Cucsa.250550 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.250550
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
Description50S ribosomal protein L25, putative
Locationscaffold02219 : 659262 .. 661996 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATATCGGGCCCAATTACCTCAAAGTACAATTTGCCCAAACTTCTTTAGGTCCAAAGGCCCATACTCAAAACCCCCAAACTTCACGGTGCATAAACCCTCACAGCACATAGAGCTCCGCTTAGCTCCTCGCCATTCCGGCTGCCATTGTCCAGACTTCCGACCGATCATGGCCAACTGGTGGCGCTCCGCCAGAACGAACCTCAGGTTGGCGGCATTTTCAGGAACTAAATCGGAATCGTTTCCATTTTCATCATTTCGAGCTGCTTACCATACGATCCAAGCAATTCCTAGAGAGTGCAGCGGCCGCAAAATTTCGAGCAAAGATAGAGCTCAAGGAAGAATACCCGCTGTCGTTTTCAGTCAACAAATCCTTGAGAAAAACTCAGTCCACGGATCGCCGTCGCGAAAGCATCTGCTCACTACAGAGCGAAAGCAAATCCACTCCATTCTCAAATCCGTTGAGCTTCCTTTCTTTTGCTCCACTAGGTTCAAACTTCAGATTCGTGCTGGTTCCGGGTCTTCCGTACTTCTTGAATCAGGATCCATCCTTCCAATTAAAGTAAGCCATTCACTTCTCTCTACCTGTTTGTTTATGTTTAATTCAACTTGATTTTTTCCTTTTCATTTCTTGTTATGGAGTAACTCCTTGAGTTTTTTTCAGATTCATAGGAATGAAGAGACAGGGAAGATCTTCAATATTGTGTTTGTATGGGCTGATGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTTAAAGGCGAAGAGGCTTGCCCTGGTCTTCAGAAAGGTAACCAATGAAGAAATGCTTATTTAATTCCCTAGCTGACTTAGTCGTGTTCTTGATTTTGTTAATATTGAATTAATTTGAGCTATTGCAAGAAATTGGGAAATTAGTTTATTGAATCCAGAAAATATGTTGAGCCTTTTTTGCACTTCTATAATTGCAAAGATGACACCGAGGTTTTGTCTTTCGAGAAGCAAAAAATTTGGTCCTATGATTCTTACTTTTCCTCACTATATGAAATGTGCACAACCCACTTTGGAAAAAATACACCTAGAAACTGTGCAATGTTTAATCATCTTTGATCTTTCTTTCCTCCTTGATTATTCGAAGATTTTCTGTTTTCTTTCTGTCTAAGGACCCCAAAGAAAGTAGCTTTAAACACTTATTGATCCACTGAACTTTAGGAGTGACATAAAAGTGTTGTGTTTAGCTATTAAATTATCTACTTCAGCAATCCTGAAGACTTAAGACACTCTCCGAGACACTGAACATTGGGGGAAAATAGAGAATACAAGGGGGTGTACGACTACTAAGTGACTTTACCCAAGCTTTCCATAACTAGCTGATCTTACTTGATTTGTGTCTGTCCCACGAAAAGTAGAATGTTCTAGAATAATCAGTATAATGGTATGGTTAACCTTTATGAAACTTTTCTATTGATGTGCAGAGCAGCTAAAGGAGGAAATTTCTTACATATTTTTAGCTGAAAATTTCTTTCATTCTTAACGTGAAGTCTTTTTGGACCATTTTTGTGAGCCATGTTAGAACCTTTTAGTTATTAGTGATTAGCAAATCTTGTGATGTATGGATGAAGTTGTTCCTTTGGGGAATATATGACATTTCCGAAGTTCAAACTATGAACTTTGGTCAAACTTATAGGGGCATGACCTTGATAAAGGGCTAATAAATCATGAGTTTAGTCCATGATGGTGGAACCTACCTAGGATTTAATATTCTATGAGTTATTTTGACACTCAAATGTTGTAGGTTCAGGGGATCTTGGAAAAAAACCATGGTCAAACATAGGTAGATGAACCACCATTAGCTTCTTCACCTTGTTCTATAATGGTACCTAGTTCCTGCAAGGCTTTCTCAAATTTGCTGCAACAGTTCGGTTTATGTTTATGACATTTAAACATGGTAGATGATAAAAGATTTTGTTCTCTATCTGATCGTAGTTAGGATGATAAAGAATTGGAACTTAAAAGTCTACAATCTTGCAAAACTTGTATGGTGATCCATGTTTTCCTTTAGTAGTTTTCTTATCTGAATCTTTGTCATCCTGTCAAATGTAGTTTTGAAATCTTACTTTTAATTGTGGAAAACAGGAGGTCAACTGAACAAGATAAGAACTAGCCTGAAATATCTTTGCCCGGCCGAACACATTCCCTCAAAGATTGAGGTGGATGTAAGTAATCTGGACATTGGGGATAGAATTTTCATTCGCGATGTAGACGTCCATTCTTCTATGAAGCTACTTAGCAAGAACGAAGTAATGCCTATATGTAAAATAGTCACAATCAAGTCTGAAACTGCAAACACAGAAACTTCAGCAACTTCAGAAACATCAGAAACTTCATGACGGCAGATTCGTTGGAAACATATTTGTGTTTAGAAGCTTTTGGTCTACTAAACAACTGATGATTGAAGAGACCAAAGACTAACATCTACTTGGCATCAAGTTCGTCCTCTATTTGGAAGATGTTATGTGTTTAAGATCTAAATTTGTCATGTTCTTTGTATAAATTTGGAACTGTTTTTCTCTATTTCGATTCCTACCGACTTTTGATGCACTAGCTGAGAATTTTGATAAAGCTCAGGTTCACATGAGATCTCTTTCTTGCTGGATTAAAAGTATCGACAGAAGATAAATGCTTTTTTAAAAGAGATTATTGCCTCAATCATTATTGTTGGAAGAATAAAGAACAATGATGCCCCAGAGTATA

mRNA sequence

GATATCGGGCCCAATTACCTCAAAGTACAATTTGCCCAAACTTCTTTAGGTCCAAAGGCCCATACTCAAAACCCCCAAACTTCACGGTGCATAAACCCTCACAGCACATAGAGCTCCGCTTAGCTCCTCGCCATTCCGGCTGCCATTGTCCAGACTTCCGACCGATCATGGCCAACTGGTGGCGCTCCGCCAGAACGAACCTCAGGTTGGCGGCATTTTCAGGAACTAAATCGGAATCGTTTCCATTTTCATCATTTCGAGCTGCTTACCATACGATCCAAGCAATTCCTAGAGAGTGCAGCGGCCGCAAAATTTCGAGCAAAGATAGAGCTCAAGGAAGAATACCCGCTGTCGTTTTCAGTCAACAAATCCTTGAGAAAAACTCAGTCCACGGATCGCCGTCGCGAAAGCATCTGCTCACTACAGAGCGAAAGCAAATCCACTCCATTCTCAAATCCGTTGAGCTTCCTTTCTTTTGCTCCACTAGGTTCAAACTTCAGATTCGTGCTGGTTCCGGGTCTTCCGTACTTCTTGAATCAGGATCCATCCTTCCAATTAAAATTCATAGGAATGAAGAGACAGGGAAGATCTTCAATATTGTGTTTGTATGGGCTGATGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTTAAAGGCGAAGAGGCTTGCCCTGGTCTTCAGAAAGGAGGTCAACTGAACAAGATAAGAACTAGCCTGAAATATCTTTGCCCGGCCGAACACATTCCCTCAAAGATTGAGGTGGATGTAAGTAATCTGGACATTGGGGATAGAATTTTCATTCGCGATGTAGACGTCCATTCTTCTATGAAGCTACTTAGCAAGAACGAAGTAATGCCTATATGTAAAATAGTCACAATCAAGTCTGAAACTGCAAACACAGAAACTTCAGCAACTTCAGAAACATCAGAAACTTCATGACGGCAGATTCGTTGGAAACATATTTGTGTTTAGAAGCTTTTGGTCTACTAAACAACTGATGATTGAAGAGACCAAAGACTAACATCTACTTGGCATCAAGTTCGTCCTCTATTTGGAAGATGTTATGTGTTTAAGATCTAAATTTGTCATGTTCTTTGTATAAATTTGGAACTGTTTTTCTCTATTTCGATTCCTACCGACTTTTGATGCACTAGCTGAGAATTTTGATAAAGCTCAGGTTCACATGAGATCTCTTTCTTGCTGGATTAAAAGTATCGACAGAAGATAAATGCTTTTTTAAAAGAGATTATTGCCTCAATCATTATTGTTGGAAGAATAAAGAACAATGATGCCCCAGAGTATA

Coding sequence (CDS)

ATGGCCAACTGGTGGCGCTCCGCCAGAACGAACCTCAGGTTGGCGGCATTTTCAGGAACTAAATCGGAATCGTTTCCATTTTCATCATTTCGAGCTGCTTACCATACGATCCAAGCAATTCCTAGAGAGTGCAGCGGCCGCAAAATTTCGAGCAAAGATAGAGCTCAAGGAAGAATACCCGCTGTCGTTTTCAGTCAACAAATCCTTGAGAAAAACTCAGTCCACGGATCGCCGTCGCGAAAGCATCTGCTCACTACAGAGCGAAAGCAAATCCACTCCATTCTCAAATCCGTTGAGCTTCCTTTCTTTTGCTCCACTAGGTTCAAACTTCAGATTCGTGCTGGTTCCGGGTCTTCCGTACTTCTTGAATCAGGATCCATCCTTCCAATTAAAATTCATAGGAATGAAGAGACAGGGAAGATCTTCAATATTGTGTTTGTATGGGCTGATGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTTAAAGGCGAAGAGGCTTGCCCTGGTCTTCAGAAAGGAGGTCAACTGAACAAGATAAGAACTAGCCTGAAATATCTTTGCCCGGCCGAACACATTCCCTCAAAGATTGAGGTGGATGTAAGTAATCTGGACATTGGGGATAGAATTTTCATTCGCGATGTAGACGTCCATTCTTCTATGAAGCTACTTAGCAAGAACGAAGTAATGCCTATATGTAAAATAGTCACAATCAAGTCTGAAACTGCAAACACAGAAACTTCAGCAACTTCAGAAACATCAGAAACTTCATGA

Protein sequence

MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIPAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSVLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNKIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIKSETANTETSATSETSETS*
Homology
[Close]
BLAST of Cucsa.250550 vs. Swiss-Prot
Match: RL25_WOLTR (50S ribosomal protein L25 OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=rplY PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.8e-14
Identity = 69/221 (31.22%), Postives = 105/221 (47.51%), Query Frame = 1 

Query: 36  TIQAIPRECSGRKISSKDRAQGRIPAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSIL 95
           TI A  R+ +  K     R +G IPAVV+ +     N+V+        LT   K+     
Sbjct: 8   TINAELRDVTKTKAIRSLRKKGNIPAVVYGKG---HNNVN--------LTLSAKEF---T 67

Query: 96  KSVELPFFCSTRFKLQIRAGSGSSVLLESGSILPIKIHRNEETGKIFNIVFVWADEGSEL 155
           K  +L F  +   +L I   SG     E   +  I+ H  ++T  I ++ F + D+GSE+
Sbjct: 68  KQYKLGFLSAHVIELDI---SGKK---EYALVRDIQWHVVKDT--IQHVDFQFVDKGSEI 127

Query: 156 KVDVPIVFKGEEACPGLQKGGQLNKIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRD 215
           K+D+P+ F  E   PG++ GG LN +  S+   C  + IP  IEVD+S   IG  + I D
Sbjct: 128 KIDIPLSFVNESKSPGIKLGGVLNVLCRSITVKCSPDKIPQAIEVDLSGKMIGQSVHISD 187

Query: 216 VDVHSSMKLLSKNEVMPICKIVTIKSETANTETSATSETSE 257
           V +   +KL +  E      +VTI +  +  E S    T E
Sbjct: 188 VKLPGGVKLAAHEE--ENFTVVTISAADSGVEESQVETTEE 204

[Close]
BLAST of Cucsa.250550 vs. Swiss-Prot
Match: RL25_ERYLH (50S ribosomal protein L25 OS=Erythrobacter litoralis (strain HTCC2594) GN=rplY PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.9e-14
Identity = 53/181 (29.28%), Postives = 92/181 (50.83%), Query Frame = 1 

Query: 36  TIQAIPRECSGRKISSKDRAQGRIPAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSIL 95
           T+ A  RE +G+  S   R +GR+PAV++           G      ++  E K +   +
Sbjct: 6   TLPAEARERAGKGASRALRREGRVPAVIY-----------GGKEEPTMIHVEEKLL---I 65

Query: 96  KSVELPFFCSTRFKLQIRAGSGSSVLLESGSILPIKIHRNEETGKIFNIVFVWADEGSEL 155
           K +    F ++  +++I  G     L +  ++ P+      E    F +      +G ++
Sbjct: 66  KQLMTGHFMNSIVEIEI-GGKTVRTLPKDVALHPVS--DRPEHADFFRLA-----KGGKI 125

Query: 156 KVDVPIVFKGEEACPGLQKGGQLNKIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRD 215
           +V VP+VF  EEA PGL+KGG LN +R  L+ +C  + IP +IE+DV+  ++GD I I +
Sbjct: 126 EVSVPVVFMNEEASPGLKKGGVLNVVRHELELVCENDKIPGEIEIDVTGKEVGDSIHISE 164

Query: 216 V 217
           +
Sbjct: 186 I 164

[Close]
BLAST of Cucsa.250550 vs. Swiss-Prot
Match: RL25_ANAMM (50S ribosomal protein L25 OS=Anaplasma marginale (strain St. Maries) GN=rplY PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.1e-14
Identity = 60/203 (29.56%), Postives = 98/203 (48.28%), Query Frame = 1 

Query: 54  RAQGRIPAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIR 113
           RA G IPAVV+ +    +++V+ S S    L           K   LP F S   KL I 
Sbjct: 26  RAAGLIPAVVYGKN---RDAVNISLSHADFLK----------KCRTLPIF-SQLIKLCID 85

Query: 114 AGSGSSVLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQ 173
                ++  E        I ++  +G + ++ F + D G+E+KV+VP+VF  E+ C G++
Sbjct: 86  GKEEFALTKE--------IQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVK 145

Query: 174 KGGQLNKIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPI 233
            GG LN +  SL   C  + IP  +EVD+ +L IG  I + D+ +  +M++  K E   I
Sbjct: 146 LGGALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVI 205

Query: 234 CKIVTIKSETANTETSATSETSE 257
             +    +     E  A  E+++
Sbjct: 206 ASVSATAAVEEAKEDGAPEESAQ 206

[Close]
BLAST of Cucsa.250550 vs. Swiss-Prot
Match: RL25_ANAMF (50S ribosomal protein L25 OS=Anaplasma marginale (strain Florida) GN=rplY PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.7e-14
Identity = 59/203 (29.06%), Postives = 98/203 (48.28%), Query Frame = 1 

Query: 54  RAQGRIPAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIR 113
           RA G IPAVV+ +    +++V+ S S    L           K   LP F S   KL I 
Sbjct: 26  RAAGLIPAVVYGKN---RDAVNISLSHADFLK----------KCRTLPIF-SQLIKLCID 85

Query: 114 AGSGSSVLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQ 173
                ++  E        I ++  +G + ++ F + D G+E+KV+VP+VF  E+ C G++
Sbjct: 86  GKEEFALTKE--------IQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVK 145

Query: 174 KGGQLNKIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPI 233
            GG LN +  SL   C  + IP  +EVD+ +L IG  I + D+ +  +M++  K E   +
Sbjct: 146 LGGALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVV 205

Query: 234 CKIVTIKSETANTETSATSETSE 257
             +    +     E  A  E+++
Sbjct: 206 ASVSATAAVEEAKEDGAPEESAQ 206

[Close]
BLAST of Cucsa.250550 vs. Swiss-Prot
Match: RL25_SPHAL (50S ribosomal protein L25 OS=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) GN=rplY PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 8.7e-14
Identity = 62/227 (27.31%), Postives = 107/227 (47.14%), Query Frame = 1 

Query: 36  TIQAIPRECSGRKISSKDRAQGRIPAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSIL 95
           T+ A  RE  G+  S + R  GR+PAVV+           G      ++  E K +   +
Sbjct: 6   TLTAETRERGGKGASRELRRNGRVPAVVY-----------GGKEEPLMIHVEEKLL---M 65

Query: 96  KSVELPFFCSTRFKLQIRAGSGSSVLLESGSILPIK---IHRNEETGKIFNIVFVWADEG 155
           K +    F ++   +++  G     L +  +  P+K   IH +          F+   + 
Sbjct: 66  KQLMTGHFMNSVVMIEV-GGKQIRTLPKDVAFHPVKDRPIHAD----------FLRIAKD 125

Query: 156 SELKVDVPIVFKGEEACPGLQKGGQLNKIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIF 215
           + ++V VP+VF+ EE  PGL++GG LN +R  L+ +C A++IP +I +DV+  DIGD I 
Sbjct: 126 ATVQVAVPVVFQNEEKSPGLKRGGVLNIVRHELELVCDADNIPDEIAIDVTGFDIGDSIH 185

Query: 216 IRDVDVHSSMKLLSKNEVMPICKIV---TIKSETANTETSATSETSE 257
           I +V +   ++    +    I  IV    +KS   +T      + +E
Sbjct: 186 ISNVTLPKGVESAITDRDFTIATIVAPSALKSSDGDTTKDEGEDAAE 207

[Close]
BLAST of Cucsa.250550 vs. TrEMBL
Match: A0A0A0LJM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G295950 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 1.7e-141
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1 

Query: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60
           MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP
Sbjct: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60

Query: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 120
           AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV
Sbjct: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 120

Query: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180
           LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK
Sbjct: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180

Query: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIK 240
           IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIK
Sbjct: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIK 240

Query: 241 SETANTETSATSETSETS 259
           SETANTETSATSETSETS
Sbjct: 241 SETANTETSATSETSETS 258

[Close]
BLAST of Cucsa.250550 vs. TrEMBL
Match: A0A059ALZ6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00975 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 9.5e-92
Identity = 172/245 (70.20%), Postives = 202/245 (82.45%), Query Frame = 1 

Query: 1   MANWWRSARTN-LRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRI 60
           MA WWR+A    L+ AA S       P  S  ++YHTIQAIPRECSG +++S+DRAQGRI
Sbjct: 1   MARWWRAAAAGGLKTAALSSPPPPVRPPPS--SSYHTIQAIPRECSGSRVASRDRAQGRI 60

Query: 61  PAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSS 120
           P VVF+Q +LEK+    SPSRK+LLTTERKQI SIL SV LPFFCST F LQIRAGSGSS
Sbjct: 61  PTVVFAQGLLEKDPGARSPSRKYLLTTERKQIKSILSSVRLPFFCSTTFGLQIRAGSGSS 120

Query: 121 VLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180
            LLESG +LP+K+HR+EETGKI N+V VWADEGS+LKVDVP+ FKGEE CPGL+KGG LN
Sbjct: 121 TLLESGKVLPVKVHRDEETGKILNLVLVWADEGSKLKVDVPVAFKGEEVCPGLKKGGYLN 180

Query: 181 KIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTI 240
            IRTSLK+ CPAEHIPSKIEVDVSNLDIGDRIF+RDV+ H SM+LLSKN+ +PICK+++ 
Sbjct: 181 AIRTSLKFTCPAEHIPSKIEVDVSNLDIGDRIFMRDVEFHPSMELLSKNDAIPICKVMST 240

Query: 241 KSETA 245
           KSE+A
Sbjct: 241 KSESA 243

[Close]
BLAST of Cucsa.250550 vs. TrEMBL
Match: M5VTL4_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022418mg PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.0e-89
Identity = 167/225 (74.22%), Postives = 189/225 (84.00%), Query Frame = 1 

Query: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60
           MAN WRSA  NLR    + +  +  PF SF A YHTIQAIPREC+G ++S KDRAQGRIP
Sbjct: 14  MANRWRSAGGNLRAVLQNPSSRQQAPFQSFSALYHTIQAIPRECTGNRVSVKDRAQGRIP 73

Query: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 120
           AVVFSQ++    +   S S+KHLLT ERKQI +ILKSVELPFFCSTRF LQIRAGSGSS 
Sbjct: 74  AVVFSQELNPSTTTVRSVSKKHLLTAERKQIQAILKSVELPFFCSTRFPLQIRAGSGSSD 133

Query: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180
           LLESG++LPIKIHR+EE+GKI N+VFVWADEGS+LKVDVP+VFKGE+ CPGL+KGG LNK
Sbjct: 134 LLESGNVLPIKIHRDEESGKILNLVFVWADEGSQLKVDVPVVFKGEDVCPGLKKGGHLNK 193

Query: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLL 226
           IRTSLKYLCPAEHIP KIEVDVS LDIGDR+FI DV+VH SMKLL
Sbjct: 194 IRTSLKYLCPAEHIPPKIEVDVSKLDIGDRVFIPDVEVHPSMKLL 238

[Close]
BLAST of Cucsa.250550 vs. TrEMBL
Match: A0A067GVH3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026232mg PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 7.5e-89
Identity = 160/217 (73.73%), Postives = 189/217 (87.10%), Query Frame = 1 

Query: 26  PFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIPAVVFSQQILEKNSVHGSPSRKHLLT 85
           PFS   + YHTIQAIPREC+G ++S++DR+QGRIPAVVF+Q +L+KN+   SPSRK +L+
Sbjct: 18  PFSRTTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILS 77

Query: 86  TERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSVLLESGSILPIKIHRNEETGKIFNIV 145
           TERKQIHSILKSVELPFFCST F LQIRAGSGSSVLL+SG +LPIK+HR+EETG+I N+V
Sbjct: 78  TERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLV 137

Query: 146 FVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNKIRTSLKYLCPAEHIPSKIEVDVSNL 205
           FVWAD+G+ELKVDVP+VFKG E+CPGL+KGG L  IRTSLKYLCPAEHI  KIEVDVSNL
Sbjct: 138 FVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL 197

Query: 206 DIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIKSE 243
           DIGDR+F+ D++VH S KLLSKNE MP+CKI   K E
Sbjct: 198 DIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLE 234

[Close]
BLAST of Cucsa.250550 vs. TrEMBL
Match: A0A061DG52_THECC (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain OS=Theobroma cacao GN=TCM_000561 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.7e-88
Identity = 161/209 (77.03%), Postives = 186/209 (89.00%), Query Frame = 1 

Query: 34  YHTIQAIPRECSGRKISSKDRAQGRIPAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHS 93
           YHTIQAIPREC+G ++S++DRAQGRIPAVVFSQ +LEK+  + SPSRK LLTTERKQI +
Sbjct: 22  YHTIQAIPRECTGNRVSTRDRAQGRIPAVVFSQGLLEKSPANRSPSRKQLLTTERKQIQT 81

Query: 94  ILKSVELPFFCSTRFKLQIRAGSGSSVLLESGSILPIKIHRNEETGKIFNIVFVWADEGS 153
           ILKSV+LPFFCST F LQIRAGSGSSVLL+SG +LPIKIHR+EE+GKI N+VFVWADEG+
Sbjct: 82  ILKSVQLPFFCSTTFPLQIRAGSGSSVLLDSGRVLPIKIHRDEESGKILNLVFVWADEGT 141

Query: 154 ELKVDVPIVFKGEEACPGLQKGGQLNKIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFI 213
           +LKVDVP+VFKGEE CPGL+KGG LN+IRTSLKYLCPAEHIP KIEVDVS LDIGDR+ +
Sbjct: 142 KLKVDVPVVFKGEEDCPGLKKGGSLNRIRTSLKYLCPAEHIPPKIEVDVSKLDIGDRVLM 201

Query: 214 RDVDVHSSMKLLSKNEVMPICKIVTIKSE 243
            DV+VH S+KLLSKNE MP+CKIV    E
Sbjct: 202 HDVEVHPSLKLLSKNESMPMCKIVATNFE 230

[Close]
BLAST of Cucsa.250550 vs. TAIR10
Match: AT5G66860.1 (AT5G66860.1 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain)

HSP 1 Score: 289.7 bits (740), Expect = 1.8e-78
Identity = 148/243 (60.91%), Postives = 180/243 (74.07%), Query Frame = 1 

Query: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAA------YHTIQAIPRECSGRKISSKDR 60
           MA WWR  R+     A         P SSF  +      Y TIQAIPRE +GR +S++DR
Sbjct: 1   MAKWWRGLRSVTAEVA-------DLPASSFGRSIRCIHQYQTIQAIPREATGRGVSARDR 60

Query: 61  AQGRIPAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRA 120
             GRIPAVVF Q +L+ ++     SRK LLT ++KQI SI+ SV LPFFCST F+LQIRA
Sbjct: 61  TIGRIPAVVFPQSLLDTDASKRGVSRKQLLTADKKQIKSIIDSVGLPFFCSTTFQLQIRA 120

Query: 121 GSGSSVLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQK 180
           G GSS L+ESG +LP+K+HR+EETGKI N+VFVWAD+G +LKVDVP+VFKG + CPGLQK
Sbjct: 121 GQGSSTLVESGRVLPLKVHRDEETGKILNLVFVWADDGEKLKVDVPVVFKGLDHCPGLQK 180

Query: 181 GGQLNKIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPIC 238
           GG L  IR++LK L PAEHIPSKIEVDVSNLDI D++ ++DV  H S+KLLSKNE MP+C
Sbjct: 181 GGNLRTIRSTLKLLGPAEHIPSKIEVDVSNLDIEDKVLLQDVVFHPSLKLLSKNETMPVC 236

[Close]
BLAST of Cucsa.250550 vs. TAIR10
Match: AT4G23620.2 (AT4G23620.2 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain)

HSP 1 Score: 137.9 bits (346), Expect = 8.9e-33
Identity = 83/231 (35.93%), Postives = 131/231 (56.71%), Query Frame = 1 

Query: 36  TIQAIPRECSGRKISSKDRAQGRIPAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSIL 95
           TI A+PR  SG+ IS+K+R  GR+P+++F Q+    +  HG    K L++ +  QI  ++
Sbjct: 53  TILAVPRSVSGKSISAKERKAGRVPSIIFEQE----DGQHGG--NKRLISVQTNQIRKLV 112

Query: 96  KSVELPFFCSTRF--KLQIRAGSGSSV----LLESGSILP-------IKIHRNEETGKIF 155
             +   FF S  F  +++   GS   +     L      P       IKIH +  T    
Sbjct: 113 NHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAVKSPFLSLMKLIKIHLHSGTDAPL 172

Query: 156 NIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNKIRTSLKYLCPAEHIPSKIEVDV 215
           N+ F+ A  G+ LKVD+P+VF G++  PGL+KG  LN I+ ++K+LCPAE IP  IEVD+
Sbjct: 173 NVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDL 232

Query: 216 SNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIKSETANTETSATSE 254
           S LDIG ++ + D+ VH ++KL+ K++  PI K+   +      ++S T +
Sbjct: 233 SQLDIGQKLVMGDLKVHPALKLI-KSKDEPIVKVAGGRVTDTQKKSSDTQK 276

[Close]
BLAST of Cucsa.250550 vs. NCBI nr
Match: gi|449461415|ref|XP_004148437.1| (PREDICTED: uncharacterized protein LOC101208580 [Cucumis sativus])

HSP 1 Score: 510.0 bits (1312), Expect = 2.4e-141
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1 

Query: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60
           MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP
Sbjct: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60

Query: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 120
           AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV
Sbjct: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 120

Query: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180
           LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK
Sbjct: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180

Query: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIK 240
           IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIK
Sbjct: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIK 240

Query: 241 SETANTETSATSETSETS 259
           SETANTETSATSETSETS
Sbjct: 241 SETANTETSATSETSETS 258

[Close]
BLAST of Cucsa.250550 vs. NCBI nr
Match: gi|659116072|ref|XP_008457885.1| (PREDICTED: uncharacterized protein LOC103497462 [Cucumis melo])

HSP 1 Score: 480.7 bits (1236), Expect = 1.6e-132
Identity = 242/258 (93.80%), Postives = 247/258 (95.74%), Query Frame = 1 

Query: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60
           MA WWRSA TNLR A  SGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP
Sbjct: 1   MAKWWRSAGTNLRWAVLSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60

Query: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 120
           AVVFSQQ+LEKN VHGSPSRKHLLTTERKQIHSILKSV+LPFFCSTRF+LQIRAGSGSSV
Sbjct: 61  AVVFSQQLLEKNPVHGSPSRKHLLTTERKQIHSILKSVKLPFFCSTRFQLQIRAGSGSSV 120

Query: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180
           LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK
Sbjct: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180

Query: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIK 240
           IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVH S+KLLSKNEVMPICKIVT K
Sbjct: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHPSLKLLSKNEVMPICKIVTTK 240

Query: 241 SETANTETSATSETSETS 259
           S+T NTE S TSETSETS
Sbjct: 241 SKTENTEASETSETSETS 258

[Close]
BLAST of Cucsa.250550 vs. NCBI nr
Match: gi|645272726|ref|XP_008241535.1| (PREDICTED: uncharacterized protein LOC103339950 [Prunus mume])

HSP 1 Score: 361.7 bits (927), Expect = 1.1e-96
Identity = 179/242 (73.97%), Postives = 202/242 (83.47%), Query Frame = 1 

Query: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60
           MAN WRSA  NLR      +  +  PF SF A YHTIQAIPREC+G ++S KDRAQGRIP
Sbjct: 1   MANRWRSAGGNLRAVLQHPSSRQQAPFQSFSALYHTIQAIPRECTGNRVSVKDRAQGRIP 60

Query: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 120
           AVVFSQ++    +   S S+KHLLTTERKQI +ILKSVELPFFCSTRF LQIRAGSGSS 
Sbjct: 61  AVVFSQELNPSTTTVRSVSKKHLLTTERKQIQAILKSVELPFFCSTRFPLQIRAGSGSSD 120

Query: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180
           LLESG++LPIKIHR+EE+GKI N+VFVWADEGS+LKVDVP+VFKGE+ CPGL+KGG LNK
Sbjct: 121 LLESGNVLPIKIHRDEESGKILNLVFVWADEGSQLKVDVPVVFKGEDVCPGLKKGGHLNK 180

Query: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIK 240
           IRT+LKYLCPAEHIP KIEVD+S LDIGDR+FI DV+VH SMKLLSKNE MPICKIV  K
Sbjct: 181 IRTTLKYLCPAEHIPHKIEVDISKLDIGDRVFIPDVEVHPSMKLLSKNETMPICKIVATK 240

Query: 241 SE 243
            E
Sbjct: 241 LE 242

[Close]
BLAST of Cucsa.250550 vs. NCBI nr
Match: gi|694381407|ref|XP_009366785.1| (PREDICTED: uncharacterized protein LOC103956509 [Pyrus x bretschneideri])

HSP 1 Score: 355.9 bits (912), Expect = 5.9e-95
Identity = 179/242 (73.97%), Postives = 203/242 (83.88%), Query Frame = 1 

Query: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60
           MAN WR+A ++LR    + +     PFSSF A YHTIQAIPRE +G ++S KDRAQGRIP
Sbjct: 1   MANRWRAAGSSLRAVLQNPSSGPQPPFSSFAAMYHTIQAIPREVTGNRVSVKDRAQGRIP 60

Query: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 120
           AVVFSQQ+   ++     SRKHLLTTERKQI +ILKSVELPFFCSTRF LQIRAGSGSS 
Sbjct: 61  AVVFSQQLNPTSAAARPVSRKHLLTTERKQIQAILKSVELPFFCSTRFPLQIRAGSGSSD 120

Query: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180
           LLESG+++PIKIHR+EE+GKI N+VFVWADEGSELKVDVP+VFKGE+ CPGL+KGG LNK
Sbjct: 121 LLESGNVIPIKIHRDEESGKILNLVFVWADEGSELKVDVPVVFKGEDVCPGLKKGGHLNK 180

Query: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIK 240
           IRTSLKYL PAEHIP+KIEVDVSNLDIGDR+FI DV+VH SMKLLSKNE MPICKIV   
Sbjct: 181 IRTSLKYLGPAEHIPTKIEVDVSNLDIGDRVFIPDVEVHPSMKLLSKNETMPICKIVATN 240

Query: 241 SE 243
            E
Sbjct: 241 LE 242

[Close]
BLAST of Cucsa.250550 vs. NCBI nr
Match: gi|658006248|ref|XP_008338279.1| (PREDICTED: uncharacterized protein LOC103401342 [Malus domestica])

HSP 1 Score: 347.4 bits (890), Expect = 2.1e-92
Identity = 173/237 (73.00%), Postives = 199/237 (83.97%), Query Frame = 1 

Query: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60
           MAN WR+A +N+     + +     PFSSF A YHTIQAIPRE +G ++S KDRAQGRIP
Sbjct: 1   MANRWRAAGSNIXAVLQNPSSGPQPPFSSFAAMYHTIQAIPREVTGNRVSVKDRAQGRIP 60

Query: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 120
           AVVFSQQ+   ++     SRKHLLTTERKQI +ILKSVELPFFCSTRF LQIRAGSGSS 
Sbjct: 61  AVVFSQQLNPTSAAARPVSRKHLLTTERKQIQAILKSVELPFFCSTRFPLQIRAGSGSSD 120

Query: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180
           LLESG+++PIKIHR+EE+GKI N+VFVWADEGSELKVDVP+VFKGE+ CPGL+KGG LNK
Sbjct: 121 LLESGNVIPIKIHRDEESGKILNLVFVWADEGSELKVDVPVVFKGEDVCPGLKKGGHLNK 180

Query: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIV 238
           IRTSL YL PAEHIP+KIEVDVS+LDIGDR+F+ DV+VH SMKLLSKNE MPICK V
Sbjct: 181 IRTSLTYLGPAEHIPTKIEVDVSDLDIGDRVFVPDVEVHPSMKLLSKNETMPICKXV 237

The following BLAST results are available for this feature:
BLAST of Cucsa.250550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL25_WOLTR1.8e-1431.2250S ribosomal protein L25 OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=... [more]
RL25_ERYLH3.9e-1429.2850S ribosomal protein L25 OS=Erythrobacter litoralis (strain HTCC2594) GN=rplY P... [more]
RL25_ANAMM5.1e-1429.5650S ribosomal protein L25 OS=Anaplasma marginale (strain St. Maries) GN=rplY PE=... [more]
RL25_ANAMF6.7e-1429.0650S ribosomal protein L25 OS=Anaplasma marginale (strain Florida) GN=rplY PE=3 S... [more]
RL25_SPHAL8.7e-1427.3150S ribosomal protein L25 OS=Sphingopyxis alaskensis (strain DSM 13593 / LMG 188... [more]
BLAST of Cucsa.250550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJM8_CUCSA1.7e-141100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G295950 PE=4 SV=1[more]
A0A059ALZ6_EUCGR9.5e-9270.20Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00975 PE=4 SV=1[more]
M5VTL4_PRUPE2.0e-8974.22Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022418mg PE=4 S... [more]
A0A067GVH3_CITSI7.5e-8973.73Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026232mg PE=4 SV=1[more]
A0A061DG52_THECC1.7e-8877.03Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain OS=Theobrom... [more]
BLAST of Cucsa.250550 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G66860.11.8e-7860.91 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain[more]
AT4G23620.28.9e-3335.93 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain[more]
BLAST of Cucsa.250550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461415|ref|XP_004148437.1|2.4e-141100.00PREDICTED: uncharacterized protein LOC101208580 [Cucumis sativus][more]
gi|659116072|ref|XP_008457885.1|1.6e-13293.80PREDICTED: uncharacterized protein LOC103497462 [Cucumis melo][more]
gi|645272726|ref|XP_008241535.1|1.1e-9673.97PREDICTED: uncharacterized protein LOC103339950 [Prunus mume][more]
gi|694381407|ref|XP_009366785.1|5.9e-9573.97PREDICTED: uncharacterized protein LOC103956509 [Pyrus x bretschneideri][more]
gi|658006248|ref|XP_008338279.1|2.1e-9273.00PREDICTED: uncharacterized protein LOC103401342 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011035Ribosomal_L25/Gln-tRNA_synth
IPR020056Rbsml_L25/Gln-tRNA_synth_N
IPR020057Ribosomal_L25_b-dom
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006418 tRNA aminoacylation for protein translation
biological_process GO:0006412 translation
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
cellular_component GO:0005575 cellular_component
molecular_function GO:0008097 5S rRNA binding
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.250550.1Cucsa.250550.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011035Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domainunknownSSF50715Ribosomal protein L25-likecoord: 41..236
score: 1.74
IPR020056Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domainGENE3DG3DSA:2.40.240.10coord: 36..120
score: 8.
IPR020057Ribosomal protein L25, beta domainGENE3DG3DSA:2.170.120.20coord: 152..244
score: 4.3
IPR020057Ribosomal protein L25, beta domainPFAMPF14693Ribosomal_TL5_Ccoord: 155..237
score: 2.1
NoneNo IPR availablePANTHERPTHR33284FAMILY NOT NAMEDcoord: 1..245
score: 5.9E
NoneNo IPR availablePANTHERPTHR33284:SF2SUBFAMILY NOT NAMEDcoord: 1..245
score: 5.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.250550Cla020131Watermelon (97103) v1cgywmB471
Cucsa.250550Csa2G295950Cucumber (Chinese Long) v2cgycuB358
Cucsa.250550MELO3C020945Melon (DHL92) v3.5.1cgymeB423
Cucsa.250550ClCG02G013310Watermelon (Charleston Gray)cgywcgB441
Cucsa.250550CSPI02G14950Wild cucumber (PI 183967)cgycpiB374
Cucsa.250550CmaCh20G011220Cucurbita maxima (Rimu)cgycmaB0696
Cucsa.250550CmoCh20G011550Cucurbita moschata (Rifu)cgycmoB0696
Cucsa.250550Lsi10G006460Bottle gourd (USVL1VR-Ls)cgylsiB409
Cucsa.250550Cp4.1LG16g00250Cucurbita pepo (Zucchini)cgycpeB0665
Cucsa.250550MELO3C020945.2Melon (DHL92) v3.6.1cgymedB417
Cucsa.250550CsaV3_2G017490Cucumber (Chinese Long) v3cgycucB380
Cucsa.250550Cla97C02G039000Watermelon (97103) v2cgywmbB443
Cucsa.250550Bhi10G001845Wax gourdcgywgoB500
Cucsa.250550Carg20947Silver-seed gourdcarcgyB1109
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.250550Cucumber (Gy14) v1cgycgyB046
Cucsa.250550Cucurbita maxima (Rimu)cgycmaB0697
Cucsa.250550Cucurbita maxima (Rimu)cgycmaB0699
Cucsa.250550Cucurbita moschata (Rifu)cgycmoB0697
Cucsa.250550Cucurbita moschata (Rifu)cgycmoB0699
Cucsa.250550Wild cucumber (PI 183967)cgycpiB375
Cucsa.250550Cucumber (Chinese Long) v2cgycuB359
Cucsa.250550Watermelon (97103) v1cgywmB469
Cucsa.250550Melon (DHL92) v3.5.1cgymeB425
Cucsa.250550Watermelon (Charleston Gray)cgywcgB439
Cucsa.250550Cucurbita pepo (Zucchini)cgycpeB0663
Cucsa.250550Cucurbita pepo (Zucchini)cgycpeB0666
Cucsa.250550Cucurbita pepo (Zucchini)cgycpeB0667
Cucsa.250550Melon (DHL92) v3.6.1cgymedB419
Cucsa.250550Silver-seed gourdcarcgyB1174
Cucsa.250550Cucumber (Chinese Long) v3cgycucB381
Cucsa.250550Watermelon (97103) v2cgywmbB441
Cucsa.250550Watermelon (97103) v2cgywmbB442