Cucsa.320990 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.320990
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionBnaA06g40010D protein
Locationscaffold03080 : 838481 .. 840776 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCTTCTTTCATGGCTTCCGCTTGCCAAAGAATTGCGAGCAGAATCTCTCAGTCCTCATTCAGAACATTCGTCCGTACGAATTCTTCCGCCAAATCTTCATCTTCTCCGTTCCCTCTACCTTCCAAATCCACTGCTCCCTCTGTTCGCCGATTCTCGCTCGCCAGGTATCTCTTTTTTTATTATTTCCTTTCTCCTTGTTTCAGTTTTTCTCTTTGTTCTTTTACGAACCTTCTTTAACTACTGTTAGGTCTCCGTCGGAGCTGGGATGTGTTCAATCCCTTTTGCCATTTCACGACGCGGTTGCTGGAGCGAGAATGATTTCGTGTCTGAGTACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTATTCTCTGCTGCACCTCTCCCGGCCTCTAACATGAAATATTATGCTTTCTTTTGAAGTGTGAGTAGCTTTTTTATGCATTAATCTACAGACTTTCCCTTTTTATTGCTCTACAATTTGTTTGTCTGTGTCCTTTTTGTGTTGGTATTTGCTGATTCTTGTTGTCTCTGTCATTGTTGTGTTGTTCCAAAAATCTTGCAGCTTCTGTATGAAGTGGAACATTCTGTTAAAATTGGTGAAATTTAAGTTTAGAAGTCTAGAATATTGGATCGTTGCTTATACTTAAGGAGGTTGGTGGCAAAATTATGTAAAAGATGGGAGGATAAGCTAGAACGTTGAAGTCAACCATCTTGGGGAGAGAAACCATCTTAGATTTGGTCCTCTCCCTTGCCTTCGGTATCTAGTTTCGTTGTTTATTGGTTTCAACTTTTGTCCCCCAGTTAAATTGGTCATTTTCTTTAGTAAGGTTAGTTATTAGAACTGGAATGGAATGAATGGGATGGGTTTGGTTGTTGACTGGGGACCTTGAAACTGACTAGAGTATTTGGTTCCTGCAGGCACATAATATCAATTGTCAATATGCTTGAAAGAAATAGATTGGAAGTTTACGGAGCATCAGATTATGGTGCAGTGAATCCATTTCAAGTACGAAACTAATCATCTTTTAGTTGTCCTAATATGTCGAAGATATTCCAATTTCTATTATTGTGATGAACTAGTGGTCTCTGTCAGTGTTGGGTCGGCACTACTTTTAATTACCATTTGAAAAATAAAAGTGTCACATACTGCCTCATTCAGCAGTAGTCAATTCCTGAATCGTTAAATCTTTAGAGTTTCCCTTGGAAAACTTTGACTTGAAGAGTGAACTGCCAAATTTAAGAGAATGGAATGAAAAGTTAGGTTTGCCCATCAATCAGCTTAGTCTTTGCGATCTAGCTATTATCATCCTGAAAGAAAAATTTATCTCGGACAAGAATCTGTTCTATTCTTTTGGAGATCATTACCTTAGAGTAAAGGGATGATCCAGTCCAGTCAATAGATTTAGTTAATTGTAATCCGTTATGTGAAGTAAGCTTTGTTTGTTCGATGATCTGCATCATTTTTGTTTACATCACTTGTGTTTAGCTCACAGATAATCTTATGATTGTTCTTATCATTCAAACCATCAGTTTTCTTTTGTCAAATAATCTATATGACATAACTTCTCATTGCCTCAGATGCAATTGATGGTACGTGAGACATATTTGCTGTTTTTGAAGGTGGGCCAGTCACTCTATGCTTCACTAATTTAGAAATATCACTTTTGAGTGATGTGTAAATGGTTCCGCATTAGTTCTTAGTGCCTTTAGTTTACGTGTGTAAATTTAATGAAACCCATCTCATAGATTATTCCTGTGCCACACCTCAACTAATCTTATAGGACAATTGTCTAACCCAGAAAGTATCTATGTGTATGGTCAAATAGATGTTGCATCAGTTATCTTGAATCAGAGATGAGTCATGTTGCATTTTGGACTCTTGGTAGAAATCTACCGACATTCTTAGTCAGCTTTTCTTATGTTGTATTTGTATTCTGTGGCTGCAGAGTTAGGTTTATCCGTTCCAAGGTGACTTTTTCCGGCAAATTGTTGCAGTGACAAGGAGATATCAGTAATGGTTTAGAGGATTTCTTTTATGAACTGTGCCGAATACTGCTCAATTTGGTTAACTAATTTTGATTCATCCAAACAACAGATTGTGTTGAAATAAGAATATAGTGATTCTAGTTCTCATGGCAACTCAGGAAATCATACTTTTGCCATTGTTGTGGGTTATAAATGTTTGATCCTTTTCATACATTCAATATGTACGTTTGTTATTTATTAAGATACACATCATATTATTTTCTTGCCTTTTGGTATATTATGAAGACAAATTGGATCTTTTTT

mRNA sequence

GTTCTTCTTTCATGGCTTCCGCTTGCCAAAGAATTGCGAGCAGAATCTCTCAGTCCTCATTCAGAACATTCGTCCGTACGAATTCTTCCGCCAAATCTTCATCTTCTCCGTTCCCTCTACCTTCCAAATCCACTGCTCCCTCTGTTCGCCGATTCTCGCTCGCCAGGTCTCCGTCGGAGCTGGGATGTGTTCAATCCCTTTTGCCATTTCACGACGCGGTTGCTGGAGCGAGAATGATTTCGTGTCTGAGTACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGCACATAATATCAATTGTCAATATGCTTGAAAGAAATAGATTGGAAGTTTACGGAGCATCAGATTATGGTGCAGTGAATCCATTTCAAATGCAATTGATGGTACGTGAGACATATTTGCTGTTTTTGAAGAGTTAGGTTTATCCGTTCCAAGGTGACTTTTTCCGGCAAATTGTTGCAGTGACAAGGAGATATCAGTAATGGTTTAGAGGATTTCTTTTATGAACTGTGCCGAATACTGCTCAATTTGGTTAACTAATTTTGATTCATCCAAACAACAGATTGTGTTGAAATAAGAATATAGTGATTCTAGTTCTCATGGCAACTCAGGAAATCATACTTTTGCCATTGTTGTGGGTTATAAATGTTTGATCCTTTTCATACATTCAATATGTACGTTTGTTATTTATTAAGATACACATCATATTATTTTCTTGCCTTTTGGTATATTATGAAGACAAATTGGATCTTTTTT

Coding sequence (CDS)

ATGGCTTCCGCTTGCCAAAGAATTGCGAGCAGAATCTCTCAGTCCTCATTCAGAACATTCGTCCGTACGAATTCTTCCGCCAAATCTTCATCTTCTCCGTTCCCTCTACCTTCCAAATCCACTGCTCCCTCTGTTCGCCGATTCTCGCTCGCCAGGTCTCCGTCGGAGCTGGGATGTGTTCAATCCCTTTTGCCATTTCACGACGCGGTTGCTGGAGCGAGAATGATTTCGTGTCTGAGTACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGCACATAA

Protein sequence

MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGT*
Homology
[Close]
BLAST of Cucsa.320990 vs. TrEMBL
Match: A0A0A0L1I6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G019950 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 7.9e-42
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCV 60
          MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCV
Sbjct: 1  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCV 60

Query: 61 QSLLPFHDAVAGARMISCLSTNSRSCRALSQ 92
          QSLLPFHDAVAGARMISCLSTNSRSCRALSQ
Sbjct: 61 QSLLPFHDAVAGARMISCLSTNSRSCRALSQ 91

[Close]
BLAST of Cucsa.320990 vs. TrEMBL
Match: A0A067FD99_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034143mg PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.2e-27
Identity = 65/103 (63.11%), Postives = 78/103 (75.73%), Query Frame = 1 

Query: 1   MASACQRIASRISQSSFRTFVRTNS--SAKSSSSPFPLPSKSTAPSVRRFSLARSPSELG 60
           MAS+C R   R S SS ++  R+N+  S  ++S+PFPLP+KS+   +RRFSL+RSPSELG
Sbjct: 1   MASSCHRFIRRSSLSSIKSAFRSNAPKSPTAASAPFPLPTKSSPSPLRRFSLSRSPSELG 60

