ClCG10G016320 (gene) Watermelon (Charleston Gray)

Overview
NameClCG10G016320
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionZinc finger protein
LocationCG_Chr10 : 30983530 .. 30984162 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCTTCCGACAAATCCAACGCCTCTGATGATGAACATTACAATCAAGATTCTTCCGAAGTTCCGGACTCGAAACCGAGGCACGAATCGAAAACGAAGGACCAACCCCGAGTTTTTTACTGCAAATTCTGCAGTAGAAAGTTCTCGAATCTACAGGCTTTAGGAGGCCATCAAAACGCCCATAAACGAGAAAGAGACATCGCCAAAAGAGAGAAGGCCGCCGCCGTGAGAAGTTCGGACGCCTTTGATTCCGTTGGCTGTTTTTACCATCCGTATTATTCCGCAATGGCGATTCACTCTCTGCGAAACAAAGCCCTAGGGTTTCCGATTCGGCCGACGATTCGTAAACCGAGTCAATCCCGATTTGAATTGGGCAGCGCCGCTGCCTACGGATACCGATGGTGGTCGACAGAACAATACATGGCAGCGGCGGAGCAGCAGCAGCAGCAATTACGGGCCGGGGGATTATTGCAAGGCGTTAATAACGGTACTGGAAGAGTGGATTTAGCGGCAACTGGATTCGAATCCATAGCCATATTGGCCAATCGAAACGCTGCTTCTTCTTCTTCGCACATTTTTGGTGCTGATCAGTACAGTATCAACGGCCTTGATTTGTCTCTCAAACTTTGA

mRNA sequence

ATGTCTTCTTCCGACAAATCCAACGCCTCTGATGATGAACATTACAATCAAGATTCTTCCGAAGTTCCGGACTCGAAACCGAGGCACGAATCGAAAACGAAGGACCAACCCCGAGTTTTTTACTGCAAATTCTGCAGTAGAAAGTTCTCGAATCTACAGGCTTTAGGAGGCCATCAAAACGCCCATAAACGAGAAAGAGACATCGCCAAAAGAGAGAAGGCCGCCGCCGTGAGAAGTTCGGACGCCTTTGATTCCGTTGGCTGTTTTTACCATCCGTATTATTCCGCAATGGCGATTCACTCTCTGCGAAACAAAGCCCTAGGGTTTCCGATTCGGCCGACGATTCGTAAACCGAGTCAATCCCGATTTGAATTGGGCAGCGCCGCTGCCTACGGATACCGATGGTGGTCGACAGAACAATACATGGCAGCGGCGGAGCAGCAGCAGCAGCAATTACGGGCCGGGGGATTATTGCAAGGCGTTAATAACGGTACTGGAAGAGTGGATTTAGCGGCAACTGGATTCGAATCCATAGCCATATTGGCCAATCGAAACGCTGCTTCTTCTTCTTCGCACATTTTTGGTGCTGATCAGTACAGTATCAACGGCCTTGATTTGTCTCTCAAACTTTGA

Coding sequence (CDS)

ATGTCTTCTTCCGACAAATCCAACGCCTCTGATGATGAACATTACAATCAAGATTCTTCCGAAGTTCCGGACTCGAAACCGAGGCACGAATCGAAAACGAAGGACCAACCCCGAGTTTTTTACTGCAAATTCTGCAGTAGAAAGTTCTCGAATCTACAGGCTTTAGGAGGCCATCAAAACGCCCATAAACGAGAAAGAGACATCGCCAAAAGAGAGAAGGCCGCCGCCGTGAGAAGTTCGGACGCCTTTGATTCCGTTGGCTGTTTTTACCATCCGTATTATTCCGCAATGGCGATTCACTCTCTGCGAAACAAAGCCCTAGGGTTTCCGATTCGGCCGACGATTCGTAAACCGAGTCAATCCCGATTTGAATTGGGCAGCGCCGCTGCCTACGGATACCGATGGTGGTCGACAGAACAATACATGGCAGCGGCGGAGCAGCAGCAGCAGCAATTACGGGCCGGGGGATTATTGCAAGGCGTTAATAACGGTACTGGAAGAGTGGATTTAGCGGCAACTGGATTCGAATCCATAGCCATATTGGCCAATCGAAACGCTGCTTCTTCTTCTTCGCACATTTTTGGTGCTGATCAGTACAGTATCAACGGCCTTGATTTGTCTCTCAAACTTTGA

Protein sequence

MSSSDKSNASDDEHYNQDSSEVPDSKPRHESKTKDQPRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAVRSSDAFDSVGCFYHPYYSAMAIHSLRNKALGFPIRPTIRKPSQSRFELGSAAAYGYRWWSTEQYMAAAEQQQQQLRAGGLLQGVNNGTGRVDLAATGFESIAILANRNAASSSSHIFGADQYSINGLDLSLKL
Homology
[Close]
BLAST of ClCG10G016320 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.6e-12
Identity = 49/125 (39.20%), Postives = 61/125 (48.80%), Query Frame = 1 

Query: 6   KSNASDDEHYNQDSSEVPDSKPRHESKTKDQ---PRVFYCKFCSRKFSNLQALGGHQNAH 65
           +  A+  E    DS +   S   H    ++Q   PRVF C +C RKF + QALGGHQNAH
Sbjct: 31  RGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAH 90

Query: 66  KRERDIAKREKAAAVRSSDAFDSVGCFYHPYYSAMA------IH-SLRNKA-LGFPIRPT 120
           KRER +AKR +   +  S    S   F H   S  A      +H S+ N++ LG     T
Sbjct: 91  KRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHST 150

[Close]
BLAST of ClCG10G016320 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.1e-10
Identity = 43/112 (38.39%), Postives = 53/112 (47.32%), Query Frame = 1 

Query: 29  HESKTKDQPRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAVRSSDAFDSVGC 88
           +ES T  + ++F C +C R F + QALGGHQNAHKRER +AKR +  A        S   
Sbjct: 50  NESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAA-------SASA 109

Query: 89  FYHPY-YSAMAIHSLRN--KALGFPIRPTIRKPSQSRFELGSAAAYGYRWWS 138
           F HPY +S +  H   N  ++LG        K S      G    YG   WS
Sbjct: 110 FGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLSSYN---GFGGHYGQINWS 151

[Close]
BLAST of ClCG10G016320 vs. Swiss-Prot
Match: LATE_ARATH (Protein LATE FLOWERING OS=Arabidopsis thaliana GN=LATE PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 43/111 (38.74%), Postives = 60/111 (54.05%), Query Frame = 1 

Query: 12  DEHYNQDSSEVPDS-KPRHESKTKDQP----RVFYCKFCSRKFSNLQALGGHQNAHKRER 71
           ++HY+Q   E  +  KP  E+   D+     R+F C FCSRKF + QALGGHQNAHK+ER
Sbjct: 2   EDHYHQVEVEGEEEIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKER 61

Query: 72  DIAKREKAA--AVRSSDAFDSVGCFYHPYYSAMAIHSLRNKALGFPIRPTI 116
             A+R K A   V ++D   ++  F     S+ + H L    LG+P   ++
Sbjct: 62  TAARRAKRAYDFVNNNDFLHTLPVF----LSSPSQHHL--TILGYPASASV 106

[Close]
BLAST of ClCG10G016320 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-09
Identity = 32/61 (52.46%), Postives = 38/61 (62.30%), Query Frame = 1 

Query: 25 SKPRHESKTKDQPRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAVRSSDAFD 84
          S   + S   +QPRVF C +C RKF + QALGGHQNAHK ER +AK+ +    RSS+  D
Sbjct: 37 SSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSR-ELFRSSNTVD 96

Query: 85 S 86
          S
Sbjct: 97 S 96

[Close]
BLAST of ClCG10G016320 vs. Swiss-Prot
Match: ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.0e-09
Identity = 31/74 (41.89%), Postives = 42/74 (56.76%), Query Frame = 1 

Query: 25 SKPRHESKTKDQPRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAVRSSDAFD 84
          S+PR  S +  + R + C++C R+F+N QALGGHQNAHK+ER + KR +  A R      
Sbjct: 26 SEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMLATRGLPRHH 85

Query: 85 SVGCFYHPYYSAMA 99
          +     +P  SA A
Sbjct: 86 NFHPHTNPLLSAFA 99

[Close]
BLAST of ClCG10G016320 vs. TrEMBL
Match: A0A0A0LBM7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819820 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 4.0e-72
Identity = 159/230 (69.13%), Postives = 178/230 (77.39%), Query Frame = 1 

Query: 1   MSSSDKSNASDDEHYNQD--SSEVPDSK----PRHESKTKDQPRVFYCKFCSRKFSNLQA 60
           MSSSDK   SDDEH NQD  SS+VP+S+    P  E+KTKD+ RVFYCKFCSRKFSNLQA
Sbjct: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60

Query: 61  LGGHQNAHKRERDIAKREKAAAV------RSSDAFDSVGCFYHPYYSAMAIHSLRNKALG 120
           LGGHQNAHKRERDIAKREKAAA       R++DAFDS+G FYHPYYSAMAIH LRNK+ G
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120

Query: 121 FPIRP--TIRKPSQSRFELG---SAAAYGYRWWSTEQYMAAA-EQQQQQLRAGGLLQGVN 180
            PIRP   IRKPS+SR ELG   +AAAYGYRWW  EQY+AAA   QQQQ+++GGLLQGVN
Sbjct: 121 IPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVN 180

Query: 181 NGTGRVDLAATGFESIAILANRNA--ASSSSHIFGADQYSINGLDLSLKL 211
           N          GF S+A +ANRNA  +SSSS IFGADQY +NGLDLSLKL
Sbjct: 181 N----------GFASMA-MANRNASSSSSSSQIFGADQYIVNGLDLSLKL 219

[Close]
BLAST of ClCG10G016320 vs. TrEMBL
Match: E5GBP2_CUCME (Zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.9e-67
Identity = 152/231 (65.80%), Postives = 170/231 (73.59%), Query Frame = 1 

Query: 1   MSSSDKSNASDDE-HYNQDSSEVPDSKPRHESKTKDQPRVFYCKFCSRKFSNLQALGGHQ 60
           MSSSDKSNASD E +YNQDS +    +P  E+K K++ RVFYCKFCSR FSNLQALGGHQ
Sbjct: 1   MSSSDKSNASDHERNYNQDSFK-ESEQPETEAKAKEETRVFYCKFCSRNFSNLQALGGHQ 60

Query: 61  NAHKRERDIAKREKAAAV------RSSDAFDSVGCFYHPYYSAMAIHSLRNKALGFPIRP 120
           NAHKRERDIAKREKAAA       R++D FDS+G FYHPYYS MAIHSLRNK+ GFPIRP
Sbjct: 61  NAHKRERDIAKREKAAAAAAAAGGRTTDVFDSIGSFYHPYYSVMAIHSLRNKSPGFPIRP 120

Query: 121 --TIRKPSQSRFEL----------GSAAAYGYRWWSTEQYMAA-AEQQQQQLRAGGLLQG 180
              IRKPS+SR EL           +AAAYGYRWW  EQYMAA A  QQQQ+++GGLLQG
Sbjct: 121 QSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWWPREQYMAALAAAQQQQIQSGGLLQG 180

Query: 181 VNNGTGRVDLAATGFESIAILANRNAASSSS-HIFGADQYSINGLDLSLKL 211
            NN          GFESIA + N NA+SSSS  IFGADQ  +NGLDLSLKL
Sbjct: 181 FNN----------GFESIA-MENINASSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]
BLAST of ClCG10G016320 vs. TrEMBL
Match: F6H3J5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05930 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.0e-19
Identity = 78/208 (37.50%), Postives = 103/208 (49.52%), Query Frame = 1 

Query: 16  NQDSSEVPDSKPRHESKTKDQPRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREK-- 75
           N DSS+     P+       +PRVF C +C RKF + QALGGHQNAHKRER +AKR +  
Sbjct: 86  NTDSSQTSSEIPQPADA---EPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRL 145

Query: 76  -AAAVRSSDAFDSVGCFYHPYYSAMA---IHSLRNKALGFPIRPTIRKPSQSRFELGSAA 135
            A  V ++ AF     F+H +YS+MA   +H   N++LG  +   I KPS +    GS  
Sbjct: 146 GAPMVAAATAFGH-PYFHHQHYSSMASLPLHGAYNRSLGIQVHSMIHKPSLTTPSSGSGN 205

Query: 136 AYGYRWWS---TEQYMA----AAEQQQQQLRAGGLLQGVNNGTGRVDLAATGFESIAILA 195
            YG+R WS    +Q  A    A E   + + AG L +G   G GR D       S A   
Sbjct: 206 LYGHRSWSRPPIDQQPAVGRLAVENCHEGVTAGPLSRG---GIGRFDTVRMMINSQANEG 265

Query: 196 NRNAASSSSHIFGADQYSINGLDLSLKL 211
                 +       +Q  +  LDLSLKL
Sbjct: 266 IGGFCWTGGGRLKTNQDELQKLDLSLKL 286

[Close]
BLAST of ClCG10G016320 vs. TrEMBL
Match: K4BLK9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.6e-18
Identity = 82/244 (33.61%), Postives = 110/244 (45.08%), Query Frame = 1 

Query: 1   MSSSDKSNASDDEHYNQD------------------SSEVPDSKPRHESKTKDQPRVFYC 60
           + SS+ +  S+DEH N D                  SS+   S   + + T+ +PRVF C
Sbjct: 3   VQSSNSNQISNDEHENNDLILDLRLDHGVKSNIQTSSSDASRSAGNNNNNTESEPRVFSC 62

Query: 61  KFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAVRSSDAFDSVGCFYHPYYSAMA---I 120
            +C RKF + QALGGHQNAHKRER IAKR +     S+ AF      Y   YS+MA   +
Sbjct: 63  NYCQRKFYSSQALGGHQNAHKRERTIAKRSQKI---SAAAFG-----YDNKYSSMASLPL 122

Query: 121 HSLRNKALGFPIRPTIRKPSQSRFELGSAAAYGYRWWSTEQYMAAAEQQQQQLRAGGLLQ 180
           H   N++LG  +   I KP+ S    G+ A YG+  WS  + +       +Q  A G L 
Sbjct: 123 HGSFNRSLGIQVHSMIHKPATST-AFGAPALYGHPGWSIRRPI-------EQQPAIGRLG 182

Query: 181 GVNNGTGRVDLAATGFESIAILANRNAASSSSHIFGADQY-------------SINGLDL 211
             +N T     AAT   + A   + N       I G  QY                 LDL
Sbjct: 183 TESNFTNNYQTAATSSGAAAARFD-NIIQKFPQIDGISQYRWDSGGGRTNKPDETKKLDL 229

[Close]
BLAST of ClCG10G016320 vs. TrEMBL
Match: M5X4Y3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024496mg PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-15
Identity = 72/230 (31.30%), Postives = 104/230 (45.22%), Query Frame = 1 

Query: 1   MSSSDKSNASDDEHYNQDSSEVPDSKPRHESKTKDQPRVFYCKFCSRKFSNLQALGGHQN 60
           + SS+  +++    Y+Q + E  D  PR     + QPRVF C FC R+FS  QALGGHQN
Sbjct: 108 LGSSNPGSSNPVSEYSQPN-ETTDENPRGSDDKRSQPRVFTCNFCKREFSTSQALGGHQN 167

Query: 61  AHKRERDIAKREKAAAVRSSDAF-DSVGCFYHPY--YSAMAIHSLRNKALGFPIRPTIRK 120
           AHK+ER +AKR +            S   +Y+PY   S+ +++   N++LG  +   I K
Sbjct: 168 AHKQERALAKRRQGGLENMGGVLGHSPFPYYNPYSSLSSPSLYGSFNRSLGVRMDSMIHK 227

Query: 121 PS---QSRFELGSAAAYGYRWWSTEQYMAAAEQQQQQLRAGGLLQGVNNGTGRV--DLAA 180
           PS    S    G        W S    +   +    +L   GL     NG   +    +A
Sbjct: 228 PSYPWSSTLGFGRFGPSSEAWSSRAGSLLNFQSTIDRLNLDGLHANAPNGISGLPGTSSA 287

Query: 181 TGFE-SIAILANRNAASSSSHIF-----------GADQYSINGLDLSLKL 211
           + F+  I ++ N   +SS+S I                    GLDLSLKL
Sbjct: 288 SRFDKEIGVVGNFGGSSSNSEINRPILGDLPREPPTSDTDAAGLDLSLKL 336

[Close]
BLAST of ClCG10G016320 vs. TAIR10
Match: AT1G80730.1 (AT1G80730.1 zinc-finger protein 1)

HSP 1 Score: 72.4 bits (176), Expect = 3.7e-13
Identity = 49/125 (39.20%), Postives = 61/125 (48.80%), Query Frame = 1 

Query: 6   KSNASDDEHYNQDSSEVPDSKPRHESKTKDQ---PRVFYCKFCSRKFSNLQALGGHQNAH 65
           +  A+  E    DS +   S   H    ++Q   PRVF C +C RKF + QALGGHQNAH
Sbjct: 31  RGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAH 90

Query: 66  KRERDIAKREKAAAVRSSDAFDSVGCFYHPYYSAMA------IH-SLRNKA-LGFPIRPT 120
           KRER +AKR +   +  S    S   F H   S  A      +H S+ N++ LG     T
Sbjct: 91  KRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHST 150

[Close]
BLAST of ClCG10G016320 vs. TAIR10
Match: AT5G10970.1 (AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-11
Identity = 42/113 (37.17%), Postives = 51/113 (45.13%), Query Frame = 1 

Query: 27  PRHESKTKDQPRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAVRSSDAFDSV 86
           P     T  + ++F C +C R F + QALGGHQNAHKRER +AKR +  A        S 
Sbjct: 91  PSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMA--------SA 150

Query: 87  GCFYHPY-YSAMAIH-SLRNKALGFPIRPTIRKPSQSRFELGSAAAYGYRWWS 138
             F HPY ++ +  H    N+ LG        KPS      G    YG   WS
Sbjct: 151 AAFGHPYGFAPVPFHGQYSNRTLGIQAHSMSHKPSSYNVYGGE---YGQINWS 192

[Close]
BLAST of ClCG10G016320 vs. TAIR10
Match: AT5G25160.1 (AT5G25160.1 zinc finger protein 3)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-11
Identity = 43/112 (38.39%), Postives = 53/112 (47.32%), Query Frame = 1 

Query: 29  HESKTKDQPRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAVRSSDAFDSVGC 88
           +ES T  + ++F C +C R F + QALGGHQNAHKRER +AKR +  A        S   
Sbjct: 50  NESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAA-------SASA 109

Query: 89  FYHPY-YSAMAIHSLRN--KALGFPIRPTIRKPSQSRFELGSAAAYGYRWWS 138
           F HPY +S +  H   N  ++LG        K S      G    YG   WS
Sbjct: 110 FGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLSSYN---GFGGHYGQINWS 151

[Close]
BLAST of ClCG10G016320 vs. TAIR10
Match: AT5G48890.1 (AT5G48890.1 C2H2-like zinc finger protein)

HSP 1 Score: 65.1 bits (157), Expect = 6.0e-11
Identity = 43/111 (38.74%), Postives = 60/111 (54.05%), Query Frame = 1 

Query: 12  DEHYNQDSSEVPDS-KPRHESKTKDQP----RVFYCKFCSRKFSNLQALGGHQNAHKRER 71
           ++HY+Q   E  +  KP  E+   D+     R+F C FCSRKF + QALGGHQNAHK+ER
Sbjct: 2   EDHYHQVEVEGEEEIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKER 61

Query: 72  DIAKREKAA--AVRSSDAFDSVGCFYHPYYSAMAIHSLRNKALGFPIRPTI 116
             A+R K A   V ++D   ++  F     S+ + H L    LG+P   ++
Sbjct: 62  TAARRAKRAYDFVNNNDFLHTLPVF----LSSPSQHHL--TILGYPASASV 106

[Close]
BLAST of ClCG10G016320 vs. TAIR10
Match: AT5G57520.1 (AT5G57520.1 zinc finger protein 2)

HSP 1 Score: 64.7 bits (156), Expect = 7.8e-11
Identity = 32/61 (52.46%), Postives = 38/61 (62.30%), Query Frame = 1 

Query: 25 SKPRHESKTKDQPRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAVRSSDAFD 84
          S   + S   +QPRVF C +C RKF + QALGGHQNAHK ER +AK+ +    RSS+  D
Sbjct: 37 SSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSR-ELFRSSNTVD 96

Query: 85 S 86
          S
Sbjct: 97 S 96

[Close]
BLAST of ClCG10G016320 vs. NCBI nr
Match: gi|449437708|ref|XP_004136633.1| (PREDICTED: zinc finger protein 1-like [Cucumis sativus])

HSP 1 Score: 279.3 bits (713), Expect = 5.7e-72
Identity = 159/230 (69.13%), Postives = 178/230 (77.39%), Query Frame = 1 

Query: 1   MSSSDKSNASDDEHYNQD--SSEVPDSK----PRHESKTKDQPRVFYCKFCSRKFSNLQA 60
           MSSSDK   SDDEH NQD  SS+VP+S+    P  E+KTKD+ RVFYCKFCSRKFSNLQA
Sbjct: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60

Query: 61  LGGHQNAHKRERDIAKREKAAAV------RSSDAFDSVGCFYHPYYSAMAIHSLRNKALG 120
           LGGHQNAHKRERDIAKREKAAA       R++DAFDS+G FYHPYYSAMAIH LRNK+ G
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120

Query: 121 FPIRP--TIRKPSQSRFELG---SAAAYGYRWWSTEQYMAAA-EQQQQQLRAGGLLQGVN 180
            PIRP   IRKPS+SR ELG   +AAAYGYRWW  EQY+AAA   QQQQ+++GGLLQGVN
Sbjct: 121 IPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVN 180

Query: 181 NGTGRVDLAATGFESIAILANRNA--ASSSSHIFGADQYSINGLDLSLKL 211
           N          GF S+A +ANRNA  +SSSS IFGADQY +NGLDLSLKL
Sbjct: 181 N----------GFASMA-MANRNASSSSSSSQIFGADQYIVNGLDLSLKL 219

[Close]
BLAST of ClCG10G016320 vs. NCBI nr
Match: gi|659085798|ref|XP_008443609.1| (PREDICTED: uncharacterized protein LOC103487164 [Cucumis melo])

HSP 1 Score: 263.1 bits (671), Expect = 4.2e-67
Identity = 152/231 (65.80%), Postives = 170/231 (73.59%), Query Frame = 1 

Query: 1   MSSSDKSNASDDE-HYNQDSSEVPDSKPRHESKTKDQPRVFYCKFCSRKFSNLQALGGHQ 60
           MSSSDKSNASD E +YNQDS +    +P  E+K K++ RVFYCKFCSR FSNLQALGGHQ
Sbjct: 1   MSSSDKSNASDHERNYNQDSFK-ESEQPETEAKAKEETRVFYCKFCSRNFSNLQALGGHQ 60

Query: 61  NAHKRERDIAKREKAAAV------RSSDAFDSVGCFYHPYYSAMAIHSLRNKALGFPIRP 120
           NAHKRERDIAKREKAAA       R++D FDS+G FYHPYYS MAIHSLRNK+ GFPIRP
Sbjct: 61  NAHKRERDIAKREKAAAAAAAAGGRTTDVFDSIGSFYHPYYSVMAIHSLRNKSPGFPIRP 120

Query: 121 --TIRKPSQSRFEL----------GSAAAYGYRWWSTEQYMAA-AEQQQQQLRAGGLLQG 180
              IRKPS+SR EL           +AAAYGYRWW  EQYMAA A  QQQQ+++GGLLQG
Sbjct: 121 QSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWWPREQYMAALAAAQQQQIQSGGLLQG 180

Query: 181 VNNGTGRVDLAATGFESIAILANRNAASSSS-HIFGADQYSINGLDLSLKL 211
            NN          GFESIA + N NA+SSSS  IFGADQ  +NGLDLSLKL
Sbjct: 181 FNN----------GFESIA-MENINASSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]
BLAST of ClCG10G016320 vs. NCBI nr
Match: gi|296082081|emb|CBI21086.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 103.6 bits (257), Expect = 4.3e-19
Identity = 78/208 (37.50%), Postives = 103/208 (49.52%), Query Frame = 1 

Query: 16  NQDSSEVPDSKPRHESKTKDQPRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREK-- 75
           N DSS+     P+       +PRVF C +C RKF + QALGGHQNAHKRER +AKR +  
Sbjct: 52  NTDSSQTSSEIPQPADA---EPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRL 111

Query: 76  -AAAVRSSDAFDSVGCFYHPYYSAMA---IHSLRNKALGFPIRPTIRKPSQSRFELGSAA 135
            A  V ++ AF     F+H +YS+MA   +H   N++LG  +   I KPS +    GS  
Sbjct: 112 GAPMVAAATAFGH-PYFHHQHYSSMASLPLHGAYNRSLGIQVHSMIHKPSLTTPSSGSGN 171

Query: 136 AYGYRWWS---TEQYMA----AAEQQQQQLRAGGLLQGVNNGTGRVDLAATGFESIAILA 195
            YG+R WS    +Q  A    A E   + + AG L +G   G GR D       S A   
Sbjct: 172 LYGHRSWSRPPIDQQPAVGRLAVENCHEGVTAGPLSRG---GIGRFDTVRMMINSQANEG 231

Query: 196 NRNAASSSSHIFGADQYSINGLDLSLKL 211
                 +       +Q  +  LDLSLKL
Sbjct: 232 IGGFCWTGGGRLKTNQDELQKLDLSLKL 252

[Close]
BLAST of ClCG10G016320 vs. NCBI nr
Match: gi|225430380|ref|XP_002282938.1| (PREDICTED: zinc finger protein 3-like [Vitis vinifera])

HSP 1 Score: 103.6 bits (257), Expect = 4.3e-19
Identity = 78/208 (37.50%), Postives = 103/208 (49.52%), Query Frame = 1 

Query: 16  NQDSSEVPDSKPRHESKTKDQPRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREK-- 75
           N DSS+     P+       +PRVF C +C RKF + QALGGHQNAHKRER +AKR +  
Sbjct: 86  NTDSSQTSSEIPQPADA---EPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRL 145

Query: 76  -AAAVRSSDAFDSVGCFYHPYYSAMA---IHSLRNKALGFPIRPTIRKPSQSRFELGSAA 135
            A  V ++ AF     F+H +YS+MA   +H   N++LG  +   I KPS +    GS  
Sbjct: 146 GAPMVAAATAFGH-PYFHHQHYSSMASLPLHGAYNRSLGIQVHSMIHKPSLTTPSSGSGN 205

Query: 136 AYGYRWWS---TEQYMA----AAEQQQQQLRAGGLLQGVNNGTGRVDLAATGFESIAILA 195
            YG+R WS    +Q  A    A E   + + AG L +G   G GR D       S A   
Sbjct: 206 LYGHRSWSRPPIDQQPAVGRLAVENCHEGVTAGPLSRG---GIGRFDTVRMMINSQANEG 265

Query: 196 NRNAASSSSHIFGADQYSINGLDLSLKL 211
                 +       +Q  +  LDLSLKL
Sbjct: 266 IGGFCWTGGGRLKTNQDELQKLDLSLKL 286

[Close]
BLAST of ClCG10G016320 vs. NCBI nr
Match: gi|460380371|ref|XP_004235930.1| (PREDICTED: zinc finger protein 3 [Solanum lycopersicum])

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-17
Identity = 82/244 (33.61%), Postives = 110/244 (45.08%), Query Frame = 1 

Query: 1   MSSSDKSNASDDEHYNQD------------------SSEVPDSKPRHESKTKDQPRVFYC 60
           + SS+ +  S+DEH N D                  SS+   S   + + T+ +PRVF C
Sbjct: 3   VQSSNSNQISNDEHENNDLILDLRLDHGVKSNIQTSSSDASRSAGNNNNNTESEPRVFSC 62

Query: 61  KFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAVRSSDAFDSVGCFYHPYYSAMA---I 120
            +C RKF + QALGGHQNAHKRER IAKR +     S+ AF      Y   YS+MA   +
Sbjct: 63  NYCQRKFYSSQALGGHQNAHKRERTIAKRSQKI---SAAAFG-----YDNKYSSMASLPL 122

Query: 121 HSLRNKALGFPIRPTIRKPSQSRFELGSAAAYGYRWWSTEQYMAAAEQQQQQLRAGGLLQ 180
           H   N++LG  +   I KP+ S    G+ A YG+  WS  + +       +Q  A G L 
Sbjct: 123 HGSFNRSLGIQVHSMIHKPATST-AFGAPALYGHPGWSIRRPI-------EQQPAIGRLG 182

Query: 181 GVNNGTGRVDLAATGFESIAILANRNAASSSSHIFGADQY-------------SINGLDL 211
             +N T     AAT   + A   + N       I G  QY                 LDL
Sbjct: 183 TESNFTNNYQTAATSSGAAAARFD-NIIQKFPQIDGISQYRWDSGGGRTNKPDETKKLDL 229

The following BLAST results are available for this feature:
BLAST of ClCG10G016320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZFP1_ARATH6.6e-1239.20Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1[more]
ZFP3_ARATH2.1e-1038.39Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1[more]
LATE_ARATH1.1e-0938.74Protein LATE FLOWERING OS=Arabidopsis thaliana GN=LATE PE=2 SV=1[more]
ZFP2_ARATH1.4e-0952.46Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1[more]
ZFP6_ARATH4.0e-0941.89Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1[more]
BLAST of ClCG10G016320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBM7_CUCSA4.0e-7269.13Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819820 PE=4 SV=1[more]
E5GBP2_CUCME2.9e-6765.80Zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
F6H3J5_VITVI3.0e-1937.50Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05930 PE=4 SV=... [more]
K4BLK9_SOLLC9.6e-1833.61Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
M5X4Y3_PRUPE1.5e-1531.30Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024496mg PE=4 SV=1[more]
BLAST of ClCG10G016320 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80730.13.7e-1339.20 zinc-finger protein 1[more]
AT5G10970.11.2e-1137.17 C2H2 and C2HC zinc fingers superfamily protein[more]
AT5G25160.11.2e-1138.39 zinc finger protein 3[more]
AT5G48890.16.0e-1138.74 C2H2-like zinc finger protein[more]
AT5G57520.17.8e-1152.46 zinc finger protein 2[more]
BLAST of ClCG10G016320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437708|ref|XP_004136633.1|5.7e-7269.13PREDICTED: zinc finger protein 1-like [Cucumis sativus][more]
gi|659085798|ref|XP_008443609.1|4.2e-6765.80PREDICTED: uncharacterized protein LOC103487164 [Cucumis melo][more]
gi|296082081|emb|CBI21086.3|4.3e-1937.50unnamed protein product [Vitis vinifera][more]
gi|225430380|ref|XP_002282938.1|4.3e-1937.50PREDICTED: zinc finger protein 3-like [Vitis vinifera][more]
gi|460380371|ref|XP_004235930.1|1.4e-1733.61PREDICTED: zinc finger protein 3 [Solanum lycopersicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG10G016320.1ClCG10G016320.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 42..62
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 40..67
score: 11
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 38..67
score: 4.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG10G016320Csa3G819820Cucumber (Chinese Long) v2cuwcgB194
ClCG10G016320MELO3C009744Melon (DHL92) v3.5.1mewcgB315
ClCG10G016320Cla017429Watermelon (97103) v1wcgwmB051
ClCG10G016320Cla97C10G199240Watermelon (97103) v2wcgwmbB038
ClCG10G016320Bhi11G002330Wax gourdwcgwgoB083
ClCG10G016320CSPI03G37660Wild cucumber (PI 183967)cpiwcgB195
ClCG10G016320Cucsa.337640Cucumber (Gy14) v1cgywcgB579
ClCG10G016320CmaCh14G005030Cucurbita maxima (Rimu)cmawcgB222
ClCG10G016320CmoCh14G005080Cucurbita moschata (Rifu)cmowcgB207
ClCG10G016320Lsi03G016240Bottle gourd (USVL1VR-Ls)lsiwcgB219
ClCG10G016320MELO3C009744.2Melon (DHL92) v3.6.1medwcgB309
ClCG10G016320Carg03493Silver-seed gourdcarwcgB0240
ClCG10G016320CsaV3_3G040020Cucumber (Chinese Long) v3cucwcgB199
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG10G016320Wax gourdwcgwgoB125
ClCG10G016320Cucurbita maxima (Rimu)cmawcgB573
ClCG10G016320Cucurbita maxima (Rimu)cmawcgB720
ClCG10G016320Cucurbita maxima (Rimu)cmawcgB731
ClCG10G016320Cucurbita moschata (Rifu)cmowcgB723
ClCG10G016320Cucurbita moschata (Rifu)cmowcgB735
ClCG10G016320Cucurbita pepo (Zucchini)cpewcgB546
ClCG10G016320Cucurbita pepo (Zucchini)cpewcgB767
ClCG10G016320Cucurbita pepo (Zucchini)cpewcgB776
ClCG10G016320Bottle gourd (USVL1VR-Ls)lsiwcgB121
ClCG10G016320Cucumber (Gy14) v2cgybwcgB179
ClCG10G016320Silver-seed gourdcarwcgB0149
ClCG10G016320Silver-seed gourdcarwcgB0150