Cucsa.286400 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.286400
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold02653 : 2454287 .. 2454562 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGTTCTCAGAAAACTTCCGTAAGGACATGGGGTTCGAATTTGACCCCGAAAAATGGGTCATTACTGGAATTCAATTACGACCTCCTCTATTGCTCACCATTAACAAAGAACACAGTCATTGCGACAATGAAGACCAACCGCCGACGCCTACTGGAGATGAATGCCGGATCCTATCGGGTTCCAAATGCCCACCCGCCCCTAAGAAGCCTAAATCTTCGTTGAAATTCAACCACGGCAACGTGCGCCAATTCTTCAAGCCTCCCGACTTAGAG

mRNA sequence

ATGCCGTTCTCAGAAAACTTCCGTAAGGACATGGGGTTCGAATTTGACCCCGAAAAATGGGTCATTACTGGAATTCAATTACGACCTCCTCTATTGCTCACCATTAACAAAGAACACAGTCATTGCGACAATGAAGACCAACCGCCGACGCCTACTGGAGATGAATGCCGGATCCTATCGGGTTCCAAATGCCCACCCGCCCCTAAGAAGCCTAAATCTTCGTTGAAATTCAACCACGGCAACGTGCGCCAATTCTTCAAGCCTCCCGACTTAGAG

Coding sequence (CDS)

ATGCCGTTCTCAGAAAACTTCCGTAAGGACATGGGGTTCGAATTTGACCCCGAAAAATGGGTCATTACTGGAATTCAATTACGACCTCCTCTATTGCTCACCATTAACAAAGAACACAGTCATTGCGACAATGAAGACCAACCGCCGACGCCTACTGGAGATGAATGCCGGATCCTATCGGGTTCCAAATGCCCACCCGCCCCTAAGAAGCCTAAATCTTCGTTGAAATTCAACCACGGCAACGTGCGCCAATTCTTCAAGCCTCCCGACTTAGAG

Protein sequence

MPFSENFRKDMGFEFDPEKWVITGIQLRPPLLLTINKEHSHCDNEDQPPTPTGDECRILSGSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLE
Homology
[Close]
BLAST of Cucsa.286400 vs. TrEMBL
Match: A0A0A0KVI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G598740 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.2e-49
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1 

Query: 1  MPFSENFRKDMGFEFDPEKWVITGIQLRPPLLLTINKEHSHCDNEDQPPTPTGDECRILS 60
          MPFSENFRKDMGFEFDPEKWVITGIQLRPPLLLTINKEHSHCDNEDQPPTPTGDECRILS
Sbjct: 1  MPFSENFRKDMGFEFDPEKWVITGIQLRPPLLLTINKEHSHCDNEDQPPTPTGDECRILS 60

Query: 61 GSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLE 93
          GSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLE
Sbjct: 61 GSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLE 92

[Close]
BLAST of Cucsa.286400 vs. TrEMBL
Match: A0A067JRX4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17805 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 7.0e-13
Identity = 44/94 (46.81%), Postives = 56/94 (59.57%), Query Frame = 1 

Query: 1  MPFSENFRKDMGFEFDPEKWVITGIQLRPPL--LLTINKEHSHCDNEDQPPTPTGDECRI 60
          M FS   + D G E D +KWVI GI LR PL  + T   +     + D   TPT +E RI
Sbjct: 1  MGFSGKPQVDNGLELDCKKWVIAGIPLRAPLKKIYTNPVDKESESDHDCSTTPTSEESRI 60

Query: 61 LSGSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLE 93
           +   CPPAPKK K++LK N+  VR+FF PPDL+
Sbjct: 61 SARLTCPPAPKKRKATLKCNYNGVREFFTPPDLD 94

[Close]
BLAST of Cucsa.286400 vs. TrEMBL
Match: F6H7W9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0225g00120 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 5.9e-12
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 1 

Query: 3  FSENFRKDMGFEFDPEKWVITGIQLRPPL----LLTINKEHSHCDNEDQPPTPTGDECRI 62
          F+E  + D G E + +KWVI+GIQLR PL       + KE    +  ++  TPT +E RI
Sbjct: 4  FAEKLQVDGGLESENKKWVISGIQLRAPLKPVYTSPVGKERD--EEGEECSTPTYEEARI 63

Query: 63 LSGSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLE 93
           +   CPPAP+K K S + N+  VR+FF PPDLE
Sbjct: 64 PTTLTCPPAPRKRKPSSRCNYNGVREFFTPPDLE 95

[Close]
BLAST of Cucsa.286400 vs. TrEMBL
Match: B9SPK0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0024670 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 5.9e-12
Identity = 44/95 (46.32%), Postives = 55/95 (57.89%), Query Frame = 1 

Query: 1  MPFSENFRKDMGFEFDPEKWVITGIQLRPPLLLTINK---EHSHCDNEDQPPTPTGDECR 60
          M FS   + D G E D +KWVI GI LR PL     K   E     N++   TPT ++ R
Sbjct: 1  MGFSGKTQVDNGLELDSKKWVIAGIPLRAPLKPIYTKPVVEKESDQNDECSTTPTSEQAR 60

Query: 61 ILSGSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLE 93
            +   CPPAPKK K++LK N+ N R+FF PPDLE
Sbjct: 61 TPARLMCPPAPKKRKATLKCNYSN-REFFIPPDLE 94

[Close]
BLAST of Cucsa.286400 vs. TrEMBL
Match: A0A0D2RH69_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G179500 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-11
Identity = 44/92 (47.83%), Postives = 53/92 (57.61%), Query Frame = 1 

Query: 10  DMGFEFDPEKWVITGIQLRPPLLLTINK-------EHSHCDNEDQP--PTPTGDECRILS 69
           D G E + +KWVI GI LR PL             + S  D ED+    TPTG E RI +
Sbjct: 10  DAGLESEGKKWVIAGISLRAPLKPIYTHPVDDQRDKDSTDDKEDESCSTTPTGQEARIPT 69

Query: 70  GSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLE 93
              CPPAP K K +LK N+G+VR+FF PPDLE
Sbjct: 70  LLTCPPAPVKRKPTLKCNYGSVREFFTPPDLE 101

[Close]
BLAST of Cucsa.286400 vs. TAIR10
Match: AT5G40460.1 (AT5G40460.1 unknown protein)

HSP 1 Score: 67.0 bits (162), Expect = 6.9e-12
Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = 1 

Query: 1   MPFSENFRKDMGFEFDPEKWVITGIQLR------------PPLLLTINKEHSHCDNEDQP 60
           M FS+  + + G E D +KWVI GI +R            PP ++T  +E  + + E+  
Sbjct: 1   MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS 60

Query: 61  PTPTGDECRILSGSKCPPAPKKPKSSLKFNHGNVRQFFKPP-DLE 93
            TPT  E +I    +CPPAP+K + +LK     VR+FF PP DLE
Sbjct: 61  TTPTAKETKIPELLECPPAPRKRRPALKCRSNVVREFFTPPSDLE 105

[Close]
BLAST of Cucsa.286400 vs. TAIR10
Match: AT1G60783.1 (AT1G60783.1 unknown protein)

HSP 1 Score: 60.5 bits (145), Expect = 6.4e-10
Identity = 36/78 (46.15%), Postives = 47/78 (60.26%), Query Frame = 1 

Query: 18 EKWVITGIQLRP---PLLLTINKEHSHCDNEDQPPTPTGDECRILSGSKCPPAPKKPKSS 77
          +K VITGI L     P+ L+ +   +  D +  P TPT D  RI +   CPPAPKK K +
Sbjct: 22 KKCVITGISLHSTVKPISLSSSAVSNTEDEDLCPTTPTADSVRIPTVIPCPPAPKKRKLT 81

Query: 78 LKFNHGNVRQFFKPPDLE 93
          LK ++G  R+FF PPDLE
Sbjct: 82 LKVSYGP-REFFSPPDLE 98

[Close]
BLAST of Cucsa.286400 vs. NCBI nr
Match: gi|700196589|gb|KGN51766.1| (hypothetical protein Csa_5G598740 [Cucumis sativus])

HSP 1 Score: 203.4 bits (516), Expect = 1.7e-49
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1 

Query: 1  MPFSENFRKDMGFEFDPEKWVITGIQLRPPLLLTINKEHSHCDNEDQPPTPTGDECRILS 60
          MPFSENFRKDMGFEFDPEKWVITGIQLRPPLLLTINKEHSHCDNEDQPPTPTGDECRILS
Sbjct: 1  MPFSENFRKDMGFEFDPEKWVITGIQLRPPLLLTINKEHSHCDNEDQPPTPTGDECRILS 60

Query: 61 GSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLE 93
          GSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLE
Sbjct: 61 GSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLE 92

[Close]
BLAST of Cucsa.286400 vs. NCBI nr
Match: gi|659090731|ref|XP_008446170.1| (PREDICTED: uncharacterized protein LOC103488975 [Cucumis melo])

HSP 1 Score: 193.4 bits (490), Expect = 1.8e-46
Identity = 87/92 (94.57%), Postives = 89/92 (96.74%), Query Frame = 1 

Query: 1  MPFSENFRKDMGFEFDPEKWVITGIQLRPPLLLTINKEHSHCDNEDQPPTPTGDECRILS 60
          M FSENFRKDMGFEFDPEKWVITGIQLRPPLLLTINKEH+HCDNEDQPPTPTGDECRI S
Sbjct: 1  MAFSENFRKDMGFEFDPEKWVITGIQLRPPLLLTINKEHNHCDNEDQPPTPTGDECRIRS 60

Query: 61 GSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLE 93
          GSKCPPAPKKPKSSLKFNH N+RQFFKPPDLE
Sbjct: 61 GSKCPPAPKKPKSSLKFNHSNMRQFFKPPDLE 92

[Close]
BLAST of Cucsa.286400 vs. NCBI nr
Match: gi|802724853|ref|XP_012085871.1| (PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas])

HSP 1 Score: 81.3 bits (199), Expect = 1.0e-12
Identity = 44/94 (46.81%), Postives = 56/94 (59.57%), Query Frame = 1 

Query: 1  MPFSENFRKDMGFEFDPEKWVITGIQLRPPL--LLTINKEHSHCDNEDQPPTPTGDECRI 60
          M FS   + D G E D +KWVI GI LR PL  + T   +     + D   TPT +E RI
Sbjct: 1  MGFSGKPQVDNGLELDCKKWVIAGIPLRAPLKKIYTNPVDKESESDHDCSTTPTSEESRI 60

Query: 61 LSGSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLE 93
           +   CPPAPKK K++LK N+  VR+FF PPDL+
Sbjct: 61 SARLTCPPAPKKRKATLKCNYNGVREFFTPPDLD 94

[Close]
BLAST of Cucsa.286400 vs. NCBI nr
Match: gi|1000948938|ref|XP_015580091.1| (PREDICTED: uncharacterized protein LOC8273497 [Ricinus communis])

HSP 1 Score: 78.2 bits (191), Expect = 8.5e-12
Identity = 44/95 (46.32%), Postives = 55/95 (57.89%), Query Frame = 1 

Query: 1  MPFSENFRKDMGFEFDPEKWVITGIQLRPPLLLTINK---EHSHCDNEDQPPTPTGDECR 60
          M FS   + D G E D +KWVI GI LR PL     K   E     N++   TPT ++ R
Sbjct: 1  MGFSGKTQVDNGLELDSKKWVIAGIPLRAPLKPIYTKPVVEKESDQNDECSTTPTSEQAR 60

Query: 61 ILSGSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLE 93
            +   CPPAPKK K++LK N+ N R+FF PPDLE
Sbjct: 61 TPARLMCPPAPKKRKATLKCNYSN-REFFIPPDLE 94

[Close]
BLAST of Cucsa.286400 vs. NCBI nr
Match: gi|225470585|ref|XP_002273869.1| (PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Vitis vinifera])

HSP 1 Score: 78.2 bits (191), Expect = 8.5e-12
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 1 

Query: 3  FSENFRKDMGFEFDPEKWVITGIQLRPPL----LLTINKEHSHCDNEDQPPTPTGDECRI 62
          F+E  + D G E + +KWVI+GIQLR PL       + KE    +  ++  TPT +E RI
Sbjct: 4  FAEKLQVDGGLESENKKWVISGIQLRAPLKPVYTSPVGKERD--EEGEECSTPTYEEARI 63

Query: 63 LSGSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLE 93
           +   CPPAP+K K S + N+  VR+FF PPDLE
Sbjct: 64 PTTLTCPPAPRKRKPSSRCNYNGVREFFTPPDLE 95

The following BLAST results are available for this feature:
BLAST of Cucsa.286400 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVI5_CUCSA1.2e-49100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G598740 PE=4 SV=1[more]
A0A067JRX4_JATCU7.0e-1346.81Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17805 PE=4 SV=1[more]
F6H7W9_VITVI5.9e-1244.68Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0225g00120 PE=4 SV=... [more]
B9SPK0_RICCO5.9e-1246.32Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0024670 PE=4 SV=1[more]
A0A0D2RH69_GOSRA2.2e-1147.83Uncharacterized protein OS=Gossypium raimondii GN=B456_005G179500 PE=4 SV=1[more]
BLAST of Cucsa.286400 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G40460.16.9e-1238.10 unknown protein[more]
AT1G60783.16.4e-1046.15 unknown protein[more]
BLAST of Cucsa.286400 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700196589|gb|KGN51766.1|1.7e-49100.00hypothetical protein Csa_5G598740 [Cucumis sativus][more]
gi|659090731|ref|XP_008446170.1|1.8e-4694.57PREDICTED: uncharacterized protein LOC103488975 [Cucumis melo][more]
gi|802724853|ref|XP_012085871.1|1.0e-1246.81PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas][more]
gi|1000948938|ref|XP_015580091.1|8.5e-1246.32PREDICTED: uncharacterized protein LOC8273497 [Ricinus communis][more]
gi|225470585|ref|XP_002273869.1|8.5e-1244.68PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.286400.1Cucsa.286400.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33142FAMILY NOT NAMEDcoord: 3..92
score: 5.3
NoneNo IPR availablePANTHERPTHR33142:SF2SUBFAMILY NOT NAMEDcoord: 3..92
score: 5.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.286400Csa5G598740Cucumber (Chinese Long) v2cgycuB410
Cucsa.286400MELO3C011958Melon (DHL92) v3.5.1cgymeB474
Cucsa.286400CSPI05G22350Wild cucumber (PI 183967)cgycpiB432
Cucsa.286400CmaCh04G017560Cucurbita maxima (Rimu)cgycmaB0802
Cucsa.286400CmoCh04G018470Cucurbita moschata (Rifu)cgycmoB0794
Cucsa.286400Lsi04G005830Bottle gourd (USVL1VR-Ls)cgylsiB465
Cucsa.286400MELO3C011958.2Melon (DHL92) v3.6.1cgymedB471
Cucsa.286400CsaV3_5G031210Cucumber (Chinese Long) v3cgycucB441
Cucsa.286400Cla97C05G107880Watermelon (97103) v2cgywmbB498
Cucsa.286400Bhi07G001423Wax gourdcgywgoB581
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.286400Cucumber (Chinese Long) v3cgycucB433
Cucsa.286400Cucumber (Chinese Long) v3cgycucB437
Cucsa.286400Watermelon (97103) v2cgywmbB501
Cucsa.286400Wax gourdcgywgoB576
Cucsa.286400Wax gourdcgywgoB578
Cucsa.286400Cucumber (Gy14) v1cgycgyB039
Cucsa.286400Cucumber (Gy14) v1cgycgyB139
Cucsa.286400Cucurbita maxima (Rimu)cgycmaB0808
Cucsa.286400Cucurbita maxima (Rimu)cgycmaB0791
Cucsa.286400Cucurbita maxima (Rimu)cgycmaB0798
Cucsa.286400Cucurbita maxima (Rimu)cgycmaB0799
Cucsa.286400Cucurbita moschata (Rifu)cgycmoB0786
Cucsa.286400Cucurbita moschata (Rifu)cgycmoB0790
Cucsa.286400Cucurbita moschata (Rifu)cgycmoB0801
Cucsa.286400Wild cucumber (PI 183967)cgycpiB425
Cucsa.286400Wild cucumber (PI 183967)cgycpiB429
Cucsa.286400Cucumber (Chinese Long) v2cgycuB407
Cucsa.286400Melon (DHL92) v3.5.1cgymeB477
Cucsa.286400Melon (DHL92) v3.5.1cgymeB479
Cucsa.286400Watermelon (Charleston Gray)cgywcgB498
Cucsa.286400Watermelon (Charleston Gray)cgywcgB493
Cucsa.286400Watermelon (Charleston Gray)cgywcgB501
Cucsa.286400Watermelon (97103) v1cgywmB524
Cucsa.286400Cucurbita pepo (Zucchini)cgycpeB0746
Cucsa.286400Cucurbita pepo (Zucchini)cgycpeB0744
Cucsa.286400Cucurbita pepo (Zucchini)cgycpeB0751
Cucsa.286400Cucurbita pepo (Zucchini)cgycpeB0764
Cucsa.286400Bottle gourd (USVL1VR-Ls)cgylsiB459
Cucsa.286400Bottle gourd (USVL1VR-Ls)cgylsiB468
Cucsa.286400Melon (DHL92) v3.6.1cgymedB474
Cucsa.286400Melon (DHL92) v3.6.1cgymedB477
Cucsa.286400Silver-seed gourdcarcgyB0288
Cucsa.286400Silver-seed gourdcarcgyB0575
Cucsa.286400Silver-seed gourdcarcgyB0698
Cucsa.286400Silver-seed gourdcarcgyB0815