Query: 61  CVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPGL 102
           C QSLLP H  VA ARM SCLS  S+SCRALSQG LCCTSPGL
Sbjct: 61  CAQSLLPLHSVVAAARMTSCLSAASKSCRALSQGTLCCTSPGL 103

[Close]
BLAST of Cucsa.320990 vs. TrEMBL
Match: V4TJG5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023003mg PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.6e-26
Identity = 64/103 (62.14%), Postives = 77/103 (74.76%), Query Frame = 1 

Query: 1   MASACQRIASRISQSSFRTFVRTNS--SAKSSSSPFPLPSKSTAPSVRRFSLARSPSELG 60
           MAS+C R   R S SS ++  R+N+  S  ++S+PF LP+KS+   +RRFSL+RSPSELG
Sbjct: 1   MASSCHRFIRRSSLSSIKSAFRSNAPKSPTAASAPFRLPTKSSPSPLRRFSLSRSPSELG 60

Query: 61  CVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPGL 102
           C QSLLP H  VA ARM SCLS  S+SCRALSQG LCCTSPGL
Sbjct: 61  CAQSLLPLHSVVAAARMTSCLSAASKSCRALSQGTLCCTSPGL 103

[Close]
BLAST of Cucsa.320990 vs. TrEMBL
Match: D7UEA8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0459g00030 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.0e-25
Identity = 64/108 (59.26%), Postives = 77/108 (71.30%), Query Frame = 1 

Query: 1   MASACQRIASRISQSSFRTFVRTNS-------SAKSSSSPFPLPSKSTAPSVRRFSLARS 60
           MAS+C R  SR S S+ ++ +R N        SA  +SSPFPLPS+ST   +RRFS +R+
Sbjct: 1   MASSCNRFVSRASLSAVKSAIRANGRTASVNRSATPTSSPFPLPSRSTVSPLRRFSSSRT 60

Query: 61  PSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPGL 102
             ELGC+QSLLP H AVA ARM SCLS+ SRSC+ALSQG LC TSPGL
Sbjct: 61  RGELGCIQSLLPLHSAVAAARMTSCLSSTSRSCKALSQGTLCRTSPGL 108

[Close]
BLAST of Cucsa.320990 vs. TrEMBL
Match: D7U3N7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0229g00080 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.7e-25
Identity = 63/108 (58.33%), Postives = 76/108 (70.37%), Query Frame = 1 

Query: 1   MASACQRIASRISQSSFRTFVRTNS-------SAKSSSSPFPLPSKSTAPSVRRFSLARS 60
           MAS+C R  SR S S+ ++ +R N        SA  +SSPFPLPS+ST   +RRFS +R+
Sbjct: 1   MASSCNRFVSRASLSAVKSAIRANGRTASVNRSATPTSSPFPLPSRSTVSPLRRFSSSRT 60

Query: 61  PSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPGL 102
              LGC+QSLLP H AVA ARM SCLS+ SRSC+ALSQG LC TSPGL
Sbjct: 61  RGVLGCIQSLLPLHSAVAAARMTSCLSSTSRSCKALSQGTLCRTSPGL 108

[Close]
BLAST of Cucsa.320990 vs. TAIR10
Match: AT4G17310.1 (AT4G17310.1 unknown protein)

HSP 1 Score: 112.5 bits (280), Expect = 1.6e-25
Identity = 61/103 (59.22%), Postives = 75/103 (72.82%), Query Frame = 1 

Query: 1   MASACQRIASRISQSSFRTFVR--TNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELG 60
           MASAC+++ +R S SS ++ +R  T S++ +SS+ F LPS+ T    R FS +R PSELG
Sbjct: 1   MASACRKLFNRASVSSLKSTLRSTTGSTSAASSAGFRLPSQPT----RHFSFSRCPSELG 60

Query: 61  CVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPGL 102
           CVQSLLP H  VA AR+ SCLST SRS RALSQG LCCTSP L
Sbjct: 61  CVQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGTLCCTSPDL 99

[Close]
BLAST of Cucsa.320990 vs. TAIR10
Match: AT5G47455.4 (AT5G47455.4 unknown protein)

HSP 1 Score: 89.0 bits (219), Expect = 1.9e-18
Identity = 50/95 (52.63%), Postives = 62/95 (65.26%), Query Frame = 1 

Query: 7  RIASRISQSSFRTFVRTN----------SSAKSSSSPFPLPSKSTAPSVRRFSLARSPSE 66
          R  SR S SSF++ +R++          S A +SS+ F +PSK  A  + RFS +R PSE
Sbjct: 4  RFMSRSSVSSFKSAIRSSFRNSPIGTGSSPAAASSAGFRIPSKPAASPLPRFSFSRCPSE 63

Query: 67 LGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ 92
          LGCVQSLLP H  VA AR+ SCLST SRS RAL+Q
Sbjct: 64 LGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALTQ 98

[Close]
BLAST of Cucsa.320990 vs. TAIR10
Match: AT5G11630.1 (AT5G11630.1 unknown protein)

HSP 1 Score: 62.0 bits (149), Expect = 2.5e-10
Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = 1 

Query: 1   MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCV 60
           MAS C+ + S+ + S+FR+ +   S    S+S F        PS      +R   +LG +
Sbjct: 1   MASRCRSL-SKPAFSAFRSAMNKPSIRPKSASSFI----GVPPSP---GFSRPIGQLGSL 60

Query: 61  QSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPGL 102
           QSLLP + AVA AR+ SCL  +S++ R+L+QG+LC  +PG+
Sbjct: 61  QSLLPLYSAVASARLTSCLGIDSQNSRSLAQGMLCSANPGV 93

[Close]
BLAST of Cucsa.320990 vs. NCBI nr
Match: gi|449458958|ref|XP_004147213.1| (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 2.1e-48
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCV 60
           MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCV
Sbjct: 1   MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCV 60

Query: 61  QSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPGL 102
           QSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPGL
Sbjct: 61  QSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPGL 101

[Close]
BLAST of Cucsa.320990 vs. NCBI nr
Match: gi|659095923|ref|XP_008448835.1| (PREDICTED: uncharacterized protein LOC103490878 isoform X1 [Cucumis melo])

HSP 1 Score: 196.8 bits (499), Expect = 1.8e-47
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 1 

Query: 1   MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCV 60
           MASACQRIASRISQSSFRTFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLARSPSELGCV
Sbjct: 1   MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCV 60

Query: 61  QSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPGL 102
           QSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPGL
Sbjct: 61  QSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPGL 101

[Close]
BLAST of Cucsa.320990 vs. NCBI nr
Match: gi|700200722|gb|KGN55855.1| (hypothetical protein Csa_3G019950 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-41
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCV 60
          MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCV
Sbjct: 1  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCV 60

Query: 61 QSLLPFHDAVAGARMISCLSTNSRSCRALSQ 92
          QSLLPFHDAVAGARMISCLSTNSRSCRALSQ
Sbjct: 61 QSLLPFHDAVAGARMISCLSTNSRSCRALSQ 91

[Close]
BLAST of Cucsa.320990 vs. NCBI nr
Match: gi|449458960|ref|XP_004147214.1| (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-41
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCV 60
          MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCV
Sbjct: 1  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCV 60

Query: 61 QSLLPFHDAVAGARMISCLSTNSRSCRALSQ 92
          QSLLPFHDAVAGARMISCLSTNSRSCRALSQ
Sbjct: 61 QSLLPFHDAVAGARMISCLSTNSRSCRALSQ 91

[Close]
BLAST of Cucsa.320990 vs. NCBI nr
Match: gi|659095929|ref|XP_008448837.1| (PREDICTED: uncharacterized protein LOC103490878 isoform X3 [Cucumis melo])

HSP 1 Score: 174.5 bits (441), Expect = 9.6e-41
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 1 

Query: 1  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCV 60
          MASACQRIASRISQSSFRTFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLARSPSELGCV
Sbjct: 1  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCV 60

Query: 61 QSLLPFHDAVAGARMISCLSTNSRSCRALSQ 92
          QSLLPFHDAVAGARMISCLSTNSRSCRALSQ
Sbjct: 61 QSLLPFHDAVAGARMISCLSTNSRSCRALSQ 91

The following BLAST results are available for this feature:
BLAST of Cucsa.320990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1I6_CUCSA7.9e-42100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G019950 PE=4 SV=1[more]
A0A067FD99_CITSI3.2e-2763.11Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034143mg PE=4 SV=1[more]
V4TJG5_9ROSI3.6e-2662.14Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023003mg PE=4 SV=1[more]
D7UEA8_VITVI1.0e-2559.26Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0459g00030 PE=4 SV=... [more]
D7U3N7_VITVI6.7e-2558.33Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0229g00080 PE=4 SV=... [more]
BLAST of Cucsa.320990 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G17310.11.6e-2559.22 unknown protein[more]
AT5G47455.41.9e-1852.63 unknown protein[more]
AT5G11630.12.5e-1038.61 unknown protein[more]
BLAST of Cucsa.320990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458958|ref|XP_004147213.1|2.1e-48100.00PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isofo... [more]
gi|659095923|ref|XP_008448835.1|1.8e-4799.01PREDICTED: uncharacterized protein LOC103490878 isoform X1 [Cucumis melo][more]
gi|700200722|gb|KGN55855.1|1.1e-41100.00hypothetical protein Csa_3G019950 [Cucumis sativus][more]
gi|449458960|ref|XP_004147214.1|1.1e-41100.00PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isofo... [more]
gi|659095929|ref|XP_008448837.1|9.6e-4198.90PREDICTED: uncharacterized protein LOC103490878 isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.320990.4Cucsa.320990.4mRNA
Cucsa.320990.3Cucsa.320990.3mRNA
Cucsa.320990.2Cucsa.320990.2mRNA
Cucsa.320990.1Cucsa.320990.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33156FAMILY NOT NAMEDcoord: 1..93
score: 4.3
NoneNo IPR availablePANTHERPTHR33156:SF9SUBFAMILY NOT NAMEDcoord: 1..93
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.320990Cla005630Watermelon (97103) v1cgywmB585
Cucsa.320990Csa3G019950Cucumber (Chinese Long) v2cgycuB458
Cucsa.320990MELO3C013933Melon (DHL92) v3.5.1cgymeB532
Cucsa.320990ClCG10G002600Watermelon (Charleston Gray)cgywcgB556
Cucsa.320990CSPI03G02600Wild cucumber (PI 183967)cgycpiB484
Cucsa.320990CmaCh16G011310Cucurbita maxima (Rimu)cgycmaB0889
Cucsa.320990CmaCh06G007890Cucurbita maxima (Rimu)cgycmaB0897
Cucsa.320990CmoCh16G011830Cucurbita moschata (Rifu)cgycmoB0887
Cucsa.320990CmoCh06G008090Cucurbita moschata (Rifu)cgycmoB0893
Cucsa.320990Lsi07G012870Bottle gourd (USVL1VR-Ls)cgylsiB530
Cucsa.320990Cp4.1LG14g09360Cucurbita pepo (Zucchini)cgycpeB0847
Cucsa.320990Cp4.1LG08g07410Cucurbita pepo (Zucchini)cgycpeB0857
Cucsa.320990MELO3C013933.2Melon (DHL92) v3.6.1cgymedB533
Cucsa.320990CsaV3_3G002630Cucumber (Chinese Long) v3cgycucB499
Cucsa.320990Cla97C10G187150Watermelon (97103) v2cgywmbB562
Cucsa.320990Bhi11G000147Wax gourdcgywgoB645
Cucsa.320990Carg24855Silver-seed gourdcarcgyB0483
Cucsa.320990Carg25179Silver-seed gourdcarcgyB0609
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.320990Watermelon (97103) v2cgywmbB560
Cucsa.320990Cucurbita maxima (Rimu)cgycmaB0886
Cucsa.320990Cucurbita maxima (Rimu)cgycmaB0893
Cucsa.320990Cucurbita moschata (Rifu)cgycmoB0884
Cucsa.320990Cucurbita moschata (Rifu)cgycmoB0889
Cucsa.320990Wild cucumber (PI 183967)cgycpiB487
Cucsa.320990Melon (DHL92) v3.5.1cgymeB530
Cucsa.320990Watermelon (Charleston Gray)cgywcgB557
Cucsa.320990Cucurbita pepo (Zucchini)cgycpeB0853
Cucsa.320990Bottle gourd (USVL1VR-Ls)cgylsiB526
Cucsa.320990Melon (DHL92) v3.6.1cgymedB531
Cucsa.320990Cucumber (Chinese Long) v3cgycucB502