Cucsa.250910 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.250910
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	A9
Location	scaffold02229 : 74163 .. 74758 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAACTCAAAAAAACAGAGATTAAAAGCAAAACAAAGGAGCAACTATGGCAGGCATCAAGTCTCTTGGGCAGCAGCAAGTTGTGATTCTGTCGTTGCTGGCTTTGATACTGGCTCAAGCACAGGCACAGCCTCAAGGCTGCTCAACTCAGCTCAGCAACTTAAATAGTTGTGCACCATTTGTGCTTCCTGGTGCTACTAACCCAAGCCCAGAGTGCTGTGGTGCACTTGGAGCTGTGCAACAAGATTGCCTTTGCAGCACCCTTAGAATTGCCTCCACTCTCCCTTCTCTTTGCCAACTTCCAACTCTCTCTTGTGGTCAGTCTTTTCTTTCTTTTTCTAACCATTTTTCTCAAGAATTGGCTGTTTCTGTTGAACGAAAGGTTTCTTTTTTCTTTTTGCTTCATTTCAGGTTCAAACTAGAAGAGAAGGCTGATGTGGAAATCACCACGATAAACGAAATGAATAGTAATAATAATGTTGTAGTTTTCCATTTGGTTTTGTTTGTGTTTCTCCTTTCCTGTTTGATCTGAGATCAATGATCTCAGAAGTCAGCTGGTTTCATTGAATAAAAAGGCACCCTTTACCTTTTTCTTCT

mRNA sequence

AGAACTCAAAAAAACAGAGATTAAAAGCAAAACAAAGGAGCAACTATGGCAGGCATCAAGTCTCTTGGGCAGCAGCAAGTTGTGATTCTGTCGTTGCTGGCTTTGATACTGGCTCAAGCACAGGCACAGCCTCAAGGCTGCTCAACTCAGCTCAGCAACTTAAATAGTTGTGCACCATTTGTGCTTCCTGGTGCTACTAACCCAAGCCCAGAGTGCTGTGGTGCACTTGGAGCTGTGCAACAAGATTGCCTTTGCAGCACCCTTAGAATTGCCTCCACTCTCCCTTCTCTTTGCCAACTTCCAACTCTCTCTTGTGGTTCAAACTAGAAGAGAAGGCTGATGTGGAAATCACCACGATAAACGAAATGAATAGTAATAATAATGTTGTAGTTTTCCATTTGGTTTTGTTTGTGTTTCTCCTTTCCTGTTTGATCTGAGATCAATGATCTCAGAAGTCAGCTGGTTTCATTGAATAAAAAGGCACCCTTTACCTTTTTCTTCT

Coding sequence (CDS)

ATGGCAGGCATCAAGTCTCTTGGGCAGCAGCAAGTTGTGATTCTGTCGTTGCTGGCTTTGATACTGGCTCAAGCACAGGCACAGCCTCAAGGCTGCTCAACTCAGCTCAGCAACTTAAATAGTTGTGCACCATTTGTGCTTCCTGGTGCTACTAACCCAAGCCCAGAGTGCTGTGGTGCACTTGGAGCTGTGCAACAAGATTGCCTTTGCAGCACCCTTAGAATTGCCTCCACTCTCCCTTCTCTTTGCCAACTTCCAACTCTCTCTTGTGGTTCAAACTAG

Protein sequence

MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN*

Homology

[Close]

BLAST of Cucsa.250910 vs. Swiss-Prot
Match: MEN8_SILLA (Protein MEN-8 OS=Silene latifolia GN=MEN-8 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.9e-19
Identity = 46/84 (54.76%), Postives = 60/84 (71.43%), Query Frame = 1


Query: 13  VILSLLALI--LAQAQAQPQGCSTQLSNLNSCAPFVLPGA--TNPSPECCGALGAVQQDC 72
           + L  LA++  L  ++AQ  GC++QL NLN CAP+V+PGA  TNPS ECC AL  V  DC
Sbjct: 17  IFLVALAILVQLKGSEAQAGGCASQLGNLNVCAPYVVPGAVNTNPSQECCAALSGVNHDC 76

Query: 73  LCSTLRIASTLPSLCQLPTLSCGS 93
           +C+TLR+AS LPS C L  L+CG+
Sbjct: 77  MCNTLRVASQLPSSCNLAALNCGN 100

[Close]

BLAST of Cucsa.250910 vs. Swiss-Prot
Match: FIL1_ANTMA (Stamen-specific protein FIL1 OS=Antirrhinum majus GN=FIL1 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.8e-18
Identity = 49/96 (51.04%), Postives = 67/96 (69.79%), Query Frame = 1


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQ----AQPQGCSTQLSNLNSCAPFVLPGA-TNPSP 60
          MA +KS     +V L +L +++AQ+Q    ++ Q CS  L+NLN+CAPFV+ GA T PS 
Sbjct: 1  MAAMKS-----IVPLVMLTVLVAQSQLITQSEAQTCSASLANLNACAPFVVLGAATTPSS 60

Query: 61 ECCGALGAVQQDCLCSTLRIASTLPSLCQLPTLSCG 92
          +CC AL +V  +CLC+TLRIAS +P+ C LP LSCG
Sbjct: 61 DCCTALQSVDHECLCNTLRIASRVPAQCNLPPLSCG 91

[Close]

BLAST of Cucsa.250910 vs. Swiss-Prot
Match: 108_SOLLC (Protein 108 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.0e-16
Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = 1


Query: 1   MAGIKSLGQQQV-----VILSLLALILAQAQA---QPQ-GCSTQLSNLNSCAPFVLPGAT 60
           MA +KS           ++L +L +I+ Q+Q    QPQ  C+  L+ LN CAPF++PG+ 
Sbjct: 1   MASVKSSSSSSSSSFISLLLLILLVIVLQSQVIECQPQQSCTASLTGLNVCAPFLVPGSP 60

Query: 61  NPSPECCGALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
             S ECC A+ ++  DC+C+T+RIA+ +P+ C LP LSC +N
Sbjct: 61  TASTECCNAVQSINHDCMCNTMRIAAQIPAQCNLPPLSCSAN 102

[Close]

BLAST of Cucsa.250910 vs. Swiss-Prot
Match: LIM2_LILLO (Protein LIM2 OS=Lilium longiflorum GN=LIM2 PE=3 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-14
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 1


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATN-PSPECCG 60
          MA +KSL    +V+L L AL     + + Q CS  +  L +C P+VLPG    PS +CC 
Sbjct: 1  MASMKSLATAILVVLLLAAL---SREGRSQNCSAAIGELMTCGPYVLPGNNGAPSEQCCS 60

Query: 61 ALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGS 93
          AL AV   CLC T+ I S+LP  C LP ++C S
Sbjct: 61 ALRAVNHGCLCETINIISSLPDHCSLPAVNCAS 90

[Close]

BLAST of Cucsa.250910 vs. Swiss-Prot
Match: A9_ARATH (Tapetum-specific protein A9 OS=Arabidopsis thaliana GN=A9 PE=2 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-14
Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = 1


Query: 12 VVILSLLALILAQAQAQ-----PQGCSTQLSNLNSCAPFVLPGATNPSPE--CCGALGAV 71
          V + SL A+++A   A       Q C  +LSN+  CAP +LPGA NP+    CC AL A 
Sbjct: 2  VSLKSLAAILVAMFLATGPTVLAQQCRDELSNVQVCAPLLLPGAVNPAANSNCCAALQAT 61

Query: 72 QQDCLCSTLRIASTLPSLCQLPTLSCG 92
           +DCLC+ LR A+TL SLC LP+  CG
Sbjct: 62 NKDCLCNALRAATTLTSLCNLPSFDCG 88

[Close]

BLAST of Cucsa.250910 vs. TrEMBL
Match: A0A0A0LBB5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G180390 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 2.4e-45
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA
Sbjct: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN
Sbjct: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 93

[Close]

BLAST of Cucsa.250910 vs. TrEMBL
Match: B9ID39_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s13570g PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-21
Identity = 55/94 (58.51%), Postives = 67/94 (71.28%), Query Frame = 1


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGA--TNPSPECC 60
          MA +KSL     V+L L AL +    A  Q C++QL+NLN CAPFV+PGA  TNP+ ECC
Sbjct: 1  MAALKSLSSPVAVLLLLTALAVQTQLAHSQQCTSQLNNLNVCAPFVVPGAANTNPNAECC 60

Query: 61 GALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGS 93
           AL AVQ DCLCSTL+I+S LPS C LP L+CG+
Sbjct: 61 NALEAVQHDCLCSTLQISSRLPSQCNLPPLTCGN 94

[Close]

BLAST of Cucsa.250910 vs. TrEMBL
Match: B9I4C6_POPTR (Tapetum-specific protein A9 OS=Populus trichocarpa GN=POPTR_0012s13560g PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-21
Identity = 53/94 (56.38%), Postives = 69/94 (73.40%), Query Frame = 1


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGA--TNPSPECC 60
          MA +KSL     ++L L+AL +    A  Q C++QL++LN CAPFV+PGA  TNPS +CC
Sbjct: 1  MASLKSLSSPAALLLLLIALAVQTQLAHSQICTSQLNSLNVCAPFVVPGAPNTNPSTDCC 60

Query: 61 GALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGS 93
           ALGAVQ DCLCSTL+IA+ LPS C LP ++CG+
Sbjct: 61 NALGAVQHDCLCSTLQIAARLPSQCNLPPITCGN 94

[Close]

BLAST of Cucsa.250910 vs. TrEMBL
Match: W9RWP6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015746 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.0e-20
Identity = 54/99 (54.55%), Postives = 70/99 (70.71%), Query Frame = 1


Query: 1  MAGIKSLGQQQVVILSLLALILAQ------AQAQPQGCSTQLSNLNSCAPFVLPGATNPS 60
          MA  KS+  Q  +++ L+  ++AQ      AQ  PQ C+++L+NLNSCAPFV+PGA NP 
Sbjct: 1  MASPKSVCYQAGLLVLLITALVAQQSHTAEAQVSPQ-CTSRLNNLNSCAPFVVPGAANPQ 60

Query: 61 P--ECCGALGAVQQDCLCSTLRIASTLPSLCQLPTLSCG 92
          P  +CC AL AV  DC+C+TLRIAS LPSLC +P LSCG
Sbjct: 61 PSAQCCAALQAVDHDCVCNTLRIASRLPSLCNIPPLSCG 98

[Close]

BLAST of Cucsa.250910 vs. TrEMBL
Match: A0A0D2RQG5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G046900 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-19
Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = 1


Query: 4  IKSLGQQQVVILSLLALILAQAQ-AQPQGCSTQLSNLNSCAPFVLPGAT--NPSPECCGA 63
          + SL  Q   IL LL +   Q Q A+ Q C+ +L+NLN CAPFV+PGAT  NPSP+CC A
Sbjct: 7  VASLSSQAAAILVLLTVAAVQTQTAKAQSCTPELTNLNVCAPFVVPGATQTNPSPDCCAA 66

Query: 64 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGS 93
          L +VQ DCLCSTL IAS LPS C LP L+ G+
Sbjct: 67 LQSVQHDCLCSTLSIASRLPSQCNLPPLTSGN 98

[Close]

BLAST of Cucsa.250910 vs. TAIR10
Match: AT5G52160.1 (AT5G52160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 94.7 bits (234), Expect = 3.1e-20
Identity = 46/87 (52.87%), Postives = 57/87 (65.52%), Query Frame = 1


Query: 6  SLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGA--TNPSPECCGALGA 65
          S+   +V ++  L L++A      Q C+ QLS LN C  FV+PGA  TNPS ECC AL A
Sbjct: 9  SMSFMKVAMMVALVLVVAATVVDGQSCNAQLSTLNVCGEFVVPGADRTNPSAECCNALEA 68

Query: 66 VQQDCLCSTLRIASTLPSLCQLPTLSC 91
          V  +CLC+T RIAS LPS C +PTLSC
Sbjct: 69 VPNECLCNTFRIASRLPSRCNIPTLSC 95

[Close]

BLAST of Cucsa.250910 vs. TAIR10
Match: AT5G62080.1 (AT5G62080.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 1.9e-17
Identity = 41/93 (44.09%), Postives = 55/93 (59.14%), Query Frame = 1


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MA  KS     V+ +  LA+   +   Q Q C   L+N+  CA  VLPG+  P+ ECC A
Sbjct: 4  MASFKSFAA--VLSVLFLAMTAIETVVQAQECGNDLANVQVCAAMVLPGSGRPNSECCAA 63

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          L +  +DCLC+ LR A++LPSLC LP + CG N
Sbjct: 64 LQSTNRDCLCNALRAATSLPSLCNLPPVDCGIN 94

[Close]

BLAST of Cucsa.250910 vs. TAIR10
Match: AT5G07230.1 (AT5G07230.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 79.3 bits (194), Expect = 1.4e-15
Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = 1


Query: 12 VVILSLLALILAQAQAQ-----PQGCSTQLSNLNSCAPFVLPGATNPSPE--CCGALGAV 71
          V + SL A+++A   A       Q C  +LSN+  CAP +LPGA NP+    CC AL A 
Sbjct: 2  VSLKSLAAILVAMFLATGPTVLAQQCRDELSNVQVCAPLLLPGAVNPAANSNCCAALQAT 61

Query: 72 QQDCLCSTLRIASTLPSLCQLPTLSCG 92
           +DCLC+ LR A+TL SLC LP+  CG
Sbjct: 62 NKDCLCNALRAATTLTSLCNLPSFDCG 88

[Close]

BLAST of Cucsa.250910 vs. NCBI nr
Match: gi|449446055|ref|XP_004140787.1| (PREDICTED: protein MEN-8 [Cucumis sativus])

HSP 1 Score: 189.1 bits (479), Expect = 3.5e-45
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA
Sbjct: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN
Sbjct: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 93

[Close]

BLAST of Cucsa.250910 vs. NCBI nr
Match: gi|659077392|ref|XP_008439180.1| (PREDICTED: protein MEN-8-like [Cucumis melo])

HSP 1 Score: 180.3 bits (456), Expect = 1.6e-42
Identity = 87/93 (93.55%), Postives = 90/93 (96.77%), Query Frame = 1


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MAG+KSLG+QQVVILSLLAL+L QAQAQPQGCSTQLSNLNSCAPFVLPGA NPSPECCGA
Sbjct: 1  MAGVKSLGKQQVVILSLLALMLVQAQAQPQGCSTQLSNLNSCAPFVLPGAPNPSPECCGA 60

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          LGAVQQDCLCSTLRIASTLPSLC LPTLSCGSN
Sbjct: 61 LGAVQQDCLCSTLRIASTLPSLCHLPTLSCGSN 93

[Close]

BLAST of Cucsa.250910 vs. NCBI nr
Match: gi|224122428|ref|XP_002318831.1| (Tapetum-specific protein A9 precursor [Populus trichocarpa])

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-21
Identity = 53/94 (56.38%), Postives = 69/94 (73.40%), Query Frame = 1


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGA--TNPSPECC 60
          MA +KSL     ++L L+AL +    A  Q C++QL++LN CAPFV+PGA  TNPS +CC
Sbjct: 1  MASLKSLSSPAALLLLLIALAVQTQLAHSQICTSQLNSLNVCAPFVVPGAPNTNPSTDCC 60

Query: 61 GALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGS 93
           ALGAVQ DCLCSTL+IA+ LPS C LP ++CG+
Sbjct: 61 NALGAVQHDCLCSTLQIAARLPSQCNLPPITCGN 94

[Close]

BLAST of Cucsa.250910 vs. NCBI nr
Match: gi|224134715|ref|XP_002321889.1| (hypothetical protein POPTR_0015s13570g [Populus trichocarpa])

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-21
Identity = 55/94 (58.51%), Postives = 67/94 (71.28%), Query Frame = 1


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGA--TNPSPECC 60
          MA +KSL     V+L L AL +    A  Q C++QL+NLN CAPFV+PGA  TNP+ ECC
Sbjct: 1  MAALKSLSSPVAVLLLLTALAVQTQLAHSQQCTSQLNNLNVCAPFVVPGAANTNPNAECC 60

Query: 61 GALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGS 93
           AL AVQ DCLCSTL+I+S LPS C LP L+CG+
Sbjct: 61 NALEAVQHDCLCSTLQISSRLPSQCNLPPLTCGN 94

[Close]

BLAST of Cucsa.250910 vs. NCBI nr
Match: gi|703141028|ref|XP_010107405.1| (hypothetical protein L484_015746 [Morus notabilis])

HSP 1 Score: 104.8 bits (260), Expect = 8.6e-20
Identity = 54/99 (54.55%), Postives = 70/99 (70.71%), Query Frame = 1


Query: 1  MAGIKSLGQQQVVILSLLALILAQ------AQAQPQGCSTQLSNLNSCAPFVLPGATNPS 60
          MA  KS+  Q  +++ L+  ++AQ      AQ  PQ C+++L+NLNSCAPFV+PGA NP 
Sbjct: 1  MASPKSVCYQAGLLVLLITALVAQQSHTAEAQVSPQ-CTSRLNNLNSCAPFVVPGAANPQ 60

Query: 61 P--ECCGALGAVQQDCLCSTLRIASTLPSLCQLPTLSCG 92
          P  +CC AL AV  DC+C+TLRIAS LPSLC +P LSCG
Sbjct: 61 PSAQCCAALQAVDHDCVCNTLRIASRLPSLCNIPPLSCG 98

The following BLAST results are available for this feature:

BLAST of Cucsa.250910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MEN8_SILLA	1.9e-19	54.76	Protein MEN-8 OS=Silene latifolia GN=MEN-8 PE=3 SV=1	[more]
FIL1_ANTMA	2.8e-18	51.04	Stamen-specific protein FIL1 OS=Antirrhinum majus GN=FIL1 PE=2 SV=1	[more]
108_SOLLC	2.0e-16	41.18	Protein 108 OS=Solanum lycopersicum PE=2 SV=1	[more]
LIM2_LILLO	1.1e-14	44.09	Protein LIM2 OS=Lilium longiflorum GN=LIM2 PE=3 SV=2	[more]
A9_ARATH	2.4e-14	47.13	Tapetum-specific protein A9 OS=Arabidopsis thaliana GN=A9 PE=2 SV=2	[more]

BLAST of Cucsa.250910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBB5_CUCSA	2.4e-45	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G180390 PE=4 SV=1	[more]
B9ID39_POPTR	1.4e-21	58.51	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s13570g PE=4 SV=1	[more]
B9I4C6_POPTR	1.4e-21	56.38	Tapetum-specific protein A9 OS=Populus trichocarpa GN=POPTR_0012s13560g PE=4 SV=...	[more]
W9RWP6_9ROSA	6.0e-20	54.55	Uncharacterized protein OS=Morus notabilis GN=L484_015746 PE=4 SV=1	[more]
A0A0D2RQG5_GOSRA	1.0e-19	57.61	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G046900 PE=4 SV=1	[more]

BLAST of Cucsa.250910 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52160.1	3.1e-20	52.87	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT5G62080.1	1.9e-17	44.09	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT5G07230.1	1.4e-15	47.13	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of Cucsa.250910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446055\|ref\|XP_004140787.1\|	3.5e-45	100.00	PREDICTED: protein MEN-8 [Cucumis sativus]	[more]
gi\|659077392\|ref\|XP_008439180.1\|	1.6e-42	93.55	PREDICTED: protein MEN-8-like [Cucumis melo]	[more]
gi\|224122428\|ref\|XP_002318831.1\|	2.1e-21	56.38	Tapetum-specific protein A9 precursor [Populus trichocarpa]	[more]
gi\|224134715\|ref\|XP_002321889.1\|	2.1e-21	58.51	hypothetical protein POPTR_0015s13570g [Populus trichocarpa]	[more]
gi\|703141028\|ref\|XP_010107405.1\|	8.6e-20	54.55	hypothetical protein L484_015746 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.250910.1	Cucsa.250910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 21..74 score: 2.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 32..90 score: 8.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 18..91 score: 3.66
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 36..74 score: 9.
None	No IPR available	PANTHER	PTHR35501	FAMILY NOT NAMED	coord: 2..93 score: 1.6
None	No IPR available	PANTHER	PTHR35501:SF2	PROTEASE INHIBITOR/SEED STORAGE/LIPID TRANSFER PROTEIN (LTP) FAMILY PROTEIN-RELATED	coord: 2..93 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.250910	Cla006201	Watermelon (97103) v1	cgywmB479
Cucsa.250910	Csa3G180390	Cucumber (Chinese Long) v2	cgycuB366
Cucsa.250910	MELO3C006883	Melon (DHL92) v3.5.1	cgymeB439
Cucsa.250910	CSPI03G16700	Wild cucumber (PI 183967)	cgycpiB383
Cucsa.250910	CmaCh18G012320	Cucurbita maxima (Rimu)	cgycmaB0716
Cucsa.250910	CmoCh18G012550	Cucurbita moschata (Rifu)	cgycmoB0709
Cucsa.250910	Lsi05G012540	Bottle gourd (USVL1VR-Ls)	cgylsiB416
Cucsa.250910	MELO3C006883.2	Melon (DHL92) v3.6.1	cgymedB432
Cucsa.250910	CsaV3_3G016880	Cucumber (Chinese Long) v3	cgycucB387
Cucsa.250910	Cla97C05G089860	Watermelon (97103) v2	cgywmbB452
Cucsa.250910	Bhi01G000987	Wax gourd	cgywgoB516
Cucsa.250910	Carg22084	Silver-seed gourd	carcgyB0829

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.250910	Silver-seed gourd	carcgyB1042
Cucsa.250910	Cucumber (Chinese Long) v3	cgycucB392
Cucsa.250910	Watermelon (97103) v2	cgywmbB444
Cucsa.250910	Watermelon (97103) v2	cgywmbB454
Cucsa.250910	Cucumber (Gy14) v1	cgycgyB126
Cucsa.250910	Cucumber (Gy14) v1	cgycgyB132
Cucsa.250910	Cucurbita maxima (Rimu)	cgycmaB0710
Cucsa.250910	Cucurbita maxima (Rimu)	cgycmaB0711
Cucsa.250910	Cucurbita maxima (Rimu)	cgycmaB0718
Cucsa.250910	Cucurbita moschata (Rifu)	cgycmoB0704
Cucsa.250910	Cucurbita moschata (Rifu)	cgycmoB0711
Cucsa.250910	Wild cucumber (PI 183967)	cgycpiB386
Cucsa.250910	Wild cucumber (PI 183967)	cgycpiB388
Cucsa.250910	Wild cucumber (PI 183967)	cgycpiB391
Cucsa.250910	Cucumber (Chinese Long) v2	cgycuB368
Cucsa.250910	Cucumber (Chinese Long) v2	cgycuB370
Cucsa.250910	Cucumber (Chinese Long) v2	cgycuB372
Cucsa.250910	Melon (DHL92) v3.5.1	cgymeB428
Cucsa.250910	Melon (DHL92) v3.5.1	cgymeB431
Cucsa.250910	Watermelon (Charleston Gray)	cgywcgB445
Cucsa.250910	Watermelon (Charleston Gray)	cgywcgB451
Cucsa.250910	Watermelon (97103) v1	cgywmB480
Cucsa.250910	Cucurbita pepo (Zucchini)	cgycpeB0668
Cucsa.250910	Cucurbita pepo (Zucchini)	cgycpeB0673
Cucsa.250910	Cucurbita pepo (Zucchini)	cgycpeB0686
Cucsa.250910	Bottle gourd (USVL1VR-Ls)	cgylsiB411
Cucsa.250910	Melon (DHL92) v3.6.1	cgymedB422
Cucsa.250910	Melon (DHL92) v3.6.1	cgymedB426