Cla020131 (gene) Watermelon (97103) v1

Overview
NameCla020131
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
Description50S ribosomal protein L25 (AHRD V1 ***- D1AT99_ANACI); contains Interpro domain(s) IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
LocationChr2 : 23360748 .. 23363641 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAGTGGTGGCGCTCCGCCGGAAGGAACCTTAGGTTGGCGGCGTTTTCAAGTGCTAGATCAGAATCGTGTCCATTTTCATCATCTCGAGCTGCTTCATACCATACGATCCAAGCAATACCAAGAGAGTGCAGCGGCAGCCGAATTTCGAGCAGAGATAGAGCTCAGGGAAGAATCCCCGCCGTCGTTTTCAGTCAAAAAATCCTTGAGAAAAACTCCGTCCACCGATCGCCGTCGCGGAAGCATCTGCTCACTACAGAGCAAAAGCAAATCCACTCCATTCTCAAATCCGTTGAGCTCCCTTTCTTTTGCTCCACTAGGTTCAAGCTCCAGATCCGCGCTGGTTCCGGATCTTCAGTCCTTCTTGAATCAGGATCCATCCTTCCAGTCAAAGTAAACCATTCACTTATCTCTACCTGTTTGTTTGTGTTTAATTCAACCTGATTTTTCTTGCATTTTCATGTTATGGAGTAACTGCTTGAGAATTTTCAGATTCATAGGGATGAAGAGACCGGGAAGATTTTGAATATTGTATTTGTATGGGCTGATGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTTAAAGGCGAAGAGACTTGCCCTGGTCTTCAGAAAGGTAACCATGGAAGAAAGGTTTCTTTAATTCCCAAGCTCATGTTAGTCAAATTCTCGGTTTTGTGAATGTGGAATTAATTGGAGCGATTGCAAGATATTGGGGAATTAGTTTATTGAATCCAGAAAATATACTTAGCCATTTATGCAATTTTATTATTGCCAAGATGACACGAAGTTTTATCTTAAGGGAAGTATAAAATCTAGTTTCAATTGGTTTCACAATTTGGTCCCATCACTTTGGCTTTTCCTTACTATACGAAATGTGCACACCCACTATAGAGCGCCACAAGAAATTTCCCAAGACAAGATATCATAAACCCAAAAATAACTATAAGAAAGCTTTCCGATGAAAATTAATTCTAGTAGAAGACTAATTCTTAAATTCGTTGGAAAAAAATACACCAAGAAACCGTGCAATGTTTAATCATCCCAAATCTTTTCCTCCTGGATTGCTCGAAGATTCTATGTTTAATCACCCCAAAGTAAGTAGCGTTAAACACTTGTCAATCCACGTAACTTTACCTTTCTTAATTCAGTCAATGCCTCAGAGTGACATAAAAATGTTGTTTTTAGCTATTAAATCATATGCTTAAGCAATCTGAAGACTTAAGATACTCTCTTCACAