Cucsa.301880 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.301880
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionAutophagy-related protein
Locationscaffold02951 : 118667 .. 121514 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTTTTAAAAATAAGAAAAATTATTGAACACCGAACCAACGCCACCGTGAAGGCTTCACTCTCTTTTTATCTGTAATTCAATCAAAGCTCGATTCTCGCAAAATTTCTCGCCCAAAACCCATTTCCTTTCTTGTTTGAGGACAATTGGGTCCGTTTCTTTTACTCTCAGCTGGATTCCCACCTCCATTAATTTCTCTCAACTCTCTCTTAGGTTTGTTCTTTTTCTCTCCATGATCCTTGATTATTTTTGTTAGTTCTTCTCTCATCTACTTCTCAATCTATCTGCTGAATTTCTTTTTCCTTATTTCTTCCGTTGTTTCTTGTCGTCTGATGATTCAATGTTTGAATTTGATTCCCTCAGTTTAATTTCTTTTTCTTGTTGTTTGTTGATTGGGAAAGTTGTAAGAGTTTGTTGGGGCTGTCGAGTTTACCGGACTAGTGAAATTCTAGGTGGTTTTAATTGATAAGTGTGCTATTCTGTTGGTCACGATTATTTTTTtCCGTTAATTATGGCGATTTTTAGATTTTTATTTGTTGGGTTTTGATTGTGTTGTTCTTATTTTCCGcTTTCCCAGTTTCCCCAAcTTTCTAAAaTTCTGGAGTtGtCTTTTTTTTTTTTTTtttnTtttttttttGAATTTAAATTGAAGGAGTTTGACGCTCGTGGATTGTAGTTTCAAGACTGATGGCTAAGAGTTACTTCAAGCAAGAGCATGATCTTGGTAGTCTTCTTCTCTATGTTTCCAAAATGCTTTTCTTTTTCCCTTGGTATTATACTAAATCCATTTTGTAAGATAAGAACTGATGAGTTTTCCATGTTTGTTTTATTAGAGAAAAGAAAAGCAGAGGCTGCAAGGATTAGGGAGAAATATCCCGATAGAATTCCTGTAAGAAATGAATTTATTTTGTTACCGTGATTTGATTGGCTATTGGTTATTATCAACTTtAAATTCAGAATCTCAGAATTTGTTTTGCCAAAGCGTTGATGTTATTGTTCTTTTTAACTTCCTCTGATTGATGAATGAGTCGAATTTTTTCTGAATTTCCTTATCATCCATTGCCAGTATCCTTTTTCTTTCGTATTCATTTGGTAAGGAAGCAATCAGTTATTATTATTATTTTTTAGTTCAACGACATATGGTTGACAAGAAACTATCAGTTATTGATAATGTTGTCTTTGATTTCTTTCTGGACAACAGACGGTGATGATTATGTTGTTACTGATTTGATTTAGCAAGGGGGTTGTGTATAAGCAGTAGAGAGGAAGTGTGTTTTAAGAATAAAATGTCTCAAAATGAAGGCATCTGTTGTATTTTTGTTTGCGCACATGTTTCAGCATTTCATCAGTTACTGCTTGGTTATATAATCATGTTCTTATTGTTTCAAGGTTATTGTGGAGAAGGCAGAGAGAAGTGACATCCCTAGCATTGATAAGAAGAAGTAAGTACACCGACATTCATTTTGTAGTTATTCGTTGTAGTTATCTTTTCTTTTATGTAGATGTATATCAATTAAAGTCGGAGGAAACTTTGAAGAAATATTATTTAGGGAAGTATTCTGTGTTCAACTCTTTTTCATCTAAGGAAACATAGCTACTGGTAGCTGAGAATTGAATTTTCTTTCTTCTATGTTAGAATTTATGTTCAATGATAGACTGTTTTTCGTTATCTTTTCTCTTTTTGTCTTTTGATTGATGTTCGATGAGCTGAACACGCAAGCAGTCTTACTGGAAGCTCTTTTTCATCTCTTTGAAAGTGGCGTTTATTTAACTTTTAAAATTATGTTCCTGTTTTCTTCTCATAGTTCTGTTGTCTATTTGCTTTATATATACAATTCATTTCAAAACCACAAGGGGAAAATGACCAATTGACAATCCTTCACCTCTTTCTCTTTCTATACCTAAGATTTTGATGTAATGACTGCAGATACCTAGTTCCTGCAGACCTTACTGTGGGACAGTTCGTTTATGTCATTCGTAAAAGGATTAAATTGAGCCCGGAGAAAGCGATCTTTATCTTCGTGGACAATGTCCTCCCTCCTACAGGTACAGCCTTTTCTTCTATAACATATTGGAGGGTATGTTTAGGACCACTTGAAAATGAAAGGCCGTCCCATAAACAAGTTCATTTAACAGATTTCGGTAACGATCATATCAATAATGTTGATTATGATCTATCATAAACGCCACACAGTTTTGACATAATGGGTACACATGGCACCTCAAATAACAATTATATCAAAGATAGCAGAAAATTTAATGAAAGGTCATGTTCAAAATTTCAAAAACTATATCGGTTTTATATGCAAGGATCAAGATCTATAACTTGTTGTATCCAACTTGCCTAAACAAACCACTTATTTTTTTCCTtGTTAAGGAGCAATCATGTCTGCAATATATGAAGAGAAGAAGGATGAAGATGGATTTCTGTATGTTACTTACAGTGGAGAGAACACATTTGGGTGGTAGCTGGCTTGTGTGGTAGACCTGATTGTTCTTAGATTTTCACTTCATTGCTATTGTCGCGGCCGTCGTTGTAGTCATCTTCCACTGTTCTCTCTGCCTCTTCCTTTTGCTGCTCCTTGTTCTTCCAGTTCTTCAAGGATTCTGGCAAGTGATACATTCTGTACAGCTCTACATAATGAATAAAATTTGTGAAAACATTTCCACGCCAAAAAGTTATTAATTGCTTCCAATATTGCTTTTATAATTCCTTTTGCCCCAAATTTTTTATGGGGTTTTTTtCTTCTGTTTATTGTAAAGATAAAATCTCTTACAAAAAAATCGTTTTTACTCATTAAAAAGATATTCCATCTACTCTTATAATAACCTCCCTAATATTATTCTCA

mRNA sequence

TGGTTTTAAAAATAAGAAAAATTATTGAACACCGAACCAACGCCACCGTGAAGGCTTCACTCTCTTTTTATCTGTAATTCAATCAAAGCTCGATTCTCGCAAAATTTCTCGCCCAAAACCCATTTCCTTTCTTGTTTGAGGACAATTGGGTCCGTTTCTTTTACTCTCAGCTGGATTCCCACCTCCATTAATTTCTCTCAACTCTCTCTTAGGAGTTTGACGCTCGTGGATTGTAGTTTCAAGACTGATGGCTAAGAGTTACTTCAAGCAAGAGCATGATCTTGAGAAAAGAAAAGCAGAGGCTGCAAGGATTAGGGAGAAATATCCCGATAGAATTCCTGTTATTGTGGAGAAGGCAGAGAGAAGTGACATCCCTAGCATTGATAAGAAGAAATACCTAGTTCCTGCAGACCTTACTGTGGGACAGTTCGTTTATGTCATTCGTAAAAGGATTAAATTGAGCCCGGAGAAAGCGATCTTTATCTTCGTGGACAATGTCCTCCCTCCTACAGGTACAGCCTTTTCTTCTATAACATATTGGAGGGTATGTTTAGGACCACTTGAAAATGAAAGGCCGTCCCATAAACAAGTTCATTTAACAGATTTCGGTAACGATCATATCAATAATGTTGATTATGATCTATCATAAACGCCACACAGTTTTGACATAATGGGTACACATGGCACCTCAAATAACAATTATATCAAAGATAGCAGAAAATTTAATGAAAGGTCATGTTCAAAATTTCAAAAACTATATCGGTTTTATATGCAAGGATCAAGATCTATAACTTGTTGTATCCAACTTGCCTAAACAAACCACTTATTTTTTTCCTTGTTAAGGAGCAATCATGTCTGCAATATATGAAGAGAAGAAGGATGAAGATGGATTTCTGTATGTTACTTACAGTGGAGAGAACACATTTGGGTGGTAGCTGGCTTGTGTGGTAGACCTGATTGTTCTTAGATTTTCACTTCATTGCTATTGTCGCGGCCGTCGTTGTAGTCATCTTCCACTGTTCTCTCTGCCTCTTCCTTTTGCTGCTCCTTGTTCTTCCAGTTCTTCAAGGATTCTGGCAAGTGATACATTCTGTACAGCTCTACATAATGAATAAAATTTGTGAAAACATTTCCACGCCAAAAAGTTATTAATTGCTTCCAATATTGCTTTTATAATTCCTTTTGCCCCAAATTTTTTATGGGGTTTTTTTCTTCTGTTTATTGTAAAGATAAAATCTCTTACAAAAAAATCGTTTTTACTCATTAAAAAGATATTCCATCTACTCTTATAATAACCTCCCTAATATTATTCTCA

Coding sequence (CDS)

ATGGCTAAGAGTTACTTCAAGCAAGAGCATGATCTTGAGAAAAGAAAAGCAGAGGCTGCAAGGATTAGGGAGAAATATCCCGATAGAATTCCTGTTATTGTGGAGAAGGCAGAGAGAAGTGACATCCCTAGCATTGATAAGAAGAAATACCTAGTTCCTGCAGACCTTACTGTGGGACAGTTCGTTTATGTCATTCGTAAAAGGATTAAATTGAGCCCGGAGAAAGCGATCTTTATCTTCGTGGACAATGTCCTCCCTCCTACAGGTACAGCCTTTTCTTCTATAACATATTGGAGGGTATGTTTAGGACCACTTGAAAATGAAAGGCCGTCCCATAAACAAGTTCATTTAACAGATTTCGGTAACGATCATATCAATAATGTTGATTATGATCTATCATAA

Protein sequence

MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSITYWRVCLGPLENERPSHKQVHLTDFGNDHINNVDYDLS*
Homology
[Close]
BLAST of Cucsa.301880 vs. Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.9e-41
Identity = 85/95 (89.47%), Postives = 89/95 (93.68%), Query Frame = 1 

Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKS FKQEHDLEKR+AEAARIREKYPDRIPVIVEKAE+SDIP+IDKKKYLVPADLTVGQ
Sbjct: 1  MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLS EKAIFIFVDNVLPP G   SS+
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSV 95

[Close]
BLAST of Cucsa.301880 vs. Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.3e-37
Identity = 77/95 (81.05%), Postives = 85/95 (89.47%), Query Frame = 1 

Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MA S FK EH LEKR+AEAARIREKYPDRIPVIVE+AE+SD+P ID+KKYLVPADLTVGQ
Sbjct: 1  MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYV+RKRIKLSPEKAIFIFV N+LPPT    S+I
Sbjct: 61 FVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAI 95

[Close]
BLAST of Cucsa.301880 vs. Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=1 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 3.8e-37
Identity = 76/92 (82.61%), Postives = 84/92 (91.30%), Query Frame = 1 

Query: 4  SYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVY 63
          S FK ++D EKRKAEA RIREKYPDRIPVIVEKAE+S++P+IDKKKYLVP+DLTVGQFVY
Sbjct: 5  SIFKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVY 64

Query: 64 VIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          VIRKRIKLS EKAIFIFVDNVLPPTG   SS+
Sbjct: 65 VIRKRIKLSAEKAIFIFVDNVLPPTGELMSSV 96

[Close]
BLAST of Cucsa.301880 vs. Swiss-Prot
Match: ATG8G_ARATH (Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 6.5e-37
Identity = 76/95 (80.00%), Postives = 85/95 (89.47%), Query Frame = 1 

Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          M+   F+Q+HD EKRKAEA RIREKY DR+PVIVEK+E+SDIP+IDKKKYLVPADLTVGQ
Sbjct: 1  MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRI+LS EKAIFIFVDNVLPPTG   S+I
Sbjct: 61 FVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTI 95

[Close]
BLAST of Cucsa.301880 vs. Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 8.5e-37
Identity = 78/95 (82.11%), Postives = 83/95 (87.37%), Query Frame = 1 

Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKS FK +H LE+R+AEA RIREKY DRIPVIVEKAERSDIP IDKKKYLVPADLTVGQ
Sbjct: 1  MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYV+RKRIKLSPEKAIFIFV N LPPT    S+I
Sbjct: 61 FVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAI 95

[Close]
BLAST of Cucsa.301880 vs. TrEMBL
Match: A0A0A0KR95_CUCSA (Autophagy-related protein OS=Cucumis sativus GN=Csa_5G161950 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 9.4e-43
Identity = 91/95 (95.79%), Postives = 92/95 (96.84%), Query Frame = 1 

Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLSPEKAIFIFVDNVLPPTG   S+I
Sbjct: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAI 95

[Close]
BLAST of Cucsa.301880 vs. TrEMBL
Match: C6SX89_SOYBN (Autophagy-related protein OS=Glycine max GN=GLYMA_17G140700 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 8.0e-42
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 1 

Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1  MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLS EKAIFIFVDNVLPPTG   SSI
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSI 95

[Close]
BLAST of Cucsa.301880 vs. TrEMBL
Match: A0A0B2PQ48_GLYSO (Autophagy-related protein OS=Glycine soja GN=glysoja_017110 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 8.0e-42
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 1 

Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1  MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLS EKAIFIFVDNVLPPTG   SSI
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSI 95

[Close]
BLAST of Cucsa.301880 vs. TrEMBL
Match: I1MUZ8_SOYBN (Autophagy-related protein OS=Glycine max GN=GLYMA_17G140700 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 8.0e-42
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 1 

Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 7   MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 66

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
           FVYVIRKRIKLS EKAIFIFVDNVLPPTG   SSI
Sbjct: 67  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSI 101

[Close]
BLAST of Cucsa.301880 vs. TrEMBL
Match: B9GVG5_POPTR (Autophagy-related protein OS=Populus trichocarpa GN=POPTR_0003s11030g PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-41
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 1 

Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ
Sbjct: 1  MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLS EKAIFIFVDNVLPPTG   SSI
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSI 95

[Close]
BLAST of Cucsa.301880 vs. TAIR10
Match: AT4G16520.1 (AT4G16520.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 169.9 bits (429), Expect = 1.1e-42
Identity = 85/95 (89.47%), Postives = 89/95 (93.68%), Query Frame = 1 

Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKS FKQEHDLEKR+AEAARIREKYPDRIPVIVEKAE+SDIP+IDKKKYLVPADLTVGQ
Sbjct: 1  MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLS EKAIFIFVDNVLPP G   SS+
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSV 95

[Close]
BLAST of Cucsa.301880 vs. TAIR10
Match: AT2G45170.1 (AT2G45170.1 AUTOPHAGY 8E)

HSP 1 Score: 155.6 bits (392), Expect = 2.1e-38
Identity = 76/92 (82.61%), Postives = 84/92 (91.30%), Query Frame = 1 

Query: 4  SYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVY 63
          S FK ++D EKRKAEA RIREKYPDRIPVIVEKAE+S++P+IDKKKYLVP+DLTVGQFVY
Sbjct: 5  SIFKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVY 64

Query: 64 VIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          VIRKRIKLS EKAIFIFVDNVLPPTG   SS+
Sbjct: 65 VIRKRIKLSAEKAIFIFVDNVLPPTGELMSSV 96

[Close]
BLAST of Cucsa.301880 vs. TAIR10
Match: AT3G60640.1 (AT3G60640.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 154.8 bits (390), Expect = 3.7e-38
Identity = 76/95 (80.00%), Postives = 85/95 (89.47%), Query Frame = 1 

Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          M+   F+Q+HD EKRKAEA RIREKY DR+PVIVEK+E+SDIP+IDKKKYLVPADLTVGQ
Sbjct: 1  MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRI+LS EKAIFIFVDNVLPPTG   S+I
Sbjct: 61 FVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTI 95

[Close]
BLAST of Cucsa.301880 vs. TAIR10
Match: AT1G62040.2 (AT1G62040.2 Ubiquitin-like superfamily protein)

HSP 1 Score: 150.2 bits (378), Expect = 9.0e-37
Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 1 

Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MA S FK EH LE+R+ E++RIREKYPDRIPVIVE+AERSD+P+IDKKKYLVPADLTVGQ
Sbjct: 15  MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 74

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
           FVYV+RKRIKLS EKAIF+FV N LPPT    S+I
Sbjct: 75  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAI 109

[Close]
BLAST of Cucsa.301880 vs. TAIR10
Match: AT2G05630.2 (AT2G05630.2 Ubiquitin-like superfamily protein)

HSP 1 Score: 143.7 bits (361), Expect = 8.4e-35
Identity = 69/84 (82.14%), Postives = 78/84 (92.86%), Query Frame = 1 

Query: 12  LEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKL 71
           L+KR+AEAARIREKYPDRIPVIVE+AE+SD+P ID+KKYLVPADLTVGQFVYV+RKRIKL
Sbjct: 56  LKKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKL 115

Query: 72  SPEKAIFIFVDNVLPPTGTAFSSI 96
           SPEKAIFIFV N+LPPT    S+I
Sbjct: 116 SPEKAIFIFVKNILPPTAAIMSAI 139

[Close]
BLAST of Cucsa.301880 vs. NCBI nr
Match: gi|449469398|ref|XP_004152407.1| (PREDICTED: autophagy-related protein 8f [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-42
Identity = 91/95 (95.79%), Postives = 92/95 (96.84%), Query Frame = 1 

Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLSPEKAIFIFVDNVLPPTG   S+I
Sbjct: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAI 95

[Close]
BLAST of Cucsa.301880 vs. NCBI nr
Match: gi|947054658|gb|KRH04111.1| (hypothetical protein GLYMA_17G140700 [Glycine max])

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-41
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 1 

Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 7   MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 66

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
           FVYVIRKRIKLS EKAIFIFVDNVLPPTG   SSI
Sbjct: 67  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSI 101

[Close]
BLAST of Cucsa.301880 vs. NCBI nr
Match: gi|351727823|ref|NP_001236662.1| (uncharacterized protein LOC100499835 [Glycine max])

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-41
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 1 

Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1  MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLS EKAIFIFVDNVLPPTG   SSI
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSI 95

[Close]
BLAST of Cucsa.301880 vs. NCBI nr
Match: gi|357476885|ref|XP_003608728.1| (gaba-receptor-associated protein ubiquitin domain protein [Medicago truncatula])

HSP 1 Score: 176.8 bits (447), Expect = 2.5e-41
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 1 

Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1  MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLS EKAIFIFVDNVLPPTG   S+I
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAI 95

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BLAST of Cucsa.301880 vs. NCBI nr
Match: gi|224071541|ref|XP_002303509.1| (autophagy 8g family protein [Populus trichocarpa])

HSP 1 Score: 176.8 bits (447), Expect = 2.5e-41
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 1 

Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ
Sbjct: 1  MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLS EKAIFIFVDNVLPPTG   SSI
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSI 95

The following BLAST results are available for this feature:
BLAST of Cucsa.301880 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATG8F_ARATH1.9e-4189.47Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=1 SV=1[more]
ATG8D_ARATH1.3e-3781.05Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1[more]
ATG8E_ARATH3.8e-3782.61Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=1 SV=2[more]
ATG8G_ARATH6.5e-3780.00Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1[more]
ATG8B_ORYSI8.5e-3782.11Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1[more]
BLAST of Cucsa.301880 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KR95_CUCSA9.4e-4395.79Autophagy-related protein OS=Cucumis sativus GN=Csa_5G161950 PE=3 SV=1[more]
C6SX89_SOYBN8.0e-4294.74Autophagy-related protein OS=Glycine max GN=GLYMA_17G140700 PE=2 SV=1[more]
A0A0B2PQ48_GLYSO8.0e-4294.74Autophagy-related protein OS=Glycine soja GN=glysoja_017110 PE=3 SV=1[more]
I1MUZ8_SOYBN8.0e-4294.74Autophagy-related protein OS=Glycine max GN=GLYMA_17G140700 PE=3 SV=1[more]
B9GVG5_POPTR1.8e-4193.68Autophagy-related protein OS=Populus trichocarpa GN=POPTR_0003s11030g PE=3 SV=1[more]
BLAST of Cucsa.301880 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16520.11.1e-4289.47 Ubiquitin-like superfamily protein[more]
AT2G45170.12.1e-3882.61 AUTOPHAGY 8E[more]
AT3G60640.13.7e-3880.00 Ubiquitin-like superfamily protein[more]
AT1G62040.29.0e-3776.84 Ubiquitin-like superfamily protein[more]
AT2G05630.28.4e-3582.14 Ubiquitin-like superfamily protein[more]
BLAST of Cucsa.301880 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469398|ref|XP_004152407.1|1.3e-4295.79PREDICTED: autophagy-related protein 8f [Cucumis sativus][more]
gi|947054658|gb|KRH04111.1|1.1e-4194.74hypothetical protein GLYMA_17G140700 [Glycine max][more]
gi|351727823|ref|NP_001236662.1|1.1e-4194.74uncharacterized protein LOC100499835 [Glycine max][more]
gi|357476885|ref|XP_003608728.1|2.5e-4193.68gaba-receptor-associated protein ubiquitin domain protein [Medicago truncatula][more]
gi|224071541|ref|XP_002303509.1|2.5e-4193.68autophagy 8g family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004241Atg8-like
IPR004241Atg8-like
IPR004241Atg8-like
IPR004241Atg8-like
IPR004241Atg8-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006914 autophagy
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.301880.1Cucsa.301880.1mRNA
Cucsa.301880.3Cucsa.301880.3mRNA
Cucsa.301880.4Cucsa.301880.4mRNA
Cucsa.301880.5Cucsa.301880.5mRNA
Cucsa.301880.2Cucsa.301880.2mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004241Autophagy protein Atg8 ubiquitin-likePANTHERPTHR10969MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATEDcoord: 1..117
score: 3.7
IPR004241Autophagy protein Atg8 ubiquitin-likePFAMPF02991Atg8coord: 14..117
score: 2.2
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 3..117
score: 2.9
NoneNo IPR availablePANTHERPTHR10969:SF39AUTOPHAGY-RELATED PROTEIN 8Fcoord: 1..117
score: 3.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.301880Cla011578Watermelon (97103) v1cgywmB552
Cucsa.301880Csa5G161950Cucumber (Chinese Long) v2cgycuB434
Cucsa.301880MELO3C005538Melon (DHL92) v3.5.1cgymeB495
Cucsa.301880ClCG01G003980Watermelon (Charleston Gray)cgywcgB520
Cucsa.301880CSPI05G06760Wild cucumber (PI 183967)cgycpiB457
Cucsa.301880CmaCh15G011270Cucurbita maxima (Rimu)cgycmaB0830
Cucsa.301880CmaCh02G015440Cucurbita maxima (Rimu)cgycmaB0835
Cucsa.301880CmoCh02G015870Cucurbita moschata (Rifu)cgycmoB0830
Cucsa.301880CmoCh15G011860Cucurbita moschata (Rifu)cgycmoB0824
Cucsa.301880Lsi09G004180Bottle gourd (USVL1VR-Ls)cgylsiB487
Cucsa.301880Cp4.1LG13g02370Cucurbita pepo (Zucchini)cgycpeB0789
Cucsa.301880Cp4.1LG05g02440Cucurbita pepo (Zucchini)cgycpeB0794
Cucsa.301880MELO3C005538.2Melon (DHL92) v3.6.1cgymedB494
Cucsa.301880CsaV3_5G004160Cucumber (Chinese Long) v3cgycucB470
Cucsa.301880Cla97C01G004150Watermelon (97103) v2cgywmbB520
Cucsa.301880Bhi12G000412Wax gourdcgywgoB604
Cucsa.301880Carg23209Silver-seed gourdcarcgyB0621
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.301880Silver-seed gourdcarcgyB1045
Cucsa.301880Cucumber (Chinese Long) v3cgycucB465
Cucsa.301880Watermelon (97103) v2cgywmbB521
Cucsa.301880Cucumber (Gy14) v1cgycgyB141
Cucsa.301880Cucurbita maxima (Rimu)cgycmaB0839
Cucsa.301880Cucurbita moschata (Rifu)cgycmoB0834
Cucsa.301880Wild cucumber (PI 183967)cgycpiB452
Cucsa.301880Cucumber (Chinese Long) v2cgycuB429
Cucsa.301880Melon (DHL92) v3.5.1cgymeB498
Cucsa.301880Watermelon (Charleston Gray)cgywcgB519
Cucsa.301880Watermelon (97103) v1cgywmB547
Cucsa.301880Cucurbita pepo (Zucchini)cgycpeB0796
Cucsa.301880Bottle gourd (USVL1VR-Ls)cgylsiB491