Carg22386 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22386
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Upstream activation factor subunit spp27
Location	Cucurbita_argyrosperma_scaffold_155 : 169671 .. 175096 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAGAGAGAAAGGAAGAAGAAGAAGAGAGAGAAAGAGAGAGAGTTCTTGAGAGAGAAAGAGAGAGAGAGTTCTTGAGAGAGATAGAGTGAAGCCGAGGAAGCAAGGGACCGTTAATTTCGGTTAATTTATGAACCAATTTTGAGCAGCAGCAGCAGCAGCAGCAGCTACAAGAAGCTAAAATGGTTTCAGACCAAGAGCTTTCTGAAGCTTTACAATGTCTCTTACGCGATTCCGCTTCTCCTTCAAACCCTAACCCTTTTTCTTCCCTCAACGCTGTTGTTCTTGAGTTGCAGTCCAAGCTTGGCCTCGATTTGTCTCATAAGGTTGATTTCATCCATGCTCAGATTCAGCTAATCCTTCGCTCTCATCCTCAACAGCCTCAAATTCATCAGAATCATCATCATCAACAGCAGCAACCACCGCCTTCTTCGCAGAAAGACATCCTTCCCCCCCATCAAAGCCCTAATTTCCCATCTGCTCCTTCCCCCACTTCCTCTGCTTTTCATACTTTCACTGCTCAGCCTCCTCCGGCTAAGCCGGAAACCGCCGCCGCTCCTTCCACTGCTGTCGGTTCTGACCCGCCGAAGGAGAGGTGGGTTCTTCGAATTTTAGAATTCTGGCTCTTTTTGAGTCCCCTCACTTTTGATTTACTTCGTTTTGGGTGTGCATGTTTGTGCGAATCTCTTTCAATTTTGAAGTGTAGTTGATTTTCTAGTGTAATCGAGTAAGGGTAGGAGTTATTTGTGAAATTCGCTACTTCAGCAGTTCAGAAATAGGGCCAGAAGGTATTGAAATTGTTTGTTTACTTGCTTTGACCTTTGCTGTGAGGGTTTTGGAGTGTGTAGTGCACTAATTACTGGTTTTTCTCGAGGGTTTCGATATTGTTAAGTTTCCATTGAATGTTGGTGAGCCCCTGCTTAGTTAATCTCTGTGTTCAGAAGATTACTCAGAGTTTCTGTGACTTTCTGCTTTTGTCTTGGCTGTTGAAAAAGTAAATTGCCTGTTATGATGTCTTGTCAAATGAGTGTTCATAGGTATCTAATACGAGCACGTTGAGTTTTCATTTGTTTTTTGTTTGTTTCCTTTAAAGCCTAGAACAACTAGTTGCTAGTCTGGTCAGCACAGCCATTGAAGATATATAGACAAAATTTTCATGGGAATTTGTAACTTTGGATTTGTGCATCAGCACGGAAGGTAATTAGATGAGGATGGAAGCTGCCCCAGTTTACTGGAAATAGATATCGATATATGGCATCTACTTGTGAGGAATCTTTATATTGTATGTGCACTTTTCTATAAAAATCGCTATAACTTTTCCAATCTGGGCTTACTTTTATTGTGCAATCAAGCCATGTGGCTTAGAGCTTGTAATCCTGTTGAATCTGCATATCAGCTGGTAGCCGTAAGCATGGATTTTTGTTTGTTCTCTTGTTTTGATAACCTGAATATGTATCTTCTGGCTGATTAAACTCACCTTTACTGCTCGAATGCAGCACTCAGACCAAGACTAAGAGAAGAGGAGGCCCGGGCGGGCTAAACAAGCTTTGTGGCGTTTCTCCTGAACTTCAGACAATTGTTGGGCAACCAGAATTGCCAAGAACTGAGGTTCTTACCACTTTCTTATTTGATTTTCTATTTATTACATATGAGGTTCATATGATGCTTTTGCCTTGATCCAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAATAACCTACAGGATCCGAGTAACAAAAGAAAAATAATATGCAACGATGAGTTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTAGCCAAGCACATCATTTCTCTTGAACCTACAAGTAAGTATCCAGTTTGATTCCCCTGTGCCCCTTTGGTTCTGGAAGAAATCAACAGTTTATTTTATAATCCTGTCAGAACCGTCAAGTTCGAAGAAGGCACGAGTGGAGAGTGAACCTGCAATTGCTGTAAAAGCTGCAGAACCTAGTGTTTGTCCTTCTGTGATTATATCTGAAGCTCTTGCAAGTTTTTTTGGTGTTGATGGAAGGGAGATGCTCCAATCAGAGGTTCTGAGACGCATATGGGAATACATAAGAGCCAATCATCTTGAGGTTTGAAAATAAACTATTGCAACTTTCACCTTCTTGCATTTTGTCTATCTATCGTAATGAGTAATACTTTCCATGAACTTCCGTCAAACTTATTGAGCCTTTTACTTTTCTTTCTCATATAAATTAAACGAAGTACTGGAATGATTTAGTTCCTAATTTATACACCTGATCTGAGGATTTAAAAGAAAATCGTGTCTGTTTATATAGATTATTACTATTCTGTTTTGCATGACATTTAAAATGTTTTCCAATTAGTCTTGCACCAGTTCTTCAACGTGATACATCATTTGTTTGTAAAATGATTTGGGAACGAATCATTCCTTATAAGGGTGTAGAAGCTCGAAAGAGAAAGCCCAAAGAGGACAATATTTGCTAGCGGGGGGCTTGGGCTGTTATGAATCGTATCAGAGCTAGACACTGGGCGGTATGTTAGCGAGGACGTTGGCTCCCAAAGGGGGTAGAGTGTGAGATCTCACATCGGTTGGAGAGGGAAACGAAACGTTTCTTGTAATGTAGAAACCTCTCCCTAGCAGATGCATTTTAAAACCTTGAAGGGAAGCCCGAAAGGGAAAACTCAAAGAGGACAATATTTGATAGCGGTGGGCTTGGGCTGTTACAAATGATATCAGAGTCAGACACCGGGCGGTGTGCCAGTGAGGACGCTGGGCTTCCAAGGGGGTGGATTGTGAGATCCCATATTGGTTGGAGAGGGGAACAAAACATTCTTTATGAGGGACCCTTATAAAGAATGTTTCGTTCCCCTCTCCCTAGCAACGCGTTTAAAATCTTGAGGGAAACCCGAAAGGGAAAGCCCAAAGAGCACAATATTTGCTAGCTTTGGGCTTGGGCTGTTACAAATAGTATCAGAGCCAGACACCAGGCGGTGTGCCAGCGAGGACGCTGGGCCTCCAAAGGGGGTAGATTGTGAGATCTCACATCGGTTGGAGAGAGGAACGAAACATTCCTTATAAGAATGTGTAAACCTCTCCCTAGTAGATGCGGTTAAAACCTTGAGGGGAAATCCGAAAGGAAAAACCCAAAGAGGACAATATTTGCTCGCGGTGGGCTTGTGCGGTTACAATAATAACAATACTAATCTTGGATGTTGTTCTCCCATTTTTCCGTTATCATTCACTTAAATTGAAATGGCCTGTGTTTTGGGATTGTAAAAACAGGACCCACTAAACCCAATGGCGGTGTTGTGTGATGCAAAACTCCAAGAACTGTTTGGCTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCACATATTTAGGAGATCATGATTGCTAATCTTCTAGGATGGTTAGTGCATTCTAACTTTCTTATATATTAAAACTGATATCTGAGTTGAATCCTTCTCTGGAGTATTAACTTCCTTGTTGGCTTCATCATAATTCACATTTTTCAAAAGCATATCATTTGATCGATTGAAATTTCTTAGTGTTGGAGGCTGCTGATATGTTCTTCTGTTTGCTAGGAAAGATGGCTGGATAAAGAGAACTGTAGAATTGATTATTACACCGTAGGAGTTCACCTAGGATTCCAAACTTGACAGACAAGCCCTGACATGTTAAAATATCTTCTAGAAACTTATGAGTCTGACATACTCTACCACCATGAAAAGGATAAAAACTGTAATAGCCTAAGCCCACCGCTAGTAGATATTGTCCTCTTTGGGCTTTCCCTTTCGAACTTCCCCTCAAGGTTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCACACCTTTATAAAGAATGCTTCATTCTCCTTCCCAGCCGATGTGAAATCTTACAATCTACCCCCTTCAGGGCCTAGTGTCCTCGCTGGCACTCGTTCCCTTCTTTGGGACCCCCCCCAATCCACCCCGTCCTTACTAGCACATCGCCTCGTGTCCACCCCCTTCGGGGTTCAATCTCCTTGCTGGCACATCTCCCGGTGTTTAGCTCTTATAACACTTGTAATAGCCGAAGCCCACCGATAGCAGATATTGTTTTCTTTGGGTTTTCCCTTTCGGACTTCCCCTCAAGGTTTTTAAAACACGTCTACTAGGGAGAAGTTTCCACACCCTTATAAATAATGCTTCCTTCTCCTCCCCAACCGATGTGAGATCTTACAATCCACCCCCCTTCAGGACTCAGTGTTCTCGCTAGCACTCGTTCCATTCTCTGGGACCCCCCAATCCACCCGTCCTTACTAGCACATCGCCTTGTGTCCACCCTCCTCGAGGTTCAATCTCTTTGTTGGCACATCTTCCGGTGTTTGGCTCTTATAACATTTGTAATAGCCCAAGCCCACTGATAGCAGATATTGTCTTCTTTGGACTTTCCCTTTCGGACCTCCCTTCAAGGTCTTCAAAAACGCGTCTACTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCCTTCTCCTCCCCAATCGATGTGAGATCTTACAAAAACACACTTAATTCGGTCTAGTTAATCTAATCTGACACTATAGACATCTAATGAAACATACTAATTACTGCTACCCATGAATGTATTCCTGTACAAAGTTATCTTTTTAGTATGGATACCTGAGCAAAATAATTTGCAGCTTTGAATTTCAAAGTACTGTCGTTTCCTTTTTCCTTTCTCCTTTTCAAAAAAAAAAAGAACTGAAGGATTAGCTTTTTGTAGCATGCTTTACCTTTAGTTGAAGAATTTGTTTCTTCTACTTTTTCTTTTTCAAAAAAGCACCAAAGTAAGGATTGGGCAGAAGAAGGACAAACTAATGAACATCGATCCTTGATTGCATTTGCAGATCGATGGCGTTAGCGACTTATATCGGTGCAGTGTTCGGAAAAGTCGATATATATATATATATATGAAATGTTGTAAGCAGTGATTTTAATATTGTACTTGTGGATGTTATATTAAGGTTAGTAAGTAAGGTGTGAACTTGGGAATGTAAGATGGGGGCTTATGGCAGAGTTTATTTTGCAATTGCCTGCCGAAGTCCTTTGGGTGGTTTCCATTTGTCTGACTTTGTATTTAGGTTTAGAATGAGCTTTGGAGTTTCTAACATCCTTACACTCTGCTGATTATGGATAAAACTATATGTTCTATGTAGTAAAAGTTTAGCCTTTACTCTGCTTTCTTCTCTGTCTCTGTGTAGAAAGGCTTGCTAAGGGACGCCCTTTCTTTACCCTTAGCTTTATCTTACGAGTTCAAAGGTATTTTTCTCGACCGAGAAGGTTACACGTTCAAATTTTCGTCGTTGAATTGCATGATAGATAATAGTAGCGTTTTCAATATGTATTTC

mRNA sequence

AAAGAGAGAGAAAGGAAGAAGAAGAAGAGAGAGAAAGAGAGAGAGTTCTTGAGAGAGAAAGAGAGAGAGAGTTCTTGAGAGAGATAGAGTGAAGCCGAGGAAGCAAGGGACCGTTAATTTCGGTTAATTTATGAACCAATTTTGAGCAGCAGCAGCAGCAGCAGCAGCTACAAGAAGCTAAAATGGTTTCAGACCAAGAGCTTTCTGAAGCTTTACAATGTCTCTTACGCGATTCCGCTTCTCCTTCAAACCCTAACCCTTTTTCTTCCCTCAACGCTGTTGTTCTTGAGTTGCAGTCCAAGCTTGGCCTCGATTTGTCTCATAAGGTTGATTTCATCCATGCTCAGATTCAGCTAATCCTTCGCTCTCATCCTCAACAGCCTCAAATTCATCAGAATCATCATCATCAACAGCAGCAACCACCGCCTTCTTCGCAGAAAGACATCCTTCCCCCCCATCAAAGCCCTAATTTCCCATCTGCTCCTTCCCCCACTTCCTCTGCTTTTCATACTTTCACTGCTCAGCCTCCTCCGGCTAAGCCGGAAACCGCCGCCGCTCCTTCCACTGCTGTCGGTTCTGACCCGCCGAAGGAGAGCACTCAGACCAAGACTAAGAGAAGAGGAGGCCCGGGCGGGCTAAACAAGCTTTGTGGCGTTTCTCCTGAACTTCAGACAATTGTTGGGCAACCAGAATTGCCAAGAACTGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAATAACCTACAGGATCCGAGTAACAAAAGAAAAATAATATGCAACGATGAGTTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTAGCCAAGCACATCATTTCTCTTGAACCTACAAAACCGTCAAGTTCGAAGAAGGCACGAGTGGAGAGTGAACCTGCAATTGCTGTAAAAGCTGCAGAACCTAGTGTTTGTCCTTCTGTGATTATATCTGAAGCTCTTGCAAGTTTTTTTGGTGTTGATGGAAGGGAGATGCTCCAATCAGAGGTTCTGAGACGCATATGGGAATACATAAGAGCCAATCATCTTGAGGACCCACTAAACCCAATGGCGGTGTTGTGTGATGCAAAACTCCAAGAACTGTTTGGCTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCACATATTTAGGAGATCATGATTGCTAATCTTCTAGGATGATCGATGGCGTTAGCGACTTATATCGGTGCAGTGTTCGGAAAAGTCGATATATATATATATATATGAAATGTTGTAAGCAGTGATTTTAATATTGTACTTGTGGATGTTATATTAAGGTTAGTAAGTAAGGTGTGAACTTGGGAATGTAAGATGGGGGCTTATGGCAGAGTTTATTTTGCAATTGCCTGCCGAAGTCCTTTGGGTGGTTTCCATTTGTCTGACTTTGTATTTAGGTTTAGAATGAGCTTTGGAGTTTCTAACATCCTTACACTCTGCTGATTATGGATAAAACTATATGTTCTATGTAGTAAAAGTTTAGCCTTTACTCTGCTTTCTTCTCTGTCTCTGTGTAGAAAGGCTTGCTAAGGGACGCCCTTTCTTTACCCTTAGCTTTATCTTACGAGTTCAAAGGTATTTTTCTCGACCGAGAAGGTTACACGTTCAAATTTTCGTCGTTGAATTGCATGATAGATAATAGTAGCGTTTTCAATATGTATTTC

Coding sequence (CDS)

ATGGTTTCAGACCAAGAGCTTTCTGAAGCTTTACAATGTCTCTTACGCGATTCCGCTTCTCCTTCAAACCCTAACCCTTTTTCTTCCCTCAACGCTGTTGTTCTTGAGTTGCAGTCCAAGCTTGGCCTCGATTTGTCTCATAAGGTTGATTTCATCCATGCTCAGATTCAGCTAATCCTTCGCTCTCATCCTCAACAGCCTCAAATTCATCAGAATCATCATCATCAACAGCAGCAACCACCGCCTTCTTCGCAGAAAGACATCCTTCCCCCCCATCAAAGCCCTAATTTCCCATCTGCTCCTTCCCCCACTTCCTCTGCTTTTCATACTTTCACTGCTCAGCCTCCTCCGGCTAAGCCGGAAACCGCCGCCGCTCCTTCCACTGCTGTCGGTTCTGACCCGCCGAAGGAGAGCACTCAGACCAAGACTAAGAGAAGAGGAGGCCCGGGCGGGCTAAACAAGCTTTGTGGCGTTTCTCCTGAACTTCAGACAATTGTTGGGCAACCAGAATTGCCAAGAACTGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAATAACCTACAGGATCCGAGTAACAAAAGAAAAATAATATGCAACGATGAGTTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTAGCCAAGCACATCATTTCTCTTGAACCTACAAAACCGTCAAGTTCGAAGAAGGCACGAGTGGAGAGTGAACCTGCAATTGCTGTAAAAGCTGCAGAACCTAGTGTTTGTCCTTCTGTGATTATATCTGAAGCTCTTGCAAGTTTTTTTGGTGTTGATGGAAGGGAGATGCTCCAATCAGAGGTTCTGAGACGCATATGGGAATACATAAGAGCCAATCATCTTGAGGACCCACTAAACCCAATGGCGGTGTTGTGTGATGCAAAACTCCAAGAACTGTTTGGCTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCACATATTTAGGAGATCATGA

Protein sequence

MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLILRSHPQQPQIHQNHHHQQQQPPPSSQKDILPPHQSPNFPSAPSPTSSAFHTFTAQPPPAKPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

Homology

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BLAST of Carg22386 vs. NCBI nr
Match: XP_022941247.1 (uncharacterized protein LOC111446611 [Cucurbita moschata])

HSP 1 Score: 616.7 bits (1589), Expect = 4.7e-173
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60
           MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL
Sbjct: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60

Query: 61  RSHPQQPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQPPPAKP 120
           RSHPQQPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQPPPAKP
Sbjct: 61  RSHPQQPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQPPPAKP 120

Query: 121 ETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQL 180
           ETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQL
Sbjct: 121 ETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQL 180

Query: 181 WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKA 240
           WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKA
Sbjct: 181 WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKA 240

Query: 241 RVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLEDPL 300
           RVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLEDPL
Sbjct: 241 RVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLEDPL 300

Query: 301 NPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 339
           NPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 NPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

[Close]

BLAST of Carg22386 vs. NCBI nr
Match: XP_023525496.1 (uncharacterized protein LOC111789084 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 616.3 bits (1588), Expect = 6.2e-173
Identity = 337/338 (99.70%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60
           MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL
Sbjct: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60

Query: 61  RSHPQQPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQPPPAKP 120
           RSHPQQPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQPPPAKP
Sbjct: 61  RSHPQQPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQPPPAKP 120

Query: 121 ETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQL 180
           ETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQL
Sbjct: 121 ETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQL 180

Query: 181 WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKA 240
           WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKA
Sbjct: 181 WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKA 240

Query: 241 RVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLEDPL 300
           RVESEPAIAVKAAEPSVCPSV+ISEALASFFGVDGREMLQSEVLRRIWEYIRANHLEDPL
Sbjct: 241 RVESEPAIAVKAAEPSVCPSVVISEALASFFGVDGREMLQSEVLRRIWEYIRANHLEDPL 300

Query: 301 NPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 339
           NPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 NPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

[Close]

BLAST of Carg22386 vs. NCBI nr
Match: XP_022981538.1 (uncharacterized protein LOC111480626 [Cucurbita maxima])

HSP 1 Score: 614.0 bits (1582), Expect = 3.1e-172
Identity = 336/338 (99.41%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60
           MVS+QELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL
Sbjct: 1   MVSEQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60

Query: 61  RSHPQQPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQPPPAKP 120
           RSHPQQPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQPPPAKP
Sbjct: 61  RSHPQQPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQPPPAKP 120

Query: 121 ETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQL 180
           ETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQL
Sbjct: 121 ETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQL 180

Query: 181 WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKA 240
           WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKA
Sbjct: 181 WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKA 240

Query: 241 RVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLEDPL 300
           RVE+EPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLEDPL
Sbjct: 241 RVENEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLEDPL 300

Query: 301 NPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 339
           NPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 NPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

[Close]

BLAST of Carg22386 vs. NCBI nr
Match: XP_004150254.1 (PREDICTED: angiomotin [Cucumis sativus] >KGN59077.1 hypothetical protein Csa_3G758990 [Cucumis sativus])

HSP 1 Score: 547.7 bits (1410), Expect = 2.7e-152
Identity = 296/343 (86.30%), Postives = 313/343 (91.25%), Query Frame = 0


Query: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60
           MV+DQELS+A+QCLLRDSASP+NPNPFSSLNAVV ELQ+KLGLDLSHK+DFIHAQIQ IL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQ-----QPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQP 120
           RSHPQ           XXXXXXXXXXXXX       HQSPNF SAPSPTSSAFHTF+AQP
Sbjct: 61  RSHPQXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120

Query: 121 PPAKPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTE 180
           PPAKP++  AP T  GSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQ IVGQPELPRTE
Sbjct: 121 PPAKPDSVVAP-TVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANH 300
           SSKKARVE+E A++VK+AEPS+CPSVIISEALA+FFGVDGREMLQSEVLRRIWEYI+ NH
Sbjct: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300

Query: 301 LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 339
           LEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342

[Close]

BLAST of Carg22386 vs. NCBI nr
Match: XP_008447697.1 (PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >XP_008447700.1 PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo])

HSP 1 Score: 542.7 bits (1397), Expect = 8.7e-151
Identity = 295/344 (85.76%), Postives = 311/344 (90.41%), Query Frame = 0


Query: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60
           MV+DQELS+A+QCLLRDSASP+NPNPFSSLNAVV ELQ+KLGLDLSHK+DFIHAQIQ IL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQ------QPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQ 120
           RSHPQ            XXXXXXXXXXXXX       HQSPNF SAPSPTSSAFHTFTAQ
Sbjct: 61  RSHPQXXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120

Query: 121 PPPAKPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRT 180
           PP AK ++  AP T  GSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQ IVGQPELPRT
Sbjct: 121 PPTAKADSVVAP-TVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRT 180

Query: 181 EIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKP 240
           EIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKP
Sbjct: 181 EIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKP 240

Query: 241 SSSKKARVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRAN 300
           SSSKKARVE+E A++VK+AEPS+CPSVIISEALA+FFGVDGREMLQSEVLRRIWEYI+ N
Sbjct: 241 SSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVN 300

Query: 301 HLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 339
           HLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 HLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Carg22386 vs. TAIR10
Match: AT4G22360.1 (SWIB complex BAF60b domain-containing protein)

HSP 1 Score: 281.2 bits (718), Expect = 8.5e-76
Identity = 191/390 (48.97%), Postives = 250/390 (64.10%), Query Frame = 0


Query: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60
           MVSDQ+L++ ++ LLR     S+P+  +SL+++V +L++KLGLDL+ K  FI  QI ++L
Sbjct: 1   MVSDQDLAKGVETLLRQ----SDPSSLTSLSSIVQQLEAKLGLDLTEKTTFIRDQINILL 60

Query: 61  RSH--PQQPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFP---------SAPSPTSSAFH 120
           R+H  P       XXXXXXXXXXXXXXXXXXX H   N P         S PS  S +  
Sbjct: 61  RAHQNPSASVXXXXXXXXXXXXXXXXXXXXXXLHSGVNVPPMAKGHFTLSHPSQFSVSSQ 120

Query: 121 T------FTAQPPP-------AKPETAAAP-------------------------STAVG 180
           +      F  QPP         +P     P                         ++   
Sbjct: 121 SQQYPSHFALQPPYHSYDLNFRQPYPVYMPXXXXXXXXXXXXXXXXXXXLSHGGNASLSV 180

Query: 181 SDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQLWAYIRKNNLQD 240
           +  PKES    TKR+GGPGGLNK+C VSPEL+ +VG+P LPRTEIV+QLWAYIRKNNLQD
Sbjct: 181 NQAPKESAPAGTKRKGGPGGLNKVCRVSPELEVVVGEPALPRTEIVRQLWAYIRKNNLQD 240

Query: 241 PSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPS-SSKKAR--VESEPAI 300
           PSNKRKIIC+D LR+VFETDCTDMFKMNKLLAKHI+ L+P+K S  +KKA+  VE++   
Sbjct: 241 PSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHILPLDPSKDSGQAKKAKTEVETKTET 300

Query: 301 AVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLEDPLNPMAVLCD 339
               +  ++  +V +SE L  FFG    EM   E++RR+WEYI+ N+LEDP+NPMA+ CD
Sbjct: 301 TEPISSTAISSTVTLSEPLGKFFGTGETEMADEEIIRRVWEYIKLNNLEDPVNPMAIQCD 360

[Close]

BLAST of Carg22386 vs. TAIR10
Match: AT3G19080.1 (SWIB complex BAF60b domain-containing protein)

HSP 1 Score: 149.1 bits (375), Expect = 5.1e-36
Identity = 81/203 (39.90%), Postives = 118/203 (58.13%), Query Frame = 0


Query: 144 KRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDE 203
           KR+GG GG  K+C +SPELQ   G  EL RTE+VK LW YI++NNLQDP++KR IIC++ 
Sbjct: 257 KRKGG-GGFAKVCSLSPELQAFTGVTELARTEVVKLLWKYIKENNLQDPNDKRSIICDES 316

Query: 204 LRLVFETDCTDMFKMNKLLAKHIISLE-------PTKPSSSKKARVESE-----PAIAVK 263
            R +F  +  +MF+MNK L KHI  LE        +K   + K ++ES+           
Sbjct: 317 FRSLFPVESINMFQMNKQLTKHIWPLEDNAGESVSSKSPKNGKQKMESDGDSXXXXXXXX 376

Query: 264 AAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLEDPLNPMAVLCDAKL 323
                V   + +S+AL  F G     + +++V++R+WEYI  N L+DP +   V+CD KL
Sbjct: 377 XXXXEVLAPLPLSDALVKFLGDGENSLSRADVVKRLWEYINHNDLQDPSDKRRVICDEKL 436

Query: 324 QELFGCESISALGIPEVLGRHHI 335
           +ELF  +S     + ++L  H I
Sbjct: 437 KELFEVDSFEDTSVSKLLTNHFI 458

[Close]

BLAST of Carg22386 vs. TAIR10
Match: AT1G49520.1 (SWIB complex BAF60b domain-containing protein)

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-21
Identity = 45/88 (51.14%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 142 KTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICN 201
           K K+RG  GG NK+C +SP+L+  +G  +L RTE+VK++WAYIR+++LQDP+N+R I+C+
Sbjct: 94  KAKKRG--GGFNKICQLSPQLEKFLGTSQLARTEVVKKMWAYIREHDLQDPTNRRNILCD 153

Query: 202 DELRLVFETDCTDMFKMNKLLAKHIISL 230
           + L  +F     +MF+MNK LAKHI +L
Sbjct: 154 ESLHSLFRVKTINMFQMNKALAKHIWAL 179

[Close]

BLAST of Carg22386 vs. TAIR10
Match: AT4G34290.1 (SWIB/MDM2 domain superfamily protein)

HSP 1 Score: 75.1 bits (183), Expect = 9.3e-14
Identity = 33/80 (41.25%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 149 PGGLNKLCGVSPELQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVF 208
           P G+ K   VS  +Q +VG PE+PRT+ +K++WAYI++++LQDP NKR I+C+++L+ +F
Sbjct: 65  PRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIF 124

Query: 209 E-TDCTDMFKMNKLLAKHII 228
           E  +     ++ KL+  H +
Sbjct: 125 EGKERVGFLEIAKLIGPHFL 144

[Close]

BLAST of Carg22386 vs. TAIR10
Match: AT2G35605.1 (SWIB/MDM2 domain superfamily protein)

HSP 1 Score: 73.6 bits (179), Expect = 2.7e-13
Identity = 37/89 (41.57%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 138 STQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRK 197
           ST  KT R+G   G+ K+  VS  L   +G+ E+ RT  VK++W YI+ NNLQ+P NKR+
Sbjct: 18  STGAKTGRQG--TGILKVVPVSKPLANFIGENEVSRTTAVKKIWEYIKLNNLQNPVNKRE 77

Query: 198 IICNDELRLVFE-TDCTDMFKMNKLLAKH 226
           I+C+++L+ +F   D     +++KLL++H
Sbjct: 78  ILCDEQLKTIFSGKDTVGFLEISKLLSQH 104

[Close]

BLAST of Carg22386 vs. Swiss-Prot
Match: sp|Q08747|UAF30_YEAST (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.3e-12
Identity = 38/96 (39.58%), Postives = 68/96 (70.83%), Query Frame = 0


Query: 158 VSPELQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFK 217
           +S  L +++G+ EL RTE+V++LWAYI+ +NLQ+P+NK++I+C+++L L+     T+MF+
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILGKS-TNMFE 185

Query: 218 MNKLLAKHIISLEPTK----PSSSKKARVESEPAIA 250
           M+K+LA H+   EP K    P   ++ R + +P ++
Sbjct: 186 MHKILASHM--TEPKKISDCPPLIQEVRRKEKPIVS 218

[Close]

BLAST of Carg22386 vs. Swiss-Prot
Match: sp|Q05024|TRI1_YEAST (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.7e-12
Identity = 36/95 (37.89%), Postives = 62/95 (65.26%), Query Frame = 0


Query: 158 VSPELQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFK 217
           +S  LQ  +G  ELPRT++VK +W YI++++LQ+P ++R+I+C++++  +F    T MF 
Sbjct: 126 LSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKKMT-MFS 185

Query: 218 MNKLLAKHIIS-------LEPTKPSSSKKARVESE 246
           MNKLL KH+ +        E  K +  K+ ++E+E
Sbjct: 186 MNKLLTKHLFNPDEIVKHEEEQKQTPEKEIKLENE 219

[Close]

BLAST of Carg22386 vs. Swiss-Prot
Match: sp|O74503|UAF30_SCHPO (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-09
Identity = 29/57 (50.88%), Postives = 42/57 (73.68%), Query Frame = 0


Query: 166 VGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLL 223
           +G  +L R + VK+LW YI+ ++LQDP++KR I+C+D+L+ VFE D   MF MNK L
Sbjct: 131 LGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTILCDDKLKSVFEVDTLHMFTMNKYL 187

[Close]

BLAST of Carg22386 vs. TrEMBL
Match: tr|A0A0A0LEG4|A0A0A0LEG4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 1.8e-152
Identity = 296/343 (86.30%), Postives = 313/343 (91.25%), Query Frame = 0


Query: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60
           MV+DQELS+A+QCLLRDSASP+NPNPFSSLNAVV ELQ+KLGLDLSHK+DFIHAQIQ IL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQ-----QPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQP 120
           RSHPQ           XXXXXXXXXXXXX       HQSPNF SAPSPTSSAFHTF+AQP
Sbjct: 61  RSHPQXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120

Query: 121 PPAKPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTE 180
           PPAKP++  AP T  GSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQ IVGQPELPRTE
Sbjct: 121 PPAKPDSVVAP-TVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANH 300
           SSKKARVE+E A++VK+AEPS+CPSVIISEALA+FFGVDGREMLQSEVLRRIWEYI+ NH
Sbjct: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300

Query: 301 LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 339
           LEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342

[Close]

BLAST of Carg22386 vs. TrEMBL
Match: tr|A0A1S3BI07|A0A1S3BI07_CUCME (uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490111 PE=4 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 5.7e-151
Identity = 295/344 (85.76%), Postives = 311/344 (90.41%), Query Frame = 0


Query: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60
           MV+DQELS+A+QCLLRDSASP+NPNPFSSLNAVV ELQ+KLGLDLSHK+DFIHAQIQ IL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQ------QPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQ 120
           RSHPQ            XXXXXXXXXXXXX       HQSPNF SAPSPTSSAFHTFTAQ
Sbjct: 61  RSHPQXXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120

Query: 121 PPPAKPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRT 180
           PP AK ++  AP T  GSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQ IVGQPELPRT
Sbjct: 121 PPTAKADSVVAP-TVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRT 180

Query: 181 EIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKP 240
           EIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKP
Sbjct: 181 EIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKP 240

Query: 241 SSSKKARVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRAN 300
           SSSKKARVE+E A++VK+AEPS+CPSVIISEALA+FFGVDGREMLQSEVLRRIWEYI+ N
Sbjct: 241 SSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVN 300

Query: 301 HLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 339
           HLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 HLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Carg22386 vs. TrEMBL
Match: tr|A0A1S4DX10|A0A1S4DX10_CUCME (box A-binding factor isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490111 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 8.9e-128
Identity = 258/306 (84.31%), Postives = 273/306 (89.22%), Query Frame = 0


Query: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60
           MV+DQELS+A+QCLLRDSASP+NPNPFSSLNAVV ELQ+KLGLDLSHK+DFIHAQIQ IL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQ------QPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQ 120
           RSHPQ            XXXXXXXXXXXXX       HQSPNF SAPSPTSSAFHTFTAQ
Sbjct: 61  RSHPQXXXXXXXXXXXXXXXXXXXXXXXXXQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120

Query: 121 PPPAKPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRT 180
           PP AK ++  AP T  GSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQ IVGQPELPRT
Sbjct: 121 PPTAKADSVVAP-TVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRT 180

Query: 181 EIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKP 240
           EIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKP
Sbjct: 181 EIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKP 240

Query: 241 SSSKKARVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRAN 300
           SSSKKARVE+E A++VK+AEPS+CPSVIISEALA+FFGVDGREMLQSEVLRRIWEYI+ N
Sbjct: 241 SSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVN 300

[Close]

BLAST of Carg22386 vs. TrEMBL
Match: tr|M5WHH4|M5WHH4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G228000 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.1e-104
Identity = 240/353 (67.99%), Postives = 274/353 (77.62%), Query Frame = 0


Query: 1   MVSDQELSEALQCLLRDSASPSNPN----PFSSLNAVVLELQSKLGLDLSHKVDFIHAQI 60
           MV++QE+S+ALQ L+ D+   SNPN     F++LN VV +L+S+LGLDLSHK DFI  QI
Sbjct: 1   MVTEQEISQALQALIHDTT--SNPNTTTPTFTTLNDVVQQLESRLGLDLSHKTDFIRTQI 60

Query: 61  QLILRSHPQQPQIHQXXXXXXXXXXXXXXXXXXXXHQSPNF-----PSAPSPTSSAFHTF 120
               RSHP  P    XXXXXXXXXXXXXXXXXXXX    +F     P+   PT SAF TF
Sbjct: 61  HYFFRSHP--PXXXXXXXXXXXXXXXXXXXXXXXXXPKDHFALNQPPNYHHPTPSAFQTF 120

Query: 121 TAQPPP--AKPET-AAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQ 180
           ++QPPP   KPE  +AAP +  GS+ PK+S + K KR+GGPGGLNKLCGVSPELQ IVG 
Sbjct: 121 SSQPPPPLLKPEPGSAAPVSVSGSNTPKDSAKPKAKRKGGPGGLNKLCGVSPELQVIVGH 180

Query: 181 PELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIS 240
           P LPRTEIVKQLWAYIRKNNLQDP NKRKIICN+ELRLVFETDCTDMFKMNKLLAKHII+
Sbjct: 181 PTLPRTEIVKQLWAYIRKNNLQDPGNKRKIICNEELRLVFETDCTDMFKMNKLLAKHIIA 240

Query: 241 LEPTKPSSSKKARVESEPAIAV----KAAEPSVCPSVIISEALASFFGVDGREMLQSEVL 300
           LEP+K S  KK +V   P +AV    K+ EP   PS+IISEALA+FFGV  REMLQSEVL
Sbjct: 241 LEPSKQSVPKKPKV---PKVAVESRTKSTEPG--PSLIISEALANFFGVGAREMLQSEVL 300

Query: 301 RRIWEYIRANHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRR 338
            RIWEYI+ NHLEDP NPMA+ CDAKLQE+FGCESISAL IP++L RHHIFRR
Sbjct: 301 MRIWEYIKVNHLEDPQNPMAIQCDAKLQEIFGCESISALEIPDILERHHIFRR 344

[Close]

BLAST of Carg22386 vs. TrEMBL
Match: tr|I1KYE8|I1KYE8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100801960 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.5e-103
Identity = 218/351 (62.11%), Postives = 251/351 (71.51%), Query Frame = 0


Query: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60
           MV+++E+SEA+Q LLR+    SNP+ F++LN VV ELQ+KLG DL+HK+DFI AQI L+ 
Sbjct: 1   MVTEEEISEAVQSLLRE----SNPSRFTTLNQVVEELQAKLGHDLTHKIDFITAQINLLF 60

Query: 61  --RSHPQQP--QIHQXXXXXXXXXXXXXXXXXXXXHQSPNFPSAPSPTSSAFHTFTAQPP 120
             R  PQ P  Q+ Q                      +PNF SAP         F++   
Sbjct: 61  GSRQPPQNPHRQLQQPKDHFAPP-------------PNPNFHSAPVSVGFQLQNFSSSNA 120

Query: 121 PAKPETAA---------APSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVG 180
                TAA         AP    G+  PKESTQTK KRRGGPGGL K+CGVSPELQ IVG
Sbjct: 121 VVAAATAADASRIEAPSAPVVVEGNQVPKESTQTKVKRRGGPGGLTKICGVSPELQVIVG 180

Query: 181 QPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII 240
           QP L RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELR+VFETDCTDMFKMNKLL+KHII
Sbjct: 181 QPALSRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLSKHII 240

Query: 241 SLEPTKPSSSKKARVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRI 300
            LEPTK    KK +V+ E     ++AEP+  PSVIIS+ALA+FFG+ GREMLQSEVLRRI
Sbjct: 241 PLEPTKKPVPKKQKVDVES--GTRSAEPT--PSVIISDALANFFGITGREMLQSEVLRRI 300

Query: 301 WEYIRANHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 339
           WEYI+ N LEDP NPMA++CD KLQE+FGCESISALGIPEVLGRHHIFR S
Sbjct: 301 WEYIKVNQLEDPANPMAIVCDGKLQEIFGCESISALGIPEVLGRHHIFRSS 330

The following BLAST results are available for this feature:

BLAST of Carg22386 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941247.1	4.7e-173	100.00	uncharacterized protein LOC111446611 [Cucurbita moschata]	[more]
XP_023525496.1	6.2e-173	99.70	uncharacterized protein LOC111789084 [Cucurbita pepo subsp. pepo]	[more]
XP_022981538.1	3.1e-172	99.41	uncharacterized protein LOC111480626 [Cucurbita maxima]	[more]
XP_004150254.1	2.7e-152	86.30	PREDICTED: angiomotin [Cucumis sativus] >KGN59077.1 hypothetical protein Csa_3G7...	[more]
XP_008447697.1	8.7e-151	85.76	PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >XP_00...	[more]

BLAST of Carg22386 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22360.1	8.5e-76	48.97	SWIB complex BAF60b domain-containing protein	[more]
AT3G19080.1	5.1e-36	39.90	SWIB complex BAF60b domain-containing protein	[more]
AT1G49520.1	1.6e-21	51.14	SWIB complex BAF60b domain-containing protein	[more]
AT4G34290.1	9.3e-14	41.25	SWIB/MDM2 domain superfamily protein	[more]
AT2G35605.1	2.7e-13	41.57	SWIB/MDM2 domain superfamily protein	[more]

BLAST of Carg22386 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q08747\|UAF30_YEAST	1.3e-12	39.58	Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATC...	[more]
sp\|Q05024\|TRI1_YEAST	3.7e-12	37.89	Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]
sp\|O74503\|UAF30_SCHPO	1.0e-09	50.88	Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 97...	[more]

BLAST of Carg22386 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LEG4\|A0A0A0LEG4_CUCSA	1.8e-152	86.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1	[more]
tr\|A0A1S3BI07\|A0A1S3BI07_CUCME	5.7e-151	85.76	uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S4DX10\|A0A1S4DX10_CUCME	8.9e-128	84.31	box A-binding factor isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490111 PE=4 SV=...	[more]
tr\|M5WHH4\|M5WHH4_PRUPE	3.1e-104	67.99	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G228000 PE=4 SV=1	[more]
tr\|I1KYE8\|I1KYE8_SOYBN	1.5e-103	62.11	Uncharacterized protein OS=Glycine max OX=3847 GN=100801960 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036885	SWIB_MDM2_dom_sf
IPR003121	SWIB_MDM2_domain
IPR019835	SWIB_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22386-RA	Carg22386-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 152..231 e-value: 2.5E-43 score: 160.0 coord: 257..338 e-value: 2.2E-9 score: 47.2
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 262..332 e-value: 7.1E-18 score: 64.2 coord: 155..226 e-value: 5.6E-28 score: 96.5
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	G3DSA:1.10.245.10		coord: 147..237 e-value: 6.2E-30 score: 105.0 coord: 255..337 e-value: 1.2E-19 score: 72.0
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	SSF47592	SWIB/MDM2 domain	coord: 259..333
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	SSF47592	SWIB/MDM2 domain	coord: 145..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..83
None	No IPR available	PANTHER	PTHR13844:SF10	SUBFAMILY NOT NAMED	coord: 1..89
None	No IPR available	PANTHER	PTHR13844	BRG-1 ASSOCIATED FACTOR 60 BAF60	coord: 1..89
None	No IPR available	PANTHER	PTHR13844:SF10	SUBFAMILY NOT NAMED	coord: 117..335
None	No IPR available	PANTHER	PTHR13844	BRG-1 ASSOCIATED FACTOR 60 BAF60	coord: 117..335

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22386	Cla003271	Watermelon (97103) v1	carwmB0886
Carg22386	Csa3G758990	Cucumber (Chinese Long) v2	carcuB0897
Carg22386	MELO3C013104	Melon (DHL92) v3.5.1	carmeB0872
Carg22386	ClCG09G020920	Watermelon (Charleston Gray)	carwcgB0859
Carg22386	CSPI03G34350	Wild cucumber (PI 183967)	carcpiB0917
Carg22386	Cucsa.281620	Cucumber (Gy14) v1	carcgyB1004
Carg22386	CmaCh01G011040	Cucurbita maxima (Rimu)	carcmaB1224
Carg22386	CmoCh01G011500	Cucurbita moschata (Rifu)	carcmoB1194
Carg22386	Lsi02G018680	Bottle gourd (USVL1VR-Ls)	carlsiB802
Carg22386	Cp4.1LG02g00820	Cucurbita pepo (Zucchini)	carcpeB1232
Carg22386	CsGy7G008480	Cucumber (Gy14) v2	carcgybB0873
Carg22386	MELO3C013104.2	Melon (DHL92) v3.6.1	carmedB0880
Carg22386	CsaV3_7G018820	Cucumber (Chinese Long) v3	carcucB0924
Carg22386	Cla97C09G182350	Watermelon (97103) v2	carwmbB0922
Carg22386	Bhi09G001434	Wax gourd	carwgoB1030

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22386	Silver-seed gourd	carcarB638
Carg22386	Cucurbita maxima (Rimu)	carcmaB1223
Carg22386	Cucurbita moschata (Rifu)	carcmoB1193
Carg22386	Cucurbita pepo (Zucchini)	carcpeB1233
Carg22386	Wild cucumber (PI 183967)	carcpiB0920
Carg22386	Cucumber (Chinese Long) v2	carcuB0898
Carg22386	Cucumber (Chinese Long) v2	carcuB0900