Cla012113 (gene) Watermelon (97103) v1

Overview
NameCla012113
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionATP-dependent DNA helicase RecQ (AHRD V1 *-** C3A6Z6_BACMY); contains Interpro domain(s) IPR002121 Helicase and RNase D C-terminal, HRDC
LocationChr4 : 16003447 .. 16007134 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGGTGAGAATGAAAATGACAGTGCATTAAGTGAAGCTGGGAAAATGGAGAATTTGGCTACTTTGAAGAGTGGGCTTTCAGAGGTTTGCATGTTAAATGCTAGTTTCCTATTCATGCATTGATTATGTATATTATTTTATCTGTTTCCTATTGTCAAAATGTTGAGTAATTTTCCAGAAATAGTTTAGTTGTGCATGAATTATGTTGAGTCACATGGTCTTGGTTATTAGAGGTGTTATATGGCAATAAATTATTTGTAATATTCATCGCTCCAATCAGCAAAAATGTTCTCTCCTGCTGATTGTCTTTGAACAAGTATATCGTGAGGCCTTTTTATTAACTCAGTAAATCAATATTGTCTTGCTATTCTTTTCATTTGTTTGTATATTGCAATTCTTGGCTTACTCTTCTATATTATCACTGGCTATATTTATGATGTTTGATCATATAATTAATTGTAAGACAAATTAGGTAAACCATTGCATTTCCTTCCTTGTTTTTACCTTTCTCAGTTTTGTTATATTTTGATCGTTCCATTTGTATTACTTGATTATTTCTACCCAGGCTGAGGAAAAACTTTTTCAAATGCTTTTGGAAGAGAGAATGAAGCTTGCTAGAACCGCTGGAACTGCCCCGTAGGTTCTGCAAATACTTTTAACCTGCTCATTATGAAAACTGTCATTTTACTCCAACTATCATGGATTTGTTTGTATGTATGTGGTTTATGTGGAAAACCTTTCTTGTCTTTTATCATGCAATATGATAGACCCTGAATCACTCAAGTGCACACAAGAAGAAAGGAAAGAAAGAGGGACCGAGTGATGTAAATACATGAGAATGAAGGGACCTAGTGATGTAAATACATAAGAATGAATTTATACATCTATATGTGTGTGGGCTATTGTTTGTGGGGCCCATGTAGTCCCGTTAGTTAGTTATGTTTGGGGAGGTTTCCGGGTGAGGAGGGGGAGGAAGGCATCTTTTTGCTATTTTGCTAAATTTTAGCTCACTTAGCATCAAGGAAGCACAAATATGAATATGAGACAGATACGACACGATATGGACTCGGCGACGTGTCATTTTTTTAAAATCTAGGACACTGTATGAAGAAGACACATTTATTAAAATATATATCATTTTTATACCAAAAGAAAATTGAAAGTAAATGGGTTGATGCATTTATATGCTTAAAATACTTAGTTTGATGTATTTCACCCTCAAAATTTATTATTGTTGACATATATGTCTTTTTTTTCTTTGAGTATAAGACACATATTTTTTTAGTCTACTCAATAAGTGTTCTATGCATGTCTAACATATCTGTTGCACTAATAAGTGTCTAATACGTGCCCAATAAGTGTTGGGGTGTCCGACCTGTGTTGGACATGGACATGCTAGCCAAACTAAAGTGTTCTTGTTTCTTAGCTTAGCATTGTAGGAGAGAAGGGAGCTCTTGAAACTCCCTTGGCATTTGCCAATCAGTAAATACACAATTTCGAGTCCTATCACAGTACTTCTTTTCTGCAGGTATGCCATATGTGGTGATCAAACAGTTAAAAGAATTGTATTGACTAGACCATCTACCAAGGCAAGATTGGCAAATATTGATGGTGTCAACCAGGTATATCCTTCACGAGTACACGACTAGATATTCTTAAATTTCTGTGGGGTTGAAACAAAGTCATTAACATTGTATTTATGTATGCTTGTTCAACATGGATTTCTTACTCGAATGTCAACACCTCATACATGTGCTAGTTTGCTATAAATTGCTCTTTGAATTTCAATGCATTTTTTTCAATATTTTGTATGGTCCATATTGCATCTAGACTCAGAGTTTGACTCCATTATCTTGCAAATTCAGGCCTTGAGCTATTAGATTTTAACTAGCGAAGTTGTGAGATTGTTATTTGCTCTGTCATGAATTGATTGTTTGAAATTCAGTAATGGACTTCAATAATGGTACAGCATCTGCTAAAAATGCACGGAGATCTAATTCTTCAAGCAGTCAAGCATCTATCACAAGAAGTCGGTCTTTCACTGGATGGCGAAAATAAAGAAGGAAATGCACAAGGCACTGCAACAAGAAAACTCTATACAGATTCCAACCAACGGCGGCAGTTGGCTCCAGCAAAGTTCGAAGCTTGGAAAATGTGGCATGAAGATGGTCTCTCAATACAGAAAATTGCTGTAAGTATTTTTTTCCTCCTCAAAGTTACTGAGGCCTCGTATGGTAACCATTTGGTTTTTGGTTTTTAATTTTTGAAAATTAAGCCTATGAACACTTCTACCACCTCTAAATTTCTTATTTTGTAATCTATTTTTTAACTATGTTTTCAAAAACCAAGTCAAATTTTGAAAACTAAAAAAGGGTAGTTTTAAAAACTTGTTTTTGTTTTTGGAATTTGGCTAAGATTTTAACTCTTGTACTTAAGAAAGATGGAAACCATTGTAAGAAAATGAGAGGAAATAGGCTTAATTTTCAACCCCAAAACCAAAAACGAAATAGTTACCAAACGGGACCTAAGGGAAAAAAGGCTTGTGAAGATGAATATGGCAGCATGCATAGCAATTTACAAGCTTATGCACACATTGAAATTCACCCATGAAAAAGTTGAAATTTACCCATGAAAAAGAACTTTGGATCAGTTTAGACCGTTGCAAACATAGAGTACAACTCTGGAATGTTCTCAATTTAGATACCTTTGACCTGAAAGAAGCTTACTTGATGAAAGAAACAAGCTTTTTGAGAGATTTTGGCTTTTCAGAGTTGTGTTTTTTTTAAAGAAGCATTTTATAGTGTTTTTAGAATTTTCGAAATCACGTTTGTTTGATTAAAAGCATGTTATAGAGTGAGTTTGAAAATAACAAAAGTGCTTTTAACGAGTTTAGAATCACTCATGTTACTATAAACATCTGTAGCTATTTCTTTTTTTCCACTAACTTCCATTATTCTGATATATCACTATTTATTTGGAAAATAGAACTTCCCTGGTAGATCAGCACCTATCAAAGAGACTACTGTTTCTGGGTATATTCTTGATGCAGTTCAGGAAGGATATGCAATTGACTGGACCAAATTTTGTGATGAGATTGGACTTACATGTCGGATATTTTCTGACGTTCAATCTGCCATTATGAAGGTCGGATCTTCTGAGAAGTTGAAGGCTATAAAAGATGAATTACCAGAGGAAGTGAGTTGGATATTGTAAAATATGCCTTCTGTTTCTTTGTTTTTGACAGTACAATACTTTAGTCCTCCACGCCTTCAAGTTCCTTGTTCCCTTTATGCCTACACTTATCGGTTTCTCGGTCGAATCTCCTTCGTCTGTATATGACTGGAAATTGATATTTGGATGGCAGATAAACTATGCACACATCAAGGCTTGTCTGGTGATGCAAAGCTGTGGAATATCCCCTGAAGGCCTCCTACCCAGCAGCCACCAGGATAAAAAAACCGACGAACGCATGAATGGTGCGTCGACGTTTTCAGGGAGTCCAACTTTGATACAGAAAGAAGAGCCATGCGTAATTGAAACACCATCAAATGGAGAAGAGGAAATTTCTGCCTCGCTAAAGCGCCAGAAAGTTTGTGAATCGAAGGACGAACGTCGAGTTCCAGTAAAAGCAACTGAGAGCTTGCTAGTAGAGTGGCTGAAGAACAATGATGGGGTAAGTGATTGA

