Cucsa.334730 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.334730
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionATP-dependent DNA helicase RecQ
Locationscaffold03312 : 200204 .. 202017 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACGACGACCCTTGGCTCCAGCAAAGTTTGAAGCTTGGAAAATGTGGCATGAAGATGGTCTTTCAATACAGAAAATTGCTGTAAGTATTTTGTTTTTTTGACTTTTTGAAGTTATTGAGAGAAAAAGGCTTATGAAGATGAACATAACAGAATGGCAATTTAGAAGCTTATTCACATGGAACTTCACCCTTGTATATAAATAAGTCTGAAAAAAAACACTTTGAATCAGTTTAGACTGCAAATATTTCAACTCTGGAATGCTCAGAATTTAAATACTTTTCACCTGAAAGAAGTTTACTTGCTGAAAAAACAAACTTCTTGAGTTGTTTTGGCTTTTCAGAGTTACGGTCTTTTTTTTAGAAGCACAGTGTGTTTAGAATTTTTGAAATCACATCTGTTTATTGTAAATCAAACACCATATGACTTTTGAACAATGCTTTTAATTGGAAATGAAATGCACTTTTTACCATTCTAGAAATTATATTAGCCTCGCCCTTACCATGTTCAGTGCATGTCTGGAGTGATATTGAAATTGCTAAAATCACTATTAGCATGTTCAAAATCAATATGAAACTCGCCTTGAAGCATGATAAATCGATTTATTGTTTAATTCTACACTCTTGAATTCAATCTTTTATATTATCAAAACTGATTTGAATGATTAAAAGAACATGTTTTAGAGTGAGTTTGAAAATAACAATGATTTTAACCAATTTAAAATCACTCATTTTATGTTAAACGTTGGCAGATATTTCTCTTTTCCCATTAATTGGCCTTATTCTGATATATCATTATTTATTTTGAAAATAGAACTTCCCTGGTAGATTGGCACCTATCAAAGAAACTACTGTTTTTGGGTATATTGTTGATGCAGTCCAGGAAGGATATGAAATCGACTGGACCAAGTTTTGTGATGAGATAGGACTTACATGTCAGATATTCTCCGACATTCAATCTGCTGTCACAAAGGTTGGATCTGCTGAGAAGTTGAAGGCGATAAAAGATGAATTACCAGAAGAAGTAAGTTGGATATTGTAAAATATGCCTTCTGTTTCTTAGACTTTAGTCCTCCATTGTTTCTTTTATGCATATACTTTTCAGTTTTTCAGTCTAATGCTCCATCGTCTGTATATGACTGGAAATTGATATTTGGATGACAGATAAATTATGCTCACATCAAGGCTTGTCTGGTAATGCAAAGTCGTGGAATGTCCCCGGAAGGCCTGGATAGAAAAACCGACGAACCAATGACTGGTGCATCAGTGCTTTCAGGGAGTCCAACTTCGATTCAGAAGAAAGAAGAGCCTTGTGTAATTGAAACACCATCAAATGGAGAAGAGGAAATTTCCGTTTCGTTAAAGCGCCAGAAAGTTTGTGAATTGGAGGAAGAACATCGGGTTCCGATAAAAGCAACCGAGAGCTTGCTAGTAGAGTGGCTGAAGAACAATGATGGGGTAAGTGAAATGAAGTCTGAAATATGTATCATTTTTTGCTTCTTATACTAATCTTTCCAAGCGCTCTTTGAAGTTCACCATAGTATGGTTTAAATGAAGAAGAATGCAATATGGCTTTTTGATAATGCAGGTAACACTTGACAATATGATGAAGCAGTTTAAACTTAAAGGATGTGAAGAAGAATCTCTAGTTGCTTTGCTTAATTCCCTTGAAGGCGATTTTGTGATATATAAAAAGAACAATATCTATAAGCTCATGTAAGCTCTAAAGCGTAACTATAAAACTCCCTAATTTTGTGTATAGGAATTTGGGAATAGGATTAAACCAAATCCAAGGTATTGGCGCATTCATTTGCCAGC

mRNA sequence

AACGACGACCCTTGGCTCCAGCAAAGTTTGAAGCTTGGAAAATGTGGCATGAAGATGGTCTTTCAATACAGAAAATTGCTAACTTCCCTGGTAGATTGGCACCTATCAAAGAAACTACTGTTTTTGGGTATATTGTTGATGCAGTCCAGGAAGGATATGAAATCGACTGGACCAAGTTTTGTGATGAGATAGGACTTACATGTCAGATATTCTCCGACATTCAATCTGCTGTCACAAAGGTTGGATCTGCTGAGAAGTTGAAGGCGATAAAAGATGAATTACCAGAAGAAATAAATTATGCTCACATCAAGGCTTGTCTGGTAATGCAAAGTCGTGGAATGTCCCCGGAAGGCCTGGATAGAAAAACCGACGAACCAATGACTGGTGCATCAGTGCTTTCAGGGAGTCCAACTTCGATTCAGAAGAAAGAAGAGCCTTGTGTAATTGAAACACCATCAAATGGAGAAGAGGAAATTTCCGTTTCGTTAAAGCGCCAGAAAGTTTGTGAATTGGAGGAAGAACATCGGGTTCCGATAAAAGCAACCGAGAGCTTGCTAGTAGAGTGGCTGAAGAACAATGATGGGGTAACACTTGACAATATGATGAAGCAGTTTAAACTTAAAGGATGTGAAGAAGAATCTCTAGTTGCTTTGCTTAATTCCCTTGAAGGCGATTTTGTGATATATAAAAAGAACAATATCTATAAGCTCATGTAAGCTCTAAAGCGTAACTATAAAACTCCCTAATTTTGTGTATAGGAATTTGGGAATAGGATTAAACCAAATCCAAGGTATTGGCGCATTCATTTGCCAGC

Coding sequence (CDS)

CGACGACCCTTGGCTCCAGCAAAGTTTGAAGCTTGGAAAATGTGGCATGAAGATGGTCTTTCAATACAGAAAATTGCTAACTTCCCTGGTAGATTGGCACCTATCAAAGAAACTACTGTTTTTGGGTATATTGTTGATGCAGTCCAGGAAGGATATGAAATCGACTGGACCAAGTTTTGTGATGAGATAGGACTTACATGTCAGATATTCTCCGACATTCAATCTGCTGTCACAAAGGTTGGATCTGCTGAGAAGTTGAAGGCGATAAAAGATGAATTACCAGAAGAAATAAATTATGCTCACATCAAGGCTTGTCTGGTAATGCAAAGTCGTGGAATGTCCCCGGAAGGCCTGGATAGAAAAACCGACGAACCAATGACTGGTGCATCAGTGCTTTCAGGGAGTCCAACTTCGATTCAGAAGAAAGAAGAGCCTTGTGTAATTGAAACACCATCAAATGGAGAAGAGGAAATTTCCGTTTCGTTAAAGCGCCAGAAAGTTTGTGAATTGGAGGAAGAACATCGGGTTCCGATAAAAGCAACCGAGAGCTTGCTAGTAGAGTGGCTGAAGAACAATGATGGGGTAACACTTGACAATATGATGAAGCAGTTTAAACTTAAAGGATGTGAAGAAGAATCTCTAGTTGCTTTGCTTAATTCCCTTGAAGGCGATTTTGTGATATATAAAAAGAACAATATCTATAAGCTCATGTAA

Protein sequence

RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGLDRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISVSLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNSLEGDFVIYKKNNIYKLM*
Homology
[Close]
BLAST of Cucsa.334730 vs. TrEMBL
Match: A0A0A0L1A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188732 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 3.0e-132
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 1 

Query: 1   RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFC 60
           RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFC
Sbjct: 421 RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFC 480

Query: 61  DEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGLDR 120
           DEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGLDR
Sbjct: 481 DEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGLDR 540

Query: 121 KTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISVSLKRQKVCELEEEHRVPIKA 180
           KTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISVSLKRQKVCELEEEHRVPIKA
Sbjct: 541 KTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISVSLKRQKVCELEEEHRVPIKA 600

Query: 181 TESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNSLEGDFVIYKKNNIYKLM 238
           TESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNSLEGDFVIYKKNNIYKLM
Sbjct: 601 TESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNSLEGDFVIYKKNNIYKLM 657

[Close]
BLAST of Cucsa.334730 vs. TrEMBL
Match: M5W6N4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001081mg PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.0e-59
Identity = 131/269 (48.70%), Postives = 166/269 (61.71%), Query Frame = 1 

Query: 2   RPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFCD 61
           + L PAKFEAWKMWHE+GLSI+KIANFPGR APIKE TV  Y++DA QEG EIDW + CD
Sbjct: 648 KKLTPAKFEAWKMWHEEGLSIRKIANFPGRPAPIKELTVHEYLMDAAQEGCEIDWIRLCD 707

Query: 62  EIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMS----PEG 121
           E+GLT ++FSDIQ A++KVGS+EKLK IK+ELPE+I+Y HIK CL MQ  G+S    P  
Sbjct: 708 EVGLTRKVFSDIQCAISKVGSSEKLKPIKEELPEDISYGHIKTCLAMQKYGISLDVIPSN 767

Query: 122 LDRKTDEPMTGASVLSGSPTSIQKK--EEPCVIETP--------SNGEEEISVSL----- 181
           L                SP S +    E PC  ET            EE  SV L     
Sbjct: 768 LHNAQKAGQLSNKETESSPCSTRTSPIEGPCEAETLVQNSVATLGENEETASVPLTWGQT 827

Query: 182 --------------KRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKG 238
                         KRQK+   ++ + + +KATES L  WLKN DGVTL  +++ F   G
Sbjct: 828 VKLPKVHFEDALSKKRQKLSSPDDGNSIALKATESSLFNWLKNKDGVTLAEILEHF--NG 887

[Close]
BLAST of Cucsa.334730 vs. TrEMBL
Match: W9QXN0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022687 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.1e-57
Identity = 128/256 (50.00%), Postives = 170/256 (66.41%), Query Frame = 1 

Query: 1   RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFC 60
           +R L PAKF+AWKMWHEDGLSIQKIANFPGR APIKE TV  YI++A QEG+ +DWT+ C
Sbjct: 91  QRKLTPAKFDAWKMWHEDGLSIQKIANFPGRSAPIKEQTVIEYILEAAQEGFAMDWTRLC 150

Query: 61  DEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGL-- 120
           +EIGLT ++F DIQ+A+ KVGS EKLK IK+ELPE+I+Y  IK  L +Q+RG+S E +  
Sbjct: 151 NEIGLTHEMFLDIQTAILKVGSREKLKPIKNELPEDISYTQIKVYLTIQNRGISAESILS 210

Query: 121 DRKTDEPMTGASVLSGSPTSIQK-KEEPC---------------VIETPSNGEEEISVSL 180
           D   +E +  A        SI   KE PC               + E  S    E  ++ 
Sbjct: 211 DPNAEERVNKAQ--DSQQDSINACKETPCESKNANHLAGFQLENIEEIDSVLSAEDLLAN 270

Query: 181 KRQKVCELEEEHRVPIKATESLLVEWLKN-NDGVTLDNMMKQFKLKGCEEESLVALLNSL 238
           KRQ++ E  EE  VP+KATES ++ WLKN N+GVTL ++++ F   G  EE +  L++SL
Sbjct: 271 KRQRLTEPMEESSVPLKATESSVLSWLKNCNEGVTLSDIVEHF--SGSSEEFITDLVDSL 330

[Close]
BLAST of Cucsa.334730 vs. TrEMBL
Match: B9SK67_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1027520 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.8e-55
Identity = 123/247 (49.80%), Postives = 169/247 (68.42%), Query Frame = 1 

Query: 1   RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFC 60
           ++ L+PAKFEAWKMWHEDGLSI KIAN P R APIK  TV  Y++DA QEG E DW +FC
Sbjct: 555 QKTLSPAKFEAWKMWHEDGLSIHKIANLPSRQAPIKVETVCEYLLDAAQEGLEFDWIRFC 614

Query: 61  DEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEG--- 120
            EIGLT +IFSDIQ A+ KVGS EKLK IK+ELPE+++YAHIK  L MQ+ GMS EG   
Sbjct: 615 SEIGLTGEIFSDIQGAIIKVGSREKLKPIKNELPEDVSYAHIKTFLAMQTSGMSLEGMQP 674

Query: 121 --LDRKTDEPMTGA----SVLSGSPTSIQKKEEPCVIETPSNGEEEISVSLKRQKVCELE 180
             L    D+P+       SV   S T++ +++E   ++     +E++    KRQK   + 
Sbjct: 675 SHLSPSKDDPVQNKVPANSVEIASLTTVTERKE---LKPDPIHDEDLCSPEKRQKTI-IT 734

Query: 181 EEHRVPIKATESLLVEWLKNND-GVTLDNMMKQFKLKGCEEESLVALLNSLEGDFVIYKK 238
           +     ++ATE+ +++ LKN D GV+L +++K F  KG  E+S++ LL+SLE DF+I+KK
Sbjct: 735 DGSSTALEATETSILDLLKNYDEGVSLSDILKHF--KGSREDSVIDLLSSLEADFMIFKK 794

[Close]
BLAST of Cucsa.334730 vs. TrEMBL
Match: A0A067LLL8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17267 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.7e-53
Identity = 117/243 (48.15%), Postives = 165/243 (67.90%), Query Frame = 1 

Query: 1   RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFC 60
           +R L  AK+EAWKMWHEDGLS+ K+ANFP R APIKE TV  Y+++A +EG+EIDW +FC
Sbjct: 10  QRKLPSAKYEAWKMWHEDGLSMDKVANFPARSAPIKEQTVCEYLLEAAKEGFEIDWPRFC 69

Query: 61  DEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGLDR 120
           DEIGLT QIF  IQ A+TKVGS +KLK IK+ELPE+I+Y  IK CL+MQ+ G+S E +  
Sbjct: 70  DEIGLTRQIFLVIQGAITKVGSTDKLKPIKNELPEDISYMQIKTCLLMQNCGISLE-VAL 129

Query: 121 KTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGE-----EEISVSLKRQKVCELEEEHR 180
            +D  ++ AS L    T    K  P         E     +++ +  KRQK+    E   
Sbjct: 130 PSDPSISKASELENKVTDSSTKTAPLAFTMTQEQEVPPINDDLQLPEKRQKL-NTTEGSS 189

Query: 181 VPIKATESLLVEWL-KNNDGVTLDNMMKQFKLKGCEEESLVALLNSLEGDFVIYKKNNIY 238
           V ++ATE+ ++ WL K N+GV+L ++++ F   G ++ES++ L+ SLE DF+I+KKNN+Y
Sbjct: 190 VALEATENSILNWLEKLNEGVSLSDILEHF--NGSKKESVIDLVASLECDFLIFKKNNLY 248

[Close]
BLAST of Cucsa.334730 vs. NCBI nr
Match: gi|778692430|ref|XP_011653463.1| (PREDICTED: ATP-dependent DNA helicase Q-like SIM [Cucumis sativus])

HSP 1 Score: 479.2 bits (1232), Expect = 4.3e-132
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 1 

Query: 1   RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFC 60
           RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFC
Sbjct: 645 RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFC 704

Query: 61  DEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGLDR 120
           DEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGLDR
Sbjct: 705 DEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGLDR 764

Query: 121 KTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISVSLKRQKVCELEEEHRVPIKA 180
           KTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISVSLKRQKVCELEEEHRVPIKA
Sbjct: 765 KTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISVSLKRQKVCELEEEHRVPIKA 824

Query: 181 TESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNSLEGDFVIYKKNNIYKLM 238
           TESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNSLEGDFVIYKKNNIYKLM
Sbjct: 825 TESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNSLEGDFVIYKKNNIYKLM 881

[Close]
BLAST of Cucsa.334730 vs. NCBI nr
Match: gi|700198758|gb|KGN53916.1| (hypothetical protein Csa_4G188732 [Cucumis sativus])

HSP 1 Score: 479.2 bits (1232), Expect = 4.3e-132
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 1 

Query: 1   RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFC 60
           RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFC
Sbjct: 421 RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFC 480

Query: 61  DEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGLDR 120
           DEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGLDR
Sbjct: 481 DEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGLDR 540

Query: 121 KTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISVSLKRQKVCELEEEHRVPIKA 180
           KTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISVSLKRQKVCELEEEHRVPIKA
Sbjct: 541 KTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISVSLKRQKVCELEEEHRVPIKA 600

Query: 181 TESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNSLEGDFVIYKKNNIYKLM 238
           TESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNSLEGDFVIYKKNNIYKLM
Sbjct: 601 TESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNSLEGDFVIYKKNNIYKLM 657

[Close]
BLAST of Cucsa.334730 vs. NCBI nr
Match: gi|659082754|ref|XP_008442015.1| (PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X1 [Cucumis melo])

HSP 1 Score: 434.1 bits (1115), Expect = 1.6e-118
Identity = 218/237 (91.98%), Postives = 227/237 (95.78%), Query Frame = 1 

Query: 1   RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFC 60
           RRPLAPAKFEAWKMWHEDGLSIQKIANFPGR APIKETTV GYIVDAVQEGYEIDWTKFC
Sbjct: 648 RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVCGYIVDAVQEGYEIDWTKFC 707

Query: 61  DEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGLDR 120
           +EIGLTC+IFS+IQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQS GMSPEGLDR
Sbjct: 708 NEIGLTCRIFSNIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSCGMSPEGLDR 767

Query: 121 KTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISVSLKRQKVCELEEEHRVPIKA 180
           KTDEPM GAS+LSGSPTSI+KKEEPCVIETPSNGEEEISVSLKRQKV E EEE +VP+KA
Sbjct: 768 KTDEPMIGASLLSGSPTSIKKKEEPCVIETPSNGEEEISVSLKRQKVRESEEERQVPVKA 827

Query: 181 TESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNSLEGDFVIYKKNNIYKLM 238
           TESLL+EWLKNNDGVTLDNMM+QF  KG EEESLVALLNSLEGDFVIYKKNNIYKLM
Sbjct: 828 TESLLIEWLKNNDGVTLDNMMEQF--KGSEEESLVALLNSLEGDFVIYKKNNIYKLM 882

[Close]
BLAST of Cucsa.334730 vs. NCBI nr
Match: gi|659082756|ref|XP_008442016.1| (PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X2 [Cucumis melo])

HSP 1 Score: 434.1 bits (1115), Expect = 1.6e-118
Identity = 218/237 (91.98%), Postives = 227/237 (95.78%), Query Frame = 1 

Query: 1   RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFC 60
           RRPLAPAKFEAWKMWHEDGLSIQKIANFPGR APIKETTV GYIVDAVQEGYEIDWTKFC
Sbjct: 524 RRPLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVCGYIVDAVQEGYEIDWTKFC 583

Query: 61  DEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGLDR 120
           +EIGLTC+IFS+IQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQS GMSPEGLDR
Sbjct: 584 NEIGLTCRIFSNIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSCGMSPEGLDR 643

Query: 121 KTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISVSLKRQKVCELEEEHRVPIKA 180
           KTDEPM GAS+LSGSPTSI+KKEEPCVIETPSNGEEEISVSLKRQKV E EEE +VP+KA
Sbjct: 644 KTDEPMIGASLLSGSPTSIKKKEEPCVIETPSNGEEEISVSLKRQKVRESEEERQVPVKA 703

Query: 181 TESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNSLEGDFVIYKKNNIYKLM 238
           TESLL+EWLKNNDGVTLDNMM+QF  KG EEESLVALLNSLEGDFVIYKKNNIYKLM
Sbjct: 704 TESLLIEWLKNNDGVTLDNMMEQF--KGSEEESLVALLNSLEGDFVIYKKNNIYKLM 758

[Close]
BLAST of Cucsa.334730 vs. NCBI nr
Match: gi|645215808|ref|XP_008218164.1| (PREDICTED: Werner syndrome ATP-dependent helicase-like [Prunus mume])

HSP 1 Score: 237.7 bits (605), Expect = 2.2e-59
Identity = 129/269 (47.96%), Postives = 169/269 (62.83%), Query Frame = 1 

Query: 2   RPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFCD 61
           + L PAKFEAWKMWHE+GLSI+KIANFPGR APIKE TV  Y++DA QEG EIDW + CD
Sbjct: 646 KKLTPAKFEAWKMWHEEGLSIRKIANFPGRPAPIKEQTVHEYLMDAAQEGCEIDWIRLCD 705

Query: 62  EIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGLDRK 121
           E+GLT ++FSDIQ A++KVGS+EKLK IK+ELPE+I+Y HIK CL MQ  G+S E +   
Sbjct: 706 EVGLTRKVFSDIQCAISKVGSSEKLKPIKEELPEDISYGHIKTCLAMQKYGISLEVIPSN 765

Query: 122 TDEPMTGASV------LSGSPTSIQKKEEPCVIET------PSNGEEEISVSL------- 181
             +      +      LS   T     E PC  ET       + GE E + S+       
Sbjct: 766 LHDAQKAGHLSNKETELSPCSTRTSPMEGPCEAETLVQNSVATLGENEETASVPFTWGQT 825

Query: 182 --------------KRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKG 238
                         KRQK+   ++ + + +KATES L  WLKN DGVTL  +++ F   G
Sbjct: 826 VKLPKVHFEDALSKKRQKLSSPDDGNSIALKATESSLFNWLKNKDGVTLAEILEHF--YG 885

The following BLAST results are available for this feature:
BLAST of Cucsa.334730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1A4_CUCSA3.0e-132100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188732 PE=4 SV=1[more]
M5W6N4_PRUPE2.0e-5948.70Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001081mg PE=4 SV=1[more]
W9QXN0_9ROSA3.1e-5750.00Uncharacterized protein OS=Morus notabilis GN=L484_022687 PE=4 SV=1[more]
B9SK67_RICCO3.8e-5549.80Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1027520 PE=4 SV=1[more]
A0A067LLL8_JATCU2.7e-5348.15Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17267 PE=4 SV=1[more]
BLAST of Cucsa.334730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778692430|ref|XP_011653463.1|4.3e-132100.00PREDICTED: ATP-dependent DNA helicase Q-like SIM [Cucumis sativus][more]
gi|700198758|gb|KGN53916.1|4.3e-132100.00hypothetical protein Csa_4G188732 [Cucumis sativus][more]
gi|659082754|ref|XP_008442015.1|1.6e-11891.98PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X1 [Cucumis me... [more]
gi|659082756|ref|XP_008442016.1|1.6e-11891.98PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X2 [Cucumis me... [more]
gi|645215808|ref|XP_008218164.1|2.2e-5947.96PREDICTED: Werner syndrome ATP-dependent helicase-like [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006310 DNA recombination
cellular_component GO:0005622 intracellular
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.334730.1Cucsa.334730.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 6..100
score: 7.3
NoneNo IPR availablePANTHERPTHR13710:SF87WERNER SYNDROME ATP-DEPENDENT HELICASEcoord: 6..100
score: 7.3