CmoCh14G021080 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGTTACGCTATCAGTTTTGTAAATCTATTGTCACCGGTAACCACCGGTTTCCATCATTGCTTGGCGGGGATTATTACTTTACCCCCACATGTTCATGTCCCAGTCCTAATCCCTTCTCCATTTCCCGAGCCAAGTTTCATCCTTATCGTTACGTCGACGCAGTCTCCGGTCGCCGCTGTCTTTCATCTTCTATCGCTCGGTTCGTCTCTTCTTCTACTGTTCTCTGCAACTCTTGATTGATTCTTTTTTGTTTTCTCGTTCGGTCGAGAAGTCGTGTCGGTAATTCTTAATATATATTTTTTAATATGTTCGGTCTAGTGGTTTTGATTGGAGTTGTTGCCTATTGGTAGGGTGTTAGATCCGTTTGTTGTTTGATCTTGCATACTTGAATGGATGAATATACGACCTAGATTTATGATTGTGTGTATGTATGTTCTAGATTGGTAATTTATATCTTTGTAGGCCTAATTTCTCTTGATTAGATTGAATTGTGGAATCGCGTTGTAAATTAGAGTGTTAAGCGGGATGTGTCGATCACTTGTCGGATTGACGCAGCACGAGGGAGTTGTCTTCTAAATTTACGACTAATTCCTTAGTTCTAAATACCTCTAATTGTCGTACCGTTGAAATTGCGTCTGGAGTTGCGTTTTTTTCTTCCCTCTTCTTTTTAATTGAGCTGGTAAGATATGTTTTCCTTTGCCAGATTCTGTGAGGTTGGAATACACGAGAACTCCCTTAGAATGGCAGATAATGATGGAGAAGAGAATAACTCTCGTGGAAATGGATGGGAAGTTGTTTCACTCACTGCGTCGGCATATGAAGCTGCTCCTAATGTGAAGGAAAGCGAATCGACTGATGAAAATAAAAGCAATTTGTACGAAGCAGAAACTTCCCATGCTTTGTTTATGTCTAGGCACTTCGTATTTCCACCGAATCAGCACGAGAATTTGCCATTGGAACCTGATAAGAGTGAGATTCACGATGATCAAGGAGGGAAGGAGAATGTGGACTCTGATTCTACTGCTGTAGATGGCGGAAAATCAAGTAGAAAGAATGAAGATGTCTTGAATATAGAAAGGTTGGGTGAGACAGATGAGTTTTCAGGGATTGACAAAACTACGGAGAAAGGCGGCAAGCTGTCTTTTCATGGTGATGAATTTAGTGAAAATACAACGCTACCAGATTTGAATCTGGTTGACAAGGAGCAGGATCCCTTTGATGCTCCTACCTATAGTTCCTTTCATGGTGAAACCAATCTCAGTTCAATGACAAATGATGAAATCCCTCCATTGGAATCTAACGATCAAGTCTCGAATCCAGAAAGCTTGGAAACTCATACACTTGATAGTAAAAGCAACAAGTCCAATCTTCCTTGTGGCGCTTGGTGGAAGAGAAGAGCTGTTAATTTATACTCTCATGCAAAAGAAGCGAATGCATTTTGGTCCATTTTCGTTGCAGCAGCTGTTATGGGACTTGTAATACTTGGGCAGCGCTGGCAGCAGGAAAGTTGGCGGACTCTGCAACTGAAAGGGCACATTAGTGTGAACGATCAGGTATATTGATTATTGTTATTTCCGTTTGATGGCATTCTGTTTATCGTTCAGCTTCTTCGTTATTATTCTGTATGCATCTATTCTGTTATGTACTTCGAATTTTGAGTTCCAGATTTCAGTCTATAGAATAGATCTAAGAATAGGAAATTCAAGTTCAATCTCAACAAGAGCCATGGTGCTGACAACTAGGTTCTTAAAATAGCATCATGTGCATGTTGAGTGAAAATAGTTCTCTCTCTTATCTTTGTTTACATCTTTCATCCAAATTGGAGATTAAATTCTGAGATTTCCTACATACCCTGCTAGCTTATTATTCCTTTAAAGATGCATCTGTTGCTTTGACTCGATGTCGAACCGCTAGGCTTAAATTTTACGAGCAGAAACAATGCGAATAAGCTTGTTGTAGCCAGAAATTCGGGGACCTTCCAACAATGAAACCAGGTTTGTTGAGTACCAACAGATCCAAAAGCTGATTCCAGTTCTGATTAGGGGAACTCATTATATGGTTGTACGGCCAAATTTTTATCTTACCCACTATGTGTTCTAACTTCAAAGCCTCATCTTTGTAGCCATTGAGGAAATATATGGGGATTTTCATGTTGAAGTTTCTAGTTCTTAGTTTAGGCTGTTAGCGAATTGAAACTGATATGTTCATAGTGGTAGTTATCTGTTGCAAGTCACCATTTTTCAAGTGGCGTTAAAATTTTTGGGTTGGTCTGCTTATTGGCTTTTGGACTTGGCAACTACACACAAACCTTGCCATCAAGTACTCATTTATTAACAACTTGCTTCCATCATTCCCGTGTTCGTAGCAATGCAATGAATTGTCTGACTCAGCTTTTGAGATGGTAGTTTAAAACCTACTTGGTTGCTTGCAATTGCAACTGTTGGTTGTATCATGGCTATAGAAATGCACCCTCATGCCTATTTTAGAAGAGTTGTATGCTTCCTTCCTTTTCCACGTTGCCTTATTGCCTTAATTTCCATGATACTGTTACAATTTCAGAAGACAATCCGAGTGCTAGGACCAATAACTCGACTTAAAGACGTGATCGTGGGTGGCCAACGCCGTGGTTCGTCCATCAAGTTTAGCCCCAGTGAGTTATAA TGTTACGCTATCAGTTTTGTAAATCTATTGTCACCGGTAACCACCGGTTTCCATCATTGCTTGGCGGGGATTATTACTTTACCCCCACATGTTCATGTCCCAGTCCTAATCCCTTCTCCATTTCCCGAGCCAAGTTTCATCCTTATCGTTACGTCGACGCAGTCTCCGGTCGCCGCTGTCTTTCATCTTCTATCGCTCGATTCTGTGAGGTTGGAATACACGAGAACTCCCTTAGAATGGCAGATAATGATGGAGAAGAGAATAACTCTCGTGGAAATGGATGGGAAGTTGTTTCACTCACTGCGTCGGCATATGAAGCTGCTCCTAATGTGAAGGAAAGCGAATCGACTGATGAAAATAAAAGCAATTTGTACGAAGCAGAAACTTCCCATGCTTTGTTTATGTCTAGGCACTTCGTATTTCCACCGAATCAGCACGAGAATTTGCCATTGGAACCTGATAAGAGTGAGATTCACGATGATCAAGGAGGGAAGGAGAATGTGGACTCTGATTCTACTGCTGTAGATGGCGGAAAATCAAGTAGAAAGAATGAAGATGTCTTGAATATAGAAAGGTTGGGTGAGACAGATGAGTTTTCAGGGATTGACAAAACTACGGAGAAAGGCGGCAAGCTGTCTTTTCATGGTGATGAATTTAGTGAAAATACAACGCTACCAGATTTGAATCTGGTTGACAAGGAGCAGGATCCCTTTGATGCTCCTACCTATAGTTCCTTTCATGGTGAAACCAATCTCAGTTCAATGACAAATGATGAAATCCCTCCATTGGAATCTAACGATCAAGTCTCGAATCCAGAAAGCTTGGAAACTCATACACTTGATAGTAAAAGCAACAAGTCCAATCTTCCTTGTGGCGCTTGGTGGAAGAGAAGAGCTGTTAATTTATACTCTCATGCAAAAGAAGCGAATGCATTTTGGTCCATTTTCGTTGCAGCAGCTGTTATGGGACTTGTAATACTTGGGCAGCGCTGGCAGCAGGAAAGTTGGCGGACTCTGCAACTGAAAGGGCACATTAGTGTGAACGATCAGAAGACAATCCGAGTGCTAGGACCAATAACTCGACTTAAAGACGTGATCGTGGGTGGCCAACGCCGTGGTTCGTCCATCAAGTTTAGCCCCAGTGAGTTATAA ATGGCAGATAATGATGGAGAAGAGAATAACTCTCGTGGAAATGGATGGGAAGTTGTTTCACTCACTGCGTCGGCATATGAAGCTGCTCCTAATGTGAAGGAAAGCGAATCGACTGATGAAAATAAAAGCAATTTGTACGAAGCAGAAACTTCCCATGCTTTGTTTATGTCTAGGCACTTCGTATTTCCACCGAATCAGCACGAGAATTTGCCATTGGAACCTGATAAGAGTGAGATTCACGATGATCAAGGAGGGAAGGAGAATGTGGACTCTGATTCTACTGCTGTAGATGGCGGAAAATCAAGTAGAAAGAATGAAGATGTCTTGAATATAGAAAGGTTGGGTGAGACAGATGAGTTTTCAGGGATTGACAAAACTACGGAGAAAGGCGGCAAGCTGTCTTTTCATGGTGATGAATTTAGTGAAAATACAACGCTACCAGATTTGAATCTGGTTGACAAGGAGCAGGATCCCTTTGATGCTCCTACCTATAGTTCCTTTCATGGTGAAACCAATCTCAGTTCAATGACAAATGATGAAATCCCTCCATTGGAATCTAACGATCAAGTCTCGAATCCAGAAAGCTTGGAAACTCATACACTTGATAGTAAAAGCAACAAGTCCAATCTTCCTTGTGGCGCTTGGTGGAAGAGAAGAGCTGTTAATTTATACTCTCATGCAAAAGAAGCGAATGCATTTTGGTCCATTTTCGTTGCAGCAGCTGTTATGGGACTTGTAATACTTGGGCAGCGCTGGCAGCAGGAAAGTTGGCGGACTCTGCAACTGAAAGGGCACATTAGTGTGAACGATCAGAAGACAATCCGAGTGCTAGGACCAATAACTCGACTTAAAGACGTGATCGTGGGTGGCCAACGCCGTGGTTCGTCCATCAAGTTTAGCCCCAGTGAGTTATAA
BLAST of CmoCh14G021080 vs. Swiss-Prot
Match: ATI1_ARATH (ATG8-interacting protein 1 OS=Arabidopsis thaliana GN=ATI1 PE=1 SV=2) HSP 1 Score: 175.3 bits (443), Expect = 1.1e-42 Identity = 122/309 (39.48%), Postives = 164/309 (53.07%), Query Frame = 1
BLAST of CmoCh14G021080 vs. Swiss-Prot
Match: ATI2_ARATH (ATG8-interacting protein 2 OS=Arabidopsis thaliana GN=ATI2 PE=1 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 8.3e-40 Identity = 118/312 (37.82%), Postives = 163/312 (52.24%), Query Frame = 1
BLAST of CmoCh14G021080 vs. TrEMBL
Match: A0A0A0L483_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122320 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 2.7e-146 Identity = 266/304 (87.50%), Postives = 279/304 (91.78%), Query Frame = 1
BLAST of CmoCh14G021080 vs. TrEMBL
Match: F6I642_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02370 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 1.1e-78 Identity = 174/314 (55.41%), Postives = 206/314 (65.61%), Query Frame = 1
BLAST of CmoCh14G021080 vs. TrEMBL
Match: A0A067JXI8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14383 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 1.3e-76 Identity = 175/309 (56.63%), Postives = 211/309 (68.28%), Query Frame = 1
BLAST of CmoCh14G021080 vs. TrEMBL
Match: V7B4N2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G061700g PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 2.5e-75 Identity = 165/321 (51.40%), Postives = 207/321 (64.49%), Query Frame = 1
BLAST of CmoCh14G021080 vs. TrEMBL
Match: A0A067HE72_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020645mg PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 2.5e-75 Identity = 165/313 (52.72%), Postives = 210/313 (67.09%), Query Frame = 1
BLAST of CmoCh14G021080 vs. TAIR10
Match: AT2G45980.1 (AT2G45980.1 unknown protein) HSP 1 Score: 175.3 bits (443), Expect = 5.9e-44 Identity = 122/309 (39.48%), Postives = 164/309 (53.07%), Query Frame = 1
BLAST of CmoCh14G021080 vs. TAIR10
Match: AT4G00355.3 (AT4G00355.3 unknown protein) HSP 1 Score: 165.6 bits (418), Expect = 4.7e-41 Identity = 118/312 (37.82%), Postives = 163/312 (52.24%), Query Frame = 1
BLAST of CmoCh14G021080 vs. TAIR10
Match: AT4G10080.1 (AT4G10080.1 unknown protein) HSP 1 Score: 50.1 bits (118), Expect = 2.9e-06 Identity = 26/78 (33.33%), Postives = 40/78 (51.28%), Query Frame = 1
BLAST of CmoCh14G021080 vs. NCBI nr
Match: gi|778677194|ref|XP_011650748.1| (PREDICTED: uncharacterized protein LOC101221896 [Cucumis sativus]) HSP 1 Score: 526.2 bits (1354), Expect = 3.9e-146 Identity = 266/304 (87.50%), Postives = 279/304 (91.78%), Query Frame = 1
BLAST of CmoCh14G021080 vs. NCBI nr
Match: gi|659075230|ref|XP_008438034.1| (PREDICTED: uncharacterized protein LOC103483267 [Cucumis melo]) HSP 1 Score: 518.5 bits (1334), Expect = 8.1e-144 Identity = 261/304 (85.86%), Postives = 278/304 (91.45%), Query Frame = 1
BLAST of CmoCh14G021080 vs. NCBI nr
Match: gi|1009162951|ref|XP_015899708.1| (PREDICTED: ATG8-interacting protein 1 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 312.0 bits (798), Expect = 1.1e-81 Identity = 177/306 (57.84%), Postives = 219/306 (71.57%), Query Frame = 1
BLAST of CmoCh14G021080 vs. NCBI nr
Match: gi|359489625|ref|XP_002275132.2| (PREDICTED: uncharacterized protein LOC100244782 [Vitis vinifera]) HSP 1 Score: 301.6 bits (771), Expect = 1.6e-78 Identity = 174/314 (55.41%), Postives = 206/314 (65.61%), Query Frame = 1
BLAST of CmoCh14G021080 vs. NCBI nr
Match: gi|802695159|ref|XP_012083367.1| (PREDICTED: uncharacterized protein LOC105642968 [Jatropha curcas]) HSP 1 Score: 294.7 bits (753), Expect = 1.9e-76 Identity = 175/309 (56.63%), Postives = 211/309 (68.28%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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