Carg22084 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22084
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	stamen-specific protein FIL1-like
Location	Cucurbita_argyrosperma_scaffold_229 : 47028 .. 47300 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGGAACCAAGTCTCATGGGGTGCAGCAAGTTATATTGCTCTTGTTGGTGTCTGTTCTGCTGTGGCAATCACAGGCACAGGCGCAAAGCTGCTCAACTCAGCTCAGCAACCTTAATGGGTGTGCACCTTTTGTGCTTCCTGGTGCCAGTAACCCAAGCCCAGAGTGCTGTGCAGCGCTTGGAGCCGTGCAGCAGGATTGCCTGTGCAGCACCCTCAGAATTTCCTCCACTCTGCCTTCGCTTTGCCGCCTTCCACCTCTCTCTTGTGGT

mRNA sequence

ATGGCAGGAACCAAGTCTCATGGGGTGCAGCAAGTTATATTGCTCTTGTTGGTGTCTGTTCTGCTGTGGCAATCACAGGCACAGGCGCAAAGCTGCTCAACTCAGCTCAGCAACCTTAATGGGTGTGCACCTTTTGTGCTTCCTGGTGCCAGTAACCCAAGCCCAGAGTGCTGTGCAGCGCTTGGAGCCGTGCAGCAGGATTGCCTGTGCAGCACCCTCAGAATTTCCTCCACTCTGCCTTCGCTTTGCCGCCTTCCACCTCTCTCTTGTGGT

Coding sequence (CDS)

ATGGCAGGAACCAAGTCTCATGGGGTGCAGCAAGTTATATTGCTCTTGTTGGTGTCTGTTCTGCTGTGGCAATCACAGGCACAGGCGCAAAGCTGCTCAACTCAGCTCAGCAACCTTAATGGGTGTGCACCTTTTGTGCTTCCTGGTGCCAGTAACCCAAGCCCAGAGTGCTGTGCAGCGCTTGGAGCCGTGCAGCAGGATTGCCTGTGCAGCACCCTCAGAATTTCCTCCACTCTGCCTTCGCTTTGCCGCCTTCCACCTCTCTCTTGTGGT

Protein sequence

MAGTKSHGVQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSPECCAALGAVQQDCLCSTLRISSTLPSLCRLPPLSCG

Homology

[Close]

BLAST of Carg22084 vs. NCBI nr
Match: XP_022968421.1 (stamen-specific protein FIL1 [Cucurbita maxima] >XP_023542033.1 stamen-specific protein FIL1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.0 bits (463), Expect = 4.7e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MAGTKSHGVQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSPECCAA 60
          MAGTKSHGVQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSPECCAA
Sbjct: 1  MAGTKSHGVQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSPECCAA 60

Query: 61 LGAVQQDCLCSTLRISSTLPSLCRLPPLSCG 92
          LGAVQQDCLCSTLRISSTLPSLCRLPPLSCG
Sbjct: 61 LGAVQQDCLCSTLRISSTLPSLCRLPPLSCG 91

[Close]

BLAST of Carg22084 vs. NCBI nr
Match: XP_022945428.1 (stamen-specific protein FIL1 [Cucurbita moschata])

HSP 1 Score: 179.5 bits (454), Expect = 5.2e-42
Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MAGTKSHGVQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSPECCAA 60
          MAG KSHGVQQVILLLLV+VLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSPECCAA
Sbjct: 1  MAGIKSHGVQQVILLLLVTVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSPECCAA 60

Query: 61 LGAVQQDCLCSTLRISSTLPSLCRLPPLSCG 92
          LGAVQQDCLCSTLRISSTLPSLCRLPPLSCG
Sbjct: 61 LGAVQQDCLCSTLRISSTLPSLCRLPPLSCG 91

[Close]

BLAST of Carg22084 vs. NCBI nr
Match: XP_004140787.1 (PREDICTED: protein MEN-8 [Cucumis sativus] >KGN57351.1 hypothetical protein Csa_3G180390 [Cucumis sativus])

HSP 1 Score: 145.6 bits (366), Expect = 8.3e-32
Identity = 71/91 (78.02%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 1  MAGTKSHGVQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSPECCAA 60
          MAG KS G QQV++L L++++L Q+QAQ Q CSTQLSNLN CAPFVLPGA+NPSPECC A
Sbjct: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60

Query: 61 LGAVQQDCLCSTLRISSTLPSLCRLPPLSCG 92
          LGAVQQDCLCSTLRI+STLPSLC+LP LSCG
Sbjct: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCG 91

[Close]

BLAST of Carg22084 vs. NCBI nr
Match: XP_008439180.1 (PREDICTED: protein MEN-8 [Cucumis melo])

HSP 1 Score: 144.8 bits (364), Expect = 1.4e-31
Identity = 71/91 (78.02%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 1  MAGTKSHGVQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSPECCAA 60
          MAG KS G QQV++L L++++L Q+QAQ Q CSTQLSNLN CAPFVLPGA NPSPECC A
Sbjct: 1  MAGVKSLGKQQVVILSLLALMLVQAQAQPQGCSTQLSNLNSCAPFVLPGAPNPSPECCGA 60

Query: 61 LGAVQQDCLCSTLRISSTLPSLCRLPPLSCG 92
          LGAVQQDCLCSTLRI+STLPSLC LP LSCG
Sbjct: 61 LGAVQQDCLCSTLRIASTLPSLCHLPTLSCG 91

[Close]

BLAST of Carg22084 vs. NCBI nr
Match: XP_022140803.1 (stamen-specific protein FIL1-like [Momordica charantia])

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-25
Identity = 65/89 (73.03%), Postives = 74/89 (83.15%), Query Frame = 0


Query: 9  VQQVILLLLVSVLLWQS-----QAQAQSCSTQLSNLNGCAPFVLPG-ASNPSPECCAALG 68
          ++QV ++ LV+V++ QS     Q QAQSCS QLSNLNGCAPFVLPG ASNPSPECC AL 
Sbjct: 5  MKQVAVVFLVAVVMGQSWLGQAQGQAQSCSAQLSNLNGCAPFVLPGAASNPSPECCGALQ 64

Query: 69 AVQQDCLCSTLRISSTLPSLCRLPPLSCG 92
           VQQDCLCST+RI+STLPSLC LPPLSCG
Sbjct: 65 GVQQDCLCSTIRIASTLPSLCHLPPLSCG 93

[Close]

BLAST of Carg22084 vs. TAIR10
Match: AT5G62080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 85.1 bits (209), Expect = 2.4e-17
Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 0


Query: 1  MAGTKSHGVQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSPECCAA 60
          MA  KS      +L L ++ +  ++  QAQ C   L+N+  CA  VLPG+  P+ ECCAA
Sbjct: 4  MASFKSFAAVLSVLFLAMTAI--ETVVQAQECGNDLANVQVCAAMVLPGSGRPNSECCAA 63

Query: 61 LGAVQQDCLCSTLRISSTLPSLCRLPPLSCG 92
          L +  +DCLC+ LR +++LPSLC LPP+ CG
Sbjct: 64 LQSTNRDCLCNALRAATSLPSLCNLPPVDCG 92

[Close]

BLAST of Carg22084 vs. TAIR10
Match: AT5G52160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 79.7 bits (195), Expect = 1.0e-15
Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 6  SHGVQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGA--SNPSPECCAALGA 65
          S    +V +++ + +++  +    QSC+ QLS LN C  FV+PGA  +NPS ECC AL A
Sbjct: 9  SMSFMKVAMMVALVLVVAATVVDGQSCNAQLSTLNVCGEFVVPGADRTNPSAECCNALEA 68

Query: 66 VQQDCLCSTLRISSTLPSLCRLPPLSC 91
          V  +CLC+T RI+S LPS C +P LSC
Sbjct: 69 VPNECLCNTFRIASRLPSRCNIPTLSC 95

[Close]

BLAST of Carg22084 vs. TAIR10
Match: AT5G07230.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 9.5e-14
Identity = 38/85 (44.71%), Postives = 51/85 (60.00%), Query Frame = 0


Query: 9  VQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNP--SPECCAALGAVQQ 68
          ++ +  +L+   L       AQ C  +LSN+  CAP +LPGA NP  +  CCAAL A  +
Sbjct: 4  LKSLAAILVAMFLATGPTVLAQQCRDELSNVQVCAPLLLPGAVNPAANSNCCAALQATNK 63

Query: 69 DCLCSTLRISSTLPSLCRLPPLSCG 92
          DCLC+ LR ++TL SLC LP   CG
Sbjct: 64 DCLCNALRAATTLTSLCNLPSFDCG 88

[Close]

BLAST of Carg22084 vs. Swiss-Prot
Match: sp|O24356|MEN8_SILLA (Protein MEN-8 OS=Silene latifolia OX=37657 GN=MEN-8 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.9e-18
Identity = 45/81 (55.56%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 13 ILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGA--SNPSPECCAALGAVQQDCLC 72
          ++ L + V L  S+AQA  C++QL NLN CAP+V+PGA  +NPS ECCAAL  V  DC+C
Sbjct: 19 LVALAILVQLKGSEAQAGGCASQLGNLNVCAPYVVPGAVNTNPSQECCAALSGVNHDCMC 78

Query: 73 STLRISSTLPSLCRLPPLSCG 92
          +TLR++S LPS C L  L+CG
Sbjct: 79 NTLRVASQLPSSCNLAALNCG 99

[Close]

BLAST of Carg22084 vs. Swiss-Prot
Match: sp|Q38737|FIL1_ANTMA (Stamen-specific protein FIL1 OS=Antirrhinum majus OX=4151 GN=FIL1 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.0e-17
Identity = 45/88 (51.14%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 9  VQQVILLLLVSVLLWQS----QAQAQSCSTQLSNLNGCAPFVLPG-ASNPSPECCAALGA 68
          ++ ++ L++++VL+ QS    Q++AQ+CS  L+NLN CAPFV+ G A+ PS +CC AL +
Sbjct: 4  MKSIVPLVMLTVLVAQSQLITQSEAQTCSASLANLNACAPFVVLGAATTPSSDCCTALQS 63

Query: 69 VQQDCLCSTLRISSTLPSLCRLPPLSCG 92
          V  +CLC+TLRI+S +P+ C LPPLSCG
Sbjct: 64 VDHECLCNTLRIASRVPAQCNLPPLSCG 91

[Close]

BLAST of Carg22084 vs. Swiss-Prot
Match: sp|Q43495|108_SOLLC (Protein 108 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 9.1e-14
Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 0


Query: 30 QSCSTQLSNLNGCAPFVLPGASNPSPECCAALGAVQQDCLCSTLRISSTLPSLCRLPPLS 89
          QSC+  L+ LN CAPF++PG+   S ECC A+ ++  DC+C+T+RI++ +P+ C LPPLS
Sbjct: 39 QSCTASLTGLNVCAPFLVPGSPTASTECCNAVQSINHDCMCNTMRIAAQIPAQCNLPPLS 98

Query: 90 C 91
          C
Sbjct: 99 C 99

[Close]

BLAST of Carg22084 vs. Swiss-Prot
Match: sp|Q05772|A9_BRANA (Tapetum-specific protein A9 OS=Brassica napus OX=3708 GN=A9 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.5e-13
Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0


Query: 13 ILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSP--ECCAALGAVQQDCLC 72
          ++ L +S L      +AQ C   LSN+  CAP VLPGA NP+P   CC AL A  +DC+C
Sbjct: 13 VMFLAMSALETVPMVRAQQCLDNLSNMQVCAPLVLPGAVNPAPNSNCCIALQATNKDCIC 72

Query: 73 STLRISSTLPSLCRLPPLSCG 92
          + LR ++T  + C LP L CG
Sbjct: 73 NALRAATTFTTTCNLPSLDCG 93

[Close]

BLAST of Carg22084 vs. Swiss-Prot
Match: sp|Q00762|A9_ARATH (Tapetum-specific protein A9 OS=Arabidopsis thaliana OX=3702 GN=A9 PE=2 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 1.7e-12
Identity = 38/85 (44.71%), Postives = 51/85 (60.00%), Query Frame = 0


Query: 9  VQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNP--SPECCAALGAVQQ 68
          ++ +  +L+   L       AQ C  +LSN+  CAP +LPGA NP  +  CCAAL A  +
Sbjct: 4  LKSLAAILVAMFLATGPTVLAQQCRDELSNVQVCAPLLLPGAVNPAANSNCCAALQATNK 63

Query: 69 DCLCSTLRISSTLPSLCRLPPLSCG 92
          DCLC+ LR ++TL SLC LP   CG
Sbjct: 64 DCLCNALRAATTLTSLCNLPSFDCG 88

[Close]

BLAST of Carg22084 vs. TrEMBL
Match: tr|A0A0A0LBB5|A0A0A0LBB5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180390 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 5.5e-32
Identity = 71/91 (78.02%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 1  MAGTKSHGVQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSPECCAA 60
          MAG KS G QQV++L L++++L Q+QAQ Q CSTQLSNLN CAPFVLPGA+NPSPECC A
Sbjct: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60

Query: 61 LGAVQQDCLCSTLRISSTLPSLCRLPPLSCG 92
          LGAVQQDCLCSTLRI+STLPSLC+LP LSCG
Sbjct: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCG 91

[Close]

BLAST of Carg22084 vs. TrEMBL
Match: tr|A0A1S3AY46|A0A1S3AY46_CUCME (protein MEN-8 OS=Cucumis melo OX=3656 GN=LOC103484052 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 9.4e-32
Identity = 71/91 (78.02%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 1  MAGTKSHGVQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSPECCAA 60
          MAG KS G QQV++L L++++L Q+QAQ Q CSTQLSNLN CAPFVLPGA NPSPECC A
Sbjct: 1  MAGVKSLGKQQVVILSLLALMLVQAQAQPQGCSTQLSNLNSCAPFVLPGAPNPSPECCGA 60

Query: 61 LGAVQQDCLCSTLRISSTLPSLCRLPPLSCG 92
          LGAVQQDCLCSTLRI+STLPSLC LP LSCG
Sbjct: 61 LGAVQQDCLCSTLRIASTLPSLCHLPTLSCG 91

[Close]

BLAST of Carg22084 vs. TrEMBL
Match: tr|A0A2P5BPY3|A0A2P5BPY3_PARAD (FHY3/FAR1 family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_220730 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.2e-20
Identity = 53/93 (56.99%), Postives = 70/93 (75.27%), Query Frame = 0


Query: 1  MAGTKSHGVQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSP--ECC 60
          MAG KS     V+  L+++V++    A+AQ CS+QLSNLN CAPFV+PG++NP P   CC
Sbjct: 1  MAGLKSPTFFHVV--LVIAVVVMAQTAEAQVCSSQLSNLNVCAPFVVPGSANPQPSSNCC 60

Query: 61 AALGAVQQDCLCSTLRISSTLPSLCRLPPLSCG 92
          +ALGAV  DCLC+TLRI+S LP+LC +P L+CG
Sbjct: 61 SALGAVNHDCLCNTLRIASRLPALCNIPALACG 91

[Close]

BLAST of Carg22084 vs. TrEMBL
Match: tr|B9ID39|B9ID39_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G139100v3 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.8e-19
Identity = 54/93 (58.06%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 1  MAGTKSHGVQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGA--SNPSPECC 60
          MA  KS      +LLLL ++ +    A +Q C++QL+NLN CAPFV+PGA  +NP+ ECC
Sbjct: 1  MAALKSLSSPVAVLLLLTALAVQTQLAHSQQCTSQLNNLNVCAPFVVPGAANTNPNAECC 60

Query: 61 AALGAVQQDCLCSTLRISSTLPSLCRLPPLSCG 92
           AL AVQ DCLCSTL+ISS LPS C LPPL+CG
Sbjct: 61 NALEAVQHDCLCSTLQISSRLPSQCNLPPLTCG 93

[Close]

BLAST of Carg22084 vs. TrEMBL
Match: tr|W9RWP6|W9RWP6_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015746 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.3e-19
Identity = 55/98 (56.12%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 1  MAGTKSHGVQQVILLLLVSVLLWQSQ--AQAQ---SCSTQLSNLNGCAPFVLPGASNPSP 60
          MA  KS   Q  +L+LL++ L+ Q    A+AQ    C+++L+NLN CAPFV+PGA+NP P
Sbjct: 1  MASPKSVCYQAGLLVLLITALVAQQSHTAEAQVSPQCTSRLNNLNSCAPFVVPGAANPQP 60

Query: 61 --ECCAALGAVQQDCLCSTLRISSTLPSLCRLPPLSCG 92
            +CCAAL AV  DC+C+TLRI+S LPSLC +PPLSCG
Sbjct: 61 SAQCCAALQAVDHDCVCNTLRIASRLPSLCNIPPLSCG 98

The following BLAST results are available for this feature:

BLAST of Carg22084 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968421.1	4.7e-43	100.00	stamen-specific protein FIL1 [Cucurbita maxima] >XP_023542033.1 stamen-specific ...	[more]
XP_022945428.1	5.2e-42	97.80	stamen-specific protein FIL1 [Cucurbita moschata]	[more]
XP_004140787.1	8.3e-32	78.02	PREDICTED: protein MEN-8 [Cucumis sativus] >KGN57351.1 hypothetical protein Csa_...	[more]
XP_008439180.1	1.4e-31	78.02	PREDICTED: protein MEN-8 [Cucumis melo]	[more]
XP_022140803.1	1.5e-25	73.03	stamen-specific protein FIL1-like [Momordica charantia]	[more]

BLAST of Carg22084 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G62080.1	2.4e-17	45.05	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G52160.1	1.0e-15	47.13	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G07230.1	9.5e-14	44.71	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

BLAST of Carg22084 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O24356\|MEN8_SILLA	7.9e-18	55.56	Protein MEN-8 OS=Silene latifolia OX=37657 GN=MEN-8 PE=3 SV=1	[more]
sp\|Q38737\|FIL1_ANTMA	1.0e-17	51.14	Stamen-specific protein FIL1 OS=Antirrhinum majus OX=4151 GN=FIL1 PE=2 SV=1	[more]
sp\|Q43495\|108_SOLLC	9.1e-14	50.82	Protein 108 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
sp\|Q05772\|A9_BRANA	4.5e-13	45.68	Tapetum-specific protein A9 OS=Brassica napus OX=3708 GN=A9 PE=2 SV=1	[more]
sp\|Q00762\|A9_ARATH	1.7e-12	44.71	Tapetum-specific protein A9 OS=Arabidopsis thaliana OX=3702 GN=A9 PE=2 SV=2	[more]

BLAST of Carg22084 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LBB5\|A0A0A0LBB5_CUCSA	5.5e-32	78.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180390 PE=4 SV=1	[more]
tr\|A0A1S3AY46\|A0A1S3AY46_CUCME	9.4e-32	78.02	protein MEN-8 OS=Cucumis melo OX=3656 GN=LOC103484052 PE=4 SV=1	[more]
tr\|A0A2P5BPY3\|A0A2P5BPY3_PARAD	8.2e-20	56.99	FHY3/FAR1 family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_220730 PE=4 SV=1	[more]
tr\|B9ID39\|B9ID39_POPTR	1.8e-19	58.06	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G139100v3 PE=...	[more]
tr\|W9RWP6\|W9RWP6_9ROSA	5.3e-19	56.12	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015746 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22084-RA	Carg22084-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 32..90 e-value: 8.8E-7 score: 38.5
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 16..73 e-value: 3.1E-6 score: 27.1
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 28..90 e-value: 1.9E-7 score: 32.8
None	No IPR available	PANTHER	PTHR35501	FAMILY NOT NAMED	coord: 1..91
None	No IPR available	PANTHER	PTHR35501:SF2	PROTEASE INHIBITOR/SEED STORAGE/LIPID TRANSFER PROTEIN LTP FAMILY PROTEIN-RELATED	coord: 1..91
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 29..91

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22084	Cla006201	Watermelon (97103) v1	carwmB0736
Carg22084	Csa3G180390	Cucumber (Chinese Long) v2	carcuB0754
Carg22084	MELO3C006883	Melon (DHL92) v3.5.1	carmeB0732
Carg22084	CSPI03G16700	Wild cucumber (PI 183967)	carcpiB0771
Carg22084	Cucsa.250910	Cucumber (Gy14) v1	carcgyB0829
Carg22084	CmaCh18G012320	Cucurbita maxima (Rimu)	carcmaB1032
Carg22084	CmoCh18G012550	Cucurbita moschata (Rifu)	carcmoB1003
Carg22084	Lsi05G012540	Bottle gourd (USVL1VR-Ls)	carlsiB675
Carg22084	MELO3C006883.2	Melon (DHL92) v3.6.1	carmedB0743
Carg22084	CsaV3_3G016880	Cucumber (Chinese Long) v3	carcucB0774
Carg22084	Cla97C05G089860	Watermelon (97103) v2	carwmbB0772
Carg22084	Bhi01G000987	Wax gourd	carwgoB0871

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22084	Cucurbita maxima (Rimu)	carcmaB1031
Carg22084	Cucurbita moschata (Rifu)	carcmoB1002
Carg22084	Cucurbita pepo (Zucchini)	carcpeB1038
Carg22084	Cucurbita pepo (Zucchini)	carcpeB1039
Carg22084	Watermelon (Charleston Gray)	carwcgB0715
Carg22084	Watermelon (97103) v2	carwmbB0773
Carg22084	Wax gourd	carwgoB0872
Carg22084	Cucumber (Gy14) v2	carcgybB0733