Cucsa.301880.4 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.301880.4
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Autophagy-related protein
Location	scaffold02951 : 118667 .. 121514 (+)
Sequence length	984

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTTTTAAAAATAAGAAAAATTATTGAACACCGAACCAACGCCACCGTGAAGGCTTCACTCTCTTTTTATCTGTAATTCAATCAAAGCTCGATTCTCGCAAAATTTCTCGCCCAAAACCCATTTCCTTTCTTGTTTGAGGACAATTGGGTCCGTTTCTTTTACTCTCAGCTGGATTCCCACCTCCATTAATTTCTCTCAACTCTCTCTTAGGTTTGTTCTTTTTCTCTCCATGATCCTTGATTATTTTTGTTAGTTCTTCTCTCATCTACTTCTCAATCTATCTGCTGAATTTCTTTTTCCTTATTTCTTCCGTTGTTTCTTGTCGTCTGATGATTCAATGTTTGAATTTGATTCCCTCAGTTTAATTTCTTTTTCTTGTTGTTTGTTGATTGGGAAAGTTGTAAGAGTTTGTTGGGGCTGTCGAGTTTACCGGACTAGTGAAATTCTAGGTGGTTTTAATTGATAAGTGTGCTATTCTGTTGGTCACGATTATTTTTTtCCGTTAATTATGGCGATTTTTAGATTTTTATTTGTTGGGTTTTGATTGTGTTGTTCTTATTTTCCGcTTTCCCAGTTTCCCCAAcTTTCTAAAaTTCTGGAGTtGtCTTTTTTTTTTTTTTtttnTtttttttttGAATTTAAATTGAAGGAGTTTGACGCTCGTGGATTGTAGTTTCAAGACTGATGGCTAAGAGTTACTTCAAGCAAGAGCATGATCTTGGTAGTCTTCTTCTCTATGTTTCCAAAATGCTTTTCTTTTTCCCTTGGTATTATACTAAATCCATTTTGTAAGATAAGAACTGATGAGTTTTCCATGTTTGTTTTATTAGAGAAAAGAAAAGCAGAGGCTGCAAGGATTAGGGAGAAATATCCCGATAGAATTCCTGTAAGAAATGAATTTATTTTGTTACCGTGATTTGATTGGCTATTGGTTATTATCAACTTtAAATTCAGAATCTCAGAATTTGTTTTGCCAAAGCGTTGATGTTATTGTTCTTTTTAACTTCCTCTGATTGATGAATGAGTCGAATTTTTTCTGAATTTCCTTATCATCCATTGCCAGTATCCTTTTTCTTTCGTATTCATTTGGTAAGGAAGCAATCAGTTATTATTATTATTTTTTAGTTCAACGACATATGGTTGACAAGAAACTATCAGTTATTGATAATGTTGTCTTTGATTTCTTTCTGGACAACAGACGGTGATGATTATGTTGTTACTGATTTGATTTAGCAAGGGGGTTGTGTATAAGCAGTAGAGAGGAAGTGTGTTTTAAGAATAAAATGTCTCAAAATGAAGGCATCTGTTGTATTTTTGTTTGCGCACATGTTTCAGCATTTCATCAGTTACTGCTTGGTTATATAATCATGTTCTTATTGTTTCAAGGTTATTGTGGAGAAGGCAGAGAGAAGTGACATCCCTAGCATTGATAAGAAGAAGTAAGTACACCGACATTCATTTTGTAGTTATTCGTTGTAGTTATCTTTTCTTTTATGTAGATGTATATCAATTAAAGTCGGAGGAAACTTTGAAGAAATATTATTTAGGGAAGTATTCTGTGTTCAACTCTTTTTCATCTAAGGAAACATAGCTACTGGTAGCTGAGAATTGAATTTTCTTTCTTCTATGTTAGAATTTATGTTCAATGATAGACTGTTTTTCGTTATCTTTTCTCTTTTTGTCTTTTGATTGATGTTCGATGAGCTGAACACGCAAGCAGTCTTACTGGAAGCTCTTTTTCATCTCTTTGAAAGTGGCGTTTATTTAACTTTTAAAATTATGTTCCTGTTTTCTTCTCATAGTTCTGTTGTCTATTTGCTTTATATATACAATTCATTTCAAAACCACAAGGGGAAAATGACCAATTGACAATCCTTCACCTCTTTCTCTTTCTATACCTAAGATTTTGATGTAATGACTGCAGATACCTAGTTCCTGCAGACCTTACTGTGGGACAGTTCGTTTATGTCATTCGTAAAAGGATTAAATTGAGCCCGGAGAAAGCGATCTTTATCTTCGTGGACAATGTCCTCCCTCCTACAGGTACAGCCTTTTCTTCTATAACATATTGGAGGGTATGTTTAGGACCACTTGAAAATGAAAGGCCGTCCCATAAACAAGTTCATTTAACAGATTTCGGTAACGATCATATCAATAATGTTGATTATGATCTATCATAAACGCCACACAGTTTTGACATAATGGGTACACATGGCACCTCAAATAACAATTATATCAAAGATAGCAGAAAATTTAATGAAAGGTCATGTTCAAAATTTCAAAAACTATATCGGTTTTATATGCAAGGATCAAGATCTATAACTTGTTGTATCCAACTTGCCTAAACAAACCACTTATTTTTTTCCTtGTTAAGGAGCAATCATGTCTGCAATATATGAAGAGAAGAAGGATGAAGATGGATTTCTGTATGTTACTTACAGTGGAGAGAACACATTTGGGTGGTAGCTGGCTTGTGTGGTAGACCTGATTGTTCTTAGATTTTCACTTCATTGCTATTGTCGCGGCCGTCGTTGTAGTCATCTTCCACTGTTCTCTCTGCCTCTTCCTTTTGCTGCTCCTTGTTCTTCCAGTTCTTCAAGGATTCTGGCAAGTGATACATTCTGTACAGCTCTACATAATGAATAAAATTTGTGAAAACATTTCCACGCCAAAAAGTTATTAATTGCTTCCAATATTGCTTTTATAATTCCTTTTGCCCCAAATTTTTTATGGGGTTTTTTtCTTCTGTTTATTGTAAAGATAAAATCTCTTACAAAAAAATCGTTTTTACTCATTAAAAAGATATTCCATCTACTCTTATAATAACCTCCCTAATATTATTCTCA

mRNA sequence

TGGTTTTAAAAATAAGAAAAATTATTGAACACCGAACCAACGCCACCGTGAAGGCTTCACTCTCTTTTTATCTGTAATTCAATCAAAGCTCGATTCTCGCAAAATTTCTCGCCCAAAACCCATTTCCTTTCTTGTTTGAGGACAATTGGGTCCGTTTCTTTTACTCTCAGCTGGATTCCCACCTCCATTAATTTCTCTCAACTCTCTCTTAGGAGTTTGACGCTCGTGGATTGTAGTTTCAAGACTGATGGCTAAGAGTTACTTCAAGCAAGAGCATGATCTTGAGAAAAGAAAAGCAGAGGCTGCAAGGATTAGGGAGAAATATCCCGATAGAATTCCTGTTATTGTGGAGAAGGCAGAGAGAAGTGACATCCCTAGCATTGATAAGAAGAAATACCTAGTTCCTGCAGACCTTACTGTGGGACAGTTCGTTTATGTCATTCGTAAAAGGATTAAATTGAGCCCGGAGAAAGCGATCTTTATCTTCGTGGACAATGTCCTCCCTCCTACAGGAGCAATCATGTCTGCAATATATGAAGAGAAGAAGGATGAAGATGGATTTCTGTATGTTACTTACAGTGGAGAGAACACATTTGGGTGGTAGCTGGCTTGTGTGGTAGACCTGATTGTTCTTAGATTTTCACTTCATTGCTATTGTCGCGGCCGTCGTTGTAGTCATCTTCCACTGTTCTCTCTGCCTCTTCCTTTTGCTGCTCCTTGTTCTTCCAGTTCTTCAAGGATTCTGGCAAGTGATACATTCTGTACAGCTCTACATAATGAATAAAATTTGTGAAAACATTTCCACGCCAAAAAGTTATTAATTGCTTCCAATATTGCTTTTATAATTCCTTTTGCCCCAAATTTTTTATGGGGTTTTTTTCTTCTGTTTATTGTAAAGATAAAATCTCTTACAAAAAAATCGTTTTTACTCATTAAAAAGATATTCCATCTACTCTTATAATAACCTCCCTAATATTATTCTCA

Coding sequence (CDS)

ATGGCTAAGAGTTACTTCAAGCAAGAGCATGATCTTGAGAAAAGAAAAGCAGAGGCTGCAAGGATTAGGGAGAAATATCCCGATAGAATTCCTGTTATTGTGGAGAAGGCAGAGAGAAGTGACATCCCTAGCATTGATAAGAAGAAATACCTAGTTCCTGCAGACCTTACTGTGGGACAGTTCGTTTATGTCATTCGTAAAAGGATTAAATTGAGCCCGGAGAAAGCGATCTTTATCTTCGTGGACAATGTCCTCCCTCCTACAGGAGCAATCATGTCTGCAATATATGAAGAGAAGAAGGATGAAGATGGATTTCTGTATGTTACTTACAGTGGAGAGAACACATTTGGGTGGTAG

Protein sequence

MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW*

Homology

[Close]

BLAST of Cucsa.301880.4 vs. Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 2.5e-56
Identity = 107/118 (90.68%), Postives = 115/118 (97.46%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKS FKQEHDLEKR+AEAARIREKYPDRIPVIVEKAE+SDIP+IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW 119
           FVYVIRKRIKLS EKAIFIFVDNVLPP GA+MS++YEEKKD+DGFLYVTYSGENTFG+
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGF 118

[Close]

BLAST of Cucsa.301880.4 vs. Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 3.7e-52
Identity = 100/117 (85.47%), Postives = 109/117 (93.16%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MA S FK EH LEKR+AEAARIREKYPDRIPVIVE+AE+SD+P ID+KKYLVPADLTVGQ
Sbjct: 1   MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           FVYV+RKRIKLSPEKAIFIFV N+LPPT AIMSAIYEE KDEDGFLY++YSGENTFG
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of Cucsa.301880.4 vs. Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2)

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-51
Identity = 101/117 (86.32%), Postives = 107/117 (91.45%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKS FK +H LE+R+AEA RIREKY DRIPVIVEKAERSDIP IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           FVYV+RKRIKLSPEKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Cucsa.301880.4 vs. Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-51
Identity = 101/117 (86.32%), Postives = 107/117 (91.45%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKS FK +H LE+R+AEA RIREKY DRIPVIVEKAERSDIP IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           FVYV+RKRIKLSPEKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Cucsa.301880.4 vs. Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-51
Identity = 101/117 (86.32%), Postives = 107/117 (91.45%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MA+S FK EH LE+R+AEA RIREKYPDRIPVIVEKAERSDIP IDKKKYLVPADLTVGQ
Sbjct: 1   MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           FVYV+RKRIKLS EKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Cucsa.301880.4 vs. TrEMBL
Match: A0A0A0KR95_CUCSA (Autophagy-related protein OS=Cucumis sativus GN=Csa_5G161950 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 4.4e-60
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW 119
           FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW
Sbjct: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW 118

[Close]

BLAST of Cucsa.301880.4 vs. TrEMBL
Match: M5WB44_PRUPE (Autophagy-related protein OS=Prunus persica GN=PRUPE_ppa013435mg PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.0e-57
Identity = 114/118 (96.61%), Postives = 117/118 (99.15%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW 119
           FVYVIRKRIKLS EKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG+
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGY 118

[Close]

BLAST of Cucsa.301880.4 vs. TrEMBL
Match: Q8L5F9_CICAR (Autophagy-related protein OS=Cicer arietinum GN=map PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.5e-57
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           FVYVIRKRIKLS EKAIFIFVDNVLPPTGAIMSAIY+EKKDEDGFLYVTYSGENTFG
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFG 117

[Close]

BLAST of Cucsa.301880.4 vs. TrEMBL
Match: A0A0B0NJ64_GOSAR (Autophagy-related protein OS=Gossypium arboreum GN=F383_17573 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.5e-57
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           FVYVIRKRIKLS EKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 117

[Close]

BLAST of Cucsa.301880.4 vs. TrEMBL
Match: A0A067F249_CITSI (Autophagy-related protein OS=Citrus sinensis GN=CISIN_1g033114mg PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.5e-57
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ
Sbjct: 6   MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 65

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           FVYVIRKRIKLS EKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG
Sbjct: 66  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 122

[Close]

BLAST of Cucsa.301880.4 vs. TAIR10
Match: AT4G16520.1 (AT4G16520.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 219.2 bits (557), Expect = 1.4e-57
Identity = 107/118 (90.68%), Postives = 115/118 (97.46%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKS FKQEHDLEKR+AEAARIREKYPDRIPVIVEKAE+SDIP+IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW 119
           FVYVIRKRIKLS EKAIFIFVDNVLPP GA+MS++YEEKKD+DGFLYVTYSGENTFG+
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGF 118

[Close]

BLAST of Cucsa.301880.4 vs. TAIR10
Match: AT2G45170.1 (AT2G45170.1 AUTOPHAGY 8E)

HSP 1 Score: 202.6 bits (514), Expect = 1.4e-52
Identity = 96/114 (84.21%), Postives = 108/114 (94.74%), Query Frame = 1


Query: 4   SYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVY 63
           S FK ++D EKRKAEA RIREKYPDRIPVIVEKAE+S++P+IDKKKYLVP+DLTVGQFVY
Sbjct: 5   SIFKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVY 64

Query: 64  VIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           VIRKRIKLS EKAIFIFVDNVLPPTG +MS++YE+KKDEDGFLY+TYSGENTFG
Sbjct: 65  VIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFG 118

[Close]

BLAST of Cucsa.301880.4 vs. TAIR10
Match: AT3G60640.1 (AT3G60640.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 200.7 bits (509), Expect = 5.2e-52
Identity = 97/117 (82.91%), Postives = 108/117 (92.31%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           M+   F+Q+HD EKRKAEA RIREKY DR+PVIVEK+E+SDIP+IDKKKYLVPADLTVGQ
Sbjct: 1   MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           FVYVIRKRI+LS EKAIFIFVDNVLPPTGA+MS IY+E K+EDGFLYVTYSGENTFG
Sbjct: 61  FVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFG 117

[Close]

BLAST of Cucsa.301880.4 vs. TAIR10
Match: AT1G62040.2 (AT1G62040.2 Ubiquitin-like superfamily protein)

HSP 1 Score: 198.0 bits (502), Expect = 3.3e-51
Identity = 95/117 (81.20%), Postives = 107/117 (91.45%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MA S FK EH LE+R+ E++RIREKYPDRIPVIVE+AERSD+P+IDKKKYLVPADLTVGQ
Sbjct: 15  MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 74

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           FVYV+RKRIKLS EKAIF+FV N LPPT A+MSAIY+E KDEDGFLY+TYSGENTFG
Sbjct: 75  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 131

[Close]

BLAST of Cucsa.301880.4 vs. TAIR10
Match: AT2G05630.2 (AT2G05630.2 Ubiquitin-like superfamily protein)

HSP 1 Score: 191.8 bits (486), Expect = 2.4e-49
Identity = 92/106 (86.79%), Postives = 102/106 (96.23%), Query Frame = 1


Query: 12  LEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKL 71
           L+KR+AEAARIREKYPDRIPVIVE+AE+SD+P ID+KKYLVPADLTVGQFVYV+RKRIKL
Sbjct: 56  LKKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKL 115

Query: 72  SPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           SPEKAIFIFV N+LPPT AIMSAIYEE KDEDGFLY++YSGENTFG
Sbjct: 116 SPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 161

[Close]

BLAST of Cucsa.301880.4 vs. NCBI nr
Match: gi|449469398|ref|XP_004152407.1| (PREDICTED: autophagy-related protein 8f [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 6.3e-60
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW 119
           FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW
Sbjct: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW 118

[Close]

BLAST of Cucsa.301880.4 vs. NCBI nr
Match: gi|694391718|ref|XP_009371370.1| (PREDICTED: autophagy-related protein 8f [Pyrus x bretschneideri])

HSP 1 Score: 229.6 bits (584), Expect = 2.9e-57
Identity = 114/118 (96.61%), Postives = 117/118 (99.15%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW 119
           FVYVIRKRIKLS EKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG+
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGY 118

[Close]

BLAST of Cucsa.301880.4 vs. NCBI nr
Match: gi|1012128896|ref|XP_015964416.1| (PREDICTED: autophagy-related protein 8f [Arachis duranensis])

HSP 1 Score: 229.6 bits (584), Expect = 2.9e-57
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           FVYVIRKRIKLS EKAIFIFVDNVLPPTGAIMSA+YEEKKDEDGFLYVTYSGENTFG
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAVYEEKKDEDGFLYVTYSGENTFG 117

[Close]

BLAST of Cucsa.301880.4 vs. NCBI nr
Match: gi|595849647|ref|XP_007209768.1| (hypothetical protein PRUPE_ppa013435mg [Prunus persica])

HSP 1 Score: 229.6 bits (584), Expect = 2.9e-57
Identity = 114/118 (96.61%), Postives = 117/118 (99.15%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW 119
           FVYVIRKRIKLS EKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG+
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGY 118

[Close]

BLAST of Cucsa.301880.4 vs. NCBI nr
Match: gi|658024346|ref|XP_008347578.1| (PREDICTED: autophagy-related protein 8f [Malus domestica])

HSP 1 Score: 229.2 bits (583), Expect = 3.8e-57
Identity = 113/118 (95.76%), Postives = 117/118 (99.15%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ
Sbjct: 45  MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 104

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW 119
           FVYVIRKRIKLS EKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY+TYSGENTFG+
Sbjct: 105 FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYITYSGENTFGY 162

The following BLAST results are available for this feature:

BLAST of Cucsa.301880.4 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATG8F_ARATH	2.5e-56	90.68	Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=1 SV=1	[more]
ATG8D_ARATH	3.7e-52	85.47	Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1	[more]
ATG8B_ORYSJ	1.1e-51	86.32	Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2	[more]
ATG8B_ORYSI	1.1e-51	86.32	Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1	[more]
ATG8C_ORYSJ	1.1e-51	86.32	Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1	[more]

BLAST of Cucsa.301880.4 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR95_CUCSA	4.4e-60	100.00	Autophagy-related protein OS=Cucumis sativus GN=Csa_5G161950 PE=3 SV=1	[more]
M5WB44_PRUPE	2.0e-57	96.61	Autophagy-related protein OS=Prunus persica GN=PRUPE_ppa013435mg PE=3 SV=1	[more]
Q8L5F9_CICAR	3.5e-57	97.44	Autophagy-related protein OS=Cicer arietinum GN=map PE=2 SV=1	[more]
A0A0B0NJ64_GOSAR	3.5e-57	97.44	Autophagy-related protein OS=Gossypium arboreum GN=F383_17573 PE=3 SV=1	[more]
A0A067F249_CITSI	3.5e-57	97.44	Autophagy-related protein OS=Citrus sinensis GN=CISIN_1g033114mg PE=3 SV=1	[more]

BLAST of Cucsa.301880.4 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16520.1	1.4e-57	90.68	Ubiquitin-like superfamily protein	[more]
AT2G45170.1	1.4e-52	84.21	AUTOPHAGY 8E	[more]
AT3G60640.1	5.2e-52	82.91	Ubiquitin-like superfamily protein	[more]
AT1G62040.2	3.3e-51	81.20	Ubiquitin-like superfamily protein	[more]
AT2G05630.2	2.4e-49	86.79	Ubiquitin-like superfamily protein	[more]

BLAST of Cucsa.301880.4 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449469398\|ref\|XP_004152407.1\|	6.3e-60	100.00	PREDICTED: autophagy-related protein 8f [Cucumis sativus]	[more]
gi\|694391718\|ref\|XP_009371370.1\|	2.9e-57	96.61	PREDICTED: autophagy-related protein 8f [Pyrus x bretschneideri]	[more]
gi\|1012128896\|ref\|XP_015964416.1\|	2.9e-57	97.44	PREDICTED: autophagy-related protein 8f [Arachis duranensis]	[more]
gi\|595849647\|ref\|XP_007209768.1\|	2.9e-57	96.61	hypothetical protein PRUPE_ppa013435mg [Prunus persica]	[more]
gi\|658024346\|ref\|XP_008347578.1\|	3.8e-57	95.76	PREDICTED: autophagy-related protein 8f [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004241	Atg8-like

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.301880	Cucsa.301880	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.301880.4	Cucsa.301880.4-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.301880.4.five_prime_UTR.1	Cucsa.301880.4.five_prime_UTR.1	five_prime_UTR
Cucsa.301880.4.five_prime_UTR.2	Cucsa.301880.4.five_prime_UTR.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.301880.4.CDS.1	Cucsa.301880.4.CDS.1	CDS
Cucsa.301880.4.CDS.2	Cucsa.301880.4.CDS.2	CDS
Cucsa.301880.4.CDS.3	Cucsa.301880.4.CDS.3	CDS
Cucsa.301880.4.CDS.4	Cucsa.301880.4.CDS.4	CDS
Cucsa.301880.4.CDS.5	Cucsa.301880.4.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.301880.4.three_prime_UTR.1	Cucsa.301880.4.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 1..117 score: 3.7
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 14..117 score: 2.2
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 3..117 score: 2.9
None	No IPR available	PANTHER	PTHR10969:SF39	AUTOPHAGY-RELATED PROTEIN 8F	coord: 1..117 score: 3.7