Cucsa.313380 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.313380
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionGlycine cleavage system h protein
Locationscaffold02995 : 2552033 .. 2554362 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAAAAAAATGGAAAAAAGGAAAAAGCAGTGTATAGATTAGGCAGTCACTGCCCACCATCCATCGAAGATAAAGCAATGTCGTAAAACTCAAGTTTCAAACATTTCTTTTATTCTTTGCTGTTACCAAAACAGAGAAGGAAGAACAACAAAACACAGCAAATTAAACACACTCACAAAAAAATAGCTATGGCTCTTAGAATGTGGGCTTCTTCTACTGCTAATGCACTCAAACTCTCTTCTTCATCTAAAACCCATCTCTCTCCTTCATTCTCTCTCTCCAGATGCTTCTCCACTGGTAACTTTTTGCTCTTTCCTATTTTGCATGTAAACTGTTTGGGTGCATGTCTCTGTGAAGTTTGGGTTTGTTTTCTACTCTCTTGGATGTTGTTCAATTCTCAATTATTTTTTGATTTCTTATCTGGGTATAATGAAAGTGGGGTTTTTTAATTTTCCTTATTGGTTGGATTTGTAGTTTTGGATGGGCTGAAGTATGCTTCTTCACATGAGTGGGTGAAGCATGAAGGCTCTGTTGCTACCGTTGGCATCACTGACCATGCTCAGGTGCTTTCTATTTTTTCCATGAAATTTATCATTTTTCAAATAATGTAACTCTTGTTTGCCTAAATTTTTTGGTGAAATTGTAAGTTTGAGACATGAACTTTTAGAATTGTGTCTATTGAGTCTTGTTATTTGAGAAGTTTGTAATAAATCTTTTAAGCCTCTCTTCCTTTTCAATTTTCTGTCTTATAGGCTTACATTGCTAACTTCGCTACTTTAATGGCGACGTGATAGGTTGACTACAACGGTTGCATTGAAAATCAATCTGTGTCATGTTAATGTCAAACGAATTTATTGTTGGGCCATATTGGAACAAAATTGAATGTTTTGAGATCTGTTAGACACTTCTTAAAAATATGGTAGTAATGAGACCCAATGACTGAGCTTTATAATTTTACCTAAATTTTCCTACTTCGAATGATGTTTGGATAAGAAAACTTGATAGTTACACAATTCCTTTTGCTGTTACTCCCTCTAGCCATGGAAAGTAATTCAAGCTTTTTGTATAACAACTGTTACATCACTCCATGATAGAAATTTTGCATTTACTGTACTTGGTATTCAAACTTGGGTTGGAAGCATTTTGTTTTCATGCATCTTAACAGGATCATCTGGGAGAAGTGGTGTTCGTGGATCTGCCAGAATCAGGTAGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCAACTAGTGATATCAACTCTCCAATCTCTGGTGAGATTGTTGAAGTTAACCCACAGCTTAAGGAATCTCCTGGTTTGGTAATTCCAAATCCTCATATATTTTTTTTCTAATTCCTTGGACTTCGCATTTGCTTCATAAACTGTTGTATCGTTTTCATTTGTGGGCTTCCATTCCATCATTTTCAATTTGGTCCATGTGCTTCTTTCAAATGTACTTAGTCTAGTTTTGTACCTGCGTAATCAGATTTTTAACATTTGGATTAGGTTATCAGGTTCGAAAAACTGTAGAGATTAAATGAAACAAAAGAGAGCATAGAAAACTACATCTTACGAAAAGATGTAAATGTTGAAATGTCTTGAATCTGCTTTGTGCTCTTAACGACTAGACGTGGGGTCGCACTTATTTGATATATTCCTCTTTAAACAATAAAAATTACTCTCTTCCTCTGTTCATAGACATAGCTAACACACTCTCACTGAACCACGTAAACCTCTGTGTCAATTTCTTCAAGTTATTTATTTTTTGTTTGTCGATTTTGTTTCTGTCATAAACAAGTAAGTTATTGATTTATTTACTTCCATGTTCATGAAATGAAGATCAATTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAGCCAAGCAATCCAGGTGAATTAGATTCTTTGCTCGGTCCAAAGGAATATACAAAGTTTTGTGAGGAAGAAGATGCAGCCCACTAAAGCTGAACAAACGAATGTTTCATCTCCAAACAGAGCTTAAGCTAATTCCTTTCCAAAGCTGGTTGAATTGTTGACATATCACAAGCTATTTCTATGAAGAAAGAGAGCCAAAAAATAATTACAAGTTCATTGTGAGTTGAAATGTGCCTAAGCATCTGAACTACATTCTTTCTTCAATGTTTATTCCACTTGAAATTAATTGAATTTCTTTGCCTTATTTTTAGCCATTAGTTCTTCAGTATGCTGAATTTGATTGAATTCACACAGCACAAACCCTTTTAACTTTAGAAGTTTATATACATTTGGTTCTTGAAGTTTCAAAATGAATATTTTAGCAAGTTTGAG

mRNA sequence

AGAAAAAAAAATGGAAAAAAGGAAAAAGCAGTGTATAGATTAGGCAGTCACTGCCCACCATCCATCGAAGATAAAGCAATGTCGTAAAACTCAAGTTTCAAACATTTCTTTTATTCTTTGCTGTTACCAAAACAGAGAAGGAAGAACAACAAAACACAGCAAATTAAACACACTCACAAAAAAATAGCTATGGCTCTTAGAATGTGGGCTTCTTCTACTGCTAATGCACTCAAACTCTCTTCTTCATCTAAAACCCATCTCTCTCCTTCATTCTCTCTCTCCAGATGCTTCTCCACTGTTTTGGATGGGCTGAAGTATGCTTCTTCACATGAGTGGGTGAAGCATGAAGGCTCTGTTGCTACCGTTGGCATCACTGACCATGCTCAGGATCATCTGGGAGAAGTGGTGTTCGTGGATCTGCCAGAATCAGGTAGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCAACTAGTGATATCAACTCTCCAATCTCTGGTGAGATTGTTGAAGTTAACCCACAGCTTAAGGAATCTCCTGGTTTGATCAATTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAGCCAAGCAATCCAGGTGAATTAGATTCTTTGCTCGGTCCAAAGGAATATACAAAGTTTTGTGAGGAAGAAGATGCAGCCCACTAAAGCTGAACAAACGAATGTTTCATCTCCAAACAGAGCTTAAGCTAATTCCTTTCCAAAGCTGGTTGAATTGTTGACATATCACAAGCTATTTCTATGAAGAAAGAGAGCCAAAAAATAATTACAAGTTCATTGTGAGTTGAAATGTGCCTAAGCATCTGAACTACATTCTTTCTTCAATGTTTATTCCACTTGAAATTAATTGAATTTCTTTGCCTTATTTTTAGCCATTAGTTCTTCAGTATGCTGAATTTGATTGAattcacacagcacaaacccttttaactttagaagtttatatacatttggttcttgaagtttcaaaatgaatattttagcaagtttgag

Coding sequence (CDS)

ATGGCTCTTAGAATGTGGGCTTCTTCTACTGCTAATGCACTCAAACTCTCTTCTTCATCTAAAACCCATCTCTCTCCTTCATTCTCTCTCTCCAGATGCTTCTCCACTGTTTTGGATGGGCTGAAGTATGCTTCTTCACATGAGTGGGTGAAGCATGAAGGCTCTGTTGCTACCGTTGGCATCACTGACCATGCTCAGGATCATCTGGGAGAAGTGGTGTTCGTGGATCTGCCAGAATCAGGTAGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCAACTAGTGATATCAACTCTCCAATCTCTGGTGAGATTGTTGAAGTTAACCCACAGCTTAAGGAATCTCCTGGTTTGATCAATTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAGCCAAGCAATCCAGGTGAATTAGATTCTTTGCTCGGTCCAAAGGAATATACAAAGTTTTGTGAGGAAGAAGATGCAGCCCACTAA

Protein sequence

MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKESPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH*
Homology
[Close]
BLAST of Cucsa.313380 vs. Swiss-Prot
Match: GCSH_PEA (Glycine cleavage system H protein, mitochondrial OS=Pisum sativum GN=GDCSH PE=1 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 3.0e-76
Identity = 137/165 (83.03%), Postives = 151/165 (91.52%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALKLSSSS+ HLSP+FS+SRCFS VLDGLKYA SHEWVKHEGSVAT+G
Sbjct: 1   MALRMWASSTANALKLSSSSRLHLSPTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFV+LPE G SV++GK FGAVESVKATSD+NSPISGE++EVN  L   
Sbjct: 61  ITDHAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGK 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYE GWMIK+KP++P EL+SLLG KEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEDGWMIKIKPTSPDELESLLGAKEYTKFCEEEDAAH 165

[Close]
BLAST of Cucsa.313380 vs. Swiss-Prot
Match: GCSH3_ARATH (Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana GN=GDH3 PE=1 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 6.7e-76
Identity = 139/166 (83.73%), Postives = 157/166 (94.58%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSS-SKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60
           MALRMWASSTANALKLSSS SK+HL P+FS+SRCFS+VL+GLKYA+SHEWVKHEGSVAT+
Sbjct: 1   MALRMWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120
           GITDHAQDHLGEVVFV+LPE+ SSVS+ KSFGAVESVKATS+I SPISGE++EVN +L E
Sbjct: 61  GITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTE 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           SPGLINSSPYE GWMIKVKPS+P EL++L+GPKEYTKFCEEEDAAH
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166

[Close]
BLAST of Cucsa.313380 vs. Swiss-Prot
Match: GCSH_FLAAN (Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala GN=GDCSH PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 5.7e-75
Identity = 137/165 (83.03%), Postives = 151/165 (91.52%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANAL+LSS+++ H SP   LSRCFS+VLDGLKYA+SHEWVKHEGSVAT+G
Sbjct: 1   MALRMWASSTANALRLSSATRPHFSP---LSRCFSSVLDGLKYANSHEWVKHEGSVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPE+G SV++   FGAVESVKATSD+NSPISGEIVEVN +L E+
Sbjct: 61  ITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSET 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYE GWMIKVKPSNP ELDSL+G KEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDAAH 162

[Close]
BLAST of Cucsa.313380 vs. Swiss-Prot
Match: GCSH1_ARATH (Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana GN=GDH1 PE=1 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.2e-74
Identity = 141/166 (84.94%), Postives = 154/166 (92.77%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSS-SKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60
           MALRMWASSTANALKLSSS SK+HLSP FS SRCFSTVL+GLKYA+SHEWVKHEGSVAT+
Sbjct: 1   MALRMWASSTANALKLSSSVSKSHLSP-FSFSRCFSTVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120
           GIT HAQDHLGEVVFV+LPE  +SVS+ KSFGAVESVKATS+I SPISGEI+EVN +L E
Sbjct: 61  GITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTE 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           SPGLINSSPYE GWMIKVKPS+P EL+SL+GPKEYTKFCEEEDAAH
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165

[Close]
BLAST of Cucsa.313380 vs. Swiss-Prot
Match: GCSH_FLAPR (Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei GN=GDCSH PE=2 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 3.7e-74
Identity = 135/165 (81.82%), Postives = 151/165 (91.52%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALR+WASSTANAL+LSS+++ H SP   LSRCFS+VLDGLKYA+SHEWVKHEGSVAT+G
Sbjct: 1   MALRIWASSTANALRLSSATRPHFSP---LSRCFSSVLDGLKYANSHEWVKHEGSVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPE+G SV++   FGAVESVKATSD+NSPISGEIVEVN +L E+
Sbjct: 61  ITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSET 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYE GWMIKVKPSNP ELDSL+G KEYTKFCEEED+AH
Sbjct: 121 PGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDSAH 162

[Close]
BLAST of Cucsa.313380 vs. TrEMBL
Match: A0A0A0LI67_CUCSA (Glycine cleavage system h protein OS=Cucumis sativus GN=Csa_3G903520 PE=3 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 3.1e-88
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG
Sbjct: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 165

[Close]
BLAST of Cucsa.313380 vs. TrEMBL
Match: A0A061GAI7_THECC (Single hybrid motif superfamily protein OS=Theobroma cacao GN=TCM_015756 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 6.5e-78
Identity = 142/165 (86.06%), Postives = 156/165 (94.55%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALK+S +SK HLSP+FSLSRCFSTVLDGLKYA+SHEWVKHEGSVAT+G
Sbjct: 1   MALRMWASSTANALKISCASKAHLSPAFSLSRCFSTVLDGLKYANSHEWVKHEGSVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPE G SVSQGK FGAVESVKATSD+NSPISGE+VEVN +L E+
Sbjct: 61  ITDHAQDHLGEVVFVDLPEPGGSVSQGKGFGAVESVKATSDVNSPISGEVVEVNSKLTEA 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYE GW+IKVKPS+P EL+SL+GPKEYTKFCEEEDA+H
Sbjct: 121 PGLINSSPYEDGWIIKVKPSSPSELESLMGPKEYTKFCEEEDASH 165

[Close]
BLAST of Cucsa.313380 vs. TrEMBL
Match: A5BA00_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038357 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.2e-76
Identity = 140/165 (84.85%), Postives = 154/165 (93.33%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANAL++S +SK H+SP+FSLSRCFS+VLDGLKYA+SHEWVKHEGSVAT+G
Sbjct: 1   MALRMWASSTANALRVSCASKAHVSPAFSLSRCFSSVLDGLKYATSHEWVKHEGSVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFV+LPE G SVS+G  FGAVESVKATSDINSPISGE+VEVN +L ES
Sbjct: 61  ITDHAQDHLGEVVFVELPEPGGSVSKGNGFGAVESVKATSDINSPISGEVVEVNSKLSES 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYE GWMIKVKP NP EL+SL+GPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEDGWMIKVKPGNPSELESLMGPKEYTKFCEEEDAAH 165

[Close]
BLAST of Cucsa.313380 vs. TrEMBL
Match: D7TTY4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g01120 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.1e-76
Identity = 138/165 (83.64%), Postives = 155/165 (93.94%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANAL++S +SK H+SP+FSLSRCFS+VLDGLKYA+SHEWVKHEGSVAT+G
Sbjct: 1   MALRMWASSTANALRVSCASKAHVSPAFSLSRCFSSVLDGLKYATSHEWVKHEGSVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFV++PE G SVS+G  FGAVESVKATSD+NSPISGE+VEVN +L E+
Sbjct: 61  ITDHAQDHLGEVVFVEIPEPGGSVSKGNGFGAVESVKATSDVNSPISGEVVEVNSKLSEA 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYE GWMIKVKPSNP EL+SL+GPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEDGWMIKVKPSNPSELESLMGPKEYTKFCEEEDAAH 165

[Close]
BLAST of Cucsa.313380 vs. TrEMBL
Match: M5WVV1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012546mg PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 6.1e-76
Identity = 140/165 (84.85%), Postives = 154/165 (93.33%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANAL++SS+SK HLSP+FS SRCFS+VL+GLKYASSHEWVKHEGSVAT+G
Sbjct: 1   MALRMWASSTANALRISSASKAHLSPAFSFSRCFSSVLEGLKYASSHEWVKHEGSVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFV+LPE+G SVS G  FGAVESVKATSDINSPISG++VEVN +L ES
Sbjct: 61  ITDHAQDHLGEVVFVELPEAGRSVSAGVGFGAVESVKATSDINSPISGDVVEVNSKLTES 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYE GWMIK+KPSNP EL+SLLG KEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEDGWMIKIKPSNPSELESLLGAKEYTKFCEEEDAAH 165

[Close]
BLAST of Cucsa.313380 vs. TAIR10
Match: AT1G32470.1 (AT1G32470.1 Single hybrid motif superfamily protein)

HSP 1 Score: 284.6 bits (727), Expect = 3.8e-77
Identity = 139/166 (83.73%), Postives = 157/166 (94.58%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSS-SKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60
           MALRMWASSTANALKLSSS SK+HL P+FS+SRCFS+VL+GLKYA+SHEWVKHEGSVAT+
Sbjct: 1   MALRMWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120
           GITDHAQDHLGEVVFV+LPE+ SSVS+ KSFGAVESVKATS+I SPISGE++EVN +L E
Sbjct: 61  GITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTE 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           SPGLINSSPYE GWMIKVKPS+P EL++L+GPKEYTKFCEEEDAAH
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166

[Close]
BLAST of Cucsa.313380 vs. TAIR10
Match: AT2G35370.1 (AT2G35370.1 glycine decarboxylase complex H)

HSP 1 Score: 279.6 bits (714), Expect = 1.2e-75
Identity = 141/166 (84.94%), Postives = 154/166 (92.77%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSS-SKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60
           MALRMWASSTANALKLSSS SK+HLSP FS SRCFSTVL+GLKYA+SHEWVKHEGSVAT+
Sbjct: 1   MALRMWASSTANALKLSSSVSKSHLSP-FSFSRCFSTVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120
           GIT HAQDHLGEVVFV+LPE  +SVS+ KSFGAVESVKATS+I SPISGEI+EVN +L E
Sbjct: 61  GITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTE 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           SPGLINSSPYE GWMIKVKPS+P EL+SL+GPKEYTKFCEEEDAAH
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165

[Close]
BLAST of Cucsa.313380 vs. TAIR10
Match: AT2G35120.1 (AT2G35120.1 Single hybrid motif superfamily protein)

HSP 1 Score: 201.1 bits (510), Expect = 5.5e-52
Identity = 104/166 (62.65%), Postives = 128/166 (77.11%), Query Frame = 1 

Query: 1   MALRM-WASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60
           MA R+ WAS  A+ L++S + +      FS     S VL  LKYA SHEWVK +G+ AT 
Sbjct: 1   MACRLFWASRVASHLRISVAQR-----GFS-----SVVLKDLKYADSHEWVKIDGNKATF 60

Query: 61  GITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120
           GITDHAQDHLG+VV+V+LP+ G SVSQGKSFGAVESVKATSDINSP+SG++VEVN +L E
Sbjct: 61  GITDHAQDHLGDVVYVELPDVGHSVSQGKSFGAVESVKATSDINSPVSGKVVEVNEELTE 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           SPGL+NSSPYE GW+IKV+ S+ GE + L+   +Y+KFCEEEDA H
Sbjct: 121 SPGLVNSSPYEQGWIIKVELSDAGEAEKLMDSDKYSKFCEEEDAKH 156

[Close]
BLAST of Cucsa.313380 vs. NCBI nr
Match: gi|449461527|ref|XP_004148493.1| (PREDICTED: glycine cleavage system H protein 3, mitochondrial [Cucumis sativus])

HSP 1 Score: 332.4 bits (851), Expect = 4.5e-88
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG
Sbjct: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 165

[Close]
BLAST of Cucsa.313380 vs. NCBI nr
Match: gi|659131962|ref|XP_008465945.1| (PREDICTED: glycine cleavage system H protein, mitochondrial [Cucumis melo])

HSP 1 Score: 331.3 bits (848), Expect = 1.0e-87
Identity = 164/165 (99.39%), Postives = 165/165 (100.00%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG
Sbjct: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE+
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 165

[Close]
BLAST of Cucsa.313380 vs. NCBI nr
Match: gi|694396308|ref|XP_009373439.1| (PREDICTED: glycine cleavage system H protein 3, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 302.8 bits (774), Expect = 3.8e-79
Identity = 144/165 (87.27%), Postives = 160/165 (96.97%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALR+WASSTANAL++S++SK+HLSP+FSLSRCFSTVLDGLKYASSHEWVKHEGSVAT+G
Sbjct: 1   MALRLWASSTANALRISTASKSHLSPAFSLSRCFSTVLDGLKYASSHEWVKHEGSVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFV+LPE+G SVSQG SFGAVESVKATSD+NSPISGE+VEVN +L ES
Sbjct: 61  ITDHAQDHLGEVVFVELPEAGRSVSQGGSFGAVESVKATSDVNSPISGEVVEVNSKLTES 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIK+KPS+P EL+SLLGPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKIKPSSPSELESLLGPKEYTKFCEEEDAAH 165

[Close]
BLAST of Cucsa.313380 vs. NCBI nr
Match: gi|694408602|ref|XP_009378975.1| (PREDICTED: glycine cleavage system H protein 3, mitochondrial [Pyrus x bretschneideri])

HSP 1 Score: 301.2 bits (770), Expect = 1.1e-78
Identity = 144/165 (87.27%), Postives = 159/165 (96.36%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALR+WASSTANAL++S++SK+HLSP+FSLSRCFSTVLDGLKYASSHEWVKHEGSVAT+G
Sbjct: 1   MALRLWASSTANALRISTASKSHLSPAFSLSRCFSTVLDGLKYASSHEWVKHEGSVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFV+LPESG SVSQG SFGAVESVKATSD+NSPISGE+VEVN +L ES
Sbjct: 61  ITDHAQDHLGEVVFVELPESGRSVSQGGSFGAVESVKATSDVNSPISGEVVEVNSKLTES 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYE GWMIK+KPS+P EL+SLLGPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEDGWMIKIKPSSPSELESLLGPKEYTKFCEEEDAAH 165

[Close]
BLAST of Cucsa.313380 vs. NCBI nr
Match: gi|658011635|ref|XP_008341065.1| (PREDICTED: glycine cleavage system H protein 3, mitochondrial-like [Malus domestica])

HSP 1 Score: 300.1 bits (767), Expect = 2.5e-78
Identity = 143/165 (86.67%), Postives = 159/165 (96.36%), Query Frame = 1 

Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALR+WASSTANAL++S++SK+HLSP+FSLSRCFSTVLDGLKYASSHEWVKHEGSVAT+G
Sbjct: 1   MALRLWASSTANALRISTASKSHLSPAFSLSRCFSTVLDGLKYASSHEWVKHEGSVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFV+LPESG SVSQG SFGAVESVKATSD+NSPISG++VEVN +L ES
Sbjct: 61  ITDHAQDHLGEVVFVELPESGRSVSQGGSFGAVESVKATSDVNSPISGQVVEVNSKLTES 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYE GWMIK+KPS+P EL+SLLGPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEDGWMIKIKPSSPSELESLLGPKEYTKFCEEEDAAH 165

The following BLAST results are available for this feature:
BLAST of Cucsa.313380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GCSH_PEA3.0e-7683.03Glycine cleavage system H protein, mitochondrial OS=Pisum sativum GN=GDCSH PE=1 ... [more]
GCSH3_ARATH6.7e-7683.73Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana GN=GD... [more]
GCSH_FLAAN5.7e-7583.03Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala GN=GDCSH PE... [more]
GCSH1_ARATH2.2e-7484.94Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana GN=GD... [more]
GCSH_FLAPR3.7e-7481.82Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei GN=GDCSH P... [more]
BLAST of Cucsa.313380 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LI67_CUCSA3.1e-88100.00Glycine cleavage system h protein OS=Cucumis sativus GN=Csa_3G903520 PE=3 SV=1[more]
A0A061GAI7_THECC6.5e-7886.06Single hybrid motif superfamily protein OS=Theobroma cacao GN=TCM_015756 PE=3 SV... [more]
A5BA00_VITVI1.2e-7684.85Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038357 PE=3 SV=1[more]
D7TTY4_VITVI2.1e-7683.64Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g01120 PE=3 SV=... [more]
M5WVV1_PRUPE6.1e-7684.85Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012546mg PE=3 SV=1[more]
BLAST of Cucsa.313380 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G32470.13.8e-7783.73 Single hybrid motif superfamily protein[more]
AT2G35370.11.2e-7584.94 glycine decarboxylase complex H[more]
AT2G35120.15.5e-5262.65 Single hybrid motif superfamily protein[more]
BLAST of Cucsa.313380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461527|ref|XP_004148493.1|4.5e-88100.00PREDICTED: glycine cleavage system H protein 3, mitochondrial [Cucumis sativus][more]
gi|659131962|ref|XP_008465945.1|1.0e-8799.39PREDICTED: glycine cleavage system H protein, mitochondrial [Cucumis melo][more]
gi|694396308|ref|XP_009373439.1|3.8e-7987.27PREDICTED: glycine cleavage system H protein 3, mitochondrial-like [Pyrus x bret... [more]
gi|694408602|ref|XP_009378975.1|1.1e-7887.27PREDICTED: glycine cleavage system H protein 3, mitochondrial [Pyrus x bretschne... [more]
gi|658011635|ref|XP_008341065.1|2.5e-7886.67PREDICTED: glycine cleavage system H protein 3, mitochondrial-like [Malus domest... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000089Biotin_lipoyl
IPR002930GCV_H
IPR0030162-oxoA_DH_lipoyl-BS
IPR011053Single_hybrid_motif
IPR017453GCV_H_sub
Vocabulary: Cellular Component
TermDefinition
GO:0005960glycine cleavage complex
Vocabulary: Biological Process
TermDefinition
GO:0019464glycine decarboxylation via glycine cleavage system
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019464 glycine decarboxylation via glycine cleavage system
cellular_component GO:0005960 glycine cleavage complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.313380.1Cucsa.313380.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000089Biotin/lipoyl attachmentPROFILEPS50968BIOTINYL_LIPOYLcoord: 56..138
score: 28
IPR002930Glycine cleavage system H-proteinHAMAPMF_00272GcvHcoord: 38..159
score: 28
IPR002930Glycine cleavage system H-proteinPANTHERPTHR11715GLYCINE CLEAVAGE SYSTEM H PROTEINcoord: 1..165
score: 6.8E
IPR002930Glycine cleavage system H-proteinPFAMPF01597GCV_Hcoord: 41..160
score: 8.0
IPR0030162-oxo acid dehydrogenase, lipoyl-binding sitePROSITEPS00189LIPOYLcoord: 81..110
scor
IPR011053Single hybrid motifunknownSSF51230Single hybrid motifcoord: 37..160
score: 1.18
IPR017453Glycine cleavage system H-protein, subgroupTIGRFAMsTIGR00527TIGR00527coord: 39..162
score: 1.7
NoneNo IPR availableGENE3DG3DSA:2.40.50.100coord: 40..161
score: 6.3
NoneNo IPR availablePANTHERPTHR11715:SF1GLYCINE CLEAVAGE SYSTEM H PROTEIN 3, MITOCHONDRIALcoord: 1..165
score: 6.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.313380Csa3G903520Cucumber (Chinese Long) v2cgycuB450
Cucsa.313380MELO3C003386Melon (DHL92) v3.5.1cgymeB517
Cucsa.313380CSPI03G46950Wild cucumber (PI 183967)cgycpiB473
Cucsa.313380CmaCh19G004540Cucurbita maxima (Rimu)cgycmaB0869
Cucsa.313380CmaCh02G016000Cucurbita maxima (Rimu)cgycmaB0870
Cucsa.313380CmoCh02G016410Cucurbita moschata (Rifu)cgycmoB0870
Cucsa.313380CmoCh19G004700Cucurbita moschata (Rifu)cgycmoB0868
Cucsa.313380Cp4.1LG15g03480Cucurbita pepo (Zucchini)cgycpeB0819
Cucsa.313380Cp4.1LG05g02010Cucurbita pepo (Zucchini)cgycpeB0826
Cucsa.313380MELO3C003386.2Melon (DHL92) v3.6.1cgymedB517
Cucsa.313380CsaV3_3G049390Cucumber (Chinese Long) v3cgycucB487
Cucsa.313380Carg27402Silver-seed gourdcarcgyB0110
Cucsa.313380Carg08823Silver-seed gourdcarcgyB0890
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.313380Melon (DHL92) v3.6.1cgymedB518
Cucsa.313380Melon (DHL92) v3.6.1cgymedB519
Cucsa.313380Silver-seed gourdcarcgyB0790
Cucsa.313380Cucumber (Chinese Long) v3cgycucB482
Cucsa.313380Cucumber (Chinese Long) v3cgycucB488
Cucsa.313380Cucumber (Chinese Long) v3cgycucB489
Cucsa.313380Watermelon (97103) v2cgywmbB538
Cucsa.313380Watermelon (97103) v2cgywmbB542
Cucsa.313380Watermelon (97103) v2cgywmbB549
Cucsa.313380Wax gourdcgywgoB622
Cucsa.313380Wax gourdcgywgoB623
Cucsa.313380Wax gourdcgywgoB626
Cucsa.313380Cucumber (Gy14) v1cgycgyB127
Cucsa.313380Cucumber (Gy14) v1cgycgyB146
Cucsa.313380Cucurbita maxima (Rimu)cgycmaB0861
Cucsa.313380Cucurbita maxima (Rimu)cgycmaB0878
Cucsa.313380Cucurbita moschata (Rifu)cgycmoB0859
Cucsa.313380Cucurbita moschata (Rifu)cgycmoB0875
Cucsa.313380Wild cucumber (PI 183967)cgycpiB474
Cucsa.313380Cucumber (Chinese Long) v2cgycuB451
Cucsa.313380Melon (DHL92) v3.5.1cgymeB518
Cucsa.313380Watermelon (Charleston Gray)cgywcgB534
Cucsa.313380Watermelon (Charleston Gray)cgywcgB535
Cucsa.313380Watermelon (Charleston Gray)cgywcgB540
Cucsa.313380Watermelon (97103) v1cgywmB561
Cucsa.313380Watermelon (97103) v1cgywmB563
Cucsa.313380Watermelon (97103) v1cgywmB569
Cucsa.313380Cucurbita pepo (Zucchini)cgycpeB0815
Cucsa.313380Bottle gourd (USVL1VR-Ls)cgylsiB504
Cucsa.313380Bottle gourd (USVL1VR-Ls)cgylsiB506
Cucsa.313380Bottle gourd (USVL1VR-Ls)cgylsiB508
Cucsa.313380Bottle gourd (USVL1VR-Ls)cgylsiB510