CsaV3_1G016990 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G016990
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptiontobamovirus multiplication protein 2B isoform X1
Locationchr1 : 11502331 .. 11505329 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGCAATCCAAGAAATGGCAAATCTGCTTTCCGTCGGAAGAAGCTTCAGGCGACGCAACAATGGCGACAGCTTCCCATCAGGTCGAAGCAACAGGGATGGAACAGCAAAAGCCATGGTTGCCGACCACATTTCTCAGTCTGTACGATCCACGTCAAATCTCCTTCATCTAATGCAGCAATCGTCTTCAGCTCAGGCATCCTCTCTCTCTCTCTCTCTCTCGTTTGTGTTTTCTGAAGCTTCACGAGTTCATTCGAACGGTTTGATGATGATCTTGATCATATGAATAGATGATTGAATTTCCAAATCTTAATTGTTCGTTTTGTATCTTTTTCCATTTTCTAGCTTCAGTTAATTGAGAAATCACGTTATGTTTCGAGGAAAATTGTGTAATATTGTACGAACTTTGACTGTGCTTGAATTGTTTGCATCGAAGTCATAATTTCAAGTTTTCACTACCTTGGACAATTGAAGTGAAAGTTACCTCTGATTTTTAGATGGATTCAACTCTTGGAAGTTTTAGTCATATTGCTGAAGTGCTATTTTGTTTGAGATTTTTTGCTATTGCATTGCTTTCAGATTTTCGGTTCTGTCTTGTCTGCAGGCTCAGTTAACAAAGTTGCCAAAGAATCTTTTGGCTAAAGCATCTACTATGAAAAATACTGGGAAAGTATGTAGCATCAGTTAATAACTTCAGCATGTTCTTCTTTCGTTTATTTATTTCTTATCAATAATACTTCTGATAGTACTTTCACTTCTCTTCTTGTGATGCAGATCTTAGAGCAGATGCCGCAGGTGGTTTCATCATTAGATGCATATGTTGAGAAGGGACTAGAAAGGTTCCTTTTTTACCTTGAACATGCATTGGTGGAATTAGTTCTATTTCTATGTTTAAATGTATAAAGCACATGGGTTATTTCTTTGGTGAAGAAACCAATGATTTTCGTTAGATTTGATGACAGTTATTGAAGTGCATAAGTAAATGCTTTGTTTTCCAGTGATATATTTATATTAAAGAACTTTCATGTTGAAATTGATACGTCTGAGACGGGAGGGGAGGCTTGATGATTCTCTGAAAGAGGAAGAGAGACTTTGATGGTGGAATTTGTTGAATTAATCAGGAAAGAGACCAGCAGCTGAAGGCAGAAGGCTAAGAATGCCATTTTGGCTAAAGGAGGGGATTGGAACTCAATCTTTCTTTCTTGGATGACTAGTGGTAGGAAAAGTAAGACCGTTGGCTTTATGCAAAGTGATAGCAGGGAGATTGTTTAGAAAGAGTAGGATATTGAGGAGAAGGTTCTTTTTAACCTCTATAGTTCAAAGGAGACTCCTGAGCTCTTTGTTCGTGGTATTGATTGGTCTTCTGTTTCTGAAAGGGAAGGGTTAGGTTGCTATCACCCTTTTCCTCGATTAGATTAGGAGAACAGTGTTTGAGTAAATTAATTTTCTGTAGTTAAGAGCATGATTTGAAGTGATTTTTGAACTTGACAAGAGTTAATTTAACCCTTTTAAACGCACTTCCTAAGCTGCCTTCAGAGTGCTAGGATTCTGCTATTGCCAATAAAACTACTTTCAAGGGAAAAAAATTCCTACATATTTCGTCTTAAAACAATATTTTCTTGATACTTTAGTCACTGTTGGCATAATTTTTGTTGGCCCAAAGGAATTGATATCAATGGATGACGCCTGATGACATTCTAGATAATCCATTGGACAGATATTTTTCACTATATTATCTGAACTCTGAATTATTACTCTGTTCTTGCCCTTTGGTATGTCTAGTAAAAGTTGCTTCTACTTTTACTCTATCCTCCGTTCTGTTCTGTCTACTGATCAATTTGGCTTCTGTCTTGATTTACTTATTTCCCATTATTTGCAGCATTCCTCGTTTGCAAACTGTGGTGCAATTACTTACAAACATGGAAAGCTCCCAGCTGAAATCTCTCTCTCAATTCCAACACCCTCAAGAGGTTCGACTTCTCCGACCTTTTTCCCCTCAGGTTGAGGGATTGCCTTGTTTTGTTCTATGGTAATTTGTTGACTCGATTTCTTATGTTCAATTGTTTCTCTCCCAGGAGAGCGAATCTCTTCCTCAACCGAAAGATGTGGACTAGCAATTCTGTCCTTCCAAAACATGTAAAGATAAGGCCATAAGAGTAAATACCCTAATCTTTTTCCTTCTTGTCCTTGGCTATAGGAATGGTACTATATATGTATCTGTTGTCTCAATTTCATTTGTTTAACCCCATTCAATTCATCGATTTCCGCTCATTAACCTAATTGTTTCCTGCATTTGAAATCTTATTAACTGCGATGCTGACCATGTGAAATGAAATTAATGAATTGACACATATCCATATATCATTTTGATTTTTGGCTGAACAGAGTGATGATATATTTTAAATTCTCACTTTTGTAGATCCTTGTAACAATTTATTTTCTCCATCTTAGATACTTGTATGAATTTGTTTTCCCATCTTAGATCCCTTTGTAAGAATTTATTTTCCTTTGTTGCATAATCGTATATGATCAAAATTTAGGGCCATATTGCAAATTTGCAATCATTTGGTTTGATTTTCGCTAATCCATTGATTGAATTTTGCATGTTTTGTTTTGTTTTTTCTTTTAAATTGATGCAGACATTCATTTACCAATTGTAAAGTGTGAAACTGATGAATCCCAATTGGATCAATCAATGAAGAACCAATTTTGGTTTGTGTGTTCAGTGCTTTCAACCATGGATTAAAATACCGTGTCATATCGATATCAAATTCAGGATATATTGATATCGAAGATAAGTCACAAAATTATTTAGATTAGTAACTTAGATAACATTTTTTTTTTAATGTTTTATGAACATTTATAAAGATGCGAGGGATATTGAACTTTTTGATTATATCAATATATATTCATATATCAGCGAACATTTTCGTCATTGCTTTTGTTGTAAGATATTTTCTAGGCAATCTATAAATATCTATTGAATGACATTAACTAAAAT

mRNA sequence

GCAATCCAAGAAATGGCAAATCTGCTTTCCGTCGGAAGAAGCTTCAGGCGACGCAACAATGGCGACAGCTTCCCATCAGGTCGAAGCAACAGGGATGGAACAGCAAAAGCCATGGTTGCCGACCACATTTCTCAGTCTGTACGATCCACGTCAAATCTCCTTCATCTAATGCAGCAATCGTCTTCAGCTCAGGCTCAGTTAACAAAGTTGCCAAAGAATCTTTTGGCTAAAGCATCTACTATGAAAAATACTGGGAAAATCTTAGAGCAGATGCCGCAGGTGGTTTCATCATTAGATGCATATGTTGAGAAGGGACTAGAAAGCATTCCTCGTTTGCAAACTGTGGTGCAATTACTTACAAACATGGAAAGCTCCCAGCTGAAATCTCTCTCTCAATTCCAACACCCTCAAGAGGAGAGCGAATCTCTTCCTCAACCGAAAGATGTGGACTAG

Coding sequence (CDS)

GCAATCCAAGAAATGGCAAATCTGCTTTCCGTCGGAAGAAGCTTCAGGCGACGCAACAATGGCGACAGCTTCCCATCAGGTCGAAGCAACAGGGATGGAACAGCAAAAGCCATGGTTGCCGACCACATTTCTCAGTCTGTACGATCCACGTCAAATCTCCTTCATCTAATGCAGCAATCGTCTTCAGCTCAGGCTCAGTTAACAAAGTTGCCAAAGAATCTTTTGGCTAAAGCATCTACTATGAAAAATACTGGGAAAATCTTAGAGCAGATGCCGCAGGTGGTTTCATCATTAGATGCATATGTTGAGAAGGGACTAGAAAGCATTCCTCGTTTGCAAACTGTGGTGCAATTACTTACAAACATGGAAAGCTCCCAGCTGAAATCTCTCTCTCAATTCCAACACCCTCAAGAGGAGAGCGAATCTCTTCCTCAACCGAAAGATGTGGACTAG

Protein sequence

AIQEMANLLSVGRSFRRRNNGDSFPSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNTGKILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESLPQPKDVD
Homology
[Close]
BLAST of CsaV3_1G016990 vs. NCBI nr
Match: XP_011652663.1 (PREDICTED: tobamovirus multiplication protein 2B [Cucumis sativus] >KGN60422.1 hypothetical protein Csa_3G904110 [Cucumis sativus])

HSP 1 Score: 230.3 bits (586), Expect = 4.2e-57
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0 

Query: 25  PSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNT 84
           PSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNT
Sbjct: 6   PSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNT 65

Query: 85  GKILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESLP 144
           GKILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESLP
Sbjct: 66  GKILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESLP 125

Query: 145 QPKDVD 151
           QPKDVD
Sbjct: 126 QPKDVD 131

[Close]
BLAST of CsaV3_1G016990 vs. NCBI nr
Match: XP_008465939.1 (PREDICTED: tobamovirus multiplication protein 2B isoform X1 [Cucumis melo])

HSP 1 Score: 223.4 bits (568), Expect = 5.2e-55
Identity = 123/126 (97.62%), Postives = 124/126 (98.41%), Query Frame = 0 

Query: 25  PSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNT 84
           PSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQL KLPKNLLAKASTM+NT
Sbjct: 6   PSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLRKLPKNLLAKASTMRNT 65

Query: 85  GKILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESLP 144
           GKILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESL 
Sbjct: 66  GKILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESLH 125

Query: 145 QPKDVD 151
           QPKDVD
Sbjct: 126 QPKDVD 131

[Close]
BLAST of CsaV3_1G016990 vs. NCBI nr
Match: XP_023553907.1 (tobamovirus multiplication protein 2B isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203.4 bits (516), Expect = 5.6e-49
Identity = 114/125 (91.20%), Postives = 118/125 (94.40%), Query Frame = 0 

Query: 26  SGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNTG 85
           SGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQL KLPKNLLAKAST+KNT 
Sbjct: 7   SGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLAKLPKNLLAKASTIKNTE 66

Query: 86  KILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESLPQ 145
           KILEQMPQVVSSLDAYVEKGLESIP LQTVVQLLTNMES+QLKSLSQ QHP+EE ES+ Q
Sbjct: 67  KILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQ 126

Query: 146 PKDVD 151
            KDVD
Sbjct: 127 LKDVD 131

[Close]
BLAST of CsaV3_1G016990 vs. NCBI nr
Match: XP_022952817.1 (tobamovirus multiplication protein 2B isoform X2 [Cucurbita moschata])

HSP 1 Score: 203.0 bits (515), Expect = 7.3e-49
Identity = 114/125 (91.20%), Postives = 117/125 (93.60%), Query Frame = 0 

Query: 26  SGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNTG 85
           SGRSNRDGTAK MVADHISQSVRSTSNLLHLMQQSSSAQAQL KLPKNLLAKAST+KNT 
Sbjct: 7   SGRSNRDGTAKGMVADHISQSVRSTSNLLHLMQQSSSAQAQLAKLPKNLLAKASTIKNTE 66

Query: 86  KILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESLPQ 145
           KILEQMPQVVSSLDAYVEKGLESIP LQTVVQLLTNMES+QLKSLSQ QHP+EE ESL Q
Sbjct: 67  KILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESLHQ 126

Query: 146 PKDVD 151
            KDVD
Sbjct: 127 LKDVD 131

[Close]
BLAST of CsaV3_1G016990 vs. NCBI nr
Match: XP_022972007.1 (tobamovirus multiplication protein 2B isoform X2 [Cucurbita maxima])

HSP 1 Score: 201.1 bits (510), Expect = 2.8e-48
Identity = 113/125 (90.40%), Postives = 117/125 (93.60%), Query Frame = 0 

Query: 26  SGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNTG 85
           SGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQL KLPKNLLAKAST+KNT 
Sbjct: 9   SGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLAKLPKNLLAKASTIKNTE 68

Query: 86  KILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESLPQ 145
           KILEQMPQVVSSLDA+VEKGLESIP LQTVVQLLTNME +QLKSLSQ QHP+EE ESL Q
Sbjct: 69  KILEQMPQVVSSLDAHVEKGLESIPHLQTVVQLLTNMEGTQLKSLSQIQHPKEEIESLHQ 128

Query: 146 PKDVD 151
            KDVD
Sbjct: 129 LKDVD 133

[Close]
BLAST of CsaV3_1G016990 vs. TAIR10
Match: AT1G32370.2 (tobamovirus multiplication 2B)

HSP 1 Score: 125.6 bits (314), Expect = 2.7e-29
Identity = 72/106 (67.92%), Postives = 85/106 (80.19%), Query Frame = 0 

Query: 27  GRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNTGK 86
           G S  D TAKA+VAD ISQ+V ST+NLLHLM+QSSS+QAQL KLPKNLLAKAS  K TG+
Sbjct: 10  GISGGDRTAKAVVADQISQAVNSTANLLHLMRQSSSSQAQLAKLPKNLLAKASLTKATGQ 69

Query: 87  ILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQ 133
            L Q+PQV+SSLDA++E GL S   L TV QLL NMES+QL++L Q
Sbjct: 70  ALAQLPQVISSLDAHIESGLHSGVHLNTVTQLLENMESTQLRALRQ 115

[Close]
BLAST of CsaV3_1G016990 vs. Swiss-Prot
Match: sp|Q8H960|TOM2B_ARATH (Tobamovirus multiplication protein 2B OS=Arabidopsis thaliana OX=3702 GN=TOM2B PE=2 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 4.8e-28
Identity = 72/106 (67.92%), Postives = 85/106 (80.19%), Query Frame = 0 

Query: 27  GRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNTGK 86
           G S  D TAKA+VAD ISQ+V ST+NLLHLM+QSSS+QAQL KLPKNLLAKAS  K TG+
Sbjct: 10  GISGGDRTAKAVVADQISQAVNSTANLLHLMRQSSSSQAQLAKLPKNLLAKASLTKATGQ 69

Query: 87  ILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQ 133
            L Q+PQV+SSLDA++E GL S   L TV QLL NMES+QL++L Q
Sbjct: 70  ALAQLPQVISSLDAHIESGLHSGVHLNTVTQLLENMESTQLRALRQ 115

[Close]
BLAST of CsaV3_1G016990 vs. TrEMBL
Match: tr|A0A0A0LI80|A0A0A0LI80_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G904110 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.8e-57
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0 

Query: 25  PSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNT 84
           PSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNT
Sbjct: 6   PSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNT 65

Query: 85  GKILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESLP 144
           GKILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESLP
Sbjct: 66  GKILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESLP 125

Query: 145 QPKDVD 151
           QPKDVD
Sbjct: 126 QPKDVD 131

[Close]
BLAST of CsaV3_1G016990 vs. TrEMBL
Match: tr|A0A1S3CRH1|A0A1S3CRH1_CUCME (tobamovirus multiplication protein 2B isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503510 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 3.4e-55
Identity = 123/126 (97.62%), Postives = 124/126 (98.41%), Query Frame = 0 

Query: 25  PSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNT 84
           PSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQL KLPKNLLAKASTM+NT
Sbjct: 6   PSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLRKLPKNLLAKASTMRNT 65

Query: 85  GKILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESLP 144
           GKILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESL 
Sbjct: 66  GKILEQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESLH 125

Query: 145 QPKDVD 151
           QPKDVD
Sbjct: 126 QPKDVD 131

[Close]
BLAST of CsaV3_1G016990 vs. TrEMBL
Match: tr|A0A1S4E5I1|A0A1S4E5I1_CUCME (tobamovirus multiplication protein 2B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503510 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.2e-33
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0 

Query: 25  PSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNT 84
           PSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQL KLPKNLLAKASTM+NT
Sbjct: 6   PSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLRKLPKNLLAKASTMRNT 65

Query: 85  GKILEQMPQVVSSLDAYVEKGLES 109
           GKILEQMPQVVSSLDAYVEKGLES
Sbjct: 66  GKILEQMPQVVSSLDAYVEKGLES 89

[Close]
BLAST of CsaV3_1G016990 vs. TrEMBL
Match: tr|A0A251J7V6|A0A251J7V6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G174500 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.8e-33
Identity = 84/121 (69.42%), Postives = 101/121 (83.47%), Query Frame = 0 

Query: 29  SNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNTGKIL 88
           S R+  AKAMVA+ ISQ+V+STSNLLHLMQQSS++QAQL KLPKNLLAKAS +KNTG++L
Sbjct: 25  STREDIAKAMVAEQISQAVQSTSNLLHLMQQSSASQAQLMKLPKNLLAKASVVKNTGQVL 84

Query: 89  EQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESLPQPKD 148
           EQMP+V+SSLDA++E GLES+P L+TVVQLL NMES QL   SQ   PQEE+E   QP +
Sbjct: 85  EQMPRVISSLDAHMENGLESVPHLRTVVQLLANMESCQLNFASQAPLPQEETELPNQPSE 144

Query: 149 V 150
           V
Sbjct: 145 V 145

[Close]
BLAST of CsaV3_1G016990 vs. TrEMBL
Match: tr|V4VCD3|V4VCD3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033051mg PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.7e-33
Identity = 82/118 (69.49%), Postives = 99/118 (83.90%), Query Frame = 0 

Query: 29  SNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQAQLTKLPKNLLAKASTMKNTGKIL 88
           S+R+GTAKAMV D ISQ+++STSNLLHLMQQSS +Q QLTKLPKNLLAK + +KNTG++L
Sbjct: 13  SSREGTAKAMVFDQISQTIQSTSNLLHLMQQSSPSQVQLTKLPKNLLAKTTMIKNTGQVL 72

Query: 89  EQMPQVVSSLDAYVEKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEESESLPQP 147
           EQMPQV+SSLDA+VE GL+S+P L+TV QLL NMES QL SLSQ   P++E E   QP
Sbjct: 73  EQMPQVISSLDAHVENGLQSVPHLRTVSQLLANMESCQLSSLSQAHLPEKEPEMGKQP 130

The following BLAST results are available for this feature:
BLAST of CsaV3_1G016990 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011652663.14.2e-57100.00PREDICTED: tobamovirus multiplication protein 2B [Cucumis sativus] >KGN60422.1 h... [more]
XP_008465939.15.2e-5597.62PREDICTED: tobamovirus multiplication protein 2B isoform X1 [Cucumis melo][more]
XP_023553907.15.6e-4991.20tobamovirus multiplication protein 2B isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022952817.17.3e-4991.20tobamovirus multiplication protein 2B isoform X2 [Cucurbita moschata][more]
XP_022972007.12.8e-4890.40tobamovirus multiplication protein 2B isoform X2 [Cucurbita maxima][more]
BLAST of CsaV3_1G016990 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G32370.22.7e-2967.92tobamovirus multiplication 2B[more]
BLAST of CsaV3_1G016990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8H960|TOM2B_ARATH4.8e-2867.92Tobamovirus multiplication protein 2B OS=Arabidopsis thaliana OX=3702 GN=TOM2B P... [more]
BLAST of CsaV3_1G016990 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LI80|A0A0A0LI80_CUCSA2.8e-57100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G904110 PE=4 SV=1[more]
tr|A0A1S3CRH1|A0A1S3CRH1_CUCME3.4e-5597.62tobamovirus multiplication protein 2B isoform X1 OS=Cucumis melo OX=3656 GN=LOC1... [more]
tr|A0A1S4E5I1|A0A1S4E5I1_CUCME2.2e-3397.62tobamovirus multiplication protein 2B isoform X2 OS=Cucumis melo OX=3656 GN=LOC1... [more]
tr|A0A251J7V6|A0A251J7V6_MANES2.8e-3369.42Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G174500 PE=4 SV=... [more]
tr|V4VCD3|V4VCD3_9ROSI3.7e-3369.49Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033051mg PE=4 ... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0046786 viral replication complex formation and maintenance
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G016990.1CsaV3_1G016990.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..150

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G016990CSPI03G47050Wild cucumber (PI 183967)cpicucB127
CsaV3_1G016990Cucsa.313450Cucumber (Gy14) v1cgycucB482
CsaV3_1G016990CmaCh19G004450Cucurbita maxima (Rimu)cmacucB0603
CsaV3_1G016990CmoCh19G004570Cucurbita moschata (Rifu)cmocucB0589
CsaV3_1G016990Cp4.1LG15g03430Cucurbita pepo (Zucchini)cpecucB0288
CsaV3_1G016990CsGy3G044440Cucumber (Gy14) v2cgybcucB103
CsaV3_1G016990Cla016151Watermelon (97103) v1cucwmB002
CsaV3_1G016990MELO3C003378Melon (DHL92) v3.5.1cucmeB071
CsaV3_1G016990ClCG09G012310Watermelon (Charleston Gray)cucwcgB001
CsaV3_1G016990Lsi05G000560Bottle gourd (USVL1VR-Ls)cuclsiB066
CsaV3_1G016990MELO3C003378.2Melon (DHL92) v3.6.1cucmedB067
CsaV3_1G016990Cla97C09G175140Watermelon (97103) v2cucwmbB091
CsaV3_1G016990BhiUN793G7Wax gourdcucwgoB078
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_1G016990CsaV3_3G049460Cucumber (Chinese Long) v3cuccucB019
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G016990Cucumber (Chinese Long) v3cuccucB056
CsaV3_1G016990Silver-seed gourdcarcucB0056
CsaV3_1G016990Silver-seed gourdcarcucB1084
CsaV3_1G016990Cucurbita moschata (Rifu)cmocucB0679
CsaV3_1G016990Cucumber (Gy14) v2cgybcucB002
CsaV3_1G016990Cucumber (Gy14) v1cgycucB290
CsaV3_1G016990Cucurbita maxima (Rimu)cmacucB0241
CsaV3_1G016990Cucurbita maxima (Rimu)cmacucB0255
CsaV3_1G016990Cucurbita maxima (Rimu)cmacucB0476
CsaV3_1G016990Cucurbita moschata (Rifu)cmocucB0228
CsaV3_1G016990Cucurbita moschata (Rifu)cmocucB0241
CsaV3_1G016990Cucurbita moschata (Rifu)cmocucB0459
CsaV3_1G016990Cucurbita pepo (Zucchini)cpecucB0021
CsaV3_1G016990Cucurbita pepo (Zucchini)cpecucB0629
CsaV3_1G016990Cucurbita pepo (Zucchini)cpecucB0876
CsaV3_1G016990Wild cucumber (PI 183967)cpicucB001
CsaV3_1G016990Bottle gourd (USVL1VR-Ls)cuclsiB033
CsaV3_1G016990Melon (DHL92) v3.5.1cucmeB014
CsaV3_1G016990Melon (DHL92) v3.6.1cucmedB025
CsaV3_1G016990Watermelon (Charleston Gray)cucwcgB024
CsaV3_1G016990Watermelon (97103) v1cucwmB057
CsaV3_1G016990Watermelon (97103) v2cucwmbB008
CsaV3_1G016990Wax gourdcucwgoB039