATTGGGCGGCGGCGCCACCGCTGCTGCCTATGGATACCGGTGGTGGCCGAGAGAACAGTACCTGGCGGCGGCGGTGGTGGCGCAACAGCAACAAATACAAAGTGGGGGATTGTTACAAGGCGTTAACAATGGATTTGCATCCATGGCTATGGCGAATAGAAACGCTTCTTCTTCTTCTTCTTCTTCGCAGATTTTTGGTGCTGATCAGTACATTGTCAATGGCCTTGATTTATCTCTCAAACTTTGA

Protein sequence

MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPGIPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVNNGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL*
Homology
[Close]
BLAST of Cucsa.337640 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 1.2e-11
Identity = 46/113 (40.71%), Postives = 56/113 (49.56%), Query Frame = 1 

Query: 2   SSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQAL 61
           SS   P++S  E  N        PE +QQ+QP          RVF C +C RKF + QAL
Sbjct: 55  SSLTLPLSSTSESSN--------PEQQQQQQPSVSK------RVFSCNYCQRKFYSSQAL 114

Query: 62  GGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCL 115
           GGHQNAHKRER +AKR      A    GR +       S Y    +A A+ CL
Sbjct: 115 GGHQNAHKRERTLAKRAMRMGLAGVFPGRGS------SSNYAAAATAAALSCL 147

[Close]
BLAST of Cucsa.337640 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.5e-11
Identity = 40/99 (40.40%), Postives = 54/99 (54.55%), Query Frame = 1 

Query: 36  ETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAF 95
           E+ T  E ++F C +C R F + QALGGHQNAHKRER +AKR +  AA+A+A        
Sbjct: 51  ESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASA-------- 110

Query: 96  DSIGSFYHPY-YSAMAIHCLRNKSPGIPIRPQSVIRKPS 134
                F HPY +S +  H   N    + I+  S+  K S
Sbjct: 111 -----FGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLS 136

[Close]
BLAST of Cucsa.337640 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.0e-10
Identity = 59/208 (28.37%), Postives = 90/208 (43.27%), Query Frame = 1 

Query: 20  DSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKR-- 79
           DS K   S        + +  D  RVF C +C RKF + QALGGHQNAHKRER +AKR  
Sbjct: 43  DSFKTSSSSTSHHQHQQEQLADP-RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQ 102

Query: 80  ------EKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPGIPIRPQSVIRK 139
                     ++A A G  +   F S+ S        + +H   N    + I+  S I K
Sbjct: 103 YYKMTLSSLPSSAFAFGHGSVSRFASMAS--------LPLHGSVNNRSTLGIQAHSTIHK 162

Query: 140 PSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVNNGFASMAMANR 199
           PS     LG   T+ ++ ++    ++     ++ ++  ++  G      N  ++M  A  
Sbjct: 163 PS----FLGRQTTSLSHVFKQSIHQKPTIGKMLPEKFHLEVAG------NNNSNMVAAKL 222

Query: 200 NASSSSSSSQIFGADQYIVNGLDLSLKL 220
                  S+Q    D      +DL+LKL
Sbjct: 223 ERIGHFKSNQ---EDHNQFKKIDLTLKL 228

[Close]
BLAST of Cucsa.337640 vs. Swiss-Prot
Match: LATE_ARATH (Protein LATE FLOWERING OS=Arabidopsis thaliana GN=LATE PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 1 

Query: 26 ESEQQKQPETETKTKDET----RVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAA 82
          E E++ +P  E    DE     R+F C FCSRKF + QALGGHQNAHK+ER  A+R K A
Sbjct: 11 EGEEEIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRA 70

[Close]
BLAST of Cucsa.337640 vs. Swiss-Prot
Match: ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.7e-08
Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 1 

Query: 29 QQKQPETETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAA 83
          Q  +P   + +  E+R + C++C R+F+N QALGGHQNAHK+ER + KR +  A
Sbjct: 24 QSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMLA 77

[Close]
BLAST of Cucsa.337640 vs. TrEMBL
Match: A0A0A0LBM7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819820 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 6.3e-121
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 1 

Query: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60
           MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA
Sbjct: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60

Query: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120
           LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120

Query: 121 IPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVN 180
           IPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVN
Sbjct: 121 IPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVN 180

Query: 181 NGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 220
           NGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL
Sbjct: 181 NGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 219

[Close]
BLAST of Cucsa.337640 vs. TrEMBL
Match: E5GBP2_CUCME (Zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.3e-89
Identity = 182/226 (80.53%), Postives = 187/226 (82.74%), Query Frame = 1 

Query: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60
           MSSSDK  N+ D   N +QDS K  ESEQ   PETE K K+ETRVFYCKFCSR FSNLQA
Sbjct: 1   MSSSDKS-NASDHERNYNQDSFK--ESEQ---PETEAKAKEETRVFYCKFCSRNFSNLQA 60

Query: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120
           LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTD FDSIGSFYHPYYS MAIH LRNKSPG
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDVFDSIGSFYHPYYSVMAIHSLRNKSPG 120

Query: 121 IPIRPQSVIRKPSRSRVELGGG-------ATAAAYGYRWWPREQYLAAAVVAQQQQIQSG 180
            PIRPQSVIRKPSRSRVEL GG       A AAAYGYRWWPREQY+AA   AQQQQIQSG
Sbjct: 121 FPIRPQSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWWPREQYMAALAAAQQQQIQSG 180

Query: 181 GLLQGVNNGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 220
           GLLQG NNGF S+AM N NA SSSSS QIFGADQ IVNGLDLSLKL
Sbjct: 181 GLLQGFNNGFESIAMENINA-SSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]
BLAST of Cucsa.337640 vs. TrEMBL
Match: A0A061GIJ6_THECC (C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao GN=TCM_036928 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.7e-15
Identity = 63/151 (41.72%), Postives = 80/151 (52.98%), Query Frame = 1 

Query: 12  DEHCNQDQ---DSSKVP-ESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQALGGHQNA 71
           D   NQ+    DS K    S+    PET   T  E RVF C +C RKF + QALGGHQNA
Sbjct: 50  DHRFNQELNLIDSLKTAGSSDSSTAPETPQPTDAEQRVFSCNYCQRKFYSSQALGGHQNA 109

Query: 72  HKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMA---IHCLRNKSPGIPIR 131
           HKRER +AKR +   A  AA   +  AF     F+H +YS++A   +H   N+S GI + 
Sbjct: 110 HKRERTLAKRGQRMGAHIAA---SATAFGH-PYFHHNHYSSLASLPLHGAYNRSLGIQV- 169

Query: 132 PQSVIRKPSRSRVELGGGATAAAYGYRWWPR 156
             S+I KPS      G G   + YG+  W R
Sbjct: 170 -HSMIHKPSHISSSTGFG---SVYGHHSWSR 191

[Close]
BLAST of Cucsa.337640 vs. TrEMBL
Match: B9HAU4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s27760g PE=4 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 4.0e-14
Identity = 75/211 (35.55%), Postives = 96/211 (45.50%), Query Frame = 1 

Query: 20  DSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREK 79
           DSSK         PET   T  E RVF C +C RKF + QALGGHQNAHKRER +AKR  
Sbjct: 80  DSSKT-------SPETPQGTDAEQRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGH 139

Query: 80  AAAAAAAAGGRTTDAFDSIGSFYHPYY-----SAMAIHCLRNKSPGIPIRPQSVIRKPSR 139
               +  A         SI ++ HPY+     S+MA   L  +S GI +   S+I KPS 
Sbjct: 140 RLIGSQLAA--------SIAAYGHPYFHHHHHSSMASLPLHGRSLGIQV--HSMIHKPSH 199

Query: 140 SRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVNNGFASMAMANRNAS 199
               +G G     YG+  W R            QQ   G L   + N + ++A A+  A 
Sbjct: 200 LSSSIGFG---NMYGHGSWSRP--------PMDQQPGIGKL--SMENYYMNIATASSRAG 259

Query: 200 ------SSSSSSQIFGADQYIVNGLDLSLKL 220
                   +SS  +       +  LDLSLKL
Sbjct: 260 VGRFNLERTSSGHLKTNQDDHIQKLDLSLKL 260

[Close]
BLAST of Cucsa.337640 vs. TrEMBL
Match: F6H3J5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05930 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.8e-14
Identity = 74/205 (36.10%), Postives = 98/205 (47.80%), Query Frame = 1 

Query: 30  QKQPETETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAAAAAAGG 89
           Q   E       E RVF C +C RKF + QALGGHQNAHKRER +AKR +   A   A  
Sbjct: 91  QTSSEIPQPADAEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRLGAPMVA-- 150

Query: 90  RTTDAFDSIGSFYHPYYSAMA---IHCLRNKSPGIPIRPQSVIRKPSRSRVELGGGATAA 149
               AF     F+H +YS+MA   +H   N+S GI +   S+I KPS +    G G    
Sbjct: 151 -AATAFGH-PYFHHQHYSSMASLPLHGAYNRSLGIQV--HSMIHKPSLTTPSSGSG---N 210

Query: 150 AYGYRWW---PREQYLAAAVVAQQ---QQIQSGGLLQGVNNGFASM-AMANRNASSSSSS 209
            YG+R W   P +Q  A   +A +   + + +G L +G    F ++  M N  A+     
Sbjct: 211 LYGHRSWSRPPIDQQPAVGRLAVENCHEGVTAGPLSRGGIGRFDTVRMMINSQANEGIGG 270

Query: 210 SQIFGADQYIVN-----GLDLSLKL 220
               G  +   N      LDLSLKL
Sbjct: 271 FCWTGGGRLKTNQDELQKLDLSLKL 286

[Close]
BLAST of Cucsa.337640 vs. TAIR10
Match: AT1G66140.1 (AT1G66140.1 zinc finger protein 4)

HSP 1 Score: 71.6 bits (174), Expect = 6.7e-13
Identity = 46/113 (40.71%), Postives = 56/113 (49.56%), Query Frame = 1 

Query: 2   SSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQAL 61
           SS   P++S  E  N        PE +QQ+QP          RVF C +C RKF + QAL
Sbjct: 55  SSLTLPLSSTSESSN--------PEQQQQQQPSVSK------RVFSCNYCQRKFYSSQAL 114

Query: 62  GGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCL 115
           GGHQNAHKRER +AKR      A    GR +       S Y    +A A+ CL
Sbjct: 115 GGHQNAHKRERTLAKRAMRMGLAGVFPGRGS------SSNYAAAATAAALSCL 147

[Close]
BLAST of Cucsa.337640 vs. TAIR10
Match: AT5G25160.1 (AT5G25160.1 zinc finger protein 3)

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-12
Identity = 40/99 (40.40%), Postives = 54/99 (54.55%), Query Frame = 1 

Query: 36  ETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAF 95
           E+ T  E ++F C +C R F + QALGGHQNAHKRER +AKR +  AA+A+A        
Sbjct: 51  ESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASA-------- 110

Query: 96  DSIGSFYHPY-YSAMAIHCLRNKSPGIPIRPQSVIRKPS 134
                F HPY +S +  H   N    + I+  S+  K S
Sbjct: 111 -----FGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLS 136

[Close]
BLAST of Cucsa.337640 vs. TAIR10
Match: AT5G10970.1 (AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-11
Identity = 47/134 (35.07%), Postives = 62/134 (46.27%), Query Frame = 1 

Query: 33  PETETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAAAAAAGGRTT 92
           P     T  E ++F C +C R F + QALGGHQNAHKRER +AKR +  A+AAA G    
Sbjct: 91  PSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFG---- 150

Query: 93  DAFDSIGSFYHPYYSAMAIHCLRNKSPGIPIRPQSVIRKPSRSRVELGGGATAAAYGYRW 152
                     HPY  A      +  +  + I+  S+  KPS   V  GG      YG   
Sbjct: 151 ----------HPYGFAPVPFHGQYSNRTLGIQAHSMSHKPSSYNV-YGG-----EYGQIN 204

Query: 153 WPREQYLAAAVVAQ 167
           W R   +    +A+
Sbjct: 211 WSRIPLVQQPAIAK 204

[Close]
BLAST of Cucsa.337640 vs. TAIR10
Match: AT1G80730.1 (AT1G80730.1 zinc-finger protein 1)

HSP 1 Score: 66.2 bits (160), Expect = 2.8e-11
Identity = 59/208 (28.37%), Postives = 90/208 (43.27%), Query Frame = 1 

Query: 20  DSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKR-- 79
           DS K   S        + +  D  RVF C +C RKF + QALGGHQNAHKRER +AKR  
Sbjct: 43  DSFKTSSSSTSHHQHQQEQLADP-RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQ 102

Query: 80  ------EKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPGIPIRPQSVIRK 139
                     ++A A G  +   F S+ S        + +H   N    + I+  S I K
Sbjct: 103 YYKMTLSSLPSSAFAFGHGSVSRFASMAS--------LPLHGSVNNRSTLGIQAHSTIHK 162

Query: 140 PSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVNNGFASMAMANR 199
           PS     LG   T+ ++ ++    ++     ++ ++  ++  G      N  ++M  A  
Sbjct: 163 PS----FLGRQTTSLSHVFKQSIHQKPTIGKMLPEKFHLEVAG------NNNSNMVAAKL 222

Query: 200 NASSSSSSSQIFGADQYIVNGLDLSLKL 220
                  S+Q    D      +DL+LKL
Sbjct: 223 ERIGHFKSNQ---EDHNQFKKIDLTLKL 228

[Close]
BLAST of Cucsa.337640 vs. TAIR10
Match: AT5G48890.1 (AT5G48890.1 C2H2-like zinc finger protein)

HSP 1 Score: 65.1 bits (157), Expect = 6.2e-11
Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 1 

Query: 26 ESEQQKQPETETKTKDET----RVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAA 82
          E E++ +P  E    DE     R+F C FCSRKF + QALGGHQNAHK+ER  A+R K A
Sbjct: 11 EGEEEIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRA 70

[Close]
BLAST of Cucsa.337640 vs. NCBI nr
Match: gi|449437708|ref|XP_004136633.1| (PREDICTED: zinc finger protein 1-like [Cucumis sativus])

HSP 1 Score: 441.4 bits (1134), Expect = 9.1e-121
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 1 

Query: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60
           MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA
Sbjct: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60

Query: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120
           LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120

Query: 121 IPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVN 180
           IPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVN
Sbjct: 121 IPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVN 180

Query: 181 NGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 220
           NGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL
Sbjct: 181 NGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 219

[Close]
BLAST of Cucsa.337640 vs. NCBI nr
Match: gi|659085798|ref|XP_008443609.1| (PREDICTED: uncharacterized protein LOC103487164 [Cucumis melo])

HSP 1 Score: 337.4 bits (864), Expect = 1.8e-89
Identity = 182/226 (80.53%), Postives = 187/226 (82.74%), Query Frame = 1 

Query: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60
           MSSSDK  N+ D   N +QDS K  ESEQ   PETE K K+ETRVFYCKFCSR FSNLQA
Sbjct: 1   MSSSDKS-NASDHERNYNQDSFK--ESEQ---PETEAKAKEETRVFYCKFCSRNFSNLQA 60

Query: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120
           LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTD FDSIGSFYHPYYS MAIH LRNKSPG
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDVFDSIGSFYHPYYSVMAIHSLRNKSPG 120

Query: 121 IPIRPQSVIRKPSRSRVELGGG-------ATAAAYGYRWWPREQYLAAAVVAQQQQIQSG 180
            PIRPQSVIRKPSRSRVEL GG       A AAAYGYRWWPREQY+AA   AQQQQIQSG
Sbjct: 121 FPIRPQSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWWPREQYMAALAAAQQQQIQSG 180

Query: 181 GLLQGVNNGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 220
           GLLQG NNGF S+AM N NA SSSSS QIFGADQ IVNGLDLSLKL
Sbjct: 181 GLLQGFNNGFESIAMENINA-SSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]
BLAST of Cucsa.337640 vs. NCBI nr
Match: gi|590572013|ref|XP_007011752.1| (C2H2 and C2HC zinc fingers superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 89.7 bits (221), Expect = 6.7e-15
Identity = 63/151 (41.72%), Postives = 80/151 (52.98%), Query Frame = 1 

Query: 12  DEHCNQDQ---DSSKVP-ESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQALGGHQNA 71
           D   NQ+    DS K    S+    PET   T  E RVF C +C RKF + QALGGHQNA
Sbjct: 50  DHRFNQELNLIDSLKTAGSSDSSTAPETPQPTDAEQRVFSCNYCQRKFYSSQALGGHQNA 109

Query: 72  HKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMA---IHCLRNKSPGIPIR 131
           HKRER +AKR +   A  AA   +  AF     F+H +YS++A   +H   N+S GI + 
Sbjct: 110 HKRERTLAKRGQRMGAHIAA---SATAFGH-PYFHHNHYSSLASLPLHGAYNRSLGIQV- 169

Query: 132 PQSVIRKPSRSRVELGGGATAAAYGYRWWPR 156
             S+I KPS      G G   + YG+  W R
Sbjct: 170 -HSMIHKPSHISSSTGFG---SVYGHHSWSR 191

[Close]
BLAST of Cucsa.337640 vs. NCBI nr
Match: gi|470111423|ref|XP_004291947.1| (PREDICTED: zinc finger protein 1-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 88.2 bits (217), Expect = 2.0e-14
Identity = 81/231 (35.06%), Postives = 113/231 (48.92%), Query Frame = 1 

Query: 1   MSSSDKPINSDDEHCNQDQ---DSSKVP-ESEQQKQPETETKTKDETRVFYCKFCSRKFS 60
           +SS+ K   S++   N +    DS ++   S +  Q     +   E RVF C +C RKF 
Sbjct: 58  LSSTSKDSTSNNSGLNPELNLIDSLQMGGSSSETDQSSPGDQGAAEPRVFSCNYCQRKFY 117

Query: 61  NLQALGGHQNAHKRERDIAK---REKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMA--- 120
           + QALGGHQNAHKRER +AK   R+  A+AAAAAG      F    +  HPY+S++A   
Sbjct: 118 SSQALGGHQNAHKRERTLAKRGQRQLMASAAAAAGLGGYPYFHHHQN--HPYFSSLASLP 177

Query: 121 IH-CLRNKSPGIPIRPQSVIRKPSRSRVELGGGATAAAYGYR-WWPREQYLAAAVVAQQQ 180
           +H    NKS  + I+  S+I KPS S   +G G++  + G+R   P      A      Q
Sbjct: 178 LHGAYNNKS--LDIQVHSMIHKPSGSGSGIGFGSSYGSRGHRSSRPLFDQQPAIGKLAAQ 237

Query: 181 QIQSGGLLQGVNNGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 220
             Q+   L+G         M   N +   S S+     Q  +  LDLSLKL
Sbjct: 238 NFQTTTSLRGSGTTVGRFDMT--NVAWLESGSRFRSGQQEEMKKLDLSLKL 282

[Close]
BLAST of Cucsa.337640 vs. NCBI nr
Match: gi|566178478|ref|XP_002309664.2| (hypothetical protein POPTR_0006s27760g [Populus trichocarpa])

HSP 1 Score: 86.7 bits (213), Expect = 5.7e-14
Identity = 75/211 (35.55%), Postives = 96/211 (45.50%), Query Frame = 1 

Query: 20  DSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREK 79
           DSSK         PET   T  E RVF C +C RKF + QALGGHQNAHKRER +AKR  
Sbjct: 80  DSSKT-------SPETPQGTDAEQRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGH 139

Query: 80  AAAAAAAAGGRTTDAFDSIGSFYHPYY-----SAMAIHCLRNKSPGIPIRPQSVIRKPSR 139
               +  A         SI ++ HPY+     S+MA   L  +S GI +   S+I KPS 
Sbjct: 140 RLIGSQLAA--------SIAAYGHPYFHHHHHSSMASLPLHGRSLGIQV--HSMIHKPSH 199

Query: 140 SRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVNNGFASMAMANRNAS 199
               +G G     YG+  W R            QQ   G L   + N + ++A A+  A 
Sbjct: 200 LSSSIGFG---NMYGHGSWSRP--------PMDQQPGIGKL--SMENYYMNIATASSRAG 259

Query: 200 ------SSSSSSQIFGADQYIVNGLDLSLKL 220
                   +SS  +       +  LDLSLKL
Sbjct: 260 VGRFNLERTSSGHLKTNQDDHIQKLDLSLKL 260

The following BLAST results are available for this feature:
BLAST of Cucsa.337640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZFP4_ARATH1.2e-1140.71Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2[more]
ZFP3_ARATH4.5e-1140.40Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1[more]
ZFP1_ARATH5.0e-1028.37Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1[more]
LATE_ARATH1.1e-0953.33Protein LATE FLOWERING OS=Arabidopsis thaliana GN=LATE PE=2 SV=1[more]
ZFP6_ARATH4.7e-0846.30Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1[more]
BLAST of Cucsa.337640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBM7_CUCSA6.3e-121100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819820 PE=4 SV=1[more]
E5GBP2_CUCME1.3e-8980.53Zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A061GIJ6_THECC4.7e-1541.72C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao GN=T... [more]
B9HAU4_POPTR4.0e-1435.55Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s27760g PE=4 SV=2[more]
F6H3J5_VITVI8.8e-1436.10Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05930 PE=4 SV=... [more]
BLAST of Cucsa.337640 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G66140.16.7e-1340.71 zinc finger protein 4[more]
AT5G25160.12.5e-1240.40 zinc finger protein 3[more]
AT5G10970.12.1e-1135.07 C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G80730.12.8e-1128.37 zinc-finger protein 1[more]
AT5G48890.16.2e-1153.33 C2H2-like zinc finger protein[more]
BLAST of Cucsa.337640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437708|ref|XP_004136633.1|9.1e-121100.00PREDICTED: zinc finger protein 1-like [Cucumis sativus][more]
gi|659085798|ref|XP_008443609.1|1.8e-8980.53PREDICTED: uncharacterized protein LOC103487164 [Cucumis melo][more]
gi|590572013|ref|XP_007011752.1|6.7e-1541.72C2H2 and C2HC zinc fingers superfamily protein, putative [Theobroma cacao][more]
gi|470111423|ref|XP_004291947.1|2.0e-1435.06PREDICTED: zinc finger protein 1-like [Fragaria vesca subsp. vesca][more]
gi|566178478|ref|XP_002309664.2|5.7e-1435.55hypothetical protein POPTR_0006s27760g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.337640.1Cucsa.337640.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 48..68
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 46..73
score: 11
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 43..73
score: 4.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.337640Cla017429Watermelon (97103) v1cgywmB609
Cucsa.337640Csa3G819820Cucumber (Chinese Long) v2cgycuB478
Cucsa.337640MELO3C009744Melon (DHL92) v3.5.1cgymeB558
Cucsa.337640ClCG10G016320Watermelon (Charleston Gray)cgywcgB579
Cucsa.337640CSPI03G37660Wild cucumber (PI 183967)cgycpiB504
Cucsa.337640CmaCh14G005030Cucurbita maxima (Rimu)cgycmaB0926
Cucsa.337640CmoCh14G005080Cucurbita moschata (Rifu)cgycmoB0926
Cucsa.337640Lsi03G016240Bottle gourd (USVL1VR-Ls)cgylsiB551
Cucsa.337640MELO3C009744.2Melon (DHL92) v3.6.1cgymedB559
Cucsa.337640CsaV3_3G040020Cucumber (Chinese Long) v3cgycucB523
Cucsa.337640Cla97C10G199240Watermelon (97103) v2cgywmbB582
Cucsa.337640Bhi11G002330Wax gourdcgywgoB677
Cucsa.337640Carg03493Silver-seed gourdcarcgyB0296
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.337640Cucurbita maxima (Rimu)cgycmaB0938
Cucsa.337640Cucurbita maxima (Rimu)cgycmaB0942
Cucsa.337640Cucurbita maxima (Rimu)cgycmaB0943
Cucsa.337640Cucurbita moschata (Rifu)cgycmoB0937
Cucsa.337640Cucurbita moschata (Rifu)cgycmoB0942
Cucsa.337640Cucurbita moschata (Rifu)cgycmoB0943
Cucsa.337640Cucurbita pepo (Zucchini)cgycpeB0888
Cucsa.337640Cucurbita pepo (Zucchini)cgycpeB0900
Cucsa.337640Cucurbita pepo (Zucchini)cgycpeB0901
Cucsa.337640Bottle gourd (USVL1VR-Ls)cgylsiB546
Cucsa.337640Silver-seed gourdcarcgyB0198
Cucsa.337640Silver-seed gourdcarcgyB0199
Cucsa.337640Wax gourdcgywgoB674
Cucsa.337640Wax gourdcgywgoB687