CsaV3_7G018820 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G018820
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Upstream activation factor subunit spp27
Location	chr7 : 8802671 .. 8805281 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTACAGACCAAGAGCTTTCTCAAGCTATACAATGTCTTCTTCGCGACTCTGCTTCTCCTACAAACCCTAACCCTTTTTCTTCTTTAAACGCTGTTGTTCAGGAGTTGCAGACCAAGCTTGGTCTTGACCTCTCTCATAAACTCGATTTCATCCATGCCCAGATCCAATTTATCCTTCGTTCTCATCCTCAACAACCCCATCATCACCAACATCACCACCACCACCACCATCAGCAGCAGCAGCAACAACAACTACCCTCTTCGCAGAAAGACCTCTTTGCCCTTCATCAAAGCCCTAATTTTCAATCTGCGCCTTCCCCCACTTCCTCTGCGTTTCACACTTTCTCTGCTCAGCCTCCGCCGGCTAAGCCGGATTCCGTCGTTGCTCCCACTGTTCCGGGCTCTGACCCGCCAAAGGAAAGGTGGGGTTCTTTTGGTTTTTTCAATTTTGGGGTTTTGGGTTTCTTTTATTTTTTTTAGTTGCCCTCTTTGATTTACTTATTGTTCGTCTTGGGTGTGTATGTTTGTGTAAATCTGTTTCAATTCTGGAGTGAAGTTGATTTCGTTCTGTTTTGATTGCAATTCTACAGAATTAGTGGAATGGCTTCTCGATTTCTTTGCTTATTCCTTTTCCTTTTTGCAACGGTTACTTCATTCGTTCAGAATTAGGTCGGAAAAGGCAGTGAAGTTGTTCGTTTACTTGCTGTGGACTTTGTTTGGAGGATTTTGGAGTGTAGAGTTCACTGATTAGTGGCATTTGGGTTGGTCTTAGTTTTACTCGAGGGTTTATTGTTAATTTTCCCTTGAGTGTTGACTAGGTTCTGCTTCGTTTTCCTCTGGGTTGAGAAGTTTATTCAGGATTTCTGGTCAGAAATGTGACTTTCTGCTTTTGTCGTGGCTGTTGGAAAAGTAAATTTTCTCTTAATGATGCCTTGTCAAATGTGTGTGCATAGGTATCTACTACGAGCATGCTGAGTTTTCATTTATTTTCTGGTTGTTTCCTTTAATTCGTATTATTTTTGCATTCTTGGTTCTAGTCTGGTCAGCACAGCCAGATACCATATGCGGAAAAAAAAATCTTGGGAATTTGTAACTTTGGATTTGTCCATCAGCATGGTAGTGGATTGGTAGGGAGTTAATAAAATGAGAGATGGAAGCTACCCTAGTTTACTGGAAATGGATATTAATGTATGGCATCTACATGTGAGGAGTCTTTATCGTATGCATACATTTTTCTATAAATATCACTGTAGCTTTGACCTCTCAGCACACTTTTGAAAGTGAACGGCTAGCTCCTTCCCAGTCTGGGCTTACTTTTATTTTGCAATCTAGTAATGTATGTAGCTTCGAGCTTGTAATCTCATGATTTCAATGGCCTTACTAGTGATACCTTTTTAAGTATCGATTACCAGCTGGTAGCCATAAGTATGGAACACTTTGTTGTGTACTATAGAGCTACGAAGTAGAATCTTTCAATTAGTTTTCATTCCATGGAAGGGTGAAATGTTTCATTTACTGTTTTATTCAAAGATTAAAATAATACACGTCTCTCTAGTTCTTAGATCCCAAAGATATATGTTTCGACTGATAAAAGCTCACCTTTAAAACTTGAAAGCAGTACCCAAACCAAAACTAAGAGAAGAGGAGGCCCCGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGCCAGCCAGAATTACCGCGAACTGAGGTTTCTATCTCTTTCTTATTTCGTAGTTGTTTGATTCTCAATTTTAGCACTTTATGAGGTTCATATGATGCATCTGTGTTTGTTTCAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATATGCAATGATGAGCTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTGGCCAAACACATCATTCCTCTTGAACCTACAAGTAAGTATTCAGTTTGATGCTTCCCTGTCCCCCTAGTTCTGGAAGAAACCAATAGTTTATTTTCTAATCCTGTCAGAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCCGCAGTTAGTGTTAAAAGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCACTAGCAAATTTTTTTGGCGTTGATGGTAGGGAGATGCTCCAATCAGAAGTTCTGAGACGCATCTGGGAATACATAAAAGTGAATCATCTTGAGGTTGGCAAATAAACTCTGGAAACTTTCACTTTGTTGCATGCTAGCCATTCACTATTAATACCATCTTTTCAACTTGAGAGATCATTTCTTTGTAAAAATTATGCATACAGGACCCTCTGTAATGGATCTTAAAACATGGGGCATTGTTCTCATATGTCAGATTAACTGTTTTTTCTTCATTAAAATGATCTTGTACTCACATGTCTTGGATCTTAAAAACAGGACCCTCTGAACCCGATGGCGGTGTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCGTGA

mRNA sequence

ATGGTTACAGACCAAGAGCTTTCTCAAGCTATACAATGTCTTCTTCGCGACTCTGCTTCTCCTACAAACCCTAACCCTTTTTCTTCTTTAAACGCTGTTGTTCAGGAGTTGCAGACCAAGCTTGGTCTTGACCTCTCTCATAAACTCGATTTCATCCATGCCCAGATCCAATTTATCCTTCGTTCTCATCCTCAACAACCCCATCATCACCAACATCACCACCACCACCACCATCAGCAGCAGCAGCAACAACAACTACCCTCTTCGCAGAAAGACCTCTTTGCCCTTCATCAAAGCCCTAATTTTCAATCTGCGCCTTCCCCCACTTCCTCTGCGTTTCACACTTTCTCTGCTCAGCCTCCGCCGGCTAAGCCGGATTCCGTCGTTGCTCCCACTGTTCCGGGCTCTGACCCGCCAAAGGAAAGTACCCAAACCAAAACTAAGAGAAGAGGAGGCCCCGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGCCAGCCAGAATTACCGCGAACTGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATATGCAATGATGAGCTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTGGCCAAACACATCATTCCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCCGCAGTTAGTGTTAAAAGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCACTAGCAAATTTTTTTGGCGTTGATGGTAGGGAGATGCTCCAATCAGAAGTTCTGAGACGCATCTGGGAATACATAAAAGTGAATCATCTTGAGGACCCTCTGAACCCGATGGCGGTGTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCGTGA

Coding sequence (CDS)

ATGGTTACAGACCAAGAGCTTTCTCAAGCTATACAATGTCTTCTTCGCGACTCTGCTTCTCCTACAAACCCTAACCCTTTTTCTTCTTTAAACGCTGTTGTTCAGGAGTTGCAGACCAAGCTTGGTCTTGACCTCTCTCATAAACTCGATTTCATCCATGCCCAGATCCAATTTATCCTTCGTTCTCATCCTCAACAACCCCATCATCACCAACATCACCACCACCACCACCATCAGCAGCAGCAGCAACAACAACTACCCTCTTCGCAGAAAGACCTCTTTGCCCTTCATCAAAGCCCTAATTTTCAATCTGCGCCTTCCCCCACTTCCTCTGCGTTTCACACTTTCTCTGCTCAGCCTCCGCCGGCTAAGCCGGATTCCGTCGTTGCTCCCACTGTTCCGGGCTCTGACCCGCCAAAGGAAAGTACCCAAACCAAAACTAAGAGAAGAGGAGGCCCCGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGCCAGCCAGAATTACCGCGAACTGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATATGCAATGATGAGCTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTGGCCAAACACATCATTCCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCCGCAGTTAGTGTTAAAAGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCACTAGCAAATTTTTTTGGCGTTGATGGTAGGGAGATGCTCCAATCAGAAGTTCTGAGACGCATCTGGGAATACATAAAAGTGAATCATCTTGAGGACCCTCTGAACCCGATGGCGGTGTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCGTGA

Protein sequence

MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFILRSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQPPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS

Homology

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BLAST of CsaV3_7G018820 vs. NCBI nr
Match: XP_004150254.1 (PREDICTED: angiomotin [Cucumis sativus] >KGN59077.1 hypothetical protein Csa_3G758990 [Cucumis sativus])

HSP 1 Score: 622.5 bits (1604), Expect = 8.7e-175
Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120
           RSHPQXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP
Sbjct: 61  RSHPQXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120

Query: 121 PPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI 180
           PPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI
Sbjct: 121 PPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI 180

Query: 181 VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS 240
           VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS
Sbjct: 181 VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS 240

Query: 241 SKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHL 300
           SKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHL
Sbjct: 241 SKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHL 300

Query: 301 EDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343
           EDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 EDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342

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BLAST of CsaV3_7G018820 vs. NCBI nr
Match: XP_008447697.1 (PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >XP_008447700.1 PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo])

HSP 1 Score: 610.5 bits (1573), Expect = 3.4e-171
Identity = 339/343 (98.83%), Postives = 340/343 (99.13%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQ-XXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFSAQ 120
           RSHPQ XXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTF+AQ
Sbjct: 61  RSHPQXXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120

Query: 121 PPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180
           PP AK DSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE
Sbjct: 121 PPTAKADSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300
           SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH
Sbjct: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300

Query: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343
           LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

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BLAST of CsaV3_7G018820 vs. NCBI nr
Match: XP_022981538.1 (uncharacterized protein LOC111480626 [Cucurbita maxima])

HSP 1 Score: 553.5 bits (1425), Expect = 5.0e-154
Identity = 296/343 (86.30%), Postives = 313/343 (91.25%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MV++QELS+A+QCLLRDSASP+NPNPFSSLNAVV ELQ+KLGLDLSHK+DFIHAQIQ IL
Sbjct: 1   MVSEQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60

Query: 61  RSHPQXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120
           RSHPQ           XXXXXXXXXXXXX       HQSPNF SAPSPTSSAFHTF+AQP
Sbjct: 61  RSHPQ-----QPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQP 120

Query: 121 PPAKPDSVVAP-TVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180
           PPAKP++  AP T  GSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQ IVGQPELPRTE
Sbjct: 121 PPAKPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPS 240

Query: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300
           SSKKARVENE A++VK+AEPS+CPSVIISEALA+FFGVDGREMLQSEVLRRIWEYI+ NH
Sbjct: 241 SSKKARVENEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANH 300

Query: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343
           LEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

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BLAST of CsaV3_7G018820 vs. NCBI nr
Match: XP_022941247.1 (uncharacterized protein LOC111446611 [Cucurbita moschata])

HSP 1 Score: 553.1 bits (1424), Expect = 6.5e-154
Identity = 296/343 (86.30%), Postives = 313/343 (91.25%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MV+DQELS+A+QCLLRDSASP+NPNPFSSLNAVV ELQ+KLGLDLSHK+DFIHAQIQ IL
Sbjct: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60

Query: 61  RSHPQXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120
           RSHPQ           XXXXXXXXXXXXX       HQSPNF SAPSPTSSAFHTF+AQP
Sbjct: 61  RSHPQ-----QPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQP 120

Query: 121 PPAKPDSVVAP-TVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180
           PPAKP++  AP T  GSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQ IVGQPELPRTE
Sbjct: 121 PPAKPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPS 240

Query: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300
           SSKKARVE+E A++VK+AEPS+CPSVIISEALA+FFGVDGREMLQSEVLRRIWEYI+ NH
Sbjct: 241 SSKKARVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANH 300

Query: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343
           LEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

[Close]

BLAST of CsaV3_7G018820 vs. NCBI nr
Match: XP_023525496.1 (uncharacterized protein LOC111789084 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 552.7 bits (1423), Expect = 8.5e-154
Identity = 295/343 (86.01%), Postives = 313/343 (91.25%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MV+DQELS+A+QCLLRDSASP+NPNPFSSLNAVV ELQ+KLGLDLSHK+DFIHAQIQ IL
Sbjct: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60

Query: 61  RSHPQXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120
           RSHPQ           XXXXXXXXXXXXX       HQSPNF SAPSPTSSAFHTF+AQP
Sbjct: 61  RSHPQ-----QPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQP 120

Query: 121 PPAKPDSVVAP-TVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180
           PPAKP++  AP T  GSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQ IVGQPELPRTE
Sbjct: 121 PPAKPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPS 240

Query: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300
           SSKKARVE+E A++VK+AEPS+CPSV+ISEALA+FFGVDGREMLQSEVLRRIWEYI+ NH
Sbjct: 241 SSKKARVESEPAIAVKAAEPSVCPSVVISEALASFFGVDGREMLQSEVLRRIWEYIRANH 300

Query: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343
           LEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

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BLAST of CsaV3_7G018820 vs. TAIR10
Match: AT4G22360.1 (SWIB complex BAF60b domain-containing protein)

HSP 1 Score: 295.0 bits (754), Expect = 5.8e-80
Identity = 195/393 (49.62%), Postives = 251/393 (63.87%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MV+DQ+L++ ++ LLR S    +P+  +SL+++VQ+L+ KLGLDL+ K  FI  QI  +L
Sbjct: 1   MVSDQDLAKGVETLLRQS----DPSSLTSLSSIVQQLEAKLGLDLTEKTTFIRDQINILL 60

Query: 61  RSHPQXXXXXXXXXXXXXXXXXXXXXXXXQKDL-------------FALHQSPNFQSAPS 120
           R+H       XXXXXXXXXXXXXXXXXXX   L             F L     F  +  
Sbjct: 61  RAHQNPSASVXXXXXXXXXXXXXXXXXXXXXXLHSGVNVPPMAKGHFTLSHPSQFSVSSQ 120

Query: 121 PTSSAFHTFSAQPPP-------AKPDSVVAP--------------------------TVP 180
                 H F+ QPP         +P  V  P                          ++ 
Sbjct: 121 SQQYPSH-FALQPPYHSYDLNFRQPYPVYMPXXXXXXXXXXXXXXXXXXXLSHGGNASLS 180

Query: 181 GSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQ 240
            +  PKES    TKR+GGPGGLNK+C VSPEL+ +VG+P LPRTEIV+QLWAYIRKNNLQ
Sbjct: 181 VNQAPKESAPAGTKRKGGPGGLNKVCRVSPELEVVVGEPALPRTEIVRQLWAYIRKNNLQ 240

Query: 241 DPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS-SSKKARVENESAVS 300
           DPSNKRKIIC+D LR+VFETDCTDMFKMNKLLAKHI+PL+P+K S  +KKA+ E E+   
Sbjct: 241 DPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHILPLDPSKDSGQAKKAKTEVET--K 300

Query: 301 VKSAEP----SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAV 343
            ++ EP    +I  +V +SE L  FFG    EM   E++RR+WEYIK+N+LEDP+NPMA+
Sbjct: 301 TETTEPISSTAISSTVTLSEPLGKFFGTGETEMADEEIIRRVWEYIKLNNLEDPVNPMAI 360

[Close]

BLAST of CsaV3_7G018820 vs. TAIR10
Match: AT3G19080.1 (SWIB complex BAF60b domain-containing protein)

HSP 1 Score: 154.1 bits (388), Expect = 1.6e-37
Identity = 81/203 (39.90%), Postives = 120/203 (59.11%), Query Frame = 0


Query: 148 KRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDE 207
           KR+GG GG  K+C +SPELQA  G  EL RTE+VK LW YI++NNLQDP++KR IIC++ 
Sbjct: 257 KRKGG-GGFAKVCSLSPELQAFTGVTELARTEVVKLLWKYIKENNLQDPNDKRSIICDES 316

Query: 208 LRLVFETDCTDMFKMNKLLAKHIIPLE-------PTKPSSSKKARVENES-----AVSVK 267
            R +F  +  +MF+MNK L KHI PLE        +K   + K ++E++           
Sbjct: 317 FRSLFPVESINMFQMNKQLTKHIWPLEDNAGESVSSKSPKNGKQKMESDGDSXXXXXXXX 376

Query: 268 SAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKL 327
                +   + +S+AL  F G     + +++V++R+WEYI  N L+DP +   V+CD KL
Sbjct: 377 XXXXEVLAPLPLSDALVKFLGDGENSLSRADVVKRLWEYINHNDLQDPSDKRRVICDEKL 436

Query: 328 RELFGCESISALGIPEVLGRHHI 339
           +ELF  +S     + ++L  H I
Sbjct: 437 KELFEVDSFEDTSVSKLLTNHFI 458

[Close]

BLAST of CsaV3_7G018820 vs. TAIR10
Match: AT1G49520.1 (SWIB complex BAF60b domain-containing protein)

HSP 1 Score: 100.5 bits (249), Expect = 2.1e-21
Identity = 44/85 (51.76%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 146 KTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICN 205
           K K+RG  GG NK+C +SP+L+  +G  +L RTE+VK++WAYIR+++LQDP+N+R I+C+
Sbjct: 94  KAKKRG--GGFNKICQLSPQLEKFLGTSQLARTEVVKKMWAYIREHDLQDPTNRRNILCD 153

Query: 206 DELRLVFETDCTDMFKMNKLLAKHI 231
           + L  +F     +MF+MNK LAKHI
Sbjct: 154 ESLHSLFRVKTINMFQMNKALAKHI 176

[Close]

BLAST of CsaV3_7G018820 vs. TAIR10
Match: AT4G34290.1 (SWIB/MDM2 domain superfamily protein)

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-13
Identity = 33/80 (41.25%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 153 PGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVF 212
           P G+ K   VS  +Q +VG PE+PRT+ +K++WAYI++++LQDP NKR I+C+++L+ +F
Sbjct: 65  PRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIF 124

Query: 213 E-TDCTDMFKMNKLLAKHII 232
           E  +     ++ KL+  H +
Sbjct: 125 EGKERVGFLEIAKLIGPHFL 144

[Close]

BLAST of CsaV3_7G018820 vs. TAIR10
Match: AT2G35605.1 (SWIB/MDM2 domain superfamily protein)

HSP 1 Score: 72.8 bits (177), Expect = 4.7e-13
Identity = 37/89 (41.57%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 142 STQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRK 201
           ST  KT R+G   G+ K+  VS  L   +G+ E+ RT  VK++W YI+ NNLQ+P NKR+
Sbjct: 18  STGAKTGRQG--TGILKVVPVSKPLANFIGENEVSRTTAVKKIWEYIKLNNLQNPVNKRE 77

Query: 202 IICNDELRLVFE-TDCTDMFKMNKLLAKH 230
           I+C+++L+ +F   D     +++KLL++H
Sbjct: 78  ILCDEQLKTIFSGKDTVGFLEISKLLSQH 104

[Close]

BLAST of CsaV3_7G018820 vs. Swiss-Prot
Match: sp|Q05024|TRI1_YEAST (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 7.6e-13
Identity = 38/96 (39.58%), Postives = 62/96 (64.58%), Query Frame = 0


Query: 162 VSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFK 221
           +S  LQ  +G  ELPRT++VK +W YI++++LQ+P ++R+I+C++++  +F    T MF 
Sbjct: 126 LSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKKMT-MFS 185

Query: 222 MNKLLAKHII-------PLEPTKPSSSKKARVENES 251
           MNKLL KH+          E  K +  K+ ++ENES
Sbjct: 186 MNKLLTKHLFNPDEIVKHEEEQKQTPEKEIKLENES 220

[Close]

BLAST of CsaV3_7G018820 vs. Swiss-Prot
Match: sp|Q08747|UAF30_YEAST (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 7.6e-13
Identity = 36/78 (46.15%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 162 VSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFK 221
           +S  L +++G+ EL RTE+V++LWAYI+ +NLQ+P+NK++I+C+++L L+     T+MF+
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILGKS-TNMFE 185

Query: 222 MNKLLAKHIIPLEPTKPS 240
           M+K+LA H+   EP K S
Sbjct: 186 MHKILASHM--TEPKKIS 200

[Close]

BLAST of CsaV3_7G018820 vs. Swiss-Prot
Match: sp|O74503|UAF30_SCHPO (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-09
Identity = 29/57 (50.88%), Postives = 42/57 (73.68%), Query Frame = 0


Query: 170 VGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLL 227
           +G  +L R + VK+LW YI+ ++LQDP++KR I+C+D+L+ VFE D   MF MNK L
Sbjct: 131 LGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTILCDDKLKSVFEVDTLHMFTMNKYL 187

[Close]

BLAST of CsaV3_7G018820 vs. Swiss-Prot
Match: sp|Q9P7S3|SSR3_SCHPO (SWI/SNF and RSC complexes subunit ssr3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ssr3 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.8e-04
Identity = 25/67 (37.31%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 169 IVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAK 228
           I+G  E  R +IV  LW YI+ + LQD   KR I C+  LR +FE D     ++ +L+ +
Sbjct: 215 ILGIREGTRPDIVSYLWQYIKFHRLQDMEEKRLINCDKALRDLFEADRLYFPRIPELMNR 274

Query: 229 HIIPLEP 236
            + P++P
Sbjct: 275 FLEPIDP 281

[Close]

BLAST of CsaV3_7G018820 vs. Swiss-Prot
Match: sp|Q2TBN1|SMRD1_BOVIN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Bos taurus OX=9913 GN=SMARCD1 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 6.5e-04
Identity = 27/96 (28.12%), Postives = 45/96 (46.88%), Query Frame = 0


Query: 153 PGGLNKLCGV-------------SPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 212
           PG +N  C V              P L  ++G     R  I++ LW YI+ + LQDP  +
Sbjct: 275 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 334

Query: 213 RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEP 236
             +IC+  L+ +FE+      ++ + L   ++P EP
Sbjct: 335 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 370

[Close]

BLAST of CsaV3_7G018820 vs. TrEMBL
Match: tr|A0A0A0LEG4|A0A0A0LEG4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 5.8e-175
Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120
           RSHPQXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP
Sbjct: 61  RSHPQXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120

Query: 121 PPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI 180
           PPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI
Sbjct: 121 PPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI 180

Query: 181 VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS 240
           VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS
Sbjct: 181 VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS 240

Query: 241 SKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHL 300
           SKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHL
Sbjct: 241 SKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHL 300

Query: 301 EDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343
           EDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 EDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342

[Close]

BLAST of CsaV3_7G018820 vs. TrEMBL
Match: tr|A0A1S3BI07|A0A1S3BI07_CUCME (uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490111 PE=4 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 2.3e-171
Identity = 339/343 (98.83%), Postives = 340/343 (99.13%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQ-XXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFSAQ 120
           RSHPQ XXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTF+AQ
Sbjct: 61  RSHPQXXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120

Query: 121 PPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180
           PP AK DSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE
Sbjct: 121 PPTAKADSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300
           SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH
Sbjct: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300

Query: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343
           LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of CsaV3_7G018820 vs. TrEMBL
Match: tr|A0A1S4DX10|A0A1S4DX10_CUCME (box A-binding factor isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490111 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 1.7e-147
Identity = 301/305 (98.69%), Postives = 302/305 (99.02%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQ-XXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFSAQ 120
           RSHPQ XXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTF+AQ
Sbjct: 61  RSHPQXXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120

Query: 121 PPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180
           PP AK DSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE
Sbjct: 121 PPTAKADSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300
           SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH
Sbjct: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300

Query: 301 LEDPL 305
           LEDPL
Sbjct: 301 LEDPL 305

[Close]

BLAST of CsaV3_7G018820 vs. TrEMBL
Match: tr|M5WHH4|M5WHH4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G228000 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 2.6e-111
Identity = 249/351 (70.94%), Postives = 280/351 (79.77%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPN----PFSSLNAVVQELQTKLGLDLSHKLDFIHAQI 60
           MVT+QE+SQA+Q L+ D+ S  NPN     F++LN VVQ+L+++LGLDLSHK DFI  QI
Sbjct: 1   MVTEQEISQALQALIHDTTS--NPNTTTPTFTTLNDVVQQLESRLGLDLSHKTDFIRTQI 60

Query: 61  QFILRSH-PQXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHT 120
            +  RSH P XXXXXXXXXXXXXXXXXXXXXXXX KD FAL+Q PN+     PT SAF T
Sbjct: 61  HYFFRSHPPXXXXXXXXXXXXXXXXXXXXXXXXXPKDHFALNQPPNYH---HPTPSAFQT 120

Query: 121 FSAQPPP----AKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVG 180
           FS+QPPP     +P S    +V GS+ PK+S + K KR+GGPGGLNKLCGVSPELQ IVG
Sbjct: 121 FSSQPPPPLLKPEPGSAAPVSVSGSNTPKDSAKPKAKRKGGPGGLNKLCGVSPELQVIVG 180

Query: 181 QPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII 240
            P LPRTEIVKQLWAYIRKNNLQDP NKRKIICN+ELRLVFETDCTDMFKMNKLLAKHII
Sbjct: 181 HPTLPRTEIVKQLWAYIRKNNLQDPGNKRKIICNEELRLVFETDCTDMFKMNKLLAKHII 240

Query: 241 PLEPTKPSSSKKARVENESAVS-VKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRR 300
            LEP+K S  KK +V   +  S  KS EP   PS+IISEALANFFGV  REMLQSEVL R
Sbjct: 241 ALEPSKQSVPKKPKVPKVAVESRTKSTEPG--PSLIISEALANFFGVGAREMLQSEVLMR 300

Query: 301 IWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRR 342
           IWEYIKVNHLEDP NPMA+ CDAKL+E+FGCESISAL IP++L RHHIFRR
Sbjct: 301 IWEYIKVNHLEDPQNPMAIQCDAKLQEIFGCESISALEIPDILERHHIFRR 344

[Close]

BLAST of CsaV3_7G018820 vs. TrEMBL
Match: tr|A0A1S2Y6A8|A0A1S2Y6A8_CICAR (uncharacterized protein LOC101504815 OS=Cicer arietinum OX=3827 GN=LOC101504815 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.2e-108
Identity = 242/345 (70.14%), Postives = 276/345 (80.00%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MVT++E+S+AI  L R+S   T    F++LN VVQELQ+KLG DL+HKLDFI +QI  + 
Sbjct: 1   MVTEEEISEAIHSLFRESNPRT--RTFTTLNQVVQELQSKLGHDLTHKLDFITSQINLLF 60

Query: 61  ---RSHPQXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFS 120
                   XXXXXXXXXXXXXXXXXXXXXXXX KD FALHQ+PN  S P  TS++FHT  
Sbjct: 61  AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDHFALHQNPNSHSVP-VTSASFHTLP 120

Query: 121 AQPPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPR 180
                        P +  ++  KES Q K KRRGGPGGLNKLCGVSPELQ IVGQP LPR
Sbjct: 121 TNSVALDAPVTQPPPLSANEVTKESVQPKAKRRGGPGGLNKLCGVSPELQVIVGQPALPR 180

Query: 181 TEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTK 240
           TEIVKQLWAYI+KNNLQDPSNKRKIICNDELR+VFETDCTDMFKMNKLLAKHII LEPTK
Sbjct: 181 TEIVKQLWAYIKKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIIALEPTK 240

Query: 241 PSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKV 300
             + KK +V+ E  +  +SAEP+  PSVIIS++LANFFG+ GREMLQ+EVLRRIWEYIKV
Sbjct: 241 QPAPKKQKVDVE--LGTRSAEPT--PSVIISDSLANFFGISGREMLQTEVLRRIWEYIKV 300

Query: 301 NHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343
           NHLEDP+NPMA++CDAKL+E+FGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 NHLEDPVNPMAIMCDAKLQEIFGCESISALGIPEVLGRHHIFRRS 338

The following BLAST results are available for this feature:

BLAST of CsaV3_7G018820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150254.1	8.7e-175	100.00	PREDICTED: angiomotin [Cucumis sativus] >KGN59077.1 hypothetical protein Csa_3G7...	[more]
XP_008447697.1	3.4e-171	98.83	PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_022981538.1	5.0e-154	86.30	uncharacterized protein LOC111480626 [Cucurbita maxima]	[more]
XP_022941247.1	6.5e-154	86.30	uncharacterized protein LOC111446611 [Cucurbita moschata]	[more]
XP_023525496.1	8.5e-154	86.01	uncharacterized protein LOC111789084 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_7G018820 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22360.1	5.8e-80	49.62	SWIB complex BAF60b domain-containing protein	[more]
AT3G19080.1	1.6e-37	39.90	SWIB complex BAF60b domain-containing protein	[more]
AT1G49520.1	2.1e-21	51.76	SWIB complex BAF60b domain-containing protein	[more]
AT4G34290.1	1.2e-13	41.25	SWIB/MDM2 domain superfamily protein	[more]
AT2G35605.1	4.7e-13	41.57	SWIB/MDM2 domain superfamily protein	[more]

BLAST of CsaV3_7G018820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q05024\|TRI1_YEAST	7.6e-13	39.58	Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]
sp\|Q08747\|UAF30_YEAST	7.6e-13	46.15	Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATC...	[more]
sp\|O74503\|UAF30_SCHPO	1.0e-09	50.88	Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 97...	[more]
sp\|Q9P7S3\|SSR3_SCHPO	3.8e-04	37.31	SWI/SNF and RSC complexes subunit ssr3 OS=Schizosaccharomyces pombe (strain 972 ...	[more]
sp\|Q2TBN1\|SMRD1_BOVIN	6.5e-04	28.13	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]

BLAST of CsaV3_7G018820 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LEG4\|A0A0A0LEG4_CUCSA	5.8e-175	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1	[more]
tr\|A0A1S3BI07\|A0A1S3BI07_CUCME	2.3e-171	98.83	uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S4DX10\|A0A1S4DX10_CUCME	1.7e-147	98.69	box A-binding factor isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490111 PE=4 SV=...	[more]
tr\|M5WHH4\|M5WHH4_PRUPE	2.6e-111	70.94	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G228000 PE=4 SV=1	[more]
tr\|A0A1S2Y6A8\|A0A1S2Y6A8_CICAR	1.2e-108	70.14	uncharacterized protein LOC101504815 OS=Cicer arietinum OX=3827 GN=LOC101504815 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036885	SWIB_MDM2_dom_sf
IPR014876	DEK_C
IPR003121	SWIB_MDM2_domain
IPR019835	SWIB_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G018820.1	CsaV3_7G018820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 156..235 e-value: 1.2E-44 score: 164.3 coord: 261..342 e-value: 1.6E-9 score: 47.6
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 159..230 e-value: 6.0E-28 score: 96.4 coord: 266..336 e-value: 6.6E-18 score: 64.3
IPR014876	DEK, C-terminal	PFAM	PF08766	DEK_C	coord: 2..58 e-value: 1.4E-6 score: 28.0
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	G3DSA:1.10.245.10		coord: 151..241 e-value: 8.5E-31 score: 107.7 coord: 258..341 e-value: 4.1E-20 score: 73.5
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	SSF47592	SWIB/MDM2 domain	coord: 149..235
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	SSF47592	SWIB/MDM2 domain	coord: 260..337
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..117
None	No IPR available	PANTHER	PTHR13844	BRG-1 ASSOCIATED FACTOR 60 BAF60	coord: 122..339
None	No IPR available	PANTHER	PTHR13844	BRG-1 ASSOCIATED FACTOR 60 BAF60	coord: 1..92
None	No IPR available	PANTHER	PTHR13844:SF10	SUBFAMILY NOT NAMED	coord: 1..92
None	No IPR available	PANTHER	PTHR13844:SF10	SUBFAMILY NOT NAMED	coord: 122..339

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G018820	CSPI03G34350	Wild cucumber (PI 183967)	cpicucB196
CsaV3_7G018820	Cucsa.281620	Cucumber (Gy14) v1	cgycucB431
CsaV3_7G018820	CmaCh01G011040	Cucurbita maxima (Rimu)	cmacucB0585
CsaV3_7G018820	CmoCh01G011500	Cucurbita moschata (Rifu)	cmocucB0575
CsaV3_7G018820	Cp4.1LG02g00820	Cucurbita pepo (Zucchini)	cpecucB0733
CsaV3_7G018820	CsGy7G008480	Cucumber (Gy14) v2	cgybcucB347
CsaV3_7G018820	Carg22386	Silver-seed gourd	carcucB0924
CsaV3_7G018820	Cla003271	Watermelon (97103) v1	cucwmB594
CsaV3_7G018820	MELO3C013104	Melon (DHL92) v3.5.1	cucmeB541
CsaV3_7G018820	ClCG09G020920	Watermelon (Charleston Gray)	cucwcgB549
CsaV3_7G018820	Lsi02G018680	Bottle gourd (USVL1VR-Ls)	cuclsiB539
CsaV3_7G018820	MELO3C013104.2	Melon (DHL92) v3.6.1	cucmedB528
CsaV3_7G018820	Cla97C09G182350	Watermelon (97103) v2	cucwmbB595
CsaV3_7G018820	Bhi09G001434	Wax gourd	cucwgoB734

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G018820	Cucurbita maxima (Rimu)	cmacucB0052
CsaV3_7G018820	Cucurbita moschata (Rifu)	cmocucB0038
CsaV3_7G018820	Cucurbita pepo (Zucchini)	cpecucB0991
CsaV3_7G018820	Wild cucumber (PI 183967)	cpicucB414
CsaV3_7G018820	Wild cucumber (PI 183967)	cpicucB416
CsaV3_7G018820	Silver-seed gourd	carcucB0946