Cucsa.301880.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.301880.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Autophagy-related protein
Location	scaffold02951 : 118667 .. 121514 (+)
Sequence length	1315

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTTTTAAAAATAAGAAAAATTATTGAACACCGAACCAACGCCACCGTGAAGGCTTCACTCTCTTTTTATCTGTAATTCAATCAAAGCTCGATTCTCGCAAAATTTCTCGCCCAAAACCCATTTCCTTTCTTGTTTGAGGACAATTGGGTCCGTTTCTTTTACTCTCAGCTGGATTCCCACCTCCATTAATTTCTCTCAACTCTCTCTTAGGTTTGTTCTTTTTCTCTCCATGATCCTTGATTATTTTTGTTAGTTCTTCTCTCATCTACTTCTCAATCTATCTGCTGAATTTCTTTTTCCTTATTTCTTCCGTTGTTTCTTGTCGTCTGATGATTCAATGTTTGAATTTGATTCCCTCAGTTTAATTTCTTTTTCTTGTTGTTTGTTGATTGGGAAAGTTGTAAGAGTTTGTTGGGGCTGTCGAGTTTACCGGACTAGTGAAATTCTAGGTGGTTTTAATTGATAAGTGTGCTATTCTGTTGGTCACGATTATTTTTTtCCGTTAATTATGGCGATTTTTAGATTTTTATTTGTTGGGTTTTGATTGTGTTGTTCTTATTTTCCGcTTTCCCAGTTTCCCCAAcTTTCTAAAaTTCTGGAGTtGtCTTTTTTTTTTTTTTtttnTtttttttttGAATTTAAATTGAAGGAGTTTGACGCTCGTGGATTGTAGTTTCAAGACTGATGGCTAAGAGTTACTTCAAGCAAGAGCATGATCTTGGTAGTCTTCTTCTCTATGTTTCCAAAATGCTTTTCTTTTTCCCTTGGTATTATACTAAATCCATTTTGTAAGATAAGAACTGATGAGTTTTCCATGTTTGTTTTATTAGAGAAAAGAAAAGCAGAGGCTGCAAGGATTAGGGAGAAATATCCCGATAGAATTCCTGTAAGAAATGAATTTATTTTGTTACCGTGATTTGATTGGCTATTGGTTATTATCAACTTtAAATTCAGAATCTCAGAATTTGTTTTGCCAAAGCGTTGATGTTATTGTTCTTTTTAACTTCCTCTGATTGATGAATGAGTCGAATTTTTTCTGAATTTCCTTATCATCCATTGCCAGTATCCTTTTTCTTTCGTATTCATTTGGTAAGGAAGCAATCAGTTATTATTATTATTTTTTAGTTCAACGACATATGGTTGACAAGAAACTATCAGTTATTGATAATGTTGTCTTTGATTTCTTTCTGGACAACAGACGGTGATGATTATGTTGTTACTGATTTGATTTAGCAAGGGGGTTGTGTATAAGCAGTAGAGAGGAAGTGTGTTTTAAGAATAAAATGTCTCAAAATGAAGGCATCTGTTGTATTTTTGTTTGCGCACATGTTTCAGCATTTCATCAGTTACTGCTTGGTTATATAATCATGTTCTTATTGTTTCAAGGTTATTGTGGAGAAGGCAGAGAGAAGTGACATCCCTAGCATTGATAAGAAGAAGTAAGTACACCGACATTCATTTTGTAGTTATTCGTTGTAGTTATCTTTTCTTTTATGTAGATGTATATCAATTAAAGTCGGAGGAAACTTTGAAGAAATATTATTTAGGGAAGTATTCTGTGTTCAACTCTTTTTCATCTAAGGAAACATAGCTACTGGTAGCTGAGAATTGAATTTTCTTTCTTCTATGTTAGAATTTATGTTCAATGATAGACTGTTTTTCGTTATCTTTTCTCTTTTTGTCTTTTGATTGATGTTCGATGAGCTGAACACGCAAGCAGTCTTACTGGAAGCTCTTTTTCATCTCTTTGAAAGTGGCGTTTATTTAACTTTTAAAATTATGTTCCTGTTTTCTTCTCATAGTTCTGTTGTCTATTTGCTTTATATATACAATTCATTTCAAAACCACAAGGGGAAAATGACCAATTGACAATCCTTCACCTCTTTCTCTTTCTATACCTAAGATTTTGATGTAATGACTGCAGATACCTAGTTCCTGCAGACCTTACTGTGGGACAGTTCGTTTATGTCATTCGTAAAAGGATTAAATTGAGCCCGGAGAAAGCGATCTTTATCTTCGTGGACAATGTCCTCCCTCCTACAGGTACAGCCTTTTCTTCTATAACATATTGGAGGGTATGTTTAGGACCACTTGAAAATGAAAGGCCGTCCCATAAACAAGTTCATTTAACAGATTTCGGTAACGATCATATCAATAATGTTGATTATGATCTATCATAAACGCCACACAGTTTTGACATAATGGGTACACATGGCACCTCAAATAACAATTATATCAAAGATAGCAGAAAATTTAATGAAAGGTCATGTTCAAAATTTCAAAAACTATATCGGTTTTATATGCAAGGATCAAGATCTATAACTTGTTGTATCCAACTTGCCTAAACAAACCACTTATTTTTTTCCTtGTTAAGGAGCAATCATGTCTGCAATATATGAAGAGAAGAAGGATGAAGATGGATTTCTGTATGTTACTTACAGTGGAGAGAACACATTTGGGTGGTAGCTGGCTTGTGTGGTAGACCTGATTGTTCTTAGATTTTCACTTCATTGCTATTGTCGCGGCCGTCGTTGTAGTCATCTTCCACTGTTCTCTCTGCCTCTTCCTTTTGCTGCTCCTTGTTCTTCCAGTTCTTCAAGGATTCTGGCAAGTGATACATTCTGTACAGCTCTACATAATGAATAAAATTTGTGAAAACATTTCCACGCCAAAAAGTTATTAATTGCTTCCAATATTGCTTTTATAATTCCTTTTGCCCCAAATTTTTTATGGGGTTTTTTtCTTCTGTTTATTGTAAAGATAAAATCTCTTACAAAAAAATCGTTTTTACTCATTAAAAAGATATTCCATCTACTCTTATAATAACCTCCCTAATATTATTCTCA

mRNA sequence

TGGTTTTAAAAATAAGAAAAATTATTGAACACCGAACCAACGCCACCGTGAAGGCTTCACTCTCTTTTTATCTGTAATTCAATCAAAGCTCGATTCTCGCAAAATTTCTCGCCCAAAACCCATTTCCTTTCTTGTTTGAGGACAATTGGGTCCGTTTCTTTTACTCTCAGCTGGATTCCCACCTCCATTAATTTCTCTCAACTCTCTCTTAGGAGTTTGACGCTCGTGGATTGTAGTTTCAAGACTGATGGCTAAGAGTTACTTCAAGCAAGAGCATGATCTTGAGAAAAGAAAAGCAGAGGCTGCAAGGATTAGGGAGAAATATCCCGATAGAATTCCTGTTATTGTGGAGAAGGCAGAGAGAAGTGACATCCCTAGCATTGATAAGAAGAAATACCTAGTTCCTGCAGACCTTACTGTGGGACAGTTCGTTTATGTCATTCGTAAAAGGATTAAATTGAGCCCGGAGAAAGCGATCTTTATCTTCGTGGACAATGTCCTCCCTCCTACAGGTACAGCCTTTTCTTCTATAACATATTGGAGGGTATGTTTAGGACCACTTGAAAATGAAAGGCCGTCCCATAAACAAGTTCATTTAACAGATTTCGGTAACGATCATATCAATAATGTTGATTATGATCTATCATAAACGCCACACAGTTTTGACATAATGGGTACACATGGCACCTCAAATAACAATTATATCAAAGATAGCAGAAAATTTAATGAAAGGTCATGTTCAAAATTTCAAAAACTATATCGGTTTTATATGCAAGGATCAAGATCTATAACTTGTTGTATCCAACTTGCCTAAACAAACCACTTATTTTTTTCCTTGTTAAGGAGCAATCATGTCTGCAATATATGAAGAGAAGAAGGATGAAGATGGATTTCTGTATGTTACTTACAGTGGAGAGAACACATTTGGGTGGTAGCTGGCTTGTGTGGTAGACCTGATTGTTCTTAGATTTTCACTTCATTGCTATTGTCGCGGCCGTCGTTGTAGTCATCTTCCACTGTTCTCTCTGCCTCTTCCTTTTGCTGCTCCTTGTTCTTCCAGTTCTTCAAGGATTCTGGCAAGTGATACATTCTGTACAGCTCTACATAATGAATAAAATTTGTGAAAACATTTCCACGCCAAAAAGTTATTAATTGCTTCCAATATTGCTTTTATAATTCCTTTTGCCCCAAATTTTTTATGGGGTTTTTTTCTTCTGTTTATTGTAAAGATAAAATCTCTTACAAAAAAATCGTTTTTACTCATTAAAAAGATATTCCATCTACTCTTATAATAACCTCCCTAATATTATTCTCA

Coding sequence (CDS)

ATGGCTAAGAGTTACTTCAAGCAAGAGCATGATCTTGAGAAAAGAAAAGCAGAGGCTGCAAGGATTAGGGAGAAATATCCCGATAGAATTCCTGTTATTGTGGAGAAGGCAGAGAGAAGTGACATCCCTAGCATTGATAAGAAGAAATACCTAGTTCCTGCAGACCTTACTGTGGGACAGTTCGTTTATGTCATTCGTAAAAGGATTAAATTGAGCCCGGAGAAAGCGATCTTTATCTTCGTGGACAATGTCCTCCCTCCTACAGGTACAGCCTTTTCTTCTATAACATATTGGAGGGTATGTTTAGGACCACTTGAAAATGAAAGGCCGTCCCATAAACAAGTTCATTTAACAGATTTCGGTAACGATCATATCAATAATGTTGATTATGATCTATCATAA

Protein sequence

MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSITYWRVCLGPLENERPSHKQVHLTDFGNDHINNVDYDLS*

Homology

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BLAST of Cucsa.301880.1 vs. Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.9e-41
Identity = 85/95 (89.47%), Postives = 89/95 (93.68%), Query Frame = 1


Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKS FKQEHDLEKR+AEAARIREKYPDRIPVIVEKAE+SDIP+IDKKKYLVPADLTVGQ
Sbjct: 1  MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLS EKAIFIFVDNVLPP G   SS+
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSV 95

[Close]

BLAST of Cucsa.301880.1 vs. Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.3e-37
Identity = 77/95 (81.05%), Postives = 85/95 (89.47%), Query Frame = 1


Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MA S FK EH LEKR+AEAARIREKYPDRIPVIVE+AE+SD+P ID+KKYLVPADLTVGQ
Sbjct: 1  MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYV+RKRIKLSPEKAIFIFV N+LPPT    S+I
Sbjct: 61 FVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAI 95

[Close]

BLAST of Cucsa.301880.1 vs. Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=1 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 3.8e-37
Identity = 76/92 (82.61%), Postives = 84/92 (91.30%), Query Frame = 1


Query: 4  SYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVY 63
          S FK ++D EKRKAEA RIREKYPDRIPVIVEKAE+S++P+IDKKKYLVP+DLTVGQFVY
Sbjct: 5  SIFKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVY 64

Query: 64 VIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          VIRKRIKLS EKAIFIFVDNVLPPTG   SS+
Sbjct: 65 VIRKRIKLSAEKAIFIFVDNVLPPTGELMSSV 96

[Close]

BLAST of Cucsa.301880.1 vs. Swiss-Prot
Match: ATG8G_ARATH (Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 6.5e-37
Identity = 76/95 (80.00%), Postives = 85/95 (89.47%), Query Frame = 1


Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          M+   F+Q+HD EKRKAEA RIREKY DR+PVIVEK+E+SDIP+IDKKKYLVPADLTVGQ
Sbjct: 1  MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRI+LS EKAIFIFVDNVLPPTG   S+I
Sbjct: 61 FVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTI 95

[Close]

BLAST of Cucsa.301880.1 vs. Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 8.5e-37
Identity = 78/95 (82.11%), Postives = 83/95 (87.37%), Query Frame = 1


Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKS FK +H LE+R+AEA RIREKY DRIPVIVEKAERSDIP IDKKKYLVPADLTVGQ
Sbjct: 1  MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYV+RKRIKLSPEKAIFIFV N LPPT    S+I
Sbjct: 61 FVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAI 95

[Close]

BLAST of Cucsa.301880.1 vs. TrEMBL
Match: A0A0A0KR95_CUCSA (Autophagy-related protein OS=Cucumis sativus GN=Csa_5G161950 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 9.4e-43
Identity = 91/95 (95.79%), Postives = 92/95 (96.84%), Query Frame = 1


Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLSPEKAIFIFVDNVLPPTG   S+I
Sbjct: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAI 95

[Close]

BLAST of Cucsa.301880.1 vs. TrEMBL
Match: C6SX89_SOYBN (Autophagy-related protein OS=Glycine max GN=GLYMA_17G140700 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 8.0e-42
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 1


Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1  MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLS EKAIFIFVDNVLPPTG   SSI
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSI 95

[Close]

BLAST of Cucsa.301880.1 vs. TrEMBL
Match: A0A0B2PQ48_GLYSO (Autophagy-related protein OS=Glycine soja GN=glysoja_017110 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 8.0e-42
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 1


Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1  MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLS EKAIFIFVDNVLPPTG   SSI
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSI 95

[Close]

BLAST of Cucsa.301880.1 vs. TrEMBL
Match: I1MUZ8_SOYBN (Autophagy-related protein OS=Glycine max GN=GLYMA_17G140700 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 8.0e-42
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 7   MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 66

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
           FVYVIRKRIKLS EKAIFIFVDNVLPPTG   SSI
Sbjct: 67  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSI 101

[Close]

BLAST of Cucsa.301880.1 vs. TrEMBL
Match: B9GVG5_POPTR (Autophagy-related protein OS=Populus trichocarpa GN=POPTR_0003s11030g PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-41
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 1


Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ
Sbjct: 1  MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLS EKAIFIFVDNVLPPTG   SSI
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSI 95

[Close]

BLAST of Cucsa.301880.1 vs. TAIR10
Match: AT4G16520.1 (AT4G16520.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 169.9 bits (429), Expect = 1.1e-42
Identity = 85/95 (89.47%), Postives = 89/95 (93.68%), Query Frame = 1


Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKS FKQEHDLEKR+AEAARIREKYPDRIPVIVEKAE+SDIP+IDKKKYLVPADLTVGQ
Sbjct: 1  MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLS EKAIFIFVDNVLPP G   SS+
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSV 95

[Close]

BLAST of Cucsa.301880.1 vs. TAIR10
Match: AT2G45170.1 (AT2G45170.1 AUTOPHAGY 8E)

HSP 1 Score: 155.6 bits (392), Expect = 2.1e-38
Identity = 76/92 (82.61%), Postives = 84/92 (91.30%), Query Frame = 1


Query: 4  SYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVY 63
          S FK ++D EKRKAEA RIREKYPDRIPVIVEKAE+S++P+IDKKKYLVP+DLTVGQFVY
Sbjct: 5  SIFKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVY 64

Query: 64 VIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          VIRKRIKLS EKAIFIFVDNVLPPTG   SS+
Sbjct: 65 VIRKRIKLSAEKAIFIFVDNVLPPTGELMSSV 96

[Close]

BLAST of Cucsa.301880.1 vs. TAIR10
Match: AT3G60640.1 (AT3G60640.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 154.8 bits (390), Expect = 3.7e-38
Identity = 76/95 (80.00%), Postives = 85/95 (89.47%), Query Frame = 1


Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          M+   F+Q+HD EKRKAEA RIREKY DR+PVIVEK+E+SDIP+IDKKKYLVPADLTVGQ
Sbjct: 1  MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRI+LS EKAIFIFVDNVLPPTG   S+I
Sbjct: 61 FVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTI 95

[Close]

BLAST of Cucsa.301880.1 vs. TAIR10
Match: AT1G62040.2 (AT1G62040.2 Ubiquitin-like superfamily protein)

HSP 1 Score: 150.2 bits (378), Expect = 9.0e-37
Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MA S FK EH LE+R+ E++RIREKYPDRIPVIVE+AERSD+P+IDKKKYLVPADLTVGQ
Sbjct: 15  MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 74

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
           FVYV+RKRIKLS EKAIF+FV N LPPT    S+I
Sbjct: 75  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAI 109

[Close]

BLAST of Cucsa.301880.1 vs. TAIR10
Match: AT2G05630.2 (AT2G05630.2 Ubiquitin-like superfamily protein)

HSP 1 Score: 143.7 bits (361), Expect = 8.4e-35
Identity = 69/84 (82.14%), Postives = 78/84 (92.86%), Query Frame = 1


Query: 12  LEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKL 71
           L+KR+AEAARIREKYPDRIPVIVE+AE+SD+P ID+KKYLVPADLTVGQFVYV+RKRIKL
Sbjct: 56  LKKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKL 115

Query: 72  SPEKAIFIFVDNVLPPTGTAFSSI 96
           SPEKAIFIFV N+LPPT    S+I
Sbjct: 116 SPEKAIFIFVKNILPPTAAIMSAI 139

[Close]

BLAST of Cucsa.301880.1 vs. NCBI nr
Match: gi|449469398|ref|XP_004152407.1| (PREDICTED: autophagy-related protein 8f [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-42
Identity = 91/95 (95.79%), Postives = 92/95 (96.84%), Query Frame = 1


Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLSPEKAIFIFVDNVLPPTG   S+I
Sbjct: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAI 95

[Close]

BLAST of Cucsa.301880.1 vs. NCBI nr
Match: gi|947054658|gb|KRH04111.1| (hypothetical protein GLYMA_17G140700 [Glycine max])

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-41
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 1


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 7   MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 66

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
           FVYVIRKRIKLS EKAIFIFVDNVLPPTG   SSI
Sbjct: 67  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSI 101

[Close]

BLAST of Cucsa.301880.1 vs. NCBI nr
Match: gi|351727823|ref|NP_001236662.1| (uncharacterized protein LOC100499835 [Glycine max])

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-41
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 1


Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1  MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLS EKAIFIFVDNVLPPTG   SSI
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSI 95

[Close]

BLAST of Cucsa.301880.1 vs. NCBI nr
Match: gi|357476885|ref|XP_003608728.1| (gaba-receptor-associated protein ubiquitin domain protein [Medicago truncatula])

HSP 1 Score: 176.8 bits (447), Expect = 2.5e-41
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 1


Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1  MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLS EKAIFIFVDNVLPPTG   S+I
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAI 95

[Close]

BLAST of Cucsa.301880.1 vs. NCBI nr
Match: gi|224071541|ref|XP_002303509.1| (autophagy 8g family protein [Populus trichocarpa])

HSP 1 Score: 176.8 bits (447), Expect = 2.5e-41
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 1


Query: 1  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
          MAKSYFKQEHDLEKR+AEAARIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ
Sbjct: 1  MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 61 FVYVIRKRIKLSPEKAIFIFVDNVLPPTGTAFSSI 96
          FVYVIRKRIKLS EKAIFIFVDNVLPPTG   SSI
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSI 95

The following BLAST results are available for this feature:

BLAST of Cucsa.301880.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATG8F_ARATH	1.9e-41	89.47	Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=1 SV=1	[more]
ATG8D_ARATH	1.3e-37	81.05	Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1	[more]
ATG8E_ARATH	3.8e-37	82.61	Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=1 SV=2	[more]
ATG8G_ARATH	6.5e-37	80.00	Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1	[more]
ATG8B_ORYSI	8.5e-37	82.11	Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1	[more]

BLAST of Cucsa.301880.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR95_CUCSA	9.4e-43	95.79	Autophagy-related protein OS=Cucumis sativus GN=Csa_5G161950 PE=3 SV=1	[more]
C6SX89_SOYBN	8.0e-42	94.74	Autophagy-related protein OS=Glycine max GN=GLYMA_17G140700 PE=2 SV=1	[more]
A0A0B2PQ48_GLYSO	8.0e-42	94.74	Autophagy-related protein OS=Glycine soja GN=glysoja_017110 PE=3 SV=1	[more]
I1MUZ8_SOYBN	8.0e-42	94.74	Autophagy-related protein OS=Glycine max GN=GLYMA_17G140700 PE=3 SV=1	[more]
B9GVG5_POPTR	1.8e-41	93.68	Autophagy-related protein OS=Populus trichocarpa GN=POPTR_0003s11030g PE=3 SV=1	[more]

BLAST of Cucsa.301880.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16520.1	1.1e-42	89.47	Ubiquitin-like superfamily protein	[more]
AT2G45170.1	2.1e-38	82.61	AUTOPHAGY 8E	[more]
AT3G60640.1	3.7e-38	80.00	Ubiquitin-like superfamily protein	[more]
AT1G62040.2	9.0e-37	76.84	Ubiquitin-like superfamily protein	[more]
AT2G05630.2	8.4e-35	82.14	Ubiquitin-like superfamily protein	[more]

BLAST of Cucsa.301880.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449469398\|ref\|XP_004152407.1\|	1.3e-42	95.79	PREDICTED: autophagy-related protein 8f [Cucumis sativus]	[more]
gi\|947054658\|gb\|KRH04111.1\|	1.1e-41	94.74	hypothetical protein GLYMA_17G140700 [Glycine max]	[more]
gi\|351727823\|ref\|NP_001236662.1\|	1.1e-41	94.74	uncharacterized protein LOC100499835 [Glycine max]	[more]
gi\|357476885\|ref\|XP_003608728.1\|	2.5e-41	93.68	gaba-receptor-associated protein ubiquitin domain protein [Medicago truncatula]	[more]
gi\|224071541\|ref\|XP_002303509.1\|	2.5e-41	93.68	autophagy 8g family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004241	Atg8-like

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.301880	Cucsa.301880	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.301880.1	Cucsa.301880.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.301880.1.five_prime_UTR.1	Cucsa.301880.1.five_prime_UTR.1	five_prime_UTR
Cucsa.301880.1.five_prime_UTR.2	Cucsa.301880.1.five_prime_UTR.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.301880.1.CDS.1	Cucsa.301880.1.CDS.1	CDS
Cucsa.301880.1.CDS.2	Cucsa.301880.1.CDS.2	CDS
Cucsa.301880.1.CDS.3	Cucsa.301880.1.CDS.3	CDS
Cucsa.301880.1.CDS.4	Cucsa.301880.1.CDS.4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.301880.1.three_prime_UTR.1	Cucsa.301880.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 1..95 score: 1.2
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 14..95 score: 2.9
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 3..95 score: 1.1
None	No IPR available	PANTHER	PTHR10969:SF39	AUTOPHAGY-RELATED PROTEIN 8F	coord: 1..95 score: 1.2