Carg20994 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTTCTCCATTTCCCGAGCCAAGTTTCATCCTTATCGTTACGTCGACGCAGTCTCCGGTCGCCGCTGTCTTTCATCTTCTCTCGCTCGGTTCGTCTCTTCTTCTACTGTTCTCTGCAACTCTTGATTGATTCTTTCTGTTTTCTCGTTCGGTCGAGAAGTCGTGTCGGTAATTCTTAATATATTTTTTTTTTAATCTGTTCGGTTTAGTGGTTTTGATTGGAGTTGTTGCCTATTGGTAGGGTGTTAGATCCGTTTGTTGTTTGATCTTGCATACTTGAAAGGATGAATATACGACCTAGATTTATGATTGTGTGTATGTATGTTCTAGATTGGTAATTTATATCTTTGTAGGCCTAATTTGTCTTGATTAGATTGAATTGTGGAATCGCGTTGTAAATTAGAGTGCTAAGCGGGATGTGTCGATCACTCGTCGAATTGACGCGGCACGAGGGAGTTGTCTTCTAAATTTACGACTAATTCCTTAGTTCTAAATACCTCTAATTGTCGTACCGTTGAAATTGCGTCTGGAGTTGCGTTTTTTTCTTCCCTCTTCTTTTTAATTGAGCTGGTAAGATATGTTTTCCTTTGCCAGATTCTGTGAGGTTGGAATACACGAGAACTCCCTTAGAATGGCAGATAATGATGGAGAAGAGAATAACTCTCGTGGAAATGGATGGGAAGTTGTTTCACTCACTGCGTCGGCATATGAAGCTGCTCCTAATGTGAAGGAAAGCGAATCGACTGATGAAAATAAAAGCAATTTGTACGAAGCAGAAACTTCCCATGCTTTGTTTATGTCTAGGCACTTCGTATTTCCACCGAATCAGCACGAGAATTTGCCATTGGAACCTGATAAGAGTGAGATTCACGATGATCAAGGAGGGAAGGAGAATGTGGACTCTGATTCTACTGCTGTAGATGGCGGAAAATCAAGTAGAAAGAATGAAGATGTCTTGAATTTAGAAAGGTTGGGTGAGACAGATGAGTTTTCAGGGATTGACAAAACTACGGAGAAAGGCGGCAAGCTGTCTTTTCATGGTGATGAATTTAGTGAAAATACAACGCTACCAGAATTGAATCTGGTTGACAAGGAGCAGGATCCCTTTGATGCTCCTACCTATAGTTCCTTTTATGGTGAAACCAATCTCAGTTCAATGACAAATGATGAAATCCCTCCATTGGAATCTAACGATCAAGTCTCGAATCCAGAAAGCTTGGAAACTCGTAGACTTGATAGTAAGAGCAACAAGTCCAATCTTCCTTGTGGCGCTTGGTGGAAGAGAAGAGCTGCTAATTTATACTCTCATGCAAAAGAAGCGAATGCATTTTGGTCCATTTTCGTTGCAGCAGCTGTTATGGGACTTGTAATACTTGGGCAGCGCTGGCAGCAGGAAAGTTGGCGGACTCTGCAACTGAAAGGGCACATTAGTGTGAACGATCAGGTATATTGATTATTGTTATTTCCGTTTGATGGCATTCTGTTTATCGTTCAGCTTCTTCGTTATTATTCTGTATGCATCTATTCTGTTATGTACTTTGAATTTTGAGTTCCAGATTTATAGAATAGATCTAAGAATAGGAAATTCAAGTTCAATCTCAACAAGAGCCATGGTGCTGACAACTAGGTTCTTAAAATAGCATCATGTGCATGTTGAGTGAAAATAGTTTTCTCTCTTATCTTTGTTTACATCTTTCATCCAAATAGGAGATTAAATTCTGAGATTTCCTACATACCCTGCTAGCTTATTATTCCTTTAAAGATGCATCTGTTGCTTTGACTCGATGTCGAACCGCTAGGCTTAAATTTTACGAGCAGAAACAATGCGAATAAGCTTGTTGTAGCCAGAAATTCGGGGACCTTCCAACAATGAAACCAGTTTTGTTGAGTACCAACAGATCCAAAAGCTAATTCCAGTTCTGATTAGGGGAACTCATTATATGGTTGTAAGGCCAAATTTTTATCTTACCCACTATGTGTTCTAACTTCAAAGCCTCATCTTTGTAGCCATTGAGGAAATATATGGGGATATTCATGTTAAAGTTTCTGGTTCTTAGTTTAGGCTGTTAGCGAATTGAAACTGATATGTTCATAGTGGTAGTTATCTGTTGCAAGTCACCATTTTTCAAGTGGCGTTAAAATTTTTGGGTTGGTCTGCTTATTGGCTTTTGGACTTGGCAACTACACACAAACCTTGCCATCAAGTACTCATTTATTAACAACTTGCTTCCATCATTCCCGTGTTCGTAGCAATGCAATGAATTGTCTGACTCAGCTTTTGAGATGGTAGTTTAAAACCTACTTGGTTGCTTGCAATTGCAACTGTTGGTTGTATCATGGCTATAGAAATGCACCCTCATGCCTATTTTAGAAGAGTTGTATGCTTCCTTCCTTTTCCACGTTGCCTTATTGCCTTAATTTCCATGATACTGTTACAATTTCAGAAGACAATCCGAGTGCTAGGACCAATAACTCGACTTAAAGACGTGATCGTGGGTGGCCAACGCCGTGGTTCGTCCATCAAGTTTAGCCCCAGTGAGTTATAAGATGATGATGATGGTAAGTGTAGAAAAGGAAGAACAGAATGAAAGGAAGAGGTTCGTTGGTCGATTGCCCGAGTGTGTACGACCGCTTTCAAGATTTACACAAGTGCTTTGGGGAACATGTTCGAAGTTTGATTGTTTAAATCATATTTCTATCTTGGTGGTATAGTACCATATTGCATTGTACATTAGCTTAATCCATTATTGGGTGAAATGTAAGTTACAAAGGTCATACCTATATCCCTCTCCCTAGGGGTTCATTTTATTTCGACTCTGTCGAGAACGACCCTTCATATCAGATTGAATGACACGTTTATAGCTCACTGCTCAGGATATTGTTCACTTTTTTTT CCTTCTCCATTTCCCGAGCCAAGTTTCATCCTTATCGTTACGTCGACGCAGTCTCCGGTCGCCGCTGTCTTTCATCTTCTCTCGCTCGGTTCGTCTCTTCTTCTACTGTTCTCTGCAACTCTTGATTGATTCTTTCTGTTTTCTCGTTCGGTCGAGAAGTCGTGTCGGTAATTCTTAATATATTTTTTTTTTAATCTGTTCGGTTTAGTGGTTTTGATTGGAGTTGTTGCCTATTGGTAGGGTGTTAGATCCGTTTGTTGTTTGATCTTGCATACTTGAAAGGATGAATATACGACCTAGATTTATGATTGTGTGTATGTATGTTCTAGATTGGTAATTTATATCTTTGTAGGCCTAATTTGTCTTGATTAGATTGAATTGTGGAATCGCGTTGTAAATTAGAGTGCTAAGCGGGATGTGTCGATCACTCGTCGAATTGACGCGGCACGAGGGAGTTGTCTTCTAAATTTACGACTAATTCCTTAGTTCTAAATACCTCTAATTGTCGTACCGTTGAAATTGCGTCTGGAGTTGCGTTTTTTTCTTCCCTCTTCTTTTTAATTGAGCTGGTAAGATATGTTTTCCTTTGCCAGATTCTGTGAGGTTGGAATACACGAGAACTCCCTTAGAATGGCAGATAATGATGGAGAAGAGAATAACTCTCGTGGAAATGGATGGGAAGTTGTTTCACTCACTGCGTCGGCATATGAAGCTGCTCCTAATGTGAAGGAAAGCGAATCGACTGATGAAAATAAAAGCAATTTGTACGAAGCAGAAACTTCCCATGCTTTGTTTATGTCTAGGCACTTCGTATTTCCACCGAATCAGCACGAGAATTTGCCATTGGAACCTGATAAGAGTGAGATTCACGATGATCAAGGAGGGAAGGAGAATGTGGACTCTGATTCTACTGCTGTAGATGGCGGAAAATCAAGTAGAAAGAATGAAGATGTCTTGAATTTAGAAAGGTTGGGTGAGACAGATGAGTTTTCAGGGATTGACAAAACTACGGAGAAAGGCGGCAAGCTGTCTTTTCATGGTGATGAATTTAGTGAAAATACAACGCTACCAGAATTGAATCTGGTTGACAAGGAGCAGGATCCCTTTGATGCTCCTACCTATAGTTCCTTTTATGGTGAAACCAATCTCAGTTCAATGACAAATGATGAAATCCCTCCATTGGAATCTAACGATCAAGTCTCGAATCCAGAAAGCTTGGAAACTCGTAGACTTGATAGTAAGAGCAACAAGTCCAATCTTCCTTGTGGCGCTTGGTGGAAGAGAAGAGCTGCTAATTTATACTCTCATGCAAAAGAAGCGAATGCATTTTGGTCCATTTTCGTTGCAGCAGCTGTTATGGGACTTGTAATACTTGGGCAGCGCTGGCAGCAGGAAAGTTGGCGGACTCTGCAACTGAAAGGGCACATTAGTGTGAACGATCAGAAGACAATCCGAGTGCTAGGACCAATAACTCGACTTAAAGACGTGATCGTGGGTGGCCAACGCCGTGGTTCGTCCATCAAGTTTAGCCCCAGTGAGTTATAAGATGATGATGATGGTAAGTGTAGAAAAGGAAGAACAGAATGAAAGGAAGAGGTTCGTTGGTCGATTGCCCGAGTGTGTACGACCGCTTTCAAGATTTACACAAGTGCTTTGGGGAACATGTTCGAAGTTTGATTGTTTAAATCATATTTCTATCTTGGTGGTATAGTACCATATTGCATTGTACATTAGCTTAATCCATTATTGGGTGAAATGTAAGTTACAAAGGTCATACCTATATCCCTCTCCCTAGGGGTTCATTTTATTTCGACTCTGTCGAGAACGACCCTTCATATCAGATTGAATGACACGTTTATAGCTCACTGCTCAGGATATTGTTCACTTTTTTTT ATGTTTTCCTTTGCCAGATTCTGTGAGGTTGGAATACACGAGAACTCCCTTAGAATGGCAGATAATGATGGAGAAGAGAATAACTCTCGTGGAAATGGATGGGAAGTTGTTTCACTCACTGCGTCGGCATATGAAGCTGCTCCTAATGTGAAGGAAAGCGAATCGACTGATGAAAATAAAAGCAATTTGTACGAAGCAGAAACTTCCCATGCTTTGTTTATGTCTAGGCACTTCGTATTTCCACCGAATCAGCACGAGAATTTGCCATTGGAACCTGATAAGAGTGAGATTCACGATGATCAAGGAGGGAAGGAGAATGTGGACTCTGATTCTACTGCTGTAGATGGCGGAAAATCAAGTAGAAAGAATGAAGATGTCTTGAATTTAGAAAGGTTGGGTGAGACAGATGAGTTTTCAGGGATTGACAAAACTACGGAGAAAGGCGGCAAGCTGTCTTTTCATGGTGATGAATTTAGTGAAAATACAACGCTACCAGAATTGAATCTGGTTGACAAGGAGCAGGATCCCTTTGATGCTCCTACCTATAGTTCCTTTTATGGTGAAACCAATCTCAGTTCAATGACAAATGATGAAATCCCTCCATTGGAATCTAACGATCAAGTCTCGAATCCAGAAAGCTTGGAAACTCGTAGACTTGATAGTAAGAGCAACAAGTCCAATCTTCCTTGTGGCGCTTGGTGGAAGAGAAGAGCTGCTAATTTATACTCTCATGCAAAAGAAGCGAATGCATTTTGGTCCATTTTCGTTGCAGCAGCTGTTATGGGACTTGTAATACTTGGGCAGCGCTGGCAGCAGGAAAGTTGGCGGACTCTGCAACTGAAAGGGCACATTAGTGTGAACGATCAGAAGACAATCCGAGTGCTAGGACCAATAACTCGACTTAAAGACGTGATCGTGGGTGGCCAACGCCGTGGTTCGTCCATCAAGTTTAGCCCCAGTGAGTTATAA MFSFARFCEVGIHENSLRMADNDGEENNSRGNGWEVVSLTASAYEAAPNVKESESTDENKSNLYEAETSHALFMSRHFVFPPNQHENLPLEPDKSEIHDDQGGKENVDSDSTAVDGGKSSRKNEDVLNLERLGETDEFSGIDKTTEKGGKLSFHGDEFSENTTLPELNLVDKEQDPFDAPTYSSFYGETNLSSMTNDEIPPLESNDQVSNPESLETRRLDSKSNKSNLPCGAWWKRRAANLYSHAKEANAFWSIFVAAAVMGLVILGQRWQQESWRTLQLKGHISVNDQKTIRVLGPITRLKDVIVGGQRRGSSIKFSPSEL
BLAST of Carg20994 vs. NCBI nr
Match: XP_022924470.1 (ATG8-interacting protein 1-like isoform X1 [Cucurbita moschata] >XP_022924471.1 ATG8-interacting protein 1-like isoform X1 [Cucurbita moschata] >XP_022924472.1 ATG8-interacting protein 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 593.6 bits (1529), Expect = 4.1e-166 Identity = 298/304 (98.03%), Postives = 301/304 (99.01%), Query Frame = 0
BLAST of Carg20994 vs. NCBI nr
Match: XP_023528014.1 (ATG8-interacting protein 1-like [Cucurbita pepo subsp. pepo] >XP_023528016.1 ATG8-interacting protein 1-like [Cucurbita pepo subsp. pepo] >XP_023528017.1 ATG8-interacting protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 592.4 bits (1526), Expect = 9.1e-166 Identity = 297/304 (97.70%), Postives = 301/304 (99.01%), Query Frame = 0
BLAST of Carg20994 vs. NCBI nr
Match: XP_022979458.1 (ATG8-interacting protein 1-like isoform X1 [Cucurbita maxima] >XP_022979459.1 ATG8-interacting protein 1-like isoform X1 [Cucurbita maxima] >XP_022979460.1 ATG8-interacting protein 1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 587.4 bits (1513), Expect = 2.9e-164 Identity = 295/304 (97.04%), Postives = 300/304 (98.68%), Query Frame = 0
BLAST of Carg20994 vs. NCBI nr
Match: XP_022924473.1 (ATG8-interacting protein 1-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 587.0 bits (1512), Expect = 3.8e-164 Identity = 297/304 (97.70%), Postives = 300/304 (98.68%), Query Frame = 0
BLAST of Carg20994 vs. NCBI nr
Match: XP_022979461.1 (ATG8-interacting protein 1-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 580.9 bits (1496), Expect = 2.7e-162 Identity = 294/304 (96.71%), Postives = 299/304 (98.36%), Query Frame = 0
BLAST of Carg20994 vs. TAIR10
Match: AT2G45980.1 (unknown protein) HSP 1 Score: 174.9 bits (442), Expect = 8.2e-44 Identity = 126/309 (40.78%), Postives = 162/309 (52.43%), Query Frame = 0
BLAST of Carg20994 vs. TAIR10
Match: AT4G00355.3 (unknown protein) HSP 1 Score: 167.9 bits (424), Expect = 1.0e-41 Identity = 120/312 (38.46%), Postives = 164/312 (52.56%), Query Frame = 0
BLAST of Carg20994 vs. TAIR10
Match: AT4G10080.1 (unknown protein) HSP 1 Score: 47.8 bits (112), Expect = 1.5e-05 Identity = 25/78 (32.05%), Postives = 39/78 (50.00%), Query Frame = 0
BLAST of Carg20994 vs. Swiss-Prot
Match: sp|O82775|ATI1_ARATH (ATG8-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=ATI1 PE=1 SV=2) HSP 1 Score: 174.9 bits (442), Expect = 1.5e-42 Identity = 126/309 (40.78%), Postives = 162/309 (52.43%), Query Frame = 0
BLAST of Carg20994 vs. Swiss-Prot
Match: sp|Q8VY98|ATI2_ARATH (ATG8-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=ATI2 PE=1 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.8e-40 Identity = 120/312 (38.46%), Postives = 164/312 (52.56%), Query Frame = 0
BLAST of Carg20994 vs. TrEMBL
Match: tr|A0A0A0L483|A0A0A0L483_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122320 PE=4 SV=1) HSP 1 Score: 525.8 bits (1353), Expect = 6.9e-146 Identity = 266/304 (87.50%), Postives = 281/304 (92.43%), Query Frame = 0
BLAST of Carg20994 vs. TrEMBL
Match: tr|A0A1S3AVI5|A0A1S3AVI5_CUCME (ATG8-interacting protein 1 OS=Cucumis melo OX=3656 GN=LOC103483267 PE=4 SV=1) HSP 1 Score: 519.2 bits (1336), Expect = 6.5e-144 Identity = 262/304 (86.18%), Postives = 280/304 (92.11%), Query Frame = 0
BLAST of Carg20994 vs. TrEMBL
Match: tr|A0A2N9HCH6|A0A2N9HCH6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37223 PE=4 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 7.5e-84 Identity = 182/316 (57.59%), Postives = 215/316 (68.04%), Query Frame = 0
BLAST of Carg20994 vs. TrEMBL
Match: tr|A0A2I4HUA9|A0A2I4HUA9_9ROSI (ATG8-interacting protein 2-like OS=Juglans regia OX=51240 GN=LOC109021530 PE=4 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 1.8e-82 Identity = 179/312 (57.37%), Postives = 216/312 (69.23%), Query Frame = 0
BLAST of Carg20994 vs. TrEMBL
Match: tr|A0A2P4IQG0|A0A2P4IQG0_QUESU (Atg8-interacting protein 1 OS=Quercus suber OX=58331 GN=CFP56_49086 PE=4 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 2.7e-81 Identity = 186/313 (59.42%), Postives = 218/313 (69.65%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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