mRNA sequence

ATGATTGGTGAGAATGAAAATGACAGTGCATTAAGTGAAGCTGGGAAAATGGAGAATTTGGCTACTTTGAAGAGTGGGCTTTCAGAGGCTGAGGAAAAACTTTTTCAAATGCTTTTGGAAGAGAGAATGAAGCTTGCTAGAACCGCTGGAACTGCCCCGTATGCCATATGTGGTGATCAAACAGTTAAAAGAATTGTATTGACTAGACCATCTACCAAGGCAAGATTGGCAAATATTGATGGTGTCAACCAGCATCTGCTAAAAATGCACGGAGATCTAATTCTTCAAGCAGTCAAGCATCTATCACAAGAAGTCGGTCTTTCACTGGATGGCGAAAATAAAGAAGGAAATGCACAAGGCACTGCAACAAGAAAACTCTATACAGATTCCAACCAACGGCGGCAGTTGGCTCCAGCAAAGTTCGAAGCTTGGAAAATGTGGCATGAAGATGGTCTCTCAATACAGAAAATTGCTAACTTCCCTGGTAGATCAGCACCTATCAAAGAGACTACTGTTTCTGGGTATATTCTTGATGCAGTTCAGGAAGGATATGCAATTGACTGGACCAAATTTTGTGATGAGATTGGACTTACATGTCGGATATTTTCTGACGTTCAATCTGCCATTATGAAGGTCGGATCTTCTGAGAAGTTGAAGGCTATAAAAGATGAATTACCAGAGGAATACAATACTTTAGTCCTCCACGCCTTCAAGTTCCTTGTTCCCTTTATGCCTACACTTATCGGTTTCTCGGTCGAATCTCCTTCGTCTGTATATGACTGGAAATTGATATTTGGATGGCAGATAAACTATGCACACATCAAGGCTTGTCTGGTGATGCAAAGCTGTGGAATATCCCCTGAAGGCCTCCTACCCAGCAGCCACCAGGATAAAAAAACCGACGAACGCATGAATGGTGCGTCGACGTTTTCAGGGAGTCCAACTTTGATACAGAAAGAAGAGCCATGCGTAATTGAAACACCATCAAATGGAGAAGAGGAAATTTCTGCCTCGCTAAAGCGCCAGAAAGTTTGTGAATCGAAGGACGAACGTCGAGTTCCAGTAAAAGCAACTGAGAGCTTGCTAGTAGAGTGGCTGAAGAACAATGATGGGGTAAGTGATTGA

Coding sequence (CDS)

ATGATTGGTGAGAATGAAAATGACAGTGCATTAAGTGAAGCTGGGAAAATGGAGAATTTGGCTACTTTGAAGAGTGGGCTTTCAGAGGCTGAGGAAAAACTTTTTCAAATGCTTTTGGAAGAGAGAATGAAGCTTGCTAGAACCGCTGGAACTGCCCCGTATGCCATATGTGGTGATCAAACAGTTAAAAGAATTGTATTGACTAGACCATCTACCAAGGCAAGATTGGCAAATATTGATGGTGTCAACCAGCATCTGCTAAAAATGCACGGAGATCTAATTCTTCAAGCAGTCAAGCATCTATCACAAGAAGTCGGTCTTTCACTGGATGGCGAAAATAAAGAAGGAAATGCACAAGGCACTGCAACAAGAAAACTCTATACAGATTCCAACCAACGGCGGCAGTTGGCTCCAGCAAAGTTCGAAGCTTGGAAAATGTGGCATGAAGATGGTCTCTCAATACAGAAAATTGCTAACTTCCCTGGTAGATCAGCACCTATCAAAGAGACTACTGTTTCTGGGTATATTCTTGATGCAGTTCAGGAAGGATATGCAATTGACTGGACCAAATTTTGTGATGAGATTGGACTTACATGTCGGATATTTTCTGACGTTCAATCTGCCATTATGAAGGTCGGATCTTCTGAGAAGTTGAAGGCTATAAAAGATGAATTACCAGAGGAATACAATACTTTAGTCCTCCACGCCTTCAAGTTCCTTGTTCCCTTTATGCCTACACTTATCGGTTTCTCGGTCGAATCTCCTTCGTCTGTATATGACTGGAAATTGATATTTGGATGGCAGATAAACTATGCACACATCAAGGCTTGTCTGGTGATGCAAAGCTGTGGAATATCCCCTGAAGGCCTCCTACCCAGCAGCCACCAGGATAAAAAAACCGACGAACGCATGAATGGTGCGTCGACGTTTTCAGGGAGTCCAACTTTGATACAGAAAGAAGAGCCATGCGTAATTGAAACACCATCAAATGGAGAAGAGGAAATTTCTGCCTCGCTAAAGCGCCAGAAAGTTTGTGAATCGAAGGACGAACGTCGAGTTCCAGTAAAAGCAACTGAGAGCTTGCTAGTAGAGTGGCTGAAGAACAATGATGGGGTAAGTGATTGA

Protein sequence

MIGENENDSALSEAGKMENLATLKSGLSEAEEKLFQMLLEERMKLARTAGTAPYAICGDQTVKRIVLTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGENKEGNAQGTATRKLYTDSNQRRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSGYILDAVQEGYAIDWTKFCDEIGLTCRIFSDVQSAIMKVGSSEKLKAIKDELPEEYNTLVLHAFKFLVPFMPTLIGFSVESPSSVYDWKLIFGWQINYAHIKACLVMQSCGISPEGLLPSSHQDKKTDERMNGASTFSGSPTLIQKEEPCVIETPSNGEEEISASLKRQKVCESKDERRVPVKATESLLVEWLKNNDGVSD
Homology
[Close]
BLAST of Cla012113 vs. TrEMBL
Match: A0A0A0L1A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188732 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 5.8e-82
Identity = 154/178 (86.52%), Postives = 163/178 (91.57%), Query Frame = 1 

Query: 54  YAICGDQTVKRIVLTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGE- 113
           YAICGDQTVKRI LTRPSTKARLANIDGVNQHLLKMHGDLIL+AVK LSQ+V LSLDGE 
Sbjct: 341 YAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGEY 400

Query: 114 NKEGNAQGTATRKLYTDSNQRRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTV 173
            +EGN QGT  RKLYT+ NQRR LAPAKFEAWKMWHEDGLSIQKIANFPGR APIKETTV
Sbjct: 401 REEGNGQGTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTV 460

Query: 174 SGYILDAVQEGYAIDWTKFCDEIGLTCRIFSDVQSAIMKVGSSEKLKAIKDELPEEYN 231
            GYI+DAVQEGY IDWTKFCDEIGLTC+IFSD+QSA+ KVGS+EKLKAIKDELPEE N
Sbjct: 461 FGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEIN 518

[Close]
BLAST of Cla012113 vs. TrEMBL
Match: A0A0A0L1A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188732 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.7e-63
Identity = 164/330 (49.70%), Postives = 188/330 (56.97%), Query Frame = 1 

Query: 54  YAICGDQTVKRIVLTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGE- 113
           YAICGDQTVKRI LTRPSTKARLANIDGVNQHLLKMHGDLIL+AVK LSQ+V LSLDGE 
Sbjct: 341 YAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGEY 400

Query: 114 NKEGNAQGTATRKLYTDSNQRRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTV 173
            +EGN QGT  R                               K+   P +  P+     
Sbjct: 401 REEGNGQGTTMR-------------------------------KLYTEPNQRRPLAPAKF 460

Query: 174 SGYILDAVQEGYAIDWTKFCDEIGLTCRIFSDVQSAIMKVGSSEKLKAIKDELPEEYNTL 233
             +              K   E GL+ +  ++    +  +  +     I D + E Y   
Sbjct: 461 EAW--------------KMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYE-- 520

Query: 234 VLHAFKFLVPFMPTLIGFS-----VESPSSVYDWKLI---FGWQINYAHIKACLVMQSCG 293
            +   KF      T   FS     V    S    K I      +INYAHIKACLVMQS G
Sbjct: 521 -IDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRG 580

Query: 294 ISPEGLLPSSHQDKKTDERMNGASTFSGSPTLI-QKEEPCVIETPSNGEEEISASLKRQK 353
           +SPEGL      D+KTDE M GAS  SGSPT I +KEEPCVIETPSNGEEEIS SLKRQK
Sbjct: 581 MSPEGL------DRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISVSLKRQK 616

Query: 354 VCESKDERRVPVKATESLLVEWLKNNDGVS 374
           VCE ++E RVP+KATESLLVEWLKNNDGV+
Sbjct: 641 VCELEEEHRVPIKATESLLVEWLKNNDGVT 616


HSP 2 Score: 290.8 bits (743), Expect = 2.4e-75
Identity = 144/229 (62.88%), Postives = 180/229 (78.60%), Query Frame = 1 

Query: 1   MIGENENDSALSEAGKMENLATLK-SGLSEAEEKLFQMLLEERMKLARTAGTAPYAICGD 60
           M+ + +N  A  E G++++LAT++  G SEAE++L+ +LLEER KLAR  GTAPYAICGD
Sbjct: 517 MVDDEDNKHASGEVGEIKSLATVECEGFSEAEKQLYHLLLEERRKLARAIGTAPYAICGD 576

