Carg20947 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20947
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	50S ribosomal protein L25
Location	Cucurbita_argyrosperma_scaffold_141 : 804262 .. 811374 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCTCAACTCCTCGCTATTCCGGCTGCCATTGTTAATATCTCCGACCGATCATGGCCAAGTGGTGGCGCTACACCGGAACGAACCTTAGGTTGTTGGCGCTTTCCAGCGCTAGATCGGAACCGTTTCCATTTTCATCATCTCGAGCTGCTTCTTACCATACTATCCAAGCCATCCCCAGAGAGTGCAGCGGCAGCAGAATTTCAACCAGAGATAGAGCGCAGGGAAGAATCCCCGCCGTTGTTTTCAGTCAACAACTCCTTGAGAAAAACTCCATCCACGGATCGCCGTCGCGGAAGCATCTGCTCACTGCAGAGCGGAAGCAAATCCACTCCATTCTCAAGTCCGTTGAGCTCCCTTTCTTTTGCTCCACTAGGTTACAGCTCCAAATCCGTGCTGGTTCTGGATCTTCAGTCCTTCTTGAATCAGGATCAATCCTTCCAATCAAAGTAAGCCATTCGTTTGTCTCCACCGGTTTGTTTGTGTTTAATTCAACTTGATTTTTCTTTCATTTTCTTGTTATGGAGTGATTGCTTGGGATTTTTCAGGTTCACAGGGATGAAGAGACCGGGAAGATCTTGAATATGGTGTTTGTATGGGCTGAGGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTCAAAGGGGAAGAGACTTGCCCCGGTCTTCAGAAAGGTAACCAACGAAGATATCTTACTTTAATTCTCAACCTGACGCAGTCGTATTCTTGGTTTCTTAGAGCAAGATATAAGTAGTCGTAGTCTTGTGGAATTAATTTACAAAAATAAGGCGAAAGTGCAATTGTCTAAGAATTTGTGTCCTTTTTACACGGTGTTATCAAAATTCCCCCTGGAGGGTGCTTTCACCGAAGAAGAGGTAGGGAAGGGGATTAAGCTTTTGGACCCCGATAAAACTCCGGGGACTGGATGGTTTTACCTCCGAATTCTTAAAAAAATGTTGGAACATTCTGAGAGCAGATGCATGAGAGTGTTCCAAGATTTTTTTAGAATGAAATTATCAACGGAAACTTGAATGAAACATATATCTATTTGATTTCAAAGAAATGATTACTTTTGCCCCATAAATCTTTTGTTGGAGAAGTTCTATCATATAACATTATAAGATTTATGATTACTAGGCAGCATATAACATTTGAGAGGGATGTTAGATTCTTGATACATTCCTCATGACAAACGAGTTAATAGACTGTTGGAAAAGGAGGAAACAAACCGGTGTAGACATCAAACTTGACCTAGAAAAAACCTTCAGTTGGACTTTTCTCGAGGCGCAAAATGGTATGGTGGATAAAAGGTTGCTTCTCATCCACAAATTTCTCCATCATCATCAATGGAAAGTTGAAAGGAAAAATCTAGGCTACTTTGGGTCTTGGACAAGAGAATTTACTATCCCTTTTTCTTTTCATATTGATAATGGATTGCCATAGTTGCTTACTCACCTAGGCAGAATACTAAGGCATACAAAGGGCTTTTAGGTTGGTAACAAAGACTTAAAGTATCGACCACTTCTAGTTTGCTAATGACACAATCCTCTGAATGTTGATAACATAATTCTTTTCTTTGAATTAACAAATGTCCCCTCCATAAAAACATGTTTGAGAAGGTAAAAACCTTCGAGAAGTTTTTGGGACAAAACATCAACCTTCAAAAAAACAGGGATGATGGACATTAATGTTAGCATAAAGGATATCAAAGACTTTGTCAACAAATATGGTTTAAAAAGCGTGAATGATCGAATGTACTTAGGATTACCCTTGAATCGGAACCCCAAATCCGTCTCTTTTTGGAAGACCATTATTGAGAAAATAAAAAATAAAAAGTTACCATTATGGTCATCATTTTAAACTTCTAATGCGGAAGGCTCACCCTAATACAAGCTACACTGTCCAGCCTTCCCACTTACTATATGTCTCTATTTGAAATGCCTATGAAGTGGCTATAGAAATATAAAGATCATTGAGAAACTCTATGTAGAAAGATGACCCACACCTTGTGATATGAACCAAGACCAAGAAATTTTCATACCTCAAGGTCCAATTACAAGGACAAGAGCCAAGAAGTTGCAACGAGTTTTAGTCACTTATATTCGAGCTAGGATGAGCTTGTCAAAGAAAATTGTAGAAGACGTTGAAGTCCTTCCCTACACGCGATGCAAAGTTGAGCTTCAAGATATAGATGAATTAAATGCATTTTAATTTGCATTTAATGAATTCATAGTTGAATTTATGAAACTTAGTCTAAGGATGGTTACTAGATAGCACATTTCTTTTATTGAATTATTTTAATAGTAATTTCAATATTTGTTTATCATTAAGCTAGTTTTAATATGAGAGTTAAGGTTATATTGTAACCCACATATCTCACTATATTCCATCATTAACTAGTCCTTTTAATATGGAGGTGGTGTATTTCTCATTAACTAGCCATTTTAATACGAAGGTTATGTACCTATTTAATTCACATAGGTTAAGGTTGTCAAAGACCATATAAAGTGTTAGATCTGGGTCTTATCTATATTTTGTTTTCCCTAAGATATTCCAAATCGTTTTTTTTTAATGGTAAATTGATTGGATTTTGAAAATATGTCACAAAATATAGCCTTTTCAACCTTAATCTACGTGAGTTAAATACACGCTTAACCTCCATATTAAAATTGCCCGTTAATGAGAAAATATGGTAACCTAGAACTTCCGACTAGTTAATGAGAAAAATATGGTAACCTAGGTGGGTTATAATATAACCTTAACTTCTATGTTAAAACTAGCTTGAATGATTAACAAATATTGAAATTACAATTAAAATAATGCATAAAAGAAATGCTCTATCTAGTAACATCATTGGACTAAGTCCCATAAATTCAACTATGAGTTCATTAAATGCAAATCCATTTAATGAACTCATAGCTCGAATATAAGTGACTAAAGCTCGTTGTCACCTCTTGGCTTTCGTCCTTGTAATTGGACCTTGAGTTATGGAAATTTCTTGGTCTTGGTTCATATCACCTTGTCCGATAGAATACTATAAACCTTCCAGTAAACAAGGGAGGACTCGTCCTATATTTGATAAAGGAGAAGAACAAAGCTCTCCTCTCGTCAAACGAGCACAAAGGCGCCTCCTTGTGTAGAAATCATATAAAGGCTAAATATGCTCCTACGTTATGGACAAGCCACAAAGGAGTCACGGAAGTATATAAAAAAGCTCCAAAACCTTATCACCATCTGCATTTGCCAAAGATTGGGTGATGGAGGAAACTCATCTTGCTGGATTAACCCTTAGATTGACAACACCACACTAGCCTTGCGGTATCCTCTTTTGCATAGATTCTCACAATGCAAAATGGCCACGACCAAAGAAACATGAAAAGACGTTAACAAAGCTAAGAAATGAATCGAATTAAGTCTTGACTTTACCTCAATTGTATTGTCTAAAAAATCAGTCTCATTGAAATGGTACCTTGCATTGACGGGGTCTTCCCCACAAAGTCTTTGACGATGGATATGGAGGAAAAGGTAGAAGCAATAAACCCCTCACTAGCAAAGGCAATATGTAAAGAAAATCATCCTTAAAAGGTAAAAGTTTTTTCTATGGAGAATGGTGCATAAAGCCCATTAGCACAACTAGAAACTTATAGCAAAGAATGTCGGACATTATTTCCTAATTGGTGTCCATTATGCAAGAAAGACAATGAATCACAAAACCATTTATTTATGCAGAGTGTCACAACCATACTATGAAAAGAGTAGGTTGTGACCCTCATATAAAGGCAGATAAGGTGGCAACACGGAAGTGGCGCCCAACTAGCCAAGCAAGGGCTGAGGTAGACAAGTATCATGATGCAACTGAGGAGGACGGTGCATCATTTAACACATCACTAAGATGTGCATGAAAACCCAAAATGAGACATAGGCAAGAAAGAGGTAACAGTGTTGACGTGAGTGTCAAAGATAGGCTTGGTAAGGTCAGGTAGGGTCTTGGGCCTTAATCTCAAAAGTCAGGGTTCTAGAGGACATTCAGGAATGTGGCTTTGGAGTTAAGCCCATCCATATGAAGTATGAATGCTCACGAAATTCGATATCAATCAGACATCGGATGGACGTTTCACGACGTCGTTTGACTGTTCGCCAAAATCACGTCTACTCCAGGAAGACTAGAAATGACTCAAAACGTACCTTAGGGGGGCATGATGTTAGCTCTCCACCACCCCTGGGCCCTATGGCCTAAGCGAGCTACCCTGTGGCACATATGTGTGTCATAGTGAGGGTGAGCGTTGCAAGATGAGTGTCTCGTATGACTTCCTTTGAATGTGTCTTTCAAAGACAGTGTCAGACGACACGGATGTGCCGATATGTGCCCTACCCCATGTGTTGGAGGTCGGATCATACACCTGCTATCCTGTACAGAGTCCGTAAATGATATGACATGGACACAAGAGGGTCCAATACCTCGATAGGCCCGGATGGATGGATGTTCGAGATGTCCTGATGTTATGAGAGACAAATGGGTCCATTCTTGATGAGCATGACCGAGCAAGCTAAGTTGGCTGATGACTTTTCGGGACTTGGGATGACATCATGACATGAAGACCATGTTAATTGGAAACCCAGATGATGTTGGGATACGACGTTGCTTACGAGAGACCTTGGCCCGGTTAAAGACAAGGTCGAGGCAGAGGACTTGGTCTATTGTGGAGGCAAGTCAAATTGAGTTGCAGATGATTGAATATGCACGCACGCATAAACGACGTGTGTGGCCGCGCTGGATGAGCTTGATTACACACAAGTTGTGTTCGGTGGGTAAAGACAACCTCACCTAAGGCCCGACAAAGCCACAAAGACGGACGACAAATGAATATGGGGACTTGAGTTCCCCTCAAGGCTTGTCGTGAGCATGTCAAGATCACAACACCACGGCGTTGAAAATGTACGACCGTGACATGGTATACACTTATGACTTTTGGACAAAAATTCTCAATATTTTTAGATGGCGTCTTACTTTTTCTAAGTATGCAAAAGAGTTATTAGATATGACCTTAATGAACTACACATTTAAGAACGAAAAAGCCTTGTCATGGACAAATCTCATTAGGGCTTCCCTTTTGGAGTCTATGGAAAGAATGAAATCGAAGAGTATTCACGGGGAAACACAGACTTATACTAGGCTTTTTGAAAACGTTGTTTACAACGTCATTTCTTGGTGTAAACTTTTGCTTCCTATAGTCATACTTCCCTTGTTGTATTGAGAAGGTACTTTGTAAGCATCATGGATAACATATCCCTTTGGTAAATTTCAAATATTAATGAATTTTTTTCCATTGAGGAATTAGTTTATTGAATCCAGAAAATATACTTAGCCGTCTGTGCACTTCTTATTGTTGCCAAGGTGACCCCGAAGTTTTATCTTAAGAGAAGCAAAAAAGTTAGTTGTAATTGGTTTCGCAATTTGGTCCCATCACTTTGACTTTCCTTTACTGTACAAAAGCGCACACCCCACTTTATAGTTCCAAGAAATTTCCCAAGACAAGATATCATAAAACGCAAAATAACTATAAGAAGGCTTCCCAACAAAAACTAATACTAGAGGGTGTCTAATTCTTAAATTGTTCGGAATAATACTCCAAGAAGCTGTGCAATATTTAATCATCTCAAAGCTTTCTTTCCTCCTGGGTTGCTCGAAGATTCTCTGTTTTCAAGTCTAAAGACCTCACAGAAAATAGCTTTAACCAATTGTTGATTCCAGGAACTTTAGCTTTCGTTTGTAATCTATGCCTCAGAGACATAAAAATGTTGTTTTTAGCTATTAAATCATATACTTAATATGAGAATCCAACTCGGGAATGCTGTGAATGTGAACTTAAACCATGATAGTTTCTACATCTCAGGTGATTGTGGAGTTCATTGAGACTTGAGAGTTTGCATCGACTACATTTCTTTAGTTCTTACTTCAAAGTATTTTGTACCATTTTTGTGAGCCATGTTAGACCCTGTTAGTCATTAATGATAAGCAATGATCTTAAGATGCATCGGCTGATGAGTTGTATCATGAAGCATTGACGTTTTGGGAAATATATGACATTTTCTGAAGTTCAAACTATGAACTATGGCCAAACTTAGGTAGATGCACCATTAGCCTTTTCAACTTTTGTTCTCTAATAATGGGTACCCTCTGGCCTGCAAGGCTTTTGCAAATTTGCTGTCTGTTGAATTTGATAGCCACAGTTCAGTTAATGATTATGCTGTTTAAACATGGTAAATAAAAGAAGGTCTTGATTGCTATCTGATCGTAGCTAGGATGATAAAGAGTTGGACAATTGATATGGTATAATTAAGCAAAACTTGTATTGTGGTCTTTGTCTGCCTGTCAACTGTTCTTCTGAAGTCTGATACCTTACTTTTGTGGAAAACAGGAGGTCAACTGAATAGGATAAGAACTAGCCTAAGATACCTTTGCCCGGCCGAGCACATTCCTTCGAAGATTGAGGTGGATGTAAGTAATCTGGAGATCGGGGAGAGAATTTTCATTCGCGATATAGACGTCCATCCTTCCTTGAAGCTACTTAGCAAGAACGAAGTCATGCCTATTTGTAAAATAGTCACAACAAACCCGAAACCGGCCATCACAGAAGCTTCAGAGCCTTCATGACTACTACGGATTCATTGACATTTAGGTTCAGAATCATTTGGTTTACTAAACAACTTATGGTTGAAGAGGCCAAAGAATAACATCCAGTTGGCTTCAAGTTAATCACAACTTATGGTTAAATTGTTATGTTCTTTGTATAAATTTGGAACCTTTTTTCCTGTTTCGATTCCTCGCTTTACTGACTTTTGATTTGCAAGCTGAGAATTTTGGTGAAGCTCAGGTTCATATTAGCTCTCAAGAGACCTCTTTCCTGCTGGATAAAAATTATCAGAGAAGATAAATGCTTAAAGAATTATTTATTACTGTAGGAAGGAAAAGGAATAATGATTGCACTAGAGATAAAACTGTCAAATTAATGGCCATTGCTAATTCTGAAATCTGTTTTGGTCTTGAAGTCTTTATATTCGCTCTCTACTTTGCTCTATAAATGACTTCTCTTGGTTCTTGTTCTTGTTC

mRNA sequence

CGCTCAACTCCTCGCTATTCCGGCTGCCATTGTTAATATCTCCGACCGATCATGGCCAAGTGGTGGCGCTACACCGGAACGAACCTTAGGTTGTTGGCGCTTTCCAGCGCTAGATCGGAACCGTTTCCATTTTCATCATCTCGAGCTGCTTCTTACCATACTATCCAAGCCATCCCCAGAGAGTGCAGCGGCAGCAGAATTTCAACCAGAGATAGAGCGCAGGGAAGAATCCCCGCCGTTGTTTTCAGTCAACAACTCCTTGAGAAAAACTCCATCCACGGATCGCCGTCGCGGAAGCATCTGCTCACTGCAGAGCGGAAGCAAATCCACTCCATTCTCAAGTCCGTTGAGCTCCCTTTCTTTTGCTCCACTAGGTTACAGCTCCAAATCCGTGCTGGTTCTGGATCTTCAGTCCTTCTTGAATCAGGATCAATCCTTCCAATCAAAGTTCACAGGGATGAAGAGACCGGGAAGATCTTGAATATGGTGTTTGTATGGGCTGAGGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTCAAAGGGGAAGAGACTTGCCCCGGTCTTCAGAAAGGAGGTCAACTGAATAGGATAAGAACTAGCCTAAGATACCTTTGCCCGGCCGAGCACATTCCTTCGAAGATTGAGGTGGATGTAAGTAATCTGGAGATCGGGGAGAGAATTTTCATTCGCGATATAGACGTCCATCCTTCCTTGAAGCTACTTAGCAAGAACGAAGTCATGCCTATTTGTAAAATAGTCACAACAAACCCGAAACCGGCCATCACAGAAGCTTCAGAGCCTTCATGACTACTACGGATTCATTGACATTTAGGTTCAGAATCATTTGGTTTACTAAACAACTTATGGTTGAAGAGGCCAAAGAATAACATCCAGTTGGCTTCAAGTTAATCACAACTTATGGTTAAATTGTTATGTTCTTTGTATAAATTTGGAACCTTTTTTCCTGTTTCGATTCCTCGCTTTACTGACTTTTGATTTGCAAGCTGAGAATTTTGGTGAAGCTCAGGTTCATATTAGCTCTCAAGAGACCTCTTTCCTGCTGGATAAAAATTATCAGAGAAGATAAATGCTTAAAGAATTATTTATTACTGTAGGAAGGAAAAGGAATAATGATTGCACTAGAGATAAAACTGTCAAATTAATGGCCATTGCTAATTCTGAAATCTGTTTTGGTCTTGAAGTCTTTATATTCGCTCTCTACTTTGCTCTATAAATGACTTCTCTTGGTTCTTGTTCTTGTTC

Coding sequence (CDS)

ATGGCCAAGTGGTGGCGCTACACCGGAACGAACCTTAGGTTGTTGGCGCTTTCCAGCGCTAGATCGGAACCGTTTCCATTTTCATCATCTCGAGCTGCTTCTTACCATACTATCCAAGCCATCCCCAGAGAGTGCAGCGGCAGCAGAATTTCAACCAGAGATAGAGCGCAGGGAAGAATCCCCGCCGTTGTTTTCAGTCAACAACTCCTTGAGAAAAACTCCATCCACGGATCGCCGTCGCGGAAGCATCTGCTCACTGCAGAGCGGAAGCAAATCCACTCCATTCTCAAGTCCGTTGAGCTCCCTTTCTTTTGCTCCACTAGGTTACAGCTCCAAATCCGTGCTGGTTCTGGATCTTCAGTCCTTCTTGAATCAGGATCAATCCTTCCAATCAAAGTTCACAGGGATGAAGAGACCGGGAAGATCTTGAATATGGTGTTTGTATGGGCTGAGGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTCAAAGGGGAAGAGACTTGCCCCGGTCTTCAGAAAGGAGGTCAACTGAATAGGATAAGAACTAGCCTAAGATACCTTTGCCCGGCCGAGCACATTCCTTCGAAGATTGAGGTGGATGTAAGTAATCTGGAGATCGGGGAGAGAATTTTCATTCGCGATATAGACGTCCATCCTTCCTTGAAGCTACTTAGCAAGAACGAAGTCATGCCTATTTGTAAAATAGTCACAACAAACCCGAAACCGGCCATCACAGAAGCTTCAGAGCCTTCATGA

Protein sequence

MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRIPAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSSVLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLNRIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTTNPKPAITEASEPS

Homology

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BLAST of Carg20947 vs. NCBI nr
Match: XP_023512718.1 (uncharacterized protein LOC111777386 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493.8 bits (1270), Expect = 3.5e-136
Identity = 249/253 (98.42%), Postives = 251/253 (99.21%), Query Frame = 0


Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR TGTNLRLLALSSARSEPFPFSSSRA SYHTIQAIPRECSGSRISTRDRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRATSYHTIQAIPRECSGSRISTRDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSV+LPFFCSTRLQLQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVDLPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILPIKVHRDEETGKILNMVFVWA+EGSELKVDVPIVFKGEETCPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKVHRDEETGKILNMVFVWADEGSELKVDVPIVFKGEETCPGLQKGGQLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
           RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 NPKPAITEASEPS 254
           NPKPAITEASEPS
Sbjct: 241 NPKPAITEASEPS 253

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BLAST of Carg20947 vs. NCBI nr
Match: XP_022928099.1 (uncharacterized protein LOC111434985 [Cucurbita moschata])

HSP 1 Score: 490.7 bits (1262), Expect = 2.9e-135
Identity = 250/253 (98.81%), Postives = 250/253 (98.81%), Query Frame = 0


Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR TGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
           RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 NPKPAITEASEPS 254
           N KPAITEAS PS
Sbjct: 241 NLKPAITEASLPS 253

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BLAST of Carg20947 vs. NCBI nr
Match: XP_022971722.1 (uncharacterized protein LOC111470391 [Cucurbita maxima])

HSP 1 Score: 486.5 bits (1251), Expect = 5.5e-134
Identity = 247/253 (97.63%), Postives = 249/253 (98.42%), Query Frame = 0


Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR TGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRIS+RDRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILPIKVHRDEETGKILNMVFVWA+EGSELKVDVPIVFKGEE CPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKVHRDEETGKILNMVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
           RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 NPKPAITEASEPS 254
             KPAITEASEPS
Sbjct: 241 IQKPAITEASEPS 253

[Close]

BLAST of Carg20947 vs. NCBI nr
Match: XP_022155486.1 (uncharacterized protein LOC111022615 isoform X2 [Momordica charantia])

HSP 1 Score: 434.9 bits (1117), Expect = 1.9e-118
Identity = 222/253 (87.75%), Postives = 229/253 (90.51%), Query Frame = 0


Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR  G N RL ALS A SEPF   S RAA YHTIQAIPRECSGSRIS RDRAQGRI
Sbjct: 1   MAKWWRSAGINPRLAALSRATSEPFSSPSFRAALYHTIQAIPRECSGSRISNRDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQLLEKNS+HGS SRKHLLT ERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSVHGSSSRKHLLTTERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILPIK+HRDEETGKILNMVFVWA+EGSELKVDVPIVFKGEE CPGL KGGQLN
Sbjct: 121 VLLESGSILPIKIHRDEETGKILNMVFVWADEGSELKVDVPIVFKGEEACPGLLKGGQLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
           RIRTSLRYLCPAEHIPSKIEVDVS L+IGERIFIRD+DVHPSLKLLSKNEVMPICKIV T
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSKLDIGERIFIRDVDVHPSLKLLSKNEVMPICKIVAT 240

Query: 241 NPKPAITEASEPS 254
           N     TE++EPS
Sbjct: 241 N-----TESAEPS 248

[Close]

BLAST of Carg20947 vs. NCBI nr
Match: XP_022155485.1 (uncharacterized protein LOC111022615 isoform X1 [Momordica charantia])

HSP 1 Score: 428.7 bits (1101), Expect = 1.4e-116
Identity = 222/258 (86.05%), Postives = 229/258 (88.76%), Query Frame = 0


Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR  G N RL ALS A SEPF   S RAA YHTIQAIPRECSGSRIS RDRAQGRI
Sbjct: 1   MAKWWRSAGINPRLAALSRATSEPFSSPSFRAALYHTIQAIPRECSGSRISNRDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQLLEKNS+HGS SRKHLLT ERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSVHGSSSRKHLLTTERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQK----- 180
           VLLESGSILPIK+HRDEETGKILNMVFVWA+EGSELKVDVPIVFKGEE CPGL K     
Sbjct: 121 VLLESGSILPIKIHRDEETGKILNMVFVWADEGSELKVDVPIVFKGEEACPGLLKVLWKT 180

Query: 181 GGQLNRIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPIC 240
           GGQLNRIRTSLRYLCPAEHIPSKIEVDVS L+IGERIFIRD+DVHPSLKLLSKNEVMPIC
Sbjct: 181 GGQLNRIRTSLRYLCPAEHIPSKIEVDVSKLDIGERIFIRDVDVHPSLKLLSKNEVMPIC 240

Query: 241 KIVTTNPKPAITEASEPS 254
           KIV TN     TE++EPS
Sbjct: 241 KIVATN-----TESAEPS 253

[Close]

BLAST of Carg20947 vs. TAIR10
Match: AT5G66860.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain)

HSP 1 Score: 296.6 bits (758), Expect = 1.5e-80
Identity = 150/242 (61.98%), Postives = 182/242 (75.21%), Query Frame = 0


Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR  G       ++   +  F  S      Y TIQAIPRE +G  +S RDR  GRI
Sbjct: 1   MAKWWR--GLRSVTAEVADLPASSFGRSIRCIHQYQTIQAIPREATGRGVSARDRTIGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVF Q LL+ ++     SRK LLTA++KQI SI+ SV LPFFCST  QLQIRAG GSS
Sbjct: 61  PAVVFPQSLLDTDASKRGVSRKQLLTADKKQIKSIIDSVGLPFFCSTTFQLQIRAGQGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
            L+ESG +LP+KVHRDEETGKILN+VFVWA++G +LKVDVP+VFKG + CPGLQKGG L 
Sbjct: 121 TLVESGRVLPLKVHRDEETGKILNLVFVWADDGEKLKVDVPVVFKGLDHCPGLQKGGNLR 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
            IR++L+ L PAEHIPSKIEVDVSNL+I +++ ++D+  HPSLKLLSKNE MP+CKIV T
Sbjct: 181 TIRSTLKLLGPAEHIPSKIEVDVSNLDIEDKVLLQDVVFHPSLKLLSKNETMPVCKIVAT 240

Query: 241 NP 243
           +P
Sbjct: 241 SP 240

[Close]

BLAST of Carg20947 vs. TAIR10
Match: AT4G23620.2 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain)

HSP 1 Score: 152.5 bits (384), Expect = 3.4e-37
Identity = 82/214 (38.32%), Postives = 128/214 (59.81%), Query Frame = 0


Query: 37  TIQAIPRECSGSRISTRDRAQGRIPAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSIL 96
           TI A+PR  SG  IS ++R  GR+P+++F Q+    +  HG    K L++ +  QI  ++
Sbjct: 53  TILAVPRSVSGKSISAKERKAGRVPSIIFEQE----DGQHG--GNKRLISVQTNQIRKLV 112

Query: 97  KSVELPFFCSTRLQLQIRAGSGSSVLLESGSILP-------------IKVHRDEETGKIL 156
             +   FF S    +++RA  GS  ++E    LP             IK+H    T   L
Sbjct: 113 NHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAVKSPFLSLMKLIKIHLHSGTDAPL 172

Query: 157 NMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLNRIRTSLRYLCPAEHIPSKIEVDV 216
           N+ F+ A  G+ LKVD+P+VF G++  PGL+KG  LN I+ ++++LCPAE IP  IEVD+
Sbjct: 173 NVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDL 232

Query: 217 SNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKI 238
           S L+IG+++ + D+ VHP+LKL+ K++  PI K+
Sbjct: 233 SQLDIGQKLVMGDLKVHPALKLI-KSKDEPIVKV 259

[Close]

BLAST of Carg20947 vs. Swiss-Prot
Match: sp|Q2NAN1|RL25_ERYLH (50S ribosomal protein L25 OS=Erythrobacter litoralis (strain HTCC2594) OX=314225 GN=rplY PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.9e-14
Identity = 55/181 (30.39%), Postives = 90/181 (49.72%), Query Frame = 0


Query: 37  TIQAIPRECSGSRISTRDRAQGRIPAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSIL 96
           T+ A  RE +G   S   R +GR+PAV           I+G      ++  E K    ++
Sbjct: 6   TLPAEARERAGKGASRALRREGRVPAV-----------IYGGKEEPTMIHVEEK---LLI 65

Query: 97  KSVELPFFCSTRLQLQIRAGSGSSVLLESGSILPIKVHRDEETGKILNMVFVWAEEGSEL 156
           K +    F ++ ++++I  G     L +  ++ P+   R E         F    +G ++
Sbjct: 66  KQLMTGHFMNSIVEIEI-GGKTVRTLPKDVALHPVS-DRPEHAD------FFRLAKGGKI 125

Query: 157 KVDVPIVFKGEETCPGLQKGGQLNRIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRD 216
           +V VP+VF  EE  PGL+KGG LN +R  L  +C  + IP +IE+DV+  E+G+ I I +
Sbjct: 126 EVSVPVVFMNEEASPGLKKGGVLNVVRHELELVCENDKIPGEIEIDVTGKEVGDSIHISE 164

Query: 217 I 218
           I
Sbjct: 186 I 164

[Close]

BLAST of Carg20947 vs. Swiss-Prot
Match: sp|B8EK41|RL25_METSB (50S ribosomal protein L25 OS=Methylocella silvestris (strain DSM 15510 / CIP 108128 / LMG 27833 / NCIMB 13906 / BL2) OX=395965 GN=rplY PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-13
Identity = 52/182 (28.57%), Postives = 91/182 (50.00%), Query Frame = 0


Query: 33  ASYHTIQAIPRECSGSRISTRDRAQGRIPAVVFSQQLLEKNSIHGSPSRKHLLTAERKQI 92
           A   T+ A  R  +G   +   R +GRIP V++           G P+    +T + +++
Sbjct: 2   AETKTLAAAARHGTGKGAARSVRREGRIPGVIYG---------GGDPAEP--ITLDYREL 61

Query: 93  HSILKSVELPFFCSTRLQLQIRAGSGSSVLLESGSILPIKVHRDEETGKILNMVFVWAEE 152
           +   K +    F +T  ++ + AG+   V+     + PIK          L++ F+  + 
Sbjct: 62  N---KLIYAGHFLTTLFEIDV-AGTKQRVIPRDYQLDPIK-------DLPLHVDFLRLKP 121

Query: 153 GSELKVDVPIVFKGEETCPGLQKGGQLNRIRTSLRYLCPAEHIPSKIEVDVSNLEIGERI 212
           G+ LKV+VP+ F  +ETCPG++KGG +N +R S+    PA+ IP  I  D+  LEI + +
Sbjct: 122 GASLKVEVPVHFLNQETCPGVKKGGSVNIVRHSIELRVPADDIPEAITADLGELEINDSL 161

Query: 213 FI 215
            +
Sbjct: 182 HL 161

[Close]

BLAST of Carg20947 vs. Swiss-Prot
Match: sp|A5CF34|RL25_ORITB (50S ribosomal protein L25 OS=Orientia tsutsugamushi (strain Boryong) OX=357244 GN=rplY PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-13
Identity = 52/190 (27.37%), Postives = 93/190 (48.95%), Query Frame = 0


Query: 55  RAQGRIPAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIR 114
           R QG++P V++ + +          +  H+ T E++    + K    PFF ST +QLQ+ 
Sbjct: 24  RRQGKVPGVIYKKGI----------TPIHVCTLEKE----VAKLYRKPFFSSTVIQLQVD 83

Query: 115 AGSGSSVLLESGSILPIKVHRDEETGKILNMVFVWAEE-GSELKVDVPIVFKGEETCPGL 174
                    +   +LP  V     T  + ++ F+  E+ GS  KV VPI F+G+E   G+
Sbjct: 84  D--------QRFKVLPKAVQLHPVTEFMNHIDFILVEQNGSMQKVKVPISFEGKEKSLGI 143

Query: 175 QKGGQLNRIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMP 234
           ++GG LN ++  +  LCP + IP  I+ D++N+ +G  I I  +++     L+       
Sbjct: 144 KRGGYLNIVKRYVDLLCPVDKIPQCIKCDIANVSVGASIKISRLELPEGCNLVKSTTDYV 191

Query: 235 ICKIVTTNPK 244
           I  ++  + K
Sbjct: 204 IASVIGKSSK 191

[Close]

BLAST of Carg20947 vs. Swiss-Prot
Match: sp|Q5GTJ0|RL25_WOLTR (50S ribosomal protein L25 OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) OX=292805 GN=rplY PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.6e-13
Identity = 58/194 (29.90%), Postives = 98/194 (50.52%), Query Frame = 0


Query: 37  TIQAIPRECSGSRISTRDRAQGRIPAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSIL 96
           TI A  R+ + ++     R +G IPAVV+ +     N+++        LT   K+     
Sbjct: 8   TINAELRDVTKTKAIRSLRKKGNIPAVVYGK---GHNNVN--------LTLSAKE---FT 67

Query: 97  KSVELPFFCSTRLQLQIRAGSGSSVLLESGSILPIKVHRDEETGKILNMVFVWAEEGSEL 156
           K  +L F  +  ++L I   SG     E   +  I+ H  ++T  I ++ F + ++GSE+
Sbjct: 68  KQYKLGFLSAHVIELDI---SGKK---EYALVRDIQWHVVKDT--IQHVDFQFVDKGSEI 127

Query: 157 KVDVPIVFKGEETCPGLQKGGQLNRIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRD 216
           K+D+P+ F  E   PG++ GG LN +  S+   C  + IP  IEVD+S   IG+ + I D
Sbjct: 128 KIDIPLSFVNESKSPGIKLGGVLNVLCRSITVKCSPDKIPQAIEVDLSGKMIGQSVHISD 179

Query: 217 IDVHPSLKLLSKNE 231
           + +   +KL +  E
Sbjct: 188 VKLPGGVKLAAHEE 179

[Close]

BLAST of Carg20947 vs. Swiss-Prot
Match: sp|Q5P9A5|RL25_ANAMM (50S ribosomal protein L25 OS=Anaplasma marginale (strain St. Maries) OX=234826 GN=rplY PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.3e-13
Identity = 38/120 (31.67%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 132 KVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLNRIRTSLRYLCP 191
           ++ +   +G + ++ F + + G+E+KV+VP+VF  E+ C G++ GG LN +  SL   C 
Sbjct: 81  EIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGGALNILHRSLLIRCA 140

Query: 192 AEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTTNPKPAITEASE 251
            + IP  +EVD+ +L IG  I + D+ +  ++++  K E   I  +  T    A+ EA E
Sbjct: 141 PDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVIASVSAT---AAVEEAKE 197

[Close]

BLAST of Carg20947 vs. TrEMBL
Match: tr|A0A1S3C6P2|A0A1S3C6P2_CUCME (50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103497462 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 1.7e-115
Identity = 210/243 (86.42%), Postives = 225/243 (92.59%), Query Frame = 0


Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR  GTNLR   LS  +SE FPFSS RAA YHTIQAIPRECSG +IS++DRAQGRI
Sbjct: 1   MAKWWRSAGTNLRWAVLSGTKSESFPFSSFRAA-YHTIQAIPRECSGRKISSKDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQLLEKN +HGSPSRKHLLT ERKQIHSILKSV+LPFFCSTR QLQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNPVHGSPSRKHLLTTERKQIHSILKSVKLPFFCSTRFQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILPIK+HR+EETGKI N+VFVWA+EGSELKVDVPIVFKGEE CPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
           +IRTSL+YLCPAEHIPSKIEVDVSNL+IG+RIFIRD+DVHPSLKLLSKNEVMPICKIVTT
Sbjct: 181 KIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 NPK 244
             K
Sbjct: 241 KSK 242

[Close]

BLAST of Carg20947 vs. TrEMBL
Match: tr|A0A0A0LJM8|A0A0A0LJM8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G295950 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 6.1e-113
Identity = 205/239 (85.77%), Postives = 222/239 (92.89%), Query Frame = 0


Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MA WWR   TNLRL A S  +SE FPFSS RAA YHTIQAIPRECSG +IS++DRAQGRI
Sbjct: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAA-YHTIQAIPRECSGRKISSKDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQ+LEKNS+HGSPSRKHLLT ERKQIHSILKSVELPFFCSTR +LQIRAGSGSS
Sbjct: 61  PAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILPIK+HR+EETGKI N+VFVWA+EGSELKVDVPIVFKGEE CPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVT 240
           +IRTSL+YLCPAEHIPSKIEVDVSNL+IG+RIFIRD+DVH S+KLLSKNEVMPICKIVT
Sbjct: 181 KIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVT 238

[Close]

BLAST of Carg20947 vs. TrEMBL
Match: tr|A0A251ND90|A0A251ND90_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G137800 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 2.4e-93
Identity = 175/248 (70.56%), Postives = 207/248 (83.47%), Query Frame = 0


Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MA  WR  G NLR +  + +  +  PF S  +A YHTIQAIPREC+G+R+S +DRAQGRI
Sbjct: 1   MANRWRSAGGNLRAVLQNPSSRQQAPFQSF-SALYHTIQAIPRECTGNRVSVKDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQ+L    +   S S+KHLLTAERKQI +ILKSVELPFFCSTR  LQIRAGSGSS
Sbjct: 61  PAVVFSQELNPSTTTVRSVSKKHLLTAERKQIQAILKSVELPFFCSTRFPLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
            LLESG++LPIK+HRDEE+GKILN+VFVWA+EGS+LKVDVP+VFKGE+ CPGL+KGG LN
Sbjct: 121 DLLESGNVLPIKIHRDEESGKILNLVFVWADEGSQLKVDVPVVFKGEDVCPGLKKGGHLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
           +IRTSL+YLCPAEHIP KIEVDVS L+IG+R+FI D++VHPS+KLLSKNE MPICKIV T
Sbjct: 181 KIRTSLKYLCPAEHIPPKIEVDVSKLDIGDRVFIPDVEVHPSMKLLSKNETMPICKIVAT 240

Query: 241 ---NPKPA 246
              NP+ A
Sbjct: 241 KLENPESA 247

[Close]

BLAST of Carg20947 vs. TrEMBL
Match: tr|A0A2P4N738|A0A2P4N738_QUESU (50s ribosomal protein l25 OS=Quercus suber OX=58331 GN=CFP56_54595 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.2e-92
Identity = 176/249 (70.68%), Postives = 205/249 (82.33%), Query Frame = 0


Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           M +WWR    NLR    S + S+P       +A YHTIQAIPREC G+R+S+RDRAQGRI
Sbjct: 1   MTRWWRSATNNLRTAVSSHSSSQP------SSAGYHTIQAIPRECVGNRVSSRDRAQGRI 60

Query: 61  PAVVFSQQLLEKNS-IHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGS 120
           PAVV SQ LL+K+S    S SRKHL+T E KQI +ILKSVELP+FCST   LQIRAGSGS
Sbjct: 61  PAVVISQHLLQKDSTAPRSMSRKHLVTTEWKQIQAILKSVELPYFCSTTFPLQIRAGSGS 120

Query: 121 SVLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQL 180
           S LLESG++LPIK+HRDE TGK+LN+VFVWA++GSELKVDVP+VFKGE+ CPGLQKGG L
Sbjct: 121 SHLLESGTVLPIKIHRDEATGKVLNLVFVWADDGSELKVDVPVVFKGEDACPGLQKGGHL 180

Query: 181 NRIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVT 240
           NR+RTSL+YLCPAE IP KIEVDVSNL+IG+RIF+ D++VHPSLKLLSKNE MPICKIVT
Sbjct: 181 NRVRTSLKYLCPAELIPPKIEVDVSNLDIGDRIFMHDVEVHPSLKLLSKNENMPICKIVT 240

Query: 241 T---NPKPA 246
           T   NP+PA
Sbjct: 241 TKWENPEPA 243

[Close]

BLAST of Carg20947 vs. TrEMBL
Match: tr|A0A2P5FY94|A0A2P5FY94_9ROSA (Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_017300 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.7e-91
Identity = 177/248 (71.37%), Postives = 206/248 (83.06%), Query Frame = 0


Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MA+WWR     LR+L  +S      P SSS+AASYHTIQAIPREC+G+R++ RDRAQGRI
Sbjct: 1   MARWWRSGAGGLRVLTTNS------PTSSSKAASYHTIQAIPRECTGTRVAARDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFS  LLEK+    S S+KHLLT E KQI SI++SV+LPFFCSTR  LQIRAGSGSS
Sbjct: 61  PAVVFSHNLLEKDPNSRSASKKHLLTTESKQIQSIVRSVKLPFFCSTRFPLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESG+I     HRDE+TGKILN+VFVWAEEGS+LKV+VPIVFKGE+  PGL+KGG LN
Sbjct: 121 VLLESGNI-----HRDEKTGKILNLVFVWAEEGSDLKVNVPIVFKGEDVSPGLKKGGNLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
           RIRTSL+YLCPAEHIP K+EVDVSNL+IG+RIF+RD++VHPSLKLLSKNE +PICKIV T
Sbjct: 181 RIRTSLKYLCPAEHIPPKVEVDVSNLDIGDRIFMRDVEVHPSLKLLSKNEDIPICKIVAT 237

Query: 241 ---NPKPA 246
              NP+ A
Sbjct: 241 ELENPESA 237

The following BLAST results are available for this feature:

BLAST of Carg20947 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512718.1	3.5e-136	98.42	uncharacterized protein LOC111777386 [Cucurbita pepo subsp. pepo]	[more]
XP_022928099.1	2.9e-135	98.81	uncharacterized protein LOC111434985 [Cucurbita moschata]	[more]
XP_022971722.1	5.5e-134	97.63	uncharacterized protein LOC111470391 [Cucurbita maxima]	[more]
XP_022155486.1	1.9e-118	87.75	uncharacterized protein LOC111022615 isoform X2 [Momordica charantia]	[more]
XP_022155485.1	1.4e-116	86.05	uncharacterized protein LOC111022615 isoform X1 [Momordica charantia]	[more]

BLAST of Carg20947 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G66860.1	1.5e-80	61.98	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]
AT4G23620.2	3.4e-37	38.32	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]

BLAST of Carg20947 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q2NAN1\|RL25_ERYLH	3.9e-14	30.39	50S ribosomal protein L25 OS=Erythrobacter litoralis (strain HTCC2594) OX=314225...	[more]
sp\|B8EK41\|RL25_METSB	1.9e-13	28.57	50S ribosomal protein L25 OS=Methylocella silvestris (strain DSM 15510 / CIP 108...	[more]
sp\|A5CF34\|RL25_ORITB	1.9e-13	27.37	50S ribosomal protein L25 OS=Orientia tsutsugamushi (strain Boryong) OX=357244 G...	[more]
sp\|Q5GTJ0\|RL25_WOLTR	5.6e-13	29.90	50S ribosomal protein L25 OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) OX=...	[more]
sp\|Q5P9A5\|RL25_ANAMM	7.3e-13	31.67	50S ribosomal protein L25 OS=Anaplasma marginale (strain St. Maries) OX=234826 G...	[more]

BLAST of Carg20947 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C6P2\|A0A1S3C6P2_CUCME	1.7e-115	86.42	50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103497462 PE=4 SV=1	[more]
tr\|A0A0A0LJM8\|A0A0A0LJM8_CUCSA	6.1e-113	85.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G295950 PE=4 SV=1	[more]
tr\|A0A251ND90\|A0A251ND90_PRUPE	2.4e-93	70.56	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G137800 PE=4 SV=1	[more]
tr\|A0A2P4N738\|A0A2P4N738_QUESU	1.2e-92	70.68	50s ribosomal protein l25 OS=Quercus suber OX=58331 GN=CFP56_54595 PE=4 SV=1	[more]
tr\|A0A2P5FY94\|A0A2P5FY94_9ROSA	1.7e-91	71.37	Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_017300 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0008097	5S rRNA binding
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR011035	Ribosomal_L25/Gln-tRNA_synth
IPR029751	Ribosomal_L25
IPR020057	Ribosomal_L25_b-dom
IPR037121	Ribosomal_L25_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20947-RA	Carg20947-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037121	Ribosomal protein L25, C-terminal	GENE3D	G3DSA:2.170.120.20		coord: 153..247 e-value: 7.9E-18 score: 66.5
IPR020057	Ribosomal protein L25, beta domain	PFAM	PF14693	Ribosomal_TL5_C	coord: 156..239 e-value: 2.2E-22 score: 79.1
None	No IPR available	PANTHER	PTHR33284	FAMILY NOT NAMED	coord: 1..241
None	No IPR available	PANTHER	PTHR33284:SF2	SUBFAMILY NOT NAMED	coord: 1..241
IPR029751	Ribosomal protein L25	CDD	cd00495	Ribosomal_L25_TL5_CTC	coord: 37..147 e-value: 7.28529E-7 score: 44.3834
IPR011035	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily	SUPERFAMILY	SSF50715	Ribosomal protein L25-like	coord: 42..238

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20947	Cla020131	Watermelon (97103) v1	carwmB0993
Carg20947	Csa2G295950	Cucumber (Chinese Long) v2	carcuB1006
Carg20947	MELO3C020945	Melon (DHL92) v3.5.1	carmeB0967
Carg20947	ClCG02G013310	Watermelon (Charleston Gray)	carwcgB0967
Carg20947	CSPI02G14950	Wild cucumber (PI 183967)	carcpiB1030
Carg20947	Cucsa.250550	Cucumber (Gy14) v1	carcgyB1109
Carg20947	CmaCh20G011220	Cucurbita maxima (Rimu)	carcmaB1374
Carg20947	CmoCh20G011550	Cucurbita moschata (Rifu)	carcmoB1331
Carg20947	Lsi10G006460	Bottle gourd (USVL1VR-Ls)	carlsiB906
Carg20947	Cp4.1LG16g00250	Cucurbita pepo (Zucchini)	carcpeB1378
Carg20947	CsGy2G014940	Cucumber (Gy14) v2	carcgybB0979
Carg20947	MELO3C020945.2	Melon (DHL92) v3.6.1	carmedB0977
Carg20947	CsaV3_2G017490	Cucumber (Chinese Long) v3	carcucB1036
Carg20947	Cla97C02G039000	Watermelon (97103) v2	carwmbB1045
Carg20947	Bhi10G001845	Wax gourd	carwgoB1163

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None