Cucsa.258440 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCCATCATTGCTTGGCGGAGTTCATTACTTTACCCCACACATTCACGTCTCACTCCTAATCTCTTCTCTATTTCCTGACGCAATTTCATCCTTATCGTCACCTCGCCGTCGTTCCTGGCAATTTCCGGTCGCGTATTATCTTTTCTGGTACGTTTCTTCTTTCAACCCTTGATTGATTCTTTTCTGTGTGTCTTGTTCCGTTCAGAACTTGTGTTGGGGATTCTTAATTTTTACCTATTTCATGGACGATCCGCTCTTTTTAGTTGTTTAGATCGGTGGCGATCTTTGTTGTTGCTTATTGGTACGGTGTGTTAGATCCGTTTCTTGTTTGATCTCGAATTATTGAATGGATGATTGTACGACCTAGAAATGATTGCGTGTATGTATGTGCTGGGTCGGTAATTTGTATCTTTGTAGGTCTAGCTTCTATTGATTAGATTGAATTGTGTTTTCTCGTTGTAAATTTGAGTGATAATCGGGATGTGTTCATTACTTGTCGAGATGTGGCGGGAGGGAGTTGTCTTGTTGATCGCACGATTTATTGCTCAGTTTCATATTGTTGAACTTGCATCTGGGTTTTTTTTTTCCAATCTTCTCTCTTATTTCTAATCGAGCTGTTAAGATATGTTTTCCTTCCCCAGAGTTCGGTGAGGTTGGAATACACAAGGATTCTCCTAGAATGGCAGATAAGGATGGAGAAGAGAATAACTCTCGTGGAAACGAATGGGAAGTCGTTTCACTCACTGCATCGGCGTATGAAGCTGCTCCAAATGTGAAGGAAGATGAGTCGCTTGATGAAAATAACAGCAATTTGTACGAAGCAGAAACTTCTCGTGCTCTTTTTATGTCCAGGCACTTTGTATTTCCACCGAGTCAGCACGAGAATTTGCCATTGGAACCTGATAAGAGTGAGATTCATGACGATCAAGGAGGGAAGGAGAATGTGGAATCTGATTCTGCTGTTATAGATGGCGGAAAATCTAGTAGAAAAAATGAAGATAGTTTGAATTTGGAAGGGTTGGTTGAGACAGATGAGTTTACAGGGATTGGTAAAACTATGGAGAAAGGTAGCAAGCTGTCTTTTCATGGTGATGATTTTAGTGAAAATACAGCCCTACCAGATTTGAATCTGGTTGACAAGGAGTTGGATCCCTTCAGTGCTCCTACCTATAGTTCTTTTCATGGTGAAACGGATCTTAGTTCCACAACCTTTGATGAAATCCCTCCATTGGAATCTAATGATCAAGTCTCAAGTCCAGAAAGCTTAGAAACTCCCAAGCTTGATAACAAAAGCAATAAGTCCAGTCTTCCTTGTGGTGCGTGGTGGAAGAGAAGAGCTGCTAATTTATACTCTCATGCGAAAGAAGCAAAGGCATTTTGGTCCATTTTCATTGCAGCTGCTGTTATGGGACTTGTAATACTTGGGCAACGCTGGCAGCAGGAAAGTTGGCAAACTCTGCAACTGAAGTGGCACATTAGTGTGAATGATCAGGTATGTTGATTACTGTTGCTTTTATTCGATGGAGTTTTGTTTATTGTTTAGCTCTTCGCAATCATGTGTATACATCTCTTCTGTTATGTACTTTGAATTTTGAGTTCCAGATTCAGTCTCTATAAGAGATAAGAATAGGGAATTTAAATTCAATTTTATCAGGAGTCATGGTGCAGTGACAACTAGGATCTTAAAATAGTACACATGTGGATGTTGAGTGAAATTACTTTACTTGTGTATTTTTATTTACTTCTGTCATCCAAATTGGAGATTAAATTCTGAGATTTCCTGCATACCCTGCTAGTTTATTATTTATTTGAAATGCATCTGGTGCTTTGGGTTGATGTTCAAATAACTGCTAGCGCTAGGTTTTAATTTTAAAAGCAGAGACAATATAAATGAGCTTGTGTTGTTGGCAGAAATTCAGGGACCTTCCAACTAGGAAACCAGTTTTGTTGAATACAAACTGATCCAATAGCTAATTCCAGTTCTGATTAGGGGAACTCATCATATGGTTATAAAGCCAATGTTTATATCTTTTACTCCCACCCCACTATTTTCTAAGCCTCATCTTTTCGGTAGTTGAGGTCATATACGGAGAAATCTAGGTCAAAAGTTTCTAGGTTTTAGTTTAGTCTTTTGGAGAATTTAAAACTGATGTATTCATAATTGTAGCTATCAGTTCTGTTTCAATTCATCATTTTCAAGTGGTGCTTGTTAAAATTTTGATGGTAGTCTGCTTCTTGGCTTCTTGACTTGGCAACTACATATAGATCGTGCTGATGGCACATTCATTCACTAGTTGCTTCCATCATTCTCTTGTGTTCGTGGCAGTGCAATAATATTTTCGTTTCAAAGCTACTTAGTTGCTAACTGCAAAGCGGTATCATTTGCAAATTGCAATTGCAACTGTTACATGCATCATGATTAGAAGATAGGTTTGCTTCCCTTTTCATGTTGCTATTGTATGGTCTAATTGTCATTGTACTGCTACTATTGCAGAAGACAAACCGAGTTCTGGGACCAATAACTAGGCTTAAAGACGTGATCGTGGGTGGCCAACGCCGCGGTTCATCCATCAAGTTTAGCCCCAATGAGTTATAAGATGATGACGATAAATGTAGCAAAGGAAGAAACAGCATGAAAGGAAGAGGTTTCTAAGTTAAATGCCTGAGCGTCTATGGCCGTCTTTCAAAATCTACACAAGTACTTTGGGGAACATGTTGAAGTTTGATTGTTTAAGTTATATCTTTTATCTTGGTGGTATAGTACCATATTGCATTGTACATTAACTTAATCAATTGGGTGGAATGTAAGTTACAAAGGTCATACATACCTATATTCCCAAGGGACTCATTTTATTTCGACTTCGTCGAGAATGGCCTGTCAAATCAGATTGAATGACACGTTTCTAGCTCACTGCTCAAGATCATCTTGTTCATTTGTTTGCTTGTAATAGTTTAGCTGAAATATAATGCCAACCGATTCAACTGTTCTAATCAAAATTGGTTTTGGTGGTTTGAATTCTAGAGTTGTCAAGAAACAGGAAGTTGATTGGTTACTTTTATTAAATAGTTGGCTGGG TTTCCATCATTGCTTGGCGGAGTTCATTACTTTACCCCACACATTCACGTCTCACTCCTAATCTCTTCTCTATTTCCTGACGCAATTTCATCCTTATCGTCACCTCGCCGTCGTTCCTGGCAATTTCCGGTCGCGTATTATCTTTTCTGAGTTCGGTGAGGTTGGAATACACAAGGATTCTCCTAGAATGGCAGATAAGGATGGAGAAGAGAATAACTCTCGTGGAAACGAATGGGAAGTCGTTTCACTCACTGCATCGGCGTATGAAGCTGCTCCAAATGTGAAGGAAGATGAGTCGCTTGATGAAAATAACAGCAATTTGTACGAAGCAGAAACTTCTCGTGCTCTTTTTATGTCCAGGCACTTTGTATTTCCACCGAGTCAGCACGAGAATTTGCCATTGGAACCTGATAAGAGTGAGATTCATGACGATCAAGGAGGGAAGGAGAATGTGGAATCTGATTCTGCTGTTATAGATGGCGGAAAATCTAGTAGAAAAAATGAAGATAGTTTGAATTTGGAAGGGTTGGTTGAGACAGATGAGTTTACAGGGATTGGTAAAACTATGGAGAAAGGTAGCAAGCTGTCTTTTCATGGTGATGATTTTAGTGAAAATACAGCCCTACCAGATTTGAATCTGGTTGACAAGGAGTTGGATCCCTTCAGTGCTCCTACCTATAGTTCTTTTCATGGTGAAACGGATCTTAGTTCCACAACCTTTGATGAAATCCCTCCATTGGAATCTAATGATCAAGTCTCAAGTCCAGAAAGCTTAGAAACTCCCAAGCTTGATAACAAAAGCAATAAGTCCAGTCTTCCTTGTGGTGCGTGGTGGAAGAGAAGAGCTGCTAATTTATACTCTCATGCGAAAGAAGCAAAGGCATTTTGGTCCATTTTCATTGCAGCTGCTGTTATGGGACTTGTAATACTTGGGCAACGCTGGCAGCAGGAAAGTTGGCAAACTCTGCAACTGAAGTGGCACATTAGTGTGAATGATCAGACAAACCGAGTTCTGGGACCAATAACTAGGCTTAAAGACGTGATCGTGGGTGGCCAACGCCGCGGTTCATCCATCAAGTTTAGCCCCAATGAGTTATAAGATGATGACGATAAATGTAGCAAAGGAAGAAACAGCATGAAAGGAAGAGGTTTCTAAGTTAAATGCCTGAGCGTCTATGGCCGTCTTTCAAAATCTACACAAGTACTTTGGGGAACATGTTGAAGTTTGATTGTTTAAGTTATATCTTTTATCTTGGTGGTATAGTACCATATTGCATTGTACATTAACTTAATCAATTGGGTGGAATGTAAGTTACAAAGGTCATACATACCTATATTCCCAAGGGACTCATTTTATTTCGACTTCGTCGAGAATGGCCTGTCAAATCAGATTGAATGACACGTTTCTAGCTCACTGCTCAAGATCATCTTGTTCATTTGTTTGCTTGTAATAGTTTAGCTGAAATATAATGCCAACCGATTCAACTGTTCTAATCAAAATTGGTTTTGGTGGTTTGAATTCTAGAGTTGTCAAGAAACAGGAAGTTGATTGGTTACTTTTATTAAATAGTTGGCTGGG ATGGCAGATAAGGATGGAGAAGAGAATAACTCTCGTGGAAACGAATGGGAAGTCGTTTCACTCACTGCATCGGCGTATGAAGCTGCTCCAAATGTGAAGGAAGATGAGTCGCTTGATGAAAATAACAGCAATTTGTACGAAGCAGAAACTTCTCGTGCTCTTTTTATGTCCAGGCACTTTGTATTTCCACCGAGTCAGCACGAGAATTTGCCATTGGAACCTGATAAGAGTGAGATTCATGACGATCAAGGAGGGAAGGAGAATGTGGAATCTGATTCTGCTGTTATAGATGGCGGAAAATCTAGTAGAAAAAATGAAGATAGTTTGAATTTGGAAGGGTTGGTTGAGACAGATGAGTTTACAGGGATTGGTAAAACTATGGAGAAAGGTAGCAAGCTGTCTTTTCATGGTGATGATTTTAGTGAAAATACAGCCCTACCAGATTTGAATCTGGTTGACAAGGAGTTGGATCCCTTCAGTGCTCCTACCTATAGTTCTTTTCATGGTGAAACGGATCTTAGTTCCACAACCTTTGATGAAATCCCTCCATTGGAATCTAATGATCAAGTCTCAAGTCCAGAAAGCTTAGAAACTCCCAAGCTTGATAACAAAAGCAATAAGTCCAGTCTTCCTTGTGGTGCGTGGTGGAAGAGAAGAGCTGCTAATTTATACTCTCATGCGAAAGAAGCAAAGGCATTTTGGTCCATTTTCATTGCAGCTGCTGTTATGGGACTTGTAATACTTGGGCAACGCTGGCAGCAGGAAAGTTGGCAAACTCTGCAACTGAAGTGGCACATTAGTGTGAATGATCAGACAAACCGAGTTCTGGGACCAATAACTAGGCTTAAAGACGTGATCGTGGGTGGCCAACGCCGCGGTTCATCCATCAAGTTTAGCCCCAATGAGTTATAA MADKDGEENNSRGNEWEVVSLTASAYEAAPNVKEDESLDENNSNLYEAETSRALFMSRHFVFPPSQHENLPLEPDKSEIHDDQGGKENVESDSAVIDGGKSSRKNEDSLNLEGLVETDEFTGIGKTMEKGSKLSFHGDDFSENTALPDLNLVDKELDPFSAPTYSSFHGETDLSSTTFDEIPPLESNDQVSSPESLETPKLDNKSNKSSLPCGAWWKRRAANLYSHAKEAKAFWSIFIAAAVMGLVILGQRWQQESWQTLQLKWHISVNDQTNRVLGPITRLKDVIVGGQRRGSSIKFSPNEL*
BLAST of Cucsa.258440 vs. Swiss-Prot
Match: ATI1_ARATH (ATG8-interacting protein 1 OS=Arabidopsis thaliana GN=ATI1 PE=1 SV=2) HSP 1 Score: 191.0 bits (484), Expect = 1.9e-47 Identity = 125/301 (41.53%), Postives = 157/301 (52.16%), Query Frame = 1
BLAST of Cucsa.258440 vs. Swiss-Prot
Match: ATI2_ARATH (ATG8-interacting protein 2 OS=Arabidopsis thaliana GN=ATI2 PE=1 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.0e-45 Identity = 124/307 (40.39%), Postives = 164/307 (53.42%), Query Frame = 1
BLAST of Cucsa.258440 vs. TrEMBL
Match: A0A0A0L483_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122320 PE=4 SV=1) HSP 1 Score: 617.1 bits (1590), Expect = 1.2e-173 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 1
BLAST of Cucsa.258440 vs. TrEMBL
Match: F6I642_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02370 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 6.4e-87 Identity = 182/314 (57.96%), Postives = 215/314 (68.47%), Query Frame = 1
BLAST of Cucsa.258440 vs. TrEMBL
Match: A0A067HE72_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020645mg PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 8.0e-82 Identity = 166/311 (53.38%), Postives = 211/311 (67.85%), Query Frame = 1
BLAST of Cucsa.258440 vs. TrEMBL
Match: V4TD71_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021244mg PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 8.0e-82 Identity = 166/311 (53.38%), Postives = 211/311 (67.85%), Query Frame = 1
BLAST of Cucsa.258440 vs. TrEMBL
Match: A0A067H5P1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020645mg PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 8.0e-82 Identity = 166/311 (53.38%), Postives = 211/311 (67.85%), Query Frame = 1
BLAST of Cucsa.258440 vs. TAIR10
Match: AT2G45980.1 (AT2G45980.1 unknown protein) HSP 1 Score: 191.0 bits (484), Expect = 1.0e-48 Identity = 125/301 (41.53%), Postives = 157/301 (52.16%), Query Frame = 1
BLAST of Cucsa.258440 vs. TAIR10
Match: AT4G00355.3 (AT4G00355.3 unknown protein) HSP 1 Score: 185.3 bits (469), Expect = 5.7e-47 Identity = 124/307 (40.39%), Postives = 164/307 (53.42%), Query Frame = 1
BLAST of Cucsa.258440 vs. TAIR10
Match: AT4G10080.1 (AT4G10080.1 unknown protein) HSP 1 Score: 48.5 bits (114), Expect = 8.4e-06 Identity = 25/78 (32.05%), Postives = 40/78 (51.28%), Query Frame = 1
HSP 2 Score: 29.3 bits (64), Expect = 5.3e+00 Identity = 20/57 (35.09%), Postives = 27/57 (47.37%), Query Frame = 1
BLAST of Cucsa.258440 vs. NCBI nr
Match: gi|778677194|ref|XP_011650748.1| (PREDICTED: uncharacterized protein LOC101221896 [Cucumis sativus]) HSP 1 Score: 617.1 bits (1590), Expect = 1.7e-173 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 1
BLAST of Cucsa.258440 vs. NCBI nr
Match: gi|659075230|ref|XP_008438034.1| (PREDICTED: uncharacterized protein LOC103483267 [Cucumis melo]) HSP 1 Score: 600.9 bits (1548), Expect = 1.2e-168 Identity = 294/304 (96.71%), Postives = 299/304 (98.36%), Query Frame = 1
BLAST of Cucsa.258440 vs. NCBI nr
Match: gi|1009162951|ref|XP_015899708.1| (PREDICTED: ATG8-interacting protein 1 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 335.9 bits (860), Expect = 7.5e-89 Identity = 180/306 (58.82%), Postives = 220/306 (71.90%), Query Frame = 1
BLAST of Cucsa.258440 vs. NCBI nr
Match: gi|359489625|ref|XP_002275132.2| (PREDICTED: uncharacterized protein LOC100244782 [Vitis vinifera]) HSP 1 Score: 328.9 bits (842), Expect = 9.1e-87 Identity = 182/314 (57.96%), Postives = 215/314 (68.47%), Query Frame = 1
BLAST of Cucsa.258440 vs. NCBI nr
Match: gi|641867521|gb|KDO86205.1| (hypothetical protein CISIN_1g020645mg [Citrus sinensis]) HSP 1 Score: 312.0 bits (798), Expect = 1.2e-81 Identity = 166/311 (53.38%), Postives = 211/311 (67.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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