Cucsa.281620 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAGAGAGAGAAAGGAAGAAGCAGAGAGACATAAAGGGAGAGAGAAAGAGAAGACAGAGAGAGTTCTTGAGAGAGAGAGAGAGAGAGAAGGACCGTTAATTTCCGTTAATATATGAAGCAATTTTGAGAGCTACAAGAAGCTAAAATGGTTACAGACCAAGAGCTTTCTCAAGCTATACAATGTCTTCTTCGCGACTCTGCTTCTCCTACAAACCCTAACCCTTTTTCTTCTTTAAACGCTGTTGTTCAGGAGTTGCAGACCAAGCTTGGTCTTGACCTCTCTCATAAACTCGATTTCATCCATGCCCAGATCCAATTTATCCTTCGTTCTCATCCTCAACAACCCCATCATCACCAACATCACCACCACCACCACCATCAGCAGCAGCAGCAACAACAACTACCCTCTTCGCAGAAAGACCTCTTTGCCCTTCATCAAAGCCCTAATTTTCAATCTGCGCCTTCCCCCACTTCCTCTGCGTTTCACACTTTCTCTGCTCAGCCTCCGCCGGCTAAGCCGGATTCCGTCGTTGCTCCCACTGTTCCGGGCTCTGACCCGCCAAAGGAAAGGTGGGGTTCTTTTGGTTTTTTCAATTTTGGGGTTTTGGGTTTCTTTTATTTTTTTTAGTTGCCCTCTTTGATTTACTTATTGTTCGTCTTGGGTGTGTATGTTTGTGTAAATCTGTTTCAATTCTGGAGTGAAGTTGATTTCGTTCTGTTTTGATTGCAATTCTACAGAATTAGTGGAATGGCTTCTCGATTTCTTTGCTTATTCCTTTTCCTTTTTGCAACGGTTACTTCATTCGTTCAGAATTAGGTCGGAAAAGGCAGTGAAGTTGTTCGTTTACTTGCTGTGGACTTTGTTTGGAGGATTTTGGAGTGTAGAGTTCACTGATTAGTGGCATTTGGGTTGGTCTTAGTTTTACTCGAGGGTTTATTGTTAATTTTCCCTTGAGTGTTGACTAGGTTCTGCTTCGTTTTCCTCTGGGTTGAGAAGTTTATTCAGGATTTCTGGTCAGAAATGTGACTTTCTGCTTTTGTCGTGGCTGTTGGAAAAGTAAATTTTCTCTTAATGATGCCTTGTCAAATGTGTGTGCATAGGTATCTACTACGAGCATGCTGAGTTTTCATTTATTTTCTGGTTGTTTCCTTTAATTCGTATTATTTTTGCATTCTTGGTTCTAGTCTGGTCAGCACAGCCAGATACCATATGCGGAAAAAAAAATCTTGGGAATTTGTAACTTTGGATTTGTCCATCAGCATGGTAGTGGATTGGTAGGGAGTTAATAAAATGAGAGATGGAAGCTACCCTAGTTTACTGGAAATGGATATTAATGTATGGCATCTACATGTGAGGAGTCTTTATCGTATGCATACATTTTTCTATAAATATCACTGTAGCTTTGACCTCTCAGCACACTTTTGAAAGTGAACGGCTAGCTCCTTCCCAGTCTGGGCTTACTTTTATTTTGCAATCTAGTAATGTATGTAGCTTCGAGCTTGTAATCTCATGATTTCAATGGCCTTACTAGTGATACCTTTTTAAGTATCGATTACCAGCTGGTAGCCATAAGTATGGAACACTTTGTTGTGTACTATAGAGCTACGAAGTAGAATCTTTCAATTAGTTTTCATTCCATGGAAGGGTGAAATGTTTCATTTACTGTTTTATTCAAAGATTAAAATAATACACGTCTCTCTAGTTCTTAGATCCCAAAGATATATGTTTCGACTGATAAAAGCTCACCTTTAAAACTTGAAAGCAGTACCCAAACCAAAACTAAGAGAAGAGGAGGCCCCGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGCCAGCCAGAATTACCGCGAACTGAGGTTTCTATCTCTTTCTTATTTCGTAGTTGTTTGATTCTCAATTTTAGCACTTTATGAGGTTCATATGATGCATCTGTGTTTGTTTCAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATATGCAATGATGAGCTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTGGCCAAACACATCATTCCTCTTGAACCTACAAGTAAGTATTCAGTTTGATGCTTCCCTGTCCCCCTAGTTCTGGAAGAAACCAATAGTTTATTTTCTAATCCTGTCAGAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCCGCAGTTAGTGTTAAAAGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCACTAGCAAATTTTTTTGGCGTTGATGGTAGGGAGATGCTCCAATCAGAAGTTCTGAGACGCATCTGGGAATACATAAAAGTGAATCATCTTGAGGTTGGCAAATAAACTCTGGAAACTTTCACTTTGTTGCATGCTAGCCATTCACTATTAATACCATCTTTTCAACTTGAGAGATCATTTCTTTGTAAAAATTATGCATACAGGACCCTCTGTAATGGATCTTAAAACATGGGGCATTGTTCTCATATGTCAGATTAACTGTTTTTTCTTCATTAAAATGATCTTGTACTCACATGTCTTGGATCTTAAAAACAGGACCCTCTGAACCCGATGGCGGTGTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCGTGATAGCTATTCTTCTAGGATGGTTAGTGCATTCTAACTTTCTTATATGTTAAAACTGATGTTAGAGTTGAAGGGTAATTTTGAGTTTCCCCATTGTTGCAATTTGACCTCCTTGCCGGCTTCATCATCATGCACGTTTTCCAAAAACATATTATTTGATTGATTGAAATTTCTTCTAGTGTTGGAGGCTGCTGATTGATAACCTGTTATCACTTGTCCTAGTTGGAAATTTATGATGCAGTATGCAGGATAGTTATAAGAAAATTATTGATATCTTCTTAGGATTAAATATATGAGAGTTTTGGGGATTTTGTCTTAGTTTTATGATGGGTCTGTGGGAACCTTCAATTGGATTCTGTTCTTGTACCATTTGCTGGGATTGATGGCAGGATAAAGAAAAAATGAAAGGAAAAACTGTCGAATTGATTATTACCTCATTTAAATTCACCCAGGACTCTGAAGTTGAAACAAACACAAGCCCTGAAATGGAAAATGTTTACTTGAAACTGATTATTTTGTTTTTGTGCCATATGGAAAGGATAAAAAACCTAAGGTAATAAACTAGGACTTGGAAATTCAGTTAGAAATAGAAAGTCAAGTCAAAGATTAGTGATTTGGAGGTCTCTTATTTATTTTGGTCTCCACAAATCAAATCTGAAAATTTAGTATATGGAATGTATTCTTGTACAAAGTTTTCTTTTTGAGTTCATAGATGCCTTATTTGATTATCTGTAAATGAAGACACAATGATTTGAAGCTTTATTTTGTGCAATCATAGCTTTTCACCCTTGAGGCCCCGTTTAATAATAATTTGGTCCTTCAAAATTAAGTTTATGAATTAAGCTTTTAAATGTTATTCCCACCAATGAGTTCCATTATTTTGTTATATACTTCTCCAAATATTTTCAAATCCAAGCCAAATTTTACAAAACTTGATTTTGTTTTTAGAATTTGATCTTTAGAATCTAATTATTTGTTTAAGAGAGATAAAGTCCAATTTTCAAAATCCAAAAACTAAAACTAAAATTATAATCAAATGGGCCCTTGGTTATTTGAATTTCAATTGACGGTTGTTTTCTTTTTTTCCTTTTCTTCAAAACAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAACCGAAGGGATTACCTTCTTTCTGACCGCTTTTTCCAGCAGTGCCAGCTGTGCTCCATACTTGCTTTACCTTTGGTTGAAGAATTTGTTTCATTTTCTTTTTCTTTTTCAAAAGCATCAAAGAATGGAATAGCCAGGACAAAACTAATGAGTGCTGATCCTTGATTGCAGTTGCAGATCGAATGGTGTTAGCGACTTACATATTGGGACAGTGTTTGGAAAAGTCTATATGGTTTTTTCTCCCCCTTCTCTTAATGTTGTAATCAGTGATGATAATATTTTACTTTTGGATCTTATGCTAAGGTAAGGTGTGAACTTGGGGATGTAAGAATGGGGGCTTATGGCAGAGTTTATTTTGTAATTGTCTGCCAAGTCCTTGGGTTTTCATTTGTCTGACTTGGTGTTTAGGTTTAGAGTAACCCCTGGGAGTTTCTAACATCCATCATACACTACAGATGATGATGGGTAAAGTAAAATTATGTTATCTACTCACTAGTTTGTT gaaagagagagaaaggaagaagcagagagacataaagggagagagaaagagaagacagagagagttcttgagagagagagagagagagaAGGACCGTTAATTTCCGTTAATATATGAAGCAATTTTGAGAGCTACAAGAAGCTAAAATGGTTACAGACCAAGAGCTTTCTCAAGCTATACAATGTCTTCTTCGCGACTCTGCTTCTCCTACAAACCCTAACCCTTTTTCTTCTTTAAACGCTGTTGTTCAGGAGTTGCAGACCAAGCTTGGTCTTGACCTCTCTCATAAACTCGATTTCATCCATGCCCAGATCCAATTTATCCTTCGTTCTCATCCTCAACAACCccatcatcaccaacatcaccaccaccaccaccatcaGCAGCAGCAGCAACAACAACTACCCTCTTCGCAGAAAGACCTCTTTGCCCTTCATCAAAGCCCTAATTTTCAATCTGCGCCTTCCCCCACTTCCTCTGCGTTTCACACTTTCTCTGCTCAGCCTCCGCCGGCTAAGCCGGATTCCGTCGTTGCTCCCACTGTTCCGGGCTCTGACCCGCCAAAGGAAAGTACCCAAACCAAAACTAAGAGAAGAGGAGGCCCCGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGCCAGCCAGAATTACCGCGAACTGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATATGCAATGATGAGCTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTGGCCAAACACATCATTCCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCCGCAGTTAGTGTTAAAAGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCACTAGCAAATTTTTTTGGCGTTGATGGTAGGGAGATGCTCCAATCAGAAGTTCTGAGACGCATCTGGGAATACATAAAAGTGAATCATCTTGAGGACCCTCTGAACCCGATGGCGGTGTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCGTGATAGCTATTCTTCTAGGATGTTGCAGATCGAATGGTGTTAGCGACTTACATATTGGGACAGTGTTTGGAAAAGTCTATATGGTTTTTTCTCCCCCTTCTCTTAATGTTGTAATCAGTGATGATAATATTTTACTTTTGGATCTTATGCTAAGGTAAGGTGTGAACTTGGGGATGTAAGAATGGGGGCTTATGGCAGAGTTTATTTTGTAATTGTCTGCCAAGTCCTTGGGTTTTCATTTGTCTGACTTGGTGTTTAGGTTTAGAGTAACCCCTGGGAGTTTCTAACATCCATCATACACTACAGATGATGATGGGTAAAGTAAAATTATGTTATCTACTCACTAGTTTGTT ATGGTTACAGACCAAGAGCTTTCTCAAGCTATACAATGTCTTCTTCGCGACTCTGCTTCTCCTACAAACCCTAACCCTTTTTCTTCTTTAAACGCTGTTGTTCAGGAGTTGCAGACCAAGCTTGGTCTTGACCTCTCTCATAAACTCGATTTCATCCATGCCCAGATCCAATTTATCCTTCGTTCTCATCCTCAACAACCCCATCATCACCAACATCACCACCACCACCACCATCAGCAGCAGCAGCAACAACAACTACCCTCTTCGCAGAAAGACCTCTTTGCCCTTCATCAAAGCCCTAATTTTCAATCTGCGCCTTCCCCCACTTCCTCTGCGTTTCACACTTTCTCTGCTCAGCCTCCGCCGGCTAAGCCGGATTCCGTCGTTGCTCCCACTGTTCCGGGCTCTGACCCGCCAAAGGAAAGTACCCAAACCAAAACTAAGAGAAGAGGAGGCCCCGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGCCAGCCAGAATTACCGCGAACTGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATATGCAATGATGAGCTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTGGCCAAACACATCATTCCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCCGCAGTTAGTGTTAAAAGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCACTAGCAAATTTTTTTGGCGTTGATGGTAGGGAGATGCTCCAATCAGAAGTTCTGAGACGCATCTGGGAATACATAAAAGTGAATCATCTTGAGGACCCTCTGAACCCGATGGCGGTGTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCGTGA MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFILRSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQPPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS*
BLAST of Cucsa.281620 vs. Swiss-Prot
Match: UAF30_SCHPO (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spp27 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.8e-14 Identity = 53/163 (32.52%), Postives = 88/163 (53.99%), Query Frame = 1
HSP 2 Score: 50.1 bits (118), Expect = 5.8e-05 Identity = 27/96 (28.12%), Postives = 55/96 (57.29%), Query Frame = 1
BLAST of Cucsa.281620 vs. Swiss-Prot
Match: TRI1_YEAST (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRI1 PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.2e-13 Identity = 43/121 (35.54%), Postives = 72/121 (59.50%), Query Frame = 1
HSP 2 Score: 49.7 bits (117), Expect = 7.5e-05 Identity = 29/102 (28.43%), Postives = 60/102 (58.82%), Query Frame = 1
BLAST of Cucsa.281620 vs. Swiss-Prot
Match: UAF30_YEAST (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UAF30 PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 7.5e-13 Identity = 36/78 (46.15%), Postives = 60/78 (76.92%), Query Frame = 1
BLAST of Cucsa.281620 vs. Swiss-Prot
Match: MEOX2_HUMAN (Homeobox protein MOX-2 OS=Homo sapiens GN=MEOX2 PE=1 SV=2) HSP 1 Score: 57.0 bits (136), Expect = 4.7e-07 Identity = 31/82 (37.80%), Postives = 37/82 (45.12%), Query Frame = 1
BLAST of Cucsa.281620 vs. Swiss-Prot
Match: MEOX2_RAT (Homeobox protein MOX-2 OS=Rattus norvegicus GN=Meox2 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 6.2e-07 Identity = 30/77 (38.96%), Postives = 36/77 (46.75%), Query Frame = 1
BLAST of Cucsa.281620 vs. TrEMBL
Match: A0A0A0LEG4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G758990 PE=4 SV=1) HSP 1 Score: 693.0 bits (1787), Expect = 1.9e-196 Identity = 342/343 (99.71%), Postives = 342/343 (99.71%), Query Frame = 1
BLAST of Cucsa.281620 vs. TrEMBL
Match: M5WHH4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008138mg PE=4 SV=1) HSP 1 Score: 439.5 bits (1129), Expect = 3.8e-120 Identity = 236/353 (66.86%), Postives = 268/353 (75.92%), Query Frame = 1
BLAST of Cucsa.281620 vs. TrEMBL
Match: G7J046_MEDTR (SWIB/MDM2 domain protein OS=Medicago truncatula GN=MTR_3g055330 PE=4 SV=2) HSP 1 Score: 419.9 bits (1078), Expect = 3.1e-114 Identity = 232/355 (65.35%), Postives = 263/355 (74.08%), Query Frame = 1
BLAST of Cucsa.281620 vs. TrEMBL
Match: I1KYE8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G324000 PE=4 SV=1) HSP 1 Score: 414.5 bits (1064), Expect = 1.3e-112 Identity = 229/355 (64.51%), Postives = 260/355 (73.24%), Query Frame = 1
BLAST of Cucsa.281620 vs. TrEMBL
Match: A0A0B2NQZ2_GLYSO (Upstream activation factor subunit spp27 OS=Glycine soja GN=glysoja_006348 PE=4 SV=1) HSP 1 Score: 414.5 bits (1064), Expect = 1.3e-112 Identity = 229/355 (64.51%), Postives = 260/355 (73.24%), Query Frame = 1
BLAST of Cucsa.281620 vs. TAIR10
Match: AT4G22360.1 (AT4G22360.1 SWIB complex BAF60b domain-containing protein) HSP 1 Score: 315.1 bits (806), Expect = 5.4e-86 Identity = 190/398 (47.74%), Postives = 247/398 (62.06%), Query Frame = 1
BLAST of Cucsa.281620 vs. TAIR10
Match: AT3G19080.1 (AT3G19080.1 SWIB complex BAF60b domain-containing protein) HSP 1 Score: 159.1 bits (401), Expect = 5.0e-39 Identity = 85/212 (40.09%), Postives = 126/212 (59.43%), Query Frame = 1
HSP 2 Score: 98.6 bits (244), Expect = 8.0e-21 Identity = 48/100 (48.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of Cucsa.281620 vs. TAIR10
Match: AT1G49520.1 (AT1G49520.1 SWIB complex BAF60b domain-containing protein) HSP 1 Score: 113.6 bits (283), Expect = 2.4e-25 Identity = 53/95 (55.79%), Postives = 71/95 (74.74%), Query Frame = 1
HSP 2 Score: 100.1 bits (248), Expect = 2.7e-21 Identity = 44/85 (51.76%), Postives = 65/85 (76.47%), Query Frame = 1
HSP 3 Score: 53.1 bits (126), Expect = 3.8e-07 Identity = 25/70 (35.71%), Postives = 43/70 (61.43%), Query Frame = 1
BLAST of Cucsa.281620 vs. TAIR10
Match: AT2G14880.1 (AT2G14880.1 SWIB/MDM2 domain superfamily protein) HSP 1 Score: 82.4 bits (202), Expect = 5.9e-16 Identity = 53/140 (37.86%), Postives = 82/140 (58.57%), Query Frame = 1
HSP 2 Score: 52.4 bits (124), Expect = 6.6e-07 Identity = 23/59 (38.98%), Postives = 40/59 (67.80%), Query Frame = 1
BLAST of Cucsa.281620 vs. TAIR10
Match: AT4G34290.1 (AT4G34290.1 SWIB/MDM2 domain superfamily protein) HSP 1 Score: 79.7 bits (195), Expect = 3.8e-15 Identity = 41/107 (38.32%), Postives = 68/107 (63.55%), Query Frame = 1
HSP 2 Score: 61.2 bits (147), Expect = 1.4e-09 Identity = 40/133 (30.08%), Postives = 71/133 (53.38%), Query Frame = 1
BLAST of Cucsa.281620 vs. NCBI nr
Match: gi|449465075|ref|XP_004150254.1| (PREDICTED: angiomotin [Cucumis sativus]) HSP 1 Score: 693.0 bits (1787), Expect = 2.7e-196 Identity = 342/343 (99.71%), Postives = 342/343 (99.71%), Query Frame = 1
BLAST of Cucsa.281620 vs. NCBI nr
Match: gi|659093750|ref|XP_008447697.1| (PREDICTED: uncharacterized protein LOC103490111 [Cucumis melo]) HSP 1 Score: 681.0 bits (1756), Expect = 1.1e-192 Identity = 339/344 (98.55%), Postives = 340/344 (98.84%), Query Frame = 1
BLAST of Cucsa.281620 vs. NCBI nr
Match: gi|1009165816|ref|XP_015901247.1| (PREDICTED: uncharacterized protein LOC107434308 [Ziziphus jujuba]) HSP 1 Score: 478.8 bits (1231), Expect = 8.0e-132 Identity = 247/342 (72.22%), Postives = 277/342 (80.99%), Query Frame = 1
BLAST of Cucsa.281620 vs. NCBI nr
Match: gi|645241394|ref|XP_008227057.1| (PREDICTED: upstream activation factor subunit spp27-like [Prunus mume]) HSP 1 Score: 440.3 bits (1131), Expect = 3.2e-120 Identity = 237/355 (66.76%), Postives = 269/355 (75.77%), Query Frame = 1
BLAST of Cucsa.281620 vs. NCBI nr
Match: gi|595863140|ref|XP_007211527.1| (hypothetical protein PRUPE_ppa008138mg [Prunus persica]) HSP 1 Score: 439.5 bits (1129), Expect = 5.4e-120 Identity = 236/353 (66.86%), Postives = 268/353 (75.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |