Cucsa.308540 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.308540
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionThioredoxin
Locationscaffold02978 : 611480 .. 613565 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCTTTGAATTTTCTTTTGTTTCCCAATTCTTCTCCCCTTCCGAAATGGTCAAAGCTCTGCCCCTTCACCACGGAATTGTGAAATCTTTTCCCAAATTCGGCAGTTCTTTTGATCTTCCTCCGTCTCCTCAACTTCTGTCCGCGAGGCTCGCCGGCTCTGGTTTCAATAGGCTTCCTTTGTCTCGGAAATTTCCGCCGCTTTTTCAGAAAGTTTCTGCGACTGGTGAGAAGACTTCGCTTTTTGGAGCTTGGACCCAAGATAGTGCCTTGCAATTTCGAGATGAATCGCCTGTTTCGATTGAGCTTAAGTCAATTTCGAGTGAACTTGAGTTCGATAAGGCTATTGCAGATGCGGAGGAACGCAACGAGCTCGTGATTCTTGTTTGGTATGTTTAAGTTTCTTGTGGGATTTTTCTGGGAAATGTTGAGTTAATTACGGAACTTTCTAACAAAGCGTTTTTCGGCTTAAGTTTTAGAGAGACGATGTGAAAGTATTTGAGTTTGACTGAATCTTGTTTGATTAGAAGTTTATTTGTTTATTAGGAAAGATTGTTCTCAACTGCTAGATTGATTAACCTTCGTTGTACATTGATTTTGATCATTTGGAAGTGAATGGCGTGATTGATATTCTTCTTCAATTTTCCTTACAAGCCTTTCAAATGCATTTCTCATGATTTTATCATCTTTAGTTGAAAAGTGAATTTATGTGGATCTGTAGGATGGCTAACTGGTGCAGAAATTATATCTATTTAAAGCCTCAACTGGAAAGATTGGCTGCTGATTATTACCCCAGGTTAGCTCCTAACCCATTTCTTCTAATCAACCAAATGGCTAAAATTGTACTATATTTTCATTCTCCATGTGCTGGATACTTCTTAAAAGATCAGTTTTTCAGTCCTTATTGAAGTTTTGTATGTGCTTGATGAATTGTAGATTGCAATTCTACTGCATTGATGTCAATGTGGTGCCACACAAGCTAGTTGTTCGAGCCGGACTAGCTGTAAGTTCCTTTCAAAGCCTTTTGATGTTTGTTCCATTTTTTTTGTGTTGCCTTAAACCTTTATATTGATCTTCTTTAGGTAGGACTTGAGGTTATGATAACTTCTACTTCTCTGAGAGAGTGATTTTCTTTGGATACTGTACTAGAGCTTCTGTCTACAATGGAAATTAGGGCTTGTGTTTCATTGCCTTCAGGAACATTCCCAACTTGCAGTTTGAACATAGGAGACAGTAGACATGTTGAGTTTATGTTACTTTGATGGATTAGTTTATTGAATAAATTACATTATCTGTTGAGTGTTTAATTCGAATATGTCCAAACAAAAAATCTTTCCTTGGTTGAGTGATACAAATTCTGATAGTTTTGATTTTGTACATCTTCTCATGTATCTCAATCGTTCGCCTTTGAATCATCCAGAAGATGCCAGCTATACAGGTGAGTTTCCTCACAATCAGATATCTTATAGCTGGAAACATTTCTCTCTACTAACGTCAAGATCTTAATTGTGTTTATTGCAGCTATGGAAGGATGGTAAGAAACAAGATGAGGTGGTTGGTCTCTACAAAGCATATCTAGTTGTCAACGATGTTCGGAAAATGATTGAACGTGAGCTAACAGATGAGTGACATACGATTCATTTTTACCCACATCCTCTTATCCACTTAGTGGTATTGAAATTGATTGATAACATCTCACAGAAATTCCTTTCTGCTTATATTCATCAACATAAAGAACAAAGCCTGGCTGGCCTTCTTGCCAAGTCTTTGTCATTGCAGAGATCATTTCTTTGTTGTCATGGGGTGGATGATCTAACATGTATGTCCAATTCTTGACAATATACGCATTGTGAGGAAGTCTTATTTGTAAGGTTTACCTTCCTTTTTATACCATTCCTTTCCCTTATATCTGATATGCAGAGGGCTCTGTTTTGTGTTGGTAGATTAATTTAATTGTTCTGATCTATTATGAATTACACGTCTCTTTCCGAGTCTTCTGGATCTCTCTGCTTTTAACAATTAATGGATGTTGCCTTGAAAAAGCACTTGAGGAGAGGATTAGGTGGACCTTGAACATTGAAAAGAGCTA

mRNA sequence

CCCTTTGAATTTTCTTTTGTTTCCCAATTCTTCTCCCCTTCCGAAATGGTCAAAGCTCTGCCCCTTCACCACGGAATTGTGAAATCTTTTCCCAAATTCGGCAGTTCTTTTGATCTTCCTCCGTCTCCTCAACTTCTGTCCGCGAGGCTCGCCGGCTCTGGTTTCAATAGGCTTCCTTTGTCTCGGAAATTTCCGCCGCTTTTTCAGAAAGTTTCTGCGACTGGTGAGAAGACTTCGCTTTTTGGAGCTTGGACCCAAGATAGTGCCTTGCAATTTCGAGATGAATCGCCTGTTTCGATTGAGCTTAAGTCAATTTCGAGTGAACTTGAGTTCGATAAGGCTATTGCAGATGCGGAGGAACGCAACGAGCTCGTGATTCTTGTTTGGATGGCTAACTGGTGCAGAAATTATATCTATTTAAAGCCTCAACTGGAAAGATTGGCTGCTGATTATTACCCCAGATTGCAATTCTACTGCATTGATGTCAATGTGGTGCCACACAAGCTAGTTGTTCGAGCCGGACTAGCTAAGATGCCAGCTATACAGCTATGGAAGGATGGTAAGAAACAAGATGAGGTGGTTGGTCTCTACAAAGCATATCTAGTTGTCAACGATGTTCGGAAAATGATTGAACGTGAGCTAACAGATGAGTGACATACGATTCATTTTTACCCACATCCTCTTATCCACTTAGTGGTATTGAAATTGATTGATAACATCTCACAGAAATTCCTTTCTGCTTATATTCATCAACATAAAGAACAAAGCCTGGCTGGCCTTCTTGCCAAGTCTTTGTCATTGCAGAGATCATTTCTTTGTTGTCATGGGGTGGATGATCTAACATGTATGTCCAATTCTTGACAATATACGCATTGTGAGGAAGTCTTATTTGTAAGGTTTACCTTCCTTTTTATACCATTCCTTTCCCTTATATCTGATATGCAGAGGGCTCTGTTTTGTGTTGGTAGATTAATTTAATTGTTCTGATCTATTATGAATTACACGTCTCTTTCCGAGTCTTCTGGATCTCTCTGCTTTTAACAATTAATGGATGTTGCCTTGAAAAAGCACTTGAGGAGAGGATTAGGTGGACCTTGAACATTGAAAAGAGCTA

Coding sequence (CDS)

ATGGTCAAAGCTCTGCCCCTTCACCACGGAATTGTGAAATCTTTTCCCAAATTCGGCAGTTCTTTTGATCTTCCTCCGTCTCCTCAACTTCTGTCCGCGAGGCTCGCCGGCTCTGGTTTCAATAGGCTTCCTTTGTCTCGGAAATTTCCGCCGCTTTTTCAGAAAGTTTCTGCGACTGGTGAGAAGACTTCGCTTTTTGGAGCTTGGACCCAAGATAGTGCCTTGCAATTTCGAGATGAATCGCCTGTTTCGATTGAGCTTAAGTCAATTTCGAGTGAACTTGAGTTCGATAAGGCTATTGCAGATGCGGAGGAACGCAACGAGCTCGTGATTCTTGTTTGGATGGCTAACTGGTGCAGAAATTATATCTATTTAAAGCCTCAACTGGAAAGATTGGCTGCTGATTATTACCCCAGATTGCAATTCTACTGCATTGATGTCAATGTGGTGCCACACAAGCTAGTTGTTCGAGCCGGACTAGCTAAGATGCCAGCTATACAGCTATGGAAGGATGGTAAGAAACAAGATGAGGTGGTTGGTCTCTACAAAGCATATCTAGTTGTCAACGATGTTCGGAAAATGATTGAACGTGAGCTAACAGATGAGTGA

Protein sequence

MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVGLYKAYLVVNDVRKMIERELTDE*
Homology
[Close]
BLAST of Cucsa.308540 vs. Swiss-Prot
Match: TRL32_ARATH (Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana GN=WCRKC2 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-40
Identity = 86/176 (48.86%), Postives = 117/176 (66.48%), Query Frame = 1 

Query: 27  SPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATGEKTSLFGAWTQDSALQFRDESPVSIE 86
           SP +   R   S F+R P + K+     K+    E+        QD  LQ  D+SPVS+E
Sbjct: 19  SPLVPPYRQTSSSFSR-PRNFKYHSFTDKICLAAERIRAVDIQKQDGGLQELDDSPVSVE 78

Query: 87  LKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCID 146
           L  I  E  FD+ + DA++  E V++VWMA WCR  IYLKP+LE+LAA++YPRL+FY +D
Sbjct: 79  LGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVD 138

Query: 147 VNVVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQDEVVGLYKAYLVVNDVRKMIERE 203
           VN VP++LV RAG+     KMP IQLW+DG+KQ EV+G +KA+ VVN+VR+MIE +
Sbjct: 139 VNAVPYRLVSRAGVT----KMPTIQLWRDGQKQAEVIGGHKAHFVVNEVREMIEND 189

[Close]
BLAST of Cucsa.308540 vs. Swiss-Prot
Match: TRL31_ARATH (Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana GN=WCRKC1 PE=2 SV=3)

HSP 1 Score: 115.2 bits (287), Expect = 8.8e-25
Identity = 52/120 (43.33%), Postives = 85/120 (70.83%), Query Frame = 1 

Query: 82  PVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQ 141
           P ++E++ I++  E D  ++ A + ++ +I+ WMA+WCR  IYLKP+LE+LAA+Y  R +
Sbjct: 93  PTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAK 152

Query: 142 FYCIDVNVVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQDEVVGLYKAYLVVNDVRKMIER 201
           FY +DVN VP  LV R  ++    KMP IQLWK+ + ++EV+G +K +LV+ +VR++I +
Sbjct: 153 FYYVDVNKVPQTLVKRGNIS----KMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELINK 208

[Close]
BLAST of Cucsa.308540 vs. Swiss-Prot
Match: TRL31_ORYSJ (Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0774100 PE=3 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-22
Identity = 52/117 (44.44%), Postives = 82/117 (70.09%), Query Frame = 1 

Query: 85  IELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYC 144
           +E++ I S  + D A+  + E  + +I+ WMA+WCR  IYLKP+LE++A + +P ++FY 
Sbjct: 80  VEMEEIDSMEKLDDALRWSVENKQPIIIDWMASWCRKCIYLKPRLEKIAGE-FPGVRFYF 139

Query: 145 IDVNVVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQDEVVGLYKAYLVVNDVRKMIER 202
           +DVN VP  +V R  +     KMP IQLWKDG+   EV+G +KA+LV+++VR+MI++
Sbjct: 140 VDVNKVPQTVVKRGNIT----KMPTIQLWKDGEWAAEVIGGHKAWLVMDEVREMIQK 191

[Close]
BLAST of Cucsa.308540 vs. Swiss-Prot
Match: TRXH8_ARATH (Thioredoxin H8 OS=Arabidopsis thaliana GN=TRX8 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.0e-06
Identity = 35/118 (29.66%), Postives = 64/118 (54.24%), Query Frame = 1 

Query: 69  WT-QDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKP 128
           WT +     F+  SP  +E+K+++   ++   +   ++ N+L+++ + A WC     L+P
Sbjct: 23  WTPRPEIYPFKVNSPCIVEIKNMN---QWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEP 82

Query: 129 QLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQDEVVGL 186
           +LE LAA  Y  ++F  IDV+V     ++   +   L  +PAI   K G++ D VVG+
Sbjct: 83  KLEELAAK-YTDVEFVKIDVDV-----LMSVWMEFNLSTLPAIVFMKRGREVDMVVGV 131

[Close]
BLAST of Cucsa.308540 vs. TrEMBL
Match: A0A0A0KUX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G622670 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 5.2e-109
Identity = 202/206 (98.06%), Postives = 202/206 (98.06%), Query Frame = 1 

Query: 1   MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG 60
           MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG
Sbjct: 1   MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG 60

Query: 61  EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120
           EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR
Sbjct: 61  EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQD 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLA    KMPAIQLWKDGKKQD
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLA----KMPAIQLWKDGKKQD 180

Query: 181 EVVGLYKAYLVVNDVRKMIERELTDE 207
           EVVGLYKAYLVVNDVRKMIERELTDE
Sbjct: 181 EVVGLYKAYLVVNDVRKMIERELTDE 202

[Close]
BLAST of Cucsa.308540 vs. TrEMBL
Match: D7TM63_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g04650 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-44
Identity = 97/182 (53.30%), Postives = 123/182 (67.58%), Query Frame = 1 

Query: 24  LPPSPQLLSARLAGSGFNRLPLS---RKFPPLFQKVSATGEKTSLFGAWTQDSALQFRDE 83
           LP +P+  S  L       L +S   RK     QK+  +G K     AW Q+  LQ  D+
Sbjct: 15  LPTTPRGSSRILQQFSIPGLSISDFPRKSLNFPQKIGVSGGKVWALAAWNQEGPLQDLDD 74

Query: 84  SPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRL 143
           SPVS+ELK ISS+ +FD+ + +A++  E V +VWMA WCR  IYLKP+LE+LAA+YYPRL
Sbjct: 75  SPVSVELKPISSDTQFDRILGEAQQLEESVAIVWMATWCRKCIYLKPKLEKLAAEYYPRL 134

Query: 144 QFYCIDVNVVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQDEVVGLYKAYLVVNDVRKMIE 203
           +FYC+DVN VPHKLV RA +     KMP IQLWKD KKQ EV+G +KAY VVN+VR+MIE
Sbjct: 135 RFYCVDVNTVPHKLVARAAVT----KMPTIQLWKDSKKQAEVIGGHKAYFVVNEVREMIE 192

[Close]
BLAST of Cucsa.308540 vs. TrEMBL
Match: A0A061FN59_THECC (WCRKC thioredoxin 2 OS=Theobroma cacao GN=TCM_043218 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.0e-44
Identity = 89/167 (53.29%), Postives = 123/167 (73.65%), Query Frame = 1 

Query: 38  SGFNRLPLSRKFPPLFQKVSATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFD 97
           S F+ L L RK     ++++  G K  +F AW +D  L+  D++P+++EL+ I SE +FD
Sbjct: 40  SSFDGLSLKRKTLSFSERINRFGGKFGIFNAWKKDGYLEELDDAPLAVELQQICSESQFD 99

Query: 98  KAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVR 157
           + IA+A++  E +I++WMA+WCR  IYLKP+LE+LAA+YYPRL+FY +DVN VPH LV R
Sbjct: 100 RVIAEAQQLEESLIILWMASWCRKCIYLKPKLEKLAAEYYPRLRFYRVDVNTVPHNLVAR 159

Query: 158 AGLAVGLEKMPAIQLWKDGKKQDEVVGLYKAYLVVNDVRKMIERELT 205
           AG+     KMP IQLW+D KKQ EV+G +KAYLVVN+VR+MIE E T
Sbjct: 160 AGVT----KMPTIQLWRDSKKQAEVIGGHKAYLVVNEVREMIENECT 202

[Close]
BLAST of Cucsa.308540 vs. TrEMBL
Match: A0A0D2UWR5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G311900 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.5e-44
Identity = 86/160 (53.75%), Postives = 120/160 (75.00%), Query Frame = 1 

Query: 45  LSRKFPPLFQKVSATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAE 104
           L RK     +K++  G    +F AW ++  L+  D++P+++EL+ I SE +FD+ IA+A+
Sbjct: 47  LKRKILGFDEKINGFGGNFGIFSAWREEGQLEELDDAPLTVELQQICSESQFDRVIAEAQ 106

Query: 105 ERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLAVGL 164
           +  E +I++WMA+WCR  IYLKP+LE+LAAD++PRL+FYC+DVN VPH LV RAG+    
Sbjct: 107 QLEESLIILWMASWCRKCIYLKPKLEKLAADFHPRLRFYCVDVNTVPHNLVARAGVT--- 166

Query: 165 EKMPAIQLWKDGKKQDEVVGLYKAYLVVNDVRKMIERELT 205
            KMP IQLW+DGKKQ EV+G +KAYLVVN+VR+MIE E T
Sbjct: 167 -KMPTIQLWRDGKKQAEVIGGHKAYLVVNEVRQMIENECT 202

[Close]
BLAST of Cucsa.308540 vs. TrEMBL
Match: M5X258_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009790mg PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.2e-42
Identity = 101/192 (52.60%), Postives = 128/192 (66.67%), Query Frame = 1 

Query: 20  SSFDLPPSPQL----LSARLAG-----SGFNRLPLSRKFPPLFQKVSATGEKTSLFGAWT 79
           +S D P SP+L    LS RL G     S  N L  SRKF  + + + A         A +
Sbjct: 94  ASRDPPTSPELKISILSFRLRGPTRYPSSSNPLVFSRKFDEIRRPIRAVN-------ALS 153

Query: 80  QDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLE 139
           Q+ +LQ  D++PVS+ L  IS E +FD+ +A A++  E V++VWMA+WCR  IYLKP+LE
Sbjct: 154 QEGSLQELDDTPVSVALVPISGETQFDRVMAQAQQLEESVVVVWMASWCRKCIYLKPKLE 213

Query: 140 RLAADYYPRLQFYCIDVNVVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQDEVVGLYKAYL 199
           +LAA+YYPRL FY +DVN VPHKLV RA +     KMP IQLWKDGKKQ EV+G +KAYL
Sbjct: 214 KLAAEYYPRLWFYSVDVNSVPHKLVARAEVT----KMPTIQLWKDGKKQAEVIGGHKAYL 273

Query: 200 VVNDVRKMIERE 203
           VVN+VR MIE E
Sbjct: 274 VVNEVRDMIENE 274

[Close]
BLAST of Cucsa.308540 vs. TAIR10
Match: AT5G04260.1 (AT5G04260.1 WCRKC thioredoxin 2)

HSP 1 Score: 167.5 bits (423), Expect = 8.4e-42
Identity = 86/176 (48.86%), Postives = 117/176 (66.48%), Query Frame = 1 

Query: 27  SPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATGEKTSLFGAWTQDSALQFRDESPVSIE 86
           SP +   R   S F+R P + K+     K+    E+        QD  LQ  D+SPVS+E
Sbjct: 19  SPLVPPYRQTSSSFSR-PRNFKYHSFTDKICLAAERIRAVDIQKQDGGLQELDDSPVSVE 78

Query: 87  LKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCID 146
           L  I  E  FD+ + DA++  E V++VWMA WCR  IYLKP+LE+LAA++YPRL+FY +D
Sbjct: 79  LGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVD 138

Query: 147 VNVVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQDEVVGLYKAYLVVNDVRKMIERE 203
           VN VP++LV RAG+     KMP IQLW+DG+KQ EV+G +KA+ VVN+VR+MIE +
Sbjct: 139 VNAVPYRLVSRAGVT----KMPTIQLWRDGQKQAEVIGGHKAHFVVNEVREMIEND 189

[Close]
BLAST of Cucsa.308540 vs. TAIR10
Match: AT5G06690.2 (AT5G06690.2 WCRKC thioredoxin 1)

HSP 1 Score: 82.4 bits (202), Expect = 3.6e-16
Identity = 36/81 (44.44%), Postives = 57/81 (70.37%), Query Frame = 1 

Query: 82  PVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQ 141
           P ++E++ I++  E D  ++ A + ++ +I+ WMA+WCR  IYLKP+LE+LAA+Y  R +
Sbjct: 93  PTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAK 152

Query: 142 FYCIDVNVVPHKLVVRAGLAV 163
           FY +DVN VP  LV R  ++V
Sbjct: 153 FYYVDVNKVPQTLVKRGNISV 173

[Close]
BLAST of Cucsa.308540 vs. TAIR10
Match: AT1G69880.1 (AT1G69880.1 thioredoxin H-type 8)

HSP 1 Score: 52.4 bits (124), Expect = 3.9e-07
Identity = 35/118 (29.66%), Postives = 64/118 (54.24%), Query Frame = 1 

Query: 69  WT-QDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKP 128
           WT +     F+  SP  +E+K+++   ++   +   ++ N+L+++ + A WC     L+P
Sbjct: 23  WTPRPEIYPFKVNSPCIVEIKNMN---QWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEP 82

Query: 129 QLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQDEVVGL 186
           +LE LAA  Y  ++F  IDV+V     ++   +   L  +PAI   K G++ D VVG+
Sbjct: 83  KLEELAAK-YTDVEFVKIDVDV-----LMSVWMEFNLSTLPAIVFMKRGREVDMVVGV 131

[Close]
BLAST of Cucsa.308540 vs. NCBI nr
Match: gi|778706563|ref|XP_011655873.1| (PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 408.3 bits (1048), Expect = 8.0e-111
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 1 

Query: 1   MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG 60
           MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG
Sbjct: 1   MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG 60

Query: 61  EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120
           EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR
Sbjct: 61  EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQD 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLAVGLE MPAIQLWKDGKKQD
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLAVGLE-MPAIQLWKDGKKQD 180

Query: 181 EVVGLYKAYLVVNDVRKMIERELTDE 207
           EVVGLYKAYLVVNDVRKMIERELTDE
Sbjct: 181 EVVGLYKAYLVVNDVRKMIERELTDE 205

[Close]
BLAST of Cucsa.308540 vs. NCBI nr
Match: gi|778706568|ref|XP_004142496.2| (PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 401.7 bits (1031), Expect = 7.5e-109
Identity = 202/206 (98.06%), Postives = 202/206 (98.06%), Query Frame = 1 

Query: 1   MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG 60
           MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG
Sbjct: 1   MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG 60

Query: 61  EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120
           EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR
Sbjct: 61  EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQD 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLA    KMPAIQLWKDGKKQD
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLA----KMPAIQLWKDGKKQD 180

Query: 181 EVVGLYKAYLVVNDVRKMIERELTDE 207
           EVVGLYKAYLVVNDVRKMIERELTDE
Sbjct: 181 EVVGLYKAYLVVNDVRKMIERELTDE 202

[Close]
BLAST of Cucsa.308540 vs. NCBI nr
Match: gi|659092008|ref|XP_008446851.1| (PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X7 [Cucumis melo])

HSP 1 Score: 401.7 bits (1031), Expect = 7.5e-109
Identity = 200/206 (97.09%), Postives = 202/206 (98.06%), Query Frame = 1 

Query: 1   MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG 60
           MVKALPLH GIVKSFPKF SSFDLPPSPQLLSARL GSGFNRLPLSRKFPP+FQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120
           EKTSL GAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQD 180
           NYIYLKPQLERLAADYYPRLQFYCIDVN+VPHKLVVRAGLAVGLEKMPAIQLWKDGKKQD
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQD 180

Query: 181 EVVGLYKAYLVVNDVRKMIERELTDE 207
           EVVGLYKAYLVVNDVRKMIERELTDE
Sbjct: 181 EVVGLYKAYLVVNDVRKMIERELTDE 206

[Close]
BLAST of Cucsa.308540 vs. NCBI nr
Match: gi|778706571|ref|XP_011655874.1| (PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X3 [Cucumis sativus])

HSP 1 Score: 399.4 bits (1025), Expect = 3.7e-108
Identity = 201/206 (97.57%), Postives = 201/206 (97.57%), Query Frame = 1 

Query: 1   MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG 60
           MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG
Sbjct: 1   MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG 60

Query: 61  EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120
           EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR
Sbjct: 61  EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQD 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLA     MPAIQLWKDGKKQD
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLA-----MPAIQLWKDGKKQD 180

Query: 181 EVVGLYKAYLVVNDVRKMIERELTDE 207
           EVVGLYKAYLVVNDVRKMIERELTDE
Sbjct: 181 EVVGLYKAYLVVNDVRKMIERELTDE 201

[Close]
BLAST of Cucsa.308540 vs. NCBI nr
Match: gi|659092000|ref|XP_008446847.1| (PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X3 [Cucumis melo])

HSP 1 Score: 394.8 bits (1013), Expect = 9.2e-107
Identity = 200/213 (93.90%), Postives = 202/213 (94.84%), Query Frame = 1 

Query: 1   MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG 60
           MVKALPLH GIVKSFPKF SSFDLPPSPQLLSARL GSGFNRLPLSRKFPP+FQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120
           EKTSL GAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYP-------RLQFYCIDVNVVPHKLVVRAGLAVGLEKMPAIQLW 180
           NYIYLKPQLERLAADYYP       RLQFYCIDVN+VPHKLVVRAGLAVGLEKMPAIQLW
Sbjct: 121 NYIYLKPQLERLAADYYPSMCLMNCRLQFYCIDVNMVPHKLVVRAGLAVGLEKMPAIQLW 180

Query: 181 KDGKKQDEVVGLYKAYLVVNDVRKMIERELTDE 207
           KDGKKQDEVVGLYKAYLVVNDVRKMIERELTDE
Sbjct: 181 KDGKKQDEVVGLYKAYLVVNDVRKMIERELTDE 213

The following BLAST results are available for this feature:
BLAST of Cucsa.308540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRL32_ARATH1.5e-4048.86Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana GN=WCRKC2 PE=2 SV=1[more]
TRL31_ARATH8.8e-2543.33Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana GN=WCRKC1 PE=2 SV=3[more]
TRL31_ORYSJ1.8e-2244.44Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0774... [more]
TRXH8_ARATH7.0e-0629.66Thioredoxin H8 OS=Arabidopsis thaliana GN=TRX8 PE=2 SV=1[more]
BLAST of Cucsa.308540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUX7_CUCSA5.2e-10998.06Uncharacterized protein OS=Cucumis sativus GN=Csa_5G622670 PE=4 SV=1[more]
D7TM63_VITVI1.2e-4453.30Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g04650 PE=4 SV=... [more]
A0A061FN59_THECC2.0e-4453.29WCRKC thioredoxin 2 OS=Theobroma cacao GN=TCM_043218 PE=4 SV=1[more]
A0A0D2UWR5_GOSRA3.5e-4453.75Uncharacterized protein OS=Gossypium raimondii GN=B456_009G311900 PE=4 SV=1[more]
M5X258_PRUPE3.2e-4252.60Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009790mg PE=4 SV=1[more]
BLAST of Cucsa.308540 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G04260.18.4e-4248.86 WCRKC thioredoxin 2[more]
AT5G06690.23.6e-1644.44 WCRKC thioredoxin 1[more]
AT1G69880.13.9e-0729.66 thioredoxin H-type 8[more]
BLAST of Cucsa.308540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778706563|ref|XP_011655873.1|8.0e-11199.51PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X1 [Cucumis sativus][more]
gi|778706568|ref|XP_004142496.2|7.5e-10998.06PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X2 [Cucumis sativus][more]
gi|659092008|ref|XP_008446851.1|7.5e-10997.09PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X7 [Cucumis melo][more]
gi|778706571|ref|XP_011655874.1|3.7e-10897.57PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X3 [Cucumis sativus][more]
gi|659092000|ref|XP_008446847.1|9.2e-10793.90PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005746Thioredoxin
IPR012336Thioredoxin-like_fold
IPR013766Thioredoxin_domain
IPR005746Thioredoxin
IPR012336Thioredoxin-like_fold
IPR013766Thioredoxin_domain
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO:0015035protein disulfide oxidoreductase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005623 cell
cellular_component GO:0005575 cellular_component
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.308540.2Cucsa.308540.2mRNA
Cucsa.308540.1Cucsa.308540.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 24..198
score: 3.1
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 87..195
score: 5.1
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 87..196
score: 1.98
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 93..185
score: 3.
IPR013766Thioredoxin domainPROFILEPS51352THIOREDOXIN_2coord: 75..200
score: 8
NoneNo IPR availablePANTHERPTHR10438:SF297THIOREDOXIN-LIKE 3-2, CHLOROPLASTICcoord: 24..198
score: 3.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.308540Cla020547Watermelon (97103) v1cgywmB559
Cucsa.308540Csa5G622670Cucumber (Chinese Long) v2cgycuB441
Cucsa.308540MELO3C012410Melon (DHL92) v3.5.1cgymeB508
Cucsa.308540ClCG05G021170Watermelon (Charleston Gray)cgywcgB530
Cucsa.308540CSPI05G26960Wild cucumber (PI 183967)cgycpiB464
Cucsa.308540CmaCh18G009040Cucurbita maxima (Rimu)cgycmaB0849
Cucsa.308540CmoCh18G009080Cucurbita moschata (Rifu)cgycmoB0847
Cucsa.308540Lsi04G000830Bottle gourd (USVL1VR-Ls)cgylsiB497
Cucsa.308540Cp4.1LG09g04000Cucurbita pepo (Zucchini)cgycpeB0804
Cucsa.308540MELO3C012410.2Melon (DHL92) v3.6.1cgymedB508
Cucsa.308540CsaV3_5G036090Cucumber (Chinese Long) v3cgycucB479
Cucsa.308540Cla97C05G102830Watermelon (97103) v2cgywmbB533
Cucsa.308540Bhi07G000720Wax gourdcgywgoB620
Cucsa.308540Carg20706Silver-seed gourdcarcgyB0556
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.308540Cucumber (Gy14) v1cgycgyB088
Cucsa.308540Cucumber (Gy14) v1cgycgyB143
Cucsa.308540Cucumber (Gy14) v1cgycgyB145
Cucsa.308540Cucurbita maxima (Rimu)cgycmaB0848
Cucsa.308540Cucurbita maxima (Rimu)cgycmaB0850
Cucsa.308540Cucurbita maxima (Rimu)cgycmaB0851
Cucsa.308540Cucurbita moschata (Rifu)cgycmoB0846
Cucsa.308540Cucurbita moschata (Rifu)cgycmoB0848
Cucsa.308540Cucurbita moschata (Rifu)cgycmoB0849
Cucsa.308540Wild cucumber (PI 183967)cgycpiB465
Cucsa.308540Cucumber (Chinese Long) v2cgycuB442
Cucsa.308540Melon (DHL92) v3.5.1cgymeB509
Cucsa.308540Melon (DHL92) v3.5.1cgymeB510
Cucsa.308540Watermelon (Charleston Gray)cgywcgB529
Cucsa.308540Watermelon (Charleston Gray)cgywcgB532
Cucsa.308540Watermelon (97103) v1cgywmB557
Cucsa.308540Watermelon (97103) v1cgywmB558
Cucsa.308540Cucurbita pepo (Zucchini)cgycpeB0805
Cucsa.308540Cucurbita pepo (Zucchini)cgycpeB0806
Cucsa.308540Cucurbita pepo (Zucchini)cgycpeB0807
Cucsa.308540Bottle gourd (USVL1VR-Ls)cgylsiB498
Cucsa.308540Melon (DHL92) v3.6.1cgymedB509
Cucsa.308540Silver-seed gourdcarcgyB0318
Cucsa.308540Silver-seed gourdcarcgyB0769
Cucsa.308540Silver-seed gourdcarcgyB0969
Cucsa.308540Watermelon (97103) v2cgywmbB535
Cucsa.308540Wax gourdcgywgoB618