Query: 61  QTVKRIVLTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGENKEGNAQ 120
           QT+K+I LTRPSTKARLANIDGVNQHL+  HG+  L+ ++ LSQ + L+LDGE      Q
Sbjct: 577 QTIKKIALTRPSTKARLANIDGVNQHLVVAHGNNFLRIIQDLSQGLNLTLDGE---ATVQ 636

Query: 121 GTATRKLYTDSNQRRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSGYILDA 180
              TRK+Y  SNQ ++L PAKFEAWKMWHE+GLSI+KIANFPGR APIKE TV  Y++DA
Sbjct: 637 TAFTRKVYPVSNQPKKLTPAKFEAWKMWHEEGLSIRKIANFPGRPAPIKELTVHEYLMDA 696

Query: 181 VQEGYAIDWTKFCDEIGLTCRIFSDVQSAIMKVGSSEKLKAIKDELPEE 229
            QEG  IDW + CDE+GLT ++FSD+Q AI KVGSSEKLK IK+ELPE+
Sbjct: 697 AQEGCEIDWIRLCDEVGLTRKVFSDIQCAISKVGSSEKLKPIKEELPED 742

[Close]
BLAST of Cla012113 vs. TrEMBL
Match: M5W6N4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001081mg PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.2e-06
Identity = 45/133 (33.83%), Postives = 59/133 (44.36%), Query Frame = 1 

Query: 269 INYAHIKACLVMQSCGISPEGLLPSSHQDKKTDERMNGASTFSGSPTLIQK-EEPCVIET 328
           I+Y HIK CL MQ  GIS + +  + H  +K  +  N  +  S   T     E PC  ET
Sbjct: 743 ISYGHIKTCLAMQKYGISLDVIPSNLHNAQKAGQLSNKETESSPCSTRTSPIEGPCEAET 802

Query: 329 ------PSNGEEEISASL---------------------KRQKVCESKDERRVPVKATES 374
                  + GE E +AS+                     KRQK+    D   + +KATES
Sbjct: 803 LVQNSVATLGENEETASVPLTWGQTVKLPKVHFEDALSKKRQKLSSPDDGNSIALKATES 862


HSP 2 Score: 282.7 bits (722), Expect = 6.4e-73
Identity = 179/381 (46.98%), Postives = 235/381 (61.68%), Query Frame = 1 

Query: 1   MIGENENDSALSEAGKMENLATLKS-GLSEAEEKLFQMLLEERMKLARTAGTAPYAICGD 60
           M+GE +N +   EA K   L+T +S G SEAE +L+QMLLEER+KLAR+ GTAPYAICGD
Sbjct: 520 MLGEEDNGNT-QEAFK--TLSTSESEGFSEAEGQLYQMLLEERLKLARSVGTAPYAICGD 579

Query: 61  QTVKRIVLTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGENKEGNA- 120
           QT+K+I LTRPSTKARLANIDGVNQHL+  +GD  LQ ++ LSQ + LSLDGE +   A 
Sbjct: 580 QTIKKIALTRPSTKARLANIDGVNQHLVTEYGDDFLQVIQKLSQVLNLSLDGEARVATAS 639

Query: 121 -QGTATRKLYTDSNQRRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSGYIL 180
            Q    RK+   +N+  +L PAKFEAWK WHEDG SI +IANFPGRSAPIKE +V+ Y+L
Sbjct: 640 LQTNEVRKVSLVTNKSNKLTPAKFEAWKKWHEDGCSIHEIANFPGRSAPIKEQSVAEYLL 699

Query: 181 DAVQEGYAIDWTKFCDEIGLTCRIFSDVQSAIMKVGSSEKLKAIKDELPEEYNTLVLHAF 240
           +A QEG   DW +F + IGLT  I S++Q AI KVGS++KLK IK+ELPEE +   +  +
Sbjct: 700 EAAQEGLPFDWARFSEMIGLTQGIISEIQGAISKVGSTDKLKPIKNELPEEISYQHIKTY 759

Query: 241 KFLVPFMPTLIGFSVESPSSVYDWKLIFGWQINYAHIKACLVMQSCGISPEGLLPSSHQD 300
             +        G S+E+  S  +     G     AH  + L         +  L + H +
Sbjct: 760 LTM-----RNCGISLEAIQSGSNQT---GKDDEPAHNASNL--------SDPTLETCHVE 819

Query: 301 KKTDERMNGASTFSGSPTLIQKEEPCVIETPSNGEE--------EISASLKRQKVCESKD 360
           +  ++ ++  S+       I  E P +   P NG E        E   + KRQKV E+K+
Sbjct: 820 RYCEDGISAKSSLEKWDLEID-EVPIL---PVNGSEVQKLPLVCEGEFTNKRQKVSETKE 877

Query: 361 ERRVPVKATESLLVEWLKNND 371
                +KATES +VEWLKN D
Sbjct: 880 VNSTKLKATESSVVEWLKNLD 877

[Close]
BLAST of Cla012113 vs. TrEMBL
Match: K7MQ01_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G048900 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 6.4e-73
Identity = 179/381 (46.98%), Postives = 235/381 (61.68%), Query Frame = 1 

Query: 1   MIGENENDSALSEAGKMENLATLKS-GLSEAEEKLFQMLLEERMKLARTAGTAPYAICGD 60
           M+GE +N +   EA K   L+T +S G SEAE +L+QMLLEER+KLAR+ GTAPYAICGD
Sbjct: 520 MLGEEDNGNT-QEAFK--TLSTSESEGFSEAEGQLYQMLLEERLKLARSVGTAPYAICGD 579

Query: 61  QTVKRIVLTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGENKEGNA- 120
           QT+K+I LTRPSTKARLANIDGVNQHL+  +GD  LQ ++ LSQ + LSLDGE +   A 
Sbjct: 580 QTIKKIALTRPSTKARLANIDGVNQHLVTEYGDDFLQVIQKLSQVLNLSLDGEARVATAS 639

Query: 121 -QGTATRKLYTDSNQRRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSGYIL 180
            Q    RK+   +N+  +L PAKFEAWK WHEDG SI +IANFPGRSAPIKE +V+ Y+L
Sbjct: 640 LQTNEVRKVSLVTNKSNKLTPAKFEAWKKWHEDGCSIHEIANFPGRSAPIKEQSVAEYLL 699

Query: 181 DAVQEGYAIDWTKFCDEIGLTCRIFSDVQSAIMKVGSSEKLKAIKDELPEEYNTLVLHAF 240
           +A QEG   DW +F + IGLT  I S++Q AI KVGS++KLK IK+ELPEE +   +  +
Sbjct: 700 EAAQEGLPFDWARFSEMIGLTQGIISEIQGAISKVGSTDKLKPIKNELPEEISYQHIKTY 759

Query: 241 KFLVPFMPTLIGFSVESPSSVYDWKLIFGWQINYAHIKACLVMQSCGISPEGLLPSSHQD 300
             +        G S+E+  S  +     G     AH  + L         +  L + H +
Sbjct: 760 LTM-----RNCGISLEAIQSGSNQT---GKDDEPAHNASNL--------SDPTLETCHVE 819

Query: 301 KKTDERMNGASTFSGSPTLIQKEEPCVIETPSNGEE--------EISASLKRQKVCESKD 360
           +  ++ ++  S+       I  E P +   P NG E        E   + KRQKV E+K+
Sbjct: 820 RYCEDGISAKSSLEKWDLEID-EVPIL---PVNGSEVQKLPLVCEGEFTNKRQKVSETKE 877

Query: 361 ERRVPVKATESLLVEWLKNND 371
                +KATES +VEWLKN D
Sbjct: 880 VNSTKLKATESSVVEWLKNLD 877

[Close]
BLAST of Cla012113 vs. TrEMBL
Match: V4SWT4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001421mg PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.9e-72
Identity = 141/229 (61.57%), Postives = 177/229 (77.29%), Query Frame = 1 

Query: 1   MIGENENDSALSEAGKMENLATLKS-GLSEAEEKLFQMLLEERMKLARTAGTAPYAICGD 60
           M+   E+++  S  G +++ ATL++ G SEA+ +L+ MLLEER KLAR  GTAPYA+CGD
Sbjct: 1   MVDAEEHETISSNVGDLKSSATLENEGFSEADMQLYHMLLEERKKLARVTGTAPYALCGD 60

Query: 61  QTVKRIVLTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGENKEGNAQ 120
           QT+K+I L RPSTKARLANIDGVNQHL+  HGD +LQ ++HLSQ++ LSLDG+  E  A 
Sbjct: 61  QTIKKIALARPSTKARLANIDGVNQHLVITHGDHLLQTIRHLSQKLNLSLDGKVGEHTA- 120

Query: 121 GTATRKLYTDSNQRRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSGYILDA 180
              TRKL+   N R +L PAK EAWKMWHEDGLSIQKIAN+PGRSAPIKE TV  Y+L+A
Sbjct: 121 --FTRKLHVVVNTRTKLTPAKCEAWKMWHEDGLSIQKIANYPGRSAPIKEQTVVDYLLEA 180

Query: 181 VQEGYAIDWTKFCDEIGLTCRIFSDVQSAIMKVGSSEKLKAIKDELPEE 229
           V EG+ I+WT+ CDE+GLT  IFS +Q AI KVG  +KLK IK+ELP++
Sbjct: 181 VSEGFDINWTRLCDEVGLTDEIFSAIQEAISKVGCKDKLKPIKNELPDD 226

[Close]
BLAST of Cla012113 vs. NCBI nr
Match: gi|659082756|ref|XP_008442016.1| (PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X2 [Cucumis melo])

HSP 1 Score: 404.4 bits (1038), Expect = 2.1e-109
Identity = 201/231 (87.01%), Postives = 218/231 (94.37%), Query Frame = 1 

Query: 1   MIGENENDSALSEAGKMENLATLKSGLSEAEEKLFQMLLEERMKLARTAGTAPYAICGDQ 60
           +IGENE+DSAL+EAGKM+NLATLKSGLSEAEEKLFQ+LLEERMKLAR+AGTAPYA+CGDQ
Sbjct: 391 LIGENEDDSALTEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKLARSAGTAPYAVCGDQ 450

Query: 61  TVKRIVLTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGE-NKEGNAQ 120
           TVKRI LTRPSTKARLANIDGVNQHLLKMHGDLIL+AVK LSQ+V LSLDGE  +EGN Q
Sbjct: 451 TVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKLLSQQVSLSLDGEYREEGNGQ 510

Query: 121 GTATRKLYTDSNQRRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSGYILDA 180
           GT TRKLYT+ NQRR LAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTV GYI+DA
Sbjct: 511 GTTTRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVCGYIVDA 570

Query: 181 VQEGYAIDWTKFCDEIGLTCRIFSDVQSAIMKVGSSEKLKAIKDELPEEYN 231
           VQEGY IDWTKFC+EIGLTCRIFS++QSA+ KVGS+EKLKAIKDELPEE N
Sbjct: 571 VQEGYEIDWTKFCNEIGLTCRIFSNIQSAVTKVGSAEKLKAIKDELPEEIN 621

[Close]
BLAST of Cla012113 vs. NCBI nr
Match: gi|659082756|ref|XP_008442016.1| (PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X2 [Cucumis melo])

HSP 1 Score: 341.3 bits (874), Expect = 2.2e-90
Identity = 212/383 (55.35%), Postives = 243/383 (63.45%), Query Frame = 1 

Query: 1   MIGENENDSALSEAGKMENLATLKSGLSEAEEKLFQMLLEERMKLARTAGTAPYAICGDQ 60
           +IGENE+DSAL+EAGKM+NLATLKSGLSEAEEKLFQ+LLEERMKLAR+AGTAPYA+CGDQ
Sbjct: 391 LIGENEDDSALTEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKLARSAGTAPYAVCGDQ 450

Query: 61  TVKRIVLTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGE-NKEGNAQ 120
           TVKRI LTRPSTKARLANIDGVNQHLLKMHGDLIL+AVK LSQ+V LSLDGE  +EGN Q
Sbjct: 451 TVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKLLSQQVSLSLDGEYREEGNGQ 510

Query: 121 GTATRKLYTDSNQRRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSGYILDA 180
           GT TR                               K+   P +  P+       +    
Sbjct: 511 GTTTR-------------------------------KLYTEPNQRRPLAPAKFEAW---- 570

Query: 181 VQEGYAIDWTKFCDEIGLTCRIFSDVQSAIMKVGSSEKLKAIKDELPEEYNTLVLHAFKF 240
                     K   E GL+ +  ++       +  +     I D + E Y    +   KF
Sbjct: 571 ----------KMWHEDGLSIQKIANFPGRSAPIKETTVCGYIVDAVQEGYE---IDWTKF 630

Query: 241 LVPFMPTLIGFS-----VESPSSVYDWKLI---FGWQINYAHIKACLVMQSCGISPEGLL 300
                 T   FS     V    S    K I      +INYAHIKACLVMQSCG+SPEGL 
Sbjct: 631 CNEIGLTCRIFSNIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSCGMSPEGL- 690

Query: 301 PSSHQDKKTDERMNGASTFSGSPTLI-QKEEPCVIETPSNGEEEISASLKRQKVCESKDE 360
                D+KTDE M GAS  SGSPT I +KEEPCVIETPSNGEEEIS SLKRQKV ES++E
Sbjct: 691 -----DRKTDEPMIGASLLSGSPTSIKKKEEPCVIETPSNGEEEISVSLKRQKVRESEEE 719

Query: 361 RRVPVKATESLLVEWLKNNDGVS 374
           R+VPVKATESLL+EWLKNNDGV+
Sbjct: 751 RQVPVKATESLLIEWLKNNDGVT 719


HSP 2 Score: 404.4 bits (1038), Expect = 2.1e-109
Identity = 201/231 (87.01%), Postives = 218/231 (94.37%), Query Frame = 1 

Query: 1   MIGENENDSALSEAGKMENLATLKSGLSEAEEKLFQMLLEERMKLARTAGTAPYAICGDQ 60
           +IGENE+DSAL+EAGKM+NLATLKSGLSEAEEKLFQ+LLEERMKLAR+AGTAPYA+CGDQ
Sbjct: 515 LIGENEDDSALTEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKLARSAGTAPYAVCGDQ 574

Query: 61  TVKRIVLTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGE-NKEGNAQ 120
           TVKRI LTRPSTKARLANIDGVNQHLLKMHGDLIL+AVK LSQ+V LSLDGE  +EGN Q
Sbjct: 575 TVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKLLSQQVSLSLDGEYREEGNGQ 634

Query: 121 GTATRKLYTDSNQRRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSGYILDA 180
           GT TRKLYT+ NQRR LAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTV GYI+DA
Sbjct: 635 GTTTRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVCGYIVDA 694

Query: 181 VQEGYAIDWTKFCDEIGLTCRIFSDVQSAIMKVGSSEKLKAIKDELPEEYN 231
           VQEGY IDWTKFC+EIGLTCRIFS++QSA+ KVGS+EKLKAIKDELPEE N
Sbjct: 695 VQEGYEIDWTKFCNEIGLTCRIFSNIQSAVTKVGSAEKLKAIKDELPEEIN 745

[Close]
BLAST of Cla012113 vs. NCBI nr
Match: gi|659082754|ref|XP_008442015.1| (PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X1 [Cucumis melo])

HSP 1 Score: 341.3 bits (874), Expect = 2.2e-90
Identity = 212/383 (55.35%), Postives = 243/383 (63.45%), Query Frame = 1 

Query: 1   MIGENENDSALSEAGKMENLATLKSGLSEAEEKLFQMLLEERMKLARTAGTAPYAICGDQ 60
           +IGENE+DSAL+EAGKM+NLATLKSGLSEAEEKLFQ+LLEERMKLAR+AGTAPYA+CGDQ
Sbjct: 515 LIGENEDDSALTEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKLARSAGTAPYAVCGDQ 574

Query: 61  TVKRIVLTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGE-NKEGNAQ 120
           TVKRI LTRPSTKARLANIDGVNQHLLKMHGDLIL+AVK LSQ+V LSLDGE  +EGN Q
Sbjct: 575 TVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKLLSQQVSLSLDGEYREEGNGQ 634

Query: 121 GTATRKLYTDSNQRRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSGYILDA 180
           GT TR                               K+   P +  P+       +    
Sbjct: 635 GTTTR-------------------------------KLYTEPNQRRPLAPAKFEAW---- 694

Query: 181 VQEGYAIDWTKFCDEIGLTCRIFSDVQSAIMKVGSSEKLKAIKDELPEEYNTLVLHAFKF 240
                     K   E GL+ +  ++       +  +     I D + E Y    +   KF
Sbjct: 695 ----------KMWHEDGLSIQKIANFPGRSAPIKETTVCGYIVDAVQEGYE---IDWTKF 754

Query: 241 LVPFMPTLIGFS-----VESPSSVYDWKLI---FGWQINYAHIKACLVMQSCGISPEGLL 300
                 T   FS     V    S    K I      +INYAHIKACLVMQSCG+SPEGL 
Sbjct: 755 CNEIGLTCRIFSNIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSCGMSPEGL- 814

Query: 301 PSSHQDKKTDERMNGASTFSGSPTLI-QKEEPCVIETPSNGEEEISASLKRQKVCESKDE 360
                D+KTDE M GAS  SGSPT I +KEEPCVIETPSNGEEEIS SLKRQKV ES++E
Sbjct: 815 -----DRKTDEPMIGASLLSGSPTSIKKKEEPCVIETPSNGEEEISVSLKRQKVRESEEE 843

Query: 361 RRVPVKATESLLVEWLKNNDGVS 374
           R+VPVKATESLL+EWLKNNDGV+
Sbjct: 875 RQVPVKATESLLIEWLKNNDGVT 843


HSP 2 Score: 401.7 bits (1031), Expect = 1.4e-108
Identity = 201/231 (87.01%), Postives = 214/231 (92.64%), Query Frame = 1 

Query: 1   MIGENENDSALSEAGKMENLATLKSGLSEAEEKLFQMLLEERMKLARTAGTAPYAICGDQ 60
           MIGENE+DSAL EAGKM+NLAT KSGLSEAEEKLFQ+LLEERMKLAR+AGTAPYAICGDQ
Sbjct: 512 MIGENEDDSALIEAGKMDNLATFKSGLSEAEEKLFQLLLEERMKLARSAGTAPYAICGDQ 571

Query: 61  TVKRIVLTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGE-NKEGNAQ 120
           TVKRI LTRPSTKARLANIDGVNQHLLKMHGDLIL+AVK LSQ+V LSLDGE  +EGN Q
Sbjct: 572 TVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGEYREEGNGQ 631

Query: 121 GTATRKLYTDSNQRRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSGYILDA 180
           GT  RKLYT+ NQRR LAPAKFEAWKMWHEDGLSIQKIANFPGR APIKETTV GYI+DA
Sbjct: 632 GTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDA 691

Query: 181 VQEGYAIDWTKFCDEIGLTCRIFSDVQSAIMKVGSSEKLKAIKDELPEEYN 231
           VQEGY IDWTKFCDEIGLTC+IFSD+QSA+ KVGS+EKLKAIKDELPEE N
Sbjct: 692 VQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEIN 742

[Close]
BLAST of Cla012113 vs. NCBI nr
Match: gi|778692430|ref|XP_011653463.1| (PREDICTED: ATP-dependent DNA helicase Q-like SIM [Cucumis sativus])

HSP 1 Score: 339.7 bits (870), Expect = 6.3e-90
Identity = 211/383 (55.09%), Postives = 239/383 (62.40%), Query Frame = 1 

Query: 1   MIGENENDSALSEAGKMENLATLKSGLSEAEEKLFQMLLEERMKLARTAGTAPYAICGDQ 60
           MIGENE+DSAL EAGKM+NLAT KSGLSEAEEKLFQ+LLEERMKLAR+AGTAPYAICGDQ
Sbjct: 512 MIGENEDDSALIEAGKMDNLATFKSGLSEAEEKLFQLLLEERMKLARSAGTAPYAICGDQ 571

Query: 61  TVKRIVLTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGE-NKEGNAQ 120
           TVKRI LTRPSTKARLANIDGVNQHLLKMHGDLIL+AVK LSQ+V LSLDGE  +EGN Q
Sbjct: 572 TVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGEYREEGNGQ 631

Query: 121 GTATRKLYTDSNQRRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSGYILDA 180
           GT  R                               K+   P +  P+       +    
Sbjct: 632 GTTMR-------------------------------KLYTEPNQRRPLAPAKFEAW---- 691

Query: 181 VQEGYAIDWTKFCDEIGLTCRIFSDVQSAIMKVGSSEKLKAIKDELPEEYNTLVLHAFKF 240
                     K   E GL+ +  ++    +  +  +     I D + E Y    +   KF
Sbjct: 692 ----------KMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYE---IDWTKF 751

Query: 241 LVPFMPTLIGFS-----VESPSSVYDWKLI---FGWQINYAHIKACLVMQSCGISPEGLL 300
                 T   FS     V    S    K I      +INYAHIKACLVMQS G+SPEGL 
Sbjct: 752 CDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGL- 811

Query: 301 PSSHQDKKTDERMNGASTFSGSPTLI-QKEEPCVIETPSNGEEEISASLKRQKVCESKDE 360
                D+KTDE M GAS  SGSPT I +KEEPCVIETPSNGEEEIS SLKRQKVCE ++E
Sbjct: 812 -----DRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISVSLKRQKVCELEEE 840

Query: 361 RRVPVKATESLLVEWLKNNDGVS 374
            RVP+KATESLLVEWLKNNDGV+
Sbjct: 872 HRVPIKATESLLVEWLKNNDGVT 840


HSP 2 Score: 360.9 bits (925), Expect = 2.7e-96
Identity = 186/241 (77.18%), Postives = 202/241 (83.82%), Query Frame = 1 

Query: 1   MIGENENDSALSEAGKMENLATLKSGLSEAEEKLFQMLLEERMKLARTAGTAPYAICGDQ 60
           M GENE+ SALSE+GKM+NLATLKSGLSEAEEKLFQ+LLEERMKLAR+A TAPYAICGDQ
Sbjct: 516 MTGENEDASALSESGKMDNLATLKSGLSEAEEKLFQLLLEERMKLARSARTAPYAICGDQ 575

Query: 61  TVKRIVLTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGENKEGNAQG 120
           TV+RI LTRPSTKARLANIDGVNQHLLKMHGDLIL+AVK LSQ+V LSLDGE        
Sbjct: 576 TVQRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGE-------- 635

Query: 121 TATRKLYTDSNQRRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSGYILDAV 180
                 Y + N+RR LAP KFEAWKMWHE GLS+QKIANFPGRSAPIKETTVSGYI+DA 
Sbjct: 636 ------YREPNKRRPLAPEKFEAWKMWHEHGLSVQKIANFPGRSAPIKETTVSGYIVDAA 695

Query: 181 QEGYAIDWTKFCDEIGLTCRIFSDVQSAIMKVGSSEKLKAIKDELPEEYNTLVLHAFKFL 240
           QEGY IDWTKFCDEIG TC+IFSD+QSA+ KVGS+EKLK IK ELPEE N    H   FL
Sbjct: 696 QEGYEIDWTKFCDEIGFTCQIFSDIQSAVTKVGSAEKLKPIKSELPEEIN--YAHIKTFL 740

Query: 241 V 242
           V
Sbjct: 756 V 740

[Close]
BLAST of Cla012113 vs. NCBI nr
Match: gi|659082733|ref|XP_008442004.1| (PREDICTED: Werner syndrome ATP-dependent helicase homolog [Cucumis melo])

HSP 1 Score: 51.2 bits (121), Expect = 4.5e-03
Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 1 

Query: 268 QINYAHIKACLVMQSCGISPEGLLPSSHQDKKTDERMNGAST 310
           +INYAHIK  LVMQSCG+SP+GL      DKKTD+   GAS+
Sbjct: 729 EINYAHIKTFLVMQSCGMSPKGL------DKKTDKPRTGASS 764


HSP 2 Score: 335.5 bits (859), Expect = 1.2e-88
Identity = 168/227 (74.01%), Postives = 194/227 (85.46%), Query Frame = 1 

Query: 1   MIGENENDSALSEAGKMENLATLKSGLSEAEEKLFQMLLEERMKLARTAGTAPYAICGDQ 60
           MIGENE+DSALSEAGKM+NLATLKSGLSEAEEKLFQ+LLEERMK+AR+  T PYAICGDQ
Sbjct: 515 MIGENEDDSALSEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKIARSVRTVPYAICGDQ 574

Query: 61  TVKRIVLTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGENKEGNAQG 120
           T+KRI L RPSTKARLANIDGVN+HLL MHGDLIL+AVK LSQ+V  SLDGE ++ N   
Sbjct: 575 TIKRIALIRPSTKARLANIDGVNRHLLTMHGDLILEAVKRLSQQVSQSLDGEYRKPN--- 634

Query: 121 TATRKLYTDSNQRRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSGYILDAV 180
                      +RR L+PA+F+ WKMWHEDGLSIQKIANFPGRSAPI+ET+V  YI+DAV
Sbjct: 635 ----------RRRRPLSPARFKTWKMWHEDGLSIQKIANFPGRSAPIRETSVFQYIIDAV 694

Query: 181 QEGYAIDWTKFCDEIGLTCRIFSDVQSAIMKVGSSEKLKAIKDELPE 228
           Q+GY IDWTKFCDEIG T +IFSD+QSA+ KVGS++KLKAIK+E+PE
Sbjct: 695 QKGYEIDWTKFCDEIGFTGQIFSDIQSAVTKVGSAKKLKAIKNEVPE 728

The following BLAST results are available for this feature:
BLAST of Cla012113 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1A4_CUCSA5.8e-8286.52Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188732 PE=4 SV=1[more]
A0A0A0L1A4_CUCSA2.7e-6349.70Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188732 PE=4 SV=1[more]
M5W6N4_PRUPE5.2e-0633.83Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001081mg PE=4 SV=1[more]
K7MQ01_SOYBN6.4e-7346.98Uncharacterized protein OS=Glycine max GN=GLYMA_18G048900 PE=4 SV=1[more]
V4SWT4_9ROSI1.9e-7261.57Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001421mg PE=4 SV=1[more]
BLAST of Cla012113 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082756|ref|XP_008442016.1|2.1e-10987.01PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X2 [Cucumis me... [more]
gi|659082756|ref|XP_008442016.1|2.2e-9055.35PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X2 [Cucumis me... [more]
gi|659082754|ref|XP_008442015.1|2.2e-9055.35PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X1 [Cucumis me... [more]
gi|778692430|ref|XP_011653463.1|6.3e-9055.09PREDICTED: ATP-dependent DNA helicase Q-like SIM [Cucumis sativus][more]
gi|659082733|ref|XP_008442004.1|4.5e-0361.90PREDICTED: Werner syndrome ATP-dependent helicase homolog [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002121HRDC_dom
IPR010997HRDC-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
biological_process GO:0006260 DNA replication
biological_process GO:0008150 biological_process
biological_process GO:0044237 cellular metabolic process
biological_process GO:0032508 DNA duplex unwinding
biological_process GO:0006310 DNA recombination
biological_process GO:0006281 DNA repair
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005657 replication fork
cellular_component GO:0005622 intracellular
molecular_function GO:0043140 ATP-dependent 3'-5' DNA helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0043138 3'-5' DNA helicase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012113Cla012113.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002121HRDC domainGENE3DG3DSA:1.10.150.80coord: 31..104
score: 5.
IPR002121HRDC domainPFAMPF00570HRDCcoord: 32..98
score: 5.9
IPR002121HRDC domainSMARTSM00341hrdc7coord: 28..108
score: 0.
IPR002121HRDC domainPROFILEPS50967HRDCcoord: 28..108
score: 1
IPR010997HRDC-likeunknownSSF47819HRDC-likecoord: 25..104
score: 1.29
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 25..232
score: 2.8
NoneNo IPR availablePANTHERPTHR13710:SF69ATP-DEPENDENT DNA HELICASE Q-LIKE SIMcoord: 25..232
score: 2.8