Cucsa.250910 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.250910
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionA9
Locationscaffold02229 : 74163 .. 74758 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAACTCAAAAAAACAGAGATTAAAAGCAAAACAAAGGAGCAACTATGGCAGGCATCAAGTCTCTTGGGCAGCAGCAAGTTGTGATTCTGTCGTTGCTGGCTTTGATACTGGCTCAAGCACAGGCACAGCCTCAAGGCTGCTCAACTCAGCTCAGCAACTTAAATAGTTGTGCACCATTTGTGCTTCCTGGTGCTACTAACCCAAGCCCAGAGTGCTGTGGTGCACTTGGAGCTGTGCAACAAGATTGCCTTTGCAGCACCCTTAGAATTGCCTCCACTCTCCCTTCTCTTTGCCAACTTCCAACTCTCTCTTGTGGTCAGTCTTTTCTTTCTTTTTCTAACCATTTTTCTCAAGAATTGGCTGTTTCTGTTGAACGAAAGGTTTCTTTTTTCTTTTTGCTTCATTTCAGGTTCAAACTAGAAGAGAAGGCTGATGTGGAAATCACCACGATAAACGAAATGAATAGTAATAATAATGTTGTAGTTTTCCATTTGGTTTTGTTTGTGTTTCTCCTTTCCTGTTTGATCTGAGATCAATGATCTCAGAAGTCAGCTGGTTTCATTGAATAAAAAGGCACCCTTTACCTTTTTCTTCT

mRNA sequence

AGAACTCAAAAAAACAGAGATTAAAAGCAAAACAAAGGAGCAACTATGGCAGGCATCAAGTCTCTTGGGCAGCAGCAAGTTGTGATTCTGTCGTTGCTGGCTTTGATACTGGCTCAAGCACAGGCACAGCCTCAAGGCTGCTCAACTCAGCTCAGCAACTTAAATAGTTGTGCACCATTTGTGCTTCCTGGTGCTACTAACCCAAGCCCAGAGTGCTGTGGTGCACTTGGAGCTGTGCAACAAGATTGCCTTTGCAGCACCCTTAGAATTGCCTCCACTCTCCCTTCTCTTTGCCAACTTCCAACTCTCTCTTGTGGTTCAAACTAGAAGAGAAGGCTGATGTGGAAATCACCACGATAAACGAAATGAATAGTAATAATAATGTTGTAGTTTTCCATTTGGTTTTGTTTGTGTTTCTCCTTTCCTGTTTGATCTGAGATCAATGATCTCAGAAGTCAGCTGGTTTCATTGAATAAAAAGGCACCCTTTACCTTTTTCTTCT

Coding sequence (CDS)

ATGGCAGGCATCAAGTCTCTTGGGCAGCAGCAAGTTGTGATTCTGTCGTTGCTGGCTTTGATACTGGCTCAAGCACAGGCACAGCCTCAAGGCTGCTCAACTCAGCTCAGCAACTTAAATAGTTGTGCACCATTTGTGCTTCCTGGTGCTACTAACCCAAGCCCAGAGTGCTGTGGTGCACTTGGAGCTGTGCAACAAGATTGCCTTTGCAGCACCCTTAGAATTGCCTCCACTCTCCCTTCTCTTTGCCAACTTCCAACTCTCTCTTGTGGTTCAAACTAG

Protein sequence

MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN*
Homology
[Close]
BLAST of Cucsa.250910 vs. Swiss-Prot
Match: MEN8_SILLA (Protein MEN-8 OS=Silene latifolia GN=MEN-8 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.9e-19
Identity = 46/84 (54.76%), Postives = 60/84 (71.43%), Query Frame = 1 

Query: 13  VILSLLALI--LAQAQAQPQGCSTQLSNLNSCAPFVLPGA--TNPSPECCGALGAVQQDC 72
           + L  LA++  L  ++AQ  GC++QL NLN CAP+V+PGA  TNPS ECC AL  V  DC
Sbjct: 17  IFLVALAILVQLKGSEAQAGGCASQLGNLNVCAPYVVPGAVNTNPSQECCAALSGVNHDC 76

Query: 73  LCSTLRIASTLPSLCQLPTLSCGS 93
           +C+TLR+AS LPS C L  L+CG+
Sbjct: 77  MCNTLRVASQLPSSCNLAALNCGN 100

[Close]
BLAST of Cucsa.250910 vs. Swiss-Prot
Match: FIL1_ANTMA (Stamen-specific protein FIL1 OS=Antirrhinum majus GN=FIL1 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.8e-18
Identity = 49/96 (51.04%), Postives = 67/96 (69.79%), Query Frame = 1 

Query: 1  MAGIKSLGQQQVVILSLLALILAQAQ----AQPQGCSTQLSNLNSCAPFVLPGA-TNPSP 60
          MA +KS     +V L +L +++AQ+Q    ++ Q CS  L+NLN+CAPFV+ GA T PS 
Sbjct: 1  MAAMKS-----IVPLVMLTVLVAQSQLITQSEAQTCSASLANLNACAPFVVLGAATTPSS 60

Query: 61 ECCGALGAVQQDCLCSTLRIASTLPSLCQLPTLSCG 92
          +CC AL +V  +CLC+TLRIAS +P+ C LP LSCG
Sbjct: 61 DCCTALQSVDHECLCNTLRIASRVPAQCNLPPLSCG 91

[Close]
BLAST of Cucsa.250910 vs. Swiss-Prot
Match: 108_SOLLC (Protein 108 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.0e-16
Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = 1 

Query: 1   MAGIKSLGQQQV-----VILSLLALILAQAQA---QPQ-GCSTQLSNLNSCAPFVLPGAT 60
           MA +KS           ++L +L +I+ Q+Q    QPQ  C+  L+ LN CAPF++PG+ 
Sbjct: 1   MASVKSSSSSSSSSFISLLLLILLVIVLQSQVIECQPQQSCTASLTGLNVCAPFLVPGSP 60

Query: 61  NPSPECCGALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
             S ECC A+ ++  DC+C+T+RIA+ +P+ C LP LSC +N
Sbjct: 61  TASTECCNAVQSINHDCMCNTMRIAAQIPAQCNLPPLSCSAN 102

[Close]
BLAST of Cucsa.250910 vs. Swiss-Prot
Match: LIM2_LILLO (Protein LIM2 OS=Lilium longiflorum GN=LIM2 PE=3 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-14
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 1 

Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATN-PSPECCG 60
          MA +KSL    +V+L L AL     + + Q CS  +  L +C P+VLPG    PS +CC 
Sbjct: 1  MASMKSLATAILVVLLLAAL---SREGRSQNCSAAIGELMTCGPYVLPGNNGAPSEQCCS 60

Query: 61 ALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGS 93
          AL AV   CLC T+ I S+LP  C LP ++C S
Sbjct: 61 ALRAVNHGCLCETINIISSLPDHCSLPAVNCAS 90

[Close]
BLAST of Cucsa.250910 vs. Swiss-Prot
Match: A9_ARATH (Tapetum-specific protein A9 OS=Arabidopsis thaliana GN=A9 PE=2 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-14
Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = 1 

Query: 12 VVILSLLALILAQAQAQ-----PQGCSTQLSNLNSCAPFVLPGATNPSPE--CCGALGAV 71
          V + SL A+++A   A       Q C  +LSN+  CAP +LPGA NP+    CC AL A 
Sbjct: 2  VSLKSLAAILVAMFLATGPTVLAQQCRDELSNVQVCAPLLLPGAVNPAANSNCCAALQAT 61

Query: 72 QQDCLCSTLRIASTLPSLCQLPTLSCG 92
           +DCLC+ LR A+TL SLC LP+  CG
Sbjct: 62 NKDCLCNALRAATTLTSLCNLPSFDCG 88

[Close]
BLAST of Cucsa.250910 vs. TrEMBL
Match: A0A0A0LBB5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G180390 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 2.4e-45
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1 

Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA
Sbjct: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN
Sbjct: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 93

[Close]
BLAST of Cucsa.250910 vs. TrEMBL
Match: B9ID39_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s13570g PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-21
Identity = 55/94 (58.51%), Postives = 67/94 (71.28%), Query Frame = 1 

Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGA--TNPSPECC 60
          MA +KSL     V+L L AL +    A  Q C++QL+NLN CAPFV+PGA  TNP+ ECC
Sbjct: 1  MAALKSLSSPVAVLLLLTALAVQTQLAHSQQCTSQLNNLNVCAPFVVPGAANTNPNAECC 60

Query: 61 GALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGS 93
           AL AVQ DCLCSTL+I+S LPS C LP L+CG+
Sbjct: 61 NALEAVQHDCLCSTLQISSRLPSQCNLPPLTCGN 94

[Close]
BLAST of Cucsa.250910 vs. TrEMBL
Match: B9I4C6_POPTR (Tapetum-specific protein A9 OS=Populus trichocarpa GN=POPTR_0012s13560g PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-21
Identity = 53/94 (56.38%), Postives = 69/94 (73.40%), Query Frame = 1 

Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGA--TNPSPECC 60
          MA +KSL     ++L L+AL +    A  Q C++QL++LN CAPFV+PGA  TNPS +CC
Sbjct: 1  MASLKSLSSPAALLLLLIALAVQTQLAHSQICTSQLNSLNVCAPFVVPGAPNTNPSTDCC 60

Query: 61 GALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGS 93
           ALGAVQ DCLCSTL+IA+ LPS C LP ++CG+
Sbjct: 61 NALGAVQHDCLCSTLQIAARLPSQCNLPPITCGN 94

[Close]
BLAST of Cucsa.250910 vs. TrEMBL
Match: W9RWP6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015746 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.0e-20
Identity = 54/99 (54.55%), Postives = 70/99 (70.71%), Query Frame = 1 

Query: 1  MAGIKSLGQQQVVILSLLALILAQ------AQAQPQGCSTQLSNLNSCAPFVLPGATNPS 60
          MA  KS+  Q  +++ L+  ++AQ      AQ  PQ C+++L+NLNSCAPFV+PGA NP 
Sbjct: 1  MASPKSVCYQAGLLVLLITALVAQQSHTAEAQVSPQ-CTSRLNNLNSCAPFVVPGAANPQ 60

Query: 61 P--ECCGALGAVQQDCLCSTLRIASTLPSLCQLPTLSCG 92
          P  +CC AL AV  DC+C+TLRIAS LPSLC +P LSCG
Sbjct: 61 PSAQCCAALQAVDHDCVCNTLRIASRLPSLCNIPPLSCG 98

[Close]
BLAST of Cucsa.250910 vs. TrEMBL
Match: A0A0D2RQG5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G046900 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-19
Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = 1 

Query: 4  IKSLGQQQVVILSLLALILAQAQ-AQPQGCSTQLSNLNSCAPFVLPGAT--NPSPECCGA 63
          + SL  Q   IL LL +   Q Q A+ Q C+ +L+NLN CAPFV+PGAT  NPSP+CC A
Sbjct: 7  VASLSSQAAAILVLLTVAAVQTQTAKAQSCTPELTNLNVCAPFVVPGATQTNPSPDCCAA 66

Query: 64 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGS 93
          L +VQ DCLCSTL IAS LPS C LP L+ G+
Sbjct: 67 LQSVQHDCLCSTLSIASRLPSQCNLPPLTSGN 98

[Close]
BLAST of Cucsa.250910 vs. TAIR10
Match: AT5G52160.1 (AT5G52160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 94.7 bits (234), Expect = 3.1e-20
Identity = 46/87 (52.87%), Postives = 57/87 (65.52%), Query Frame = 1 

Query: 6  SLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGA--TNPSPECCGALGA 65
          S+   +V ++  L L++A      Q C+ QLS LN C  FV+PGA  TNPS ECC AL A
Sbjct: 9  SMSFMKVAMMVALVLVVAATVVDGQSCNAQLSTLNVCGEFVVPGADRTNPSAECCNALEA 68

Query: 66 VQQDCLCSTLRIASTLPSLCQLPTLSC 91
          V  +CLC+T RIAS LPS C +PTLSC
Sbjct: 69 VPNECLCNTFRIASRLPSRCNIPTLSC 95

[Close]
BLAST of Cucsa.250910 vs. TAIR10
Match: AT5G62080.1 (AT5G62080.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 1.9e-17
Identity = 41/93 (44.09%), Postives = 55/93 (59.14%), Query Frame = 1 

Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MA  KS     V+ +  LA+   +   Q Q C   L+N+  CA  VLPG+  P+ ECC A
Sbjct: 4  MASFKSFAA--VLSVLFLAMTAIETVVQAQECGNDLANVQVCAAMVLPGSGRPNSECCAA 63

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          L +  +DCLC+ LR A++LPSLC LP + CG N
Sbjct: 64 LQSTNRDCLCNALRAATSLPSLCNLPPVDCGIN 94

[Close]
BLAST of Cucsa.250910 vs. TAIR10
Match: AT5G07230.1 (AT5G07230.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 79.3 bits (194), Expect = 1.4e-15
Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = 1 

Query: 12 VVILSLLALILAQAQAQ-----PQGCSTQLSNLNSCAPFVLPGATNPSPE--CCGALGAV 71
          V + SL A+++A   A       Q C  +LSN+  CAP +LPGA NP+    CC AL A 
Sbjct: 2  VSLKSLAAILVAMFLATGPTVLAQQCRDELSNVQVCAPLLLPGAVNPAANSNCCAALQAT 61

Query: 72 QQDCLCSTLRIASTLPSLCQLPTLSCG 92
           +DCLC+ LR A+TL SLC LP+  CG
Sbjct: 62 NKDCLCNALRAATTLTSLCNLPSFDCG 88

[Close]
BLAST of Cucsa.250910 vs. NCBI nr
Match: gi|449446055|ref|XP_004140787.1| (PREDICTED: protein MEN-8 [Cucumis sativus])

HSP 1 Score: 189.1 bits (479), Expect = 3.5e-45
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1 

Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA
Sbjct: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN
Sbjct: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 93

[Close]
BLAST of Cucsa.250910 vs. NCBI nr
Match: gi|659077392|ref|XP_008439180.1| (PREDICTED: protein MEN-8-like [Cucumis melo])

HSP 1 Score: 180.3 bits (456), Expect = 1.6e-42
Identity = 87/93 (93.55%), Postives = 90/93 (96.77%), Query Frame = 1 

Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MAG+KSLG+QQVVILSLLAL+L QAQAQPQGCSTQLSNLNSCAPFVLPGA NPSPECCGA
Sbjct: 1  MAGVKSLGKQQVVILSLLALMLVQAQAQPQGCSTQLSNLNSCAPFVLPGAPNPSPECCGA 60

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          LGAVQQDCLCSTLRIASTLPSLC LPTLSCGSN
Sbjct: 61 LGAVQQDCLCSTLRIASTLPSLCHLPTLSCGSN 93

[Close]
BLAST of Cucsa.250910 vs. NCBI nr
Match: gi|224122428|ref|XP_002318831.1| (Tapetum-specific protein A9 precursor [Populus trichocarpa])

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-21
Identity = 53/94 (56.38%), Postives = 69/94 (73.40%), Query Frame = 1 

Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGA--TNPSPECC 60
          MA +KSL     ++L L+AL +    A  Q C++QL++LN CAPFV+PGA  TNPS +CC
Sbjct: 1  MASLKSLSSPAALLLLLIALAVQTQLAHSQICTSQLNSLNVCAPFVVPGAPNTNPSTDCC 60

Query: 61 GALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGS 93
           ALGAVQ DCLCSTL+IA+ LPS C LP ++CG+
Sbjct: 61 NALGAVQHDCLCSTLQIAARLPSQCNLPPITCGN 94

[Close]
BLAST of Cucsa.250910 vs. NCBI nr
Match: gi|224134715|ref|XP_002321889.1| (hypothetical protein POPTR_0015s13570g [Populus trichocarpa])

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-21
Identity = 55/94 (58.51%), Postives = 67/94 (71.28%), Query Frame = 1 

Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGA--TNPSPECC 60
          MA +KSL     V+L L AL +    A  Q C++QL+NLN CAPFV+PGA  TNP+ ECC
Sbjct: 1  MAALKSLSSPVAVLLLLTALAVQTQLAHSQQCTSQLNNLNVCAPFVVPGAANTNPNAECC 60

Query: 61 GALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGS 93
           AL AVQ DCLCSTL+I+S LPS C LP L+CG+
Sbjct: 61 NALEAVQHDCLCSTLQISSRLPSQCNLPPLTCGN 94

[Close]
BLAST of Cucsa.250910 vs. NCBI nr
Match: gi|703141028|ref|XP_010107405.1| (hypothetical protein L484_015746 [Morus notabilis])

HSP 1 Score: 104.8 bits (260), Expect = 8.6e-20
Identity = 54/99 (54.55%), Postives = 70/99 (70.71%), Query Frame = 1 

Query: 1  MAGIKSLGQQQVVILSLLALILAQ------AQAQPQGCSTQLSNLNSCAPFVLPGATNPS 60
          MA  KS+  Q  +++ L+  ++AQ      AQ  PQ C+++L+NLNSCAPFV+PGA NP 
Sbjct: 1  MASPKSVCYQAGLLVLLITALVAQQSHTAEAQVSPQ-CTSRLNNLNSCAPFVVPGAANPQ 60

Query: 61 P--ECCGALGAVQQDCLCSTLRIASTLPSLCQLPTLSCG 92
          P  +CC AL AV  DC+C+TLRIAS LPSLC +P LSCG
Sbjct: 61 PSAQCCAALQAVDHDCVCNTLRIASRLPSLCNIPPLSCG 98

The following BLAST results are available for this feature:
BLAST of Cucsa.250910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MEN8_SILLA1.9e-1954.76Protein MEN-8 OS=Silene latifolia GN=MEN-8 PE=3 SV=1[more]
FIL1_ANTMA2.8e-1851.04Stamen-specific protein FIL1 OS=Antirrhinum majus GN=FIL1 PE=2 SV=1[more]
108_SOLLC2.0e-1641.18Protein 108 OS=Solanum lycopersicum PE=2 SV=1[more]
LIM2_LILLO1.1e-1444.09Protein LIM2 OS=Lilium longiflorum GN=LIM2 PE=3 SV=2[more]
A9_ARATH2.4e-1447.13Tapetum-specific protein A9 OS=Arabidopsis thaliana GN=A9 PE=2 SV=2[more]
BLAST of Cucsa.250910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBB5_CUCSA2.4e-45100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G180390 PE=4 SV=1[more]
B9ID39_POPTR1.4e-2158.51Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s13570g PE=4 SV=1[more]
B9I4C6_POPTR1.4e-2156.38Tapetum-specific protein A9 OS=Populus trichocarpa GN=POPTR_0012s13560g PE=4 SV=... [more]
W9RWP6_9ROSA6.0e-2054.55Uncharacterized protein OS=Morus notabilis GN=L484_015746 PE=4 SV=1[more]
A0A0D2RQG5_GOSRA1.0e-1957.61Uncharacterized protein OS=Gossypium raimondii GN=B456_006G046900 PE=4 SV=1[more]
BLAST of Cucsa.250910 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G52160.13.1e-2052.87 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G62080.11.9e-1744.09 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G07230.11.4e-1547.13 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of Cucsa.250910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449446055|ref|XP_004140787.1|3.5e-45100.00PREDICTED: protein MEN-8 [Cucumis sativus][more]
gi|659077392|ref|XP_008439180.1|1.6e-4293.55PREDICTED: protein MEN-8-like [Cucumis melo][more]
gi|224122428|ref|XP_002318831.1|2.1e-2156.38Tapetum-specific protein A9 precursor [Populus trichocarpa][more]
gi|224134715|ref|XP_002321889.1|2.1e-2158.51hypothetical protein POPTR_0015s13570g [Populus trichocarpa][more]
gi|703141028|ref|XP_010107405.1|8.6e-2054.55hypothetical protein L484_015746 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.250910.1Cucsa.250910.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 21..74
score: 2.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 32..90
score: 8.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 18..91
score: 3.66
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 36..74
score: 9.
NoneNo IPR availablePANTHERPTHR35501FAMILY NOT NAMEDcoord: 2..93
score: 1.6
NoneNo IPR availablePANTHERPTHR35501:SF2PROTEASE INHIBITOR/SEED STORAGE/LIPID TRANSFER PROTEIN (LTP) FAMILY PROTEIN-RELATEDcoord: 2..93
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.250910Cla006201Watermelon (97103) v1cgywmB479
Cucsa.250910Csa3G180390Cucumber (Chinese Long) v2cgycuB366
Cucsa.250910MELO3C006883Melon (DHL92) v3.5.1cgymeB439
Cucsa.250910CSPI03G16700Wild cucumber (PI 183967)cgycpiB383
Cucsa.250910CmaCh18G012320Cucurbita maxima (Rimu)cgycmaB0716
Cucsa.250910CmoCh18G012550Cucurbita moschata (Rifu)cgycmoB0709
Cucsa.250910Lsi05G012540Bottle gourd (USVL1VR-Ls)cgylsiB416
Cucsa.250910MELO3C006883.2Melon (DHL92) v3.6.1cgymedB432
Cucsa.250910CsaV3_3G016880Cucumber (Chinese Long) v3cgycucB387
Cucsa.250910Cla97C05G089860Watermelon (97103) v2cgywmbB452
Cucsa.250910Bhi01G000987Wax gourdcgywgoB516
Cucsa.250910Carg22084Silver-seed gourdcarcgyB0829
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.250910Cucurbita pepo (Zucchini)cgycpeB0668
Cucsa.250910Cucurbita pepo (Zucchini)cgycpeB0673
Cucsa.250910Cucurbita pepo (Zucchini)cgycpeB0686
Cucsa.250910Bottle gourd (USVL1VR-Ls)cgylsiB411
Cucsa.250910Melon (DHL92) v3.6.1cgymedB422
Cucsa.250910Melon (DHL92) v3.6.1cgymedB426
Cucsa.250910Silver-seed gourdcarcgyB1042
Cucsa.250910Cucumber (Chinese Long) v3cgycucB392
Cucsa.250910Watermelon (97103) v2cgywmbB444
Cucsa.250910Watermelon (97103) v2cgywmbB454
Cucsa.250910Cucumber (Gy14) v1cgycgyB126
Cucsa.250910Cucumber (Gy14) v1cgycgyB132
Cucsa.250910Cucurbita maxima (Rimu)cgycmaB0710
Cucsa.250910Cucurbita maxima (Rimu)cgycmaB0711
Cucsa.250910Cucurbita maxima (Rimu)cgycmaB0718
Cucsa.250910Cucurbita moschata (Rifu)cgycmoB0704
Cucsa.250910Cucurbita moschata (Rifu)cgycmoB0711
Cucsa.250910Wild cucumber (PI 183967)cgycpiB386
Cucsa.250910Wild cucumber (PI 183967)cgycpiB388
Cucsa.250910Wild cucumber (PI 183967)cgycpiB391
Cucsa.250910Cucumber (Chinese Long) v2cgycuB368
Cucsa.250910Cucumber (Chinese Long) v2cgycuB370
Cucsa.250910Cucumber (Chinese Long) v2cgycuB372
Cucsa.250910Melon (DHL92) v3.5.1cgymeB428
Cucsa.250910Melon (DHL92) v3.5.1cgymeB431
Cucsa.250910Watermelon (Charleston Gray)cgywcgB445
Cucsa.250910Watermelon (Charleston Gray)cgywcgB451
Cucsa.250910Watermelon (97103) v1cgywmB480