Cucsa.253000 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGAAGAGGAAATTGAAAAAGAAAGAAAGAAAAaGAATGGGTCTGAAATCAAATTTGTTAGTTCTGGTGATGGTTTTTGGTGCTTTGGGATCAGCTCCATTAATGGCGGAAGCTCAGTTTAATATTATCGGGAGTCTCCTTAAACTTATCAACATCCAAGGAACTGTCTTTTGCACTGCCGATGGCAACATTGGCACCAACGCCACTTCCACCCCTGTTTTCCCGAGTATCCCATTTTTCTATCACCTTCTTCTTTCATAACTCTTTtCTTTTTtCCATTCTTTTTCTGTTGGCTTTCTTTCTTTCTTTCTTTTTACAAaTTTTTCAAAAATGATTTTAAATTTCACTTAAAACAACTAAGAAACTTATACTTAAAATCGCAAAAAaTATATTGATTATAATATTTTTTttAAAAAAaGAAGTCAAATATTTATTAAATAGGACTCTTGAACTTCTTTTTTTttAATGTTAATTATATTCATGAACTAATATTTTGTATGTTATGAATTAAAATTATATTTTTTtCAATGTTATAATGAAAGGTTAGGTTGCTTCTTTTTTtGAGATTTTAAGTTAAATATAGATGATTTTTTTTTTtCAGACGCACTAGTGCAATTGCAATGTGGAAATGGAAACATTGTATCAACTACAACAACAAACAATGGGGGAATCTTTTCGATGTTTTTGAATCCTGTACAATTTGTTCTTTCCTCACTCTTAAGCAATTGCAACCTCGTAGTGAAGACTCCAATATCCGATTGTAATGCAACGTTACCATCTACTGGATTTCTAACGTCCTCACTGCAATTCCTTGGAAGTTTTGTGCAAGATGGCCTCATGCAGATCATGAAAGTAGCCCCCAACCCATTCACATTCATTCCATCTCCTTAAAATGCAAGCTATGGGCTAAATATATTCACCAAAGGGAGAAAGGAATAACAAGAAAGTATAGTACTTATTTGAATTTTTAGTACTTGTAATGTATGAGTTCTCTTTCAAAATTGATTGAGTACTTATGTTGTTTGTTGTCGTGTTTATGCATGTTTGTTTTCGTTCATTCCAAAAaTAAAaGATCGTGTGCTTGTTGTTCTTATAGTTATTTCAAGGACGTGAAGTCAAGGTAAAACTGTTGTAATTTAAAAGATACATACAATATTTATATATATTGTTTGTTTGTGTGTGAATTTGTGT TAGAAGAGGAAATTGAAAAAGAAAGAAAGAAAAAGAATGGGTCTGAAATCAAATTTGTTAGTTCTGGTGATGGTTTTTGGTGCTTTGGGATCAGCTCCATTAATGGCGGAAGCTCAGTTTAATATTATCGGGAGTCTCCTTAAACTTATCAACATCCAAGGAACTGTCTTTTGCACTGCCGATGGCAACATTGGCACCAACGCCACTTCCACCCCTGTTTTCCCGAACGCACTAGTGCAATTGCAATGTGGAAATGGAAACATTGTATCAACTACAACAACAAACAATGGGGGAATCTTTTCGATGTTTTTGAATCCTGTACAATTTGTTCTTTCCTCACTCTTAAGCAATTGCAACCTCGTAGTGAAGACTCCAATATCCGATTGTAATGCAACGTTACCATCTACTGGATTTCTAACGTCCTCACTGCAATTCCTTGGAAGTTTTGTGCAAGATGGCCTCATGCAGATCATGAAAGTAGCCCCCAACCCATTCACATTCATTCCATCTCCTTAAAATGCAAGCTATGGGCTAAATATATTCACCAAAGGGAGAAAGGAATAACAAGAAAGTATAGTACTTATTTGAATTTTTAGTACTTGTAATGTATGAGTTCTCTTTCAAAATTGATTGAGTACTTATGTTGTTTGTTGTCGTGTTTATGCATGTTTGTTTTCGTTCATTCCAAAAATAAAAGATCGTGTGCTTGTTGTTCTTATAGTTATTTCAAGGACGTGAAGTCAAGGTAAAACTGTTGTAATTTAAAAGATACATACAATATTTATATATATTGTTTGTTTGTGTGTGAATTTGTGT ATGGGTCTGAAATCAAATTTGTTAGTTCTGGTGATGGTTTTTGGTGCTTTGGGATCAGCTCCATTAATGGCGGAAGCTCAGTTTAATATTATCGGGAGTCTCCTTAAACTTATCAACATCCAAGGAACTGTCTTTTGCACTGCCGATGGCAACATTGGCACCAACGCCACTTCCACCCCTGTTTTCCCGAACGCACTAGTGCAATTGCAATGTGGAAATGGAAACATTGTATCAACTACAACAACAAACAATGGGGGAATCTTTTCGATGTTTTTGAATCCTGTACAATTTGTTCTTTCCTCACTCTTAAGCAATTGCAACCTCGTAGTGAAGACTCCAATATCCGATTGTAATGCAACGTTACCATCTACTGGATTTCTAACGTCCTCACTGCAATTCCTTGGAAGTTTTGTGCAAGATGGCCTCATGCAGATCATGAAAGTAGCCCCCAACCCATTCACATTCATTCCATCTCCTTAA MGLKSNLLVLVMVFGALGSAPLMAEAQFNIIGSLLKLINIQGTVFCTADGNIGTNATSTPVFPNALVQLQCGNGNIVSTTTTNNGGIFSMFLNPVQFVLSSLLSNCNLVVKTPISDCNATLPSTGFLTSSLQFLGSFVQDGLMQIMKVAPNPFTFIPSP*
BLAST of Cucsa.253000 vs. Swiss-Prot
Match: PHYLL_TOBAC (Phylloplanin OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 8.6e-20 Identity = 63/155 (40.65%), Postives = 86/155 (55.48%), Query Frame = 1
BLAST of Cucsa.253000 vs. TrEMBL
Match: A0A0A0L595_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G154410 PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 3.8e-83 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1
BLAST of Cucsa.253000 vs. TrEMBL
Match: W9REW7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023503 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 9.5e-42 Identity = 91/156 (58.33%), Postives = 118/156 (75.64%), Query Frame = 1
BLAST of Cucsa.253000 vs. TrEMBL
Match: A0A061EQC5_THECC (Pollen Ole e 1 allergen and extensin family protein, putative OS=Theobroma cacao GN=TCM_021233 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.2e-41 Identity = 94/159 (59.12%), Postives = 117/159 (73.58%), Query Frame = 1
BLAST of Cucsa.253000 vs. TrEMBL
Match: B9HXT5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s01620g PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 1.8e-40 Identity = 90/158 (56.96%), Postives = 118/158 (74.68%), Query Frame = 1
BLAST of Cucsa.253000 vs. TrEMBL
Match: D7SYD8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g02280 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 8.9e-40 Identity = 90/158 (56.96%), Postives = 120/158 (75.95%), Query Frame = 1
BLAST of Cucsa.253000 vs. TAIR10
Match: AT3G16660.1 (AT3G16660.1 Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 115.2 bits (287), Expect = 3.8e-26 Identity = 60/125 (48.00%), Postives = 84/125 (67.20%), Query Frame = 1
BLAST of Cucsa.253000 vs. TAIR10
Match: AT3G16670.1 (AT3G16670.1 Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 106.3 bits (264), Expect = 1.8e-23 Identity = 62/132 (46.97%), Postives = 82/132 (62.12%), Query Frame = 1
BLAST of Cucsa.253000 vs. NCBI nr
Match: gi|778678925|ref|XP_004134491.2| (PREDICTED: phylloplanin-like [Cucumis sativus]) HSP 1 Score: 315.5 bits (807), Expect = 5.5e-83 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1
BLAST of Cucsa.253000 vs. NCBI nr
Match: gi|659076845|ref|XP_008438895.1| (PREDICTED: phylloplanin-like [Cucumis melo]) HSP 1 Score: 248.8 bits (634), Expect = 6.3e-63 Identity = 125/158 (79.11%), Postives = 144/158 (91.14%), Query Frame = 1
BLAST of Cucsa.253000 vs. NCBI nr
Match: gi|1009163293|ref|XP_015899888.1| (PREDICTED: phylloplanin-like [Ziziphus jujuba]) HSP 1 Score: 181.8 bits (460), Expect = 9.4e-43 Identity = 98/158 (62.03%), Postives = 121/158 (76.58%), Query Frame = 1
BLAST of Cucsa.253000 vs. NCBI nr
Match: gi|703105485|ref|XP_010098257.1| (hypothetical protein L484_023503 [Morus notabilis]) HSP 1 Score: 177.9 bits (450), Expect = 1.4e-41 Identity = 91/156 (58.33%), Postives = 118/156 (75.64%), Query Frame = 1
BLAST of Cucsa.253000 vs. NCBI nr
Match: gi|590661270|ref|XP_007035626.1| (Pollen Ole e 1 allergen and extensin family protein, putative [Theobroma cacao]) HSP 1 Score: 177.6 bits (449), Expect = 1.8e-41 Identity = 94/159 (59.12%), Postives = 117/159 (73.58%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |