Cucsa.313450 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGCTTCAGGCGACGCCAACAATGGCGACAGCTTCCCCATCAGGTCGAAGCAACAGGGATGGAACAGCAAAAGCCATGGTTGCCGACCACATTTCTCAGTCTGTACGATCCACGTCAAATCTCCTTCATCTAATGCAGCAATCGTCTTCAGCTCAGGCATCCTCTCTCTCTCTCTCTCGTTTGTGTTTTCTGAAGCTTCACGAGTTCATTCGAACGGTTTGATGATGATCTTGATCATATGAATAGATGATTGAATTTCCAAATCTTAATTGTTCGTTTTGTATCTTTTTCCATTTTCTAGCTTCAGTTAATTGAGAAATCACGTTATGTTTCGAGGAAAATTGTGTAATATTGTACGAACTTTGACTGTGCTTGAATTGTTTGCATCGAAGTCATAATTTCAAGTTTTCACTACCTTGGACAATTGAAGTGAAAGTTACCTCTGATTTTTAGATGGATTCAACTCTTGGAAGTTTTAGTCATATTGCTGAAGTGCTATTTTGTTTGAGATTTTTTGTTATTGCATTGCTTTCAGATTTTCGGTTCTGTCTTGTCTGCAGGCTCAGTTAACAAAGTTGCCAAAGAATCTTTTGGCGAAAGCATCTACTATGAAAAATACTGGGAAAGTATGTAGCATCAGTTAATAACTTCAGCATGTTCTTCTTTCGTTTATTTATTTCTTATCAATAAGACTTCTGATAGTACTTTCACTTCTGTTCTTGTGATGCAGATCTTAGAGCAGATGCCGCAAGTGGTTTCATCATTAGATGCATATGTTGAGAAGGGACTAGAAAGGTTCCTTTTTTACCTTGAACATGCATTGGTGGAATTAGTTCTATTTCTATGTTCAAATGTATAAAGCACATGGGTTATTTCTTTGGTGAAGAAACCAATGATTTTCGTTAGATTTGATGACAGTTATTGAAGTGCATAAGTAAATGCTTTGTTTTCCAGTGATATATTTATATTAAAGAACTTTCATGTTGAAATTGATACGTCTGAGACGGGAGGGGAGGCTT GAAGCTTCAGGCGACGCCAACAATGGCGACAGCTTCCCCATCAGGTCGAAGCAACAGGGATGGAACAGCAAAAGCCATGGTTGCCGACCACATTTCTCAGTCTGTACGATCCACGTCAAATCTCCTTCATCTAATGCAGCAATCGTCTTCAGCTCAGGCTCAGTTAACAAAGTTGCCAAAGAATCTTTTGGCGAAAGCATCTACTATGAAAAATACTGGGAAAATCTTAGAGCAGATGCCGCAAGTGGTTTCATCATTAGATGCATATGTTGAGAAGGGACTAGAAAGGTTCCTTTTTTACCTTGAACATGCATTGGTGGAATTAGTTCTATTTCTATGTTCAAATGTATAAAGCACATGGGTTATTTCTTTGGTGAAGAAACCAATGATTTTCGTTAGATTTGATGACAGTTATTGAAGTGCATAAGTAAATGCTTTGTTTTCCAGTGATATATTTATATTAAAGAACTTTCATGTTgaaattgatacgtctgagacgggaggggaggctt ATGGCGACAGCTTCCCCATCAGGTCGAAGCAACAGGGATGGAACAGCAAAAGCCATGGTTGCCGACCACATTTCTCAGTCTGTACGATCCACGTCAAATCTCCTTCATCTAATGCAGCAATCGTCTTCAGCTCAGGCTCAGTTAACAAAGTTGCCAAAGAATCTTTTGGCGAAAGCATCTACTATGAAAAATACTGGGAAAATCTTAGAGCAGATGCCGCAAGTGGTTTCATCATTAGATGCATATGTTGAGAAGGGACTAGAAAGGTTCCTTTTTTACCTTGAACATGCATTGGTGGAATTAGTTCTATTTCTATGTTCAAATGTATAA MATASPSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNTGKILEQMPQVVSSLDAYVEKGLERFLFYLEHALVELVLFLCSNV*
BLAST of Cucsa.313450 vs. Swiss-Prot
Match: TOM2B_ARATH (Tobamovirus multiplication protein 2B OS=Arabidopsis thaliana GN=TOM2B PE=2 SV=2) HSP 1 Score: 138.7 bits (348), Expect = 4.7e-32 Identity = 77/115 (66.96%), Postives = 91/115 (79.13%), Query Frame = 1
BLAST of Cucsa.313450 vs. TrEMBL
Match: A0A0A0LI80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G904110 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 1.2e-63 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 1
BLAST of Cucsa.313450 vs. TrEMBL
Match: V4VCD3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033051mg PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 2.0e-37 Identity = 86/126 (68.25%), Postives = 104/126 (82.54%), Query Frame = 1
BLAST of Cucsa.313450 vs. TrEMBL
Match: U5GN76_POPTR (Tobamovirus multiplication protein 2B OS=Populus trichocarpa GN=POPTR_0001s02840g PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 4.5e-37 Identity = 81/128 (63.28%), Postives = 106/128 (82.81%), Query Frame = 1
BLAST of Cucsa.313450 vs. TrEMBL
Match: A0A0K9RR13_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_038950 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 8.4e-36 Identity = 83/122 (68.03%), Postives = 98/122 (80.33%), Query Frame = 1
BLAST of Cucsa.313450 vs. TrEMBL
Match: M5WB21_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013291mg PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 7.1e-35 Identity = 81/124 (65.32%), Postives = 101/124 (81.45%), Query Frame = 1
BLAST of Cucsa.313450 vs. TAIR10
Match: AT1G32370.2 (AT1G32370.2 tobamovirus multiplication 2B) HSP 1 Score: 138.7 bits (348), Expect = 2.7e-33 Identity = 77/115 (66.96%), Postives = 91/115 (79.13%), Query Frame = 1
BLAST of Cucsa.313450 vs. NCBI nr
Match: gi|778688029|ref|XP_011652663.1| (PREDICTED: tobamovirus multiplication protein 2B [Cucumis sativus]) HSP 1 Score: 250.4 bits (638), Expect = 1.8e-63 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 1
BLAST of Cucsa.313450 vs. NCBI nr
Match: gi|659131950|ref|XP_008465939.1| (PREDICTED: tobamovirus multiplication protein 2B [Cucumis melo]) HSP 1 Score: 243.4 bits (620), Expect = 2.2e-61 Identity = 128/131 (97.71%), Postives = 129/131 (98.47%), Query Frame = 1
BLAST of Cucsa.313450 vs. NCBI nr
Match: gi|568864040|ref|XP_006485418.1| (PREDICTED: tobamovirus multiplication protein 2B isoform X1 [Citrus sinensis]) HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38 Identity = 87/129 (67.44%), Postives = 108/129 (83.72%), Query Frame = 1
BLAST of Cucsa.313450 vs. NCBI nr
Match: gi|802659512|ref|XP_012080851.1| (PREDICTED: tobamovirus multiplication protein 2B isoform X2 [Jatropha curcas]) HSP 1 Score: 164.1 bits (414), Expect = 1.7e-37 Identity = 91/143 (63.64%), Postives = 108/143 (75.52%), Query Frame = 1
BLAST of Cucsa.313450 vs. NCBI nr
Match: gi|1000949357|ref|XP_015579938.1| (PREDICTED: tobamovirus multiplication protein 2B [Ricinus communis]) HSP 1 Score: 164.1 bits (414), Expect = 1.7e-37 Identity = 85/120 (70.83%), Postives = 102/120 (85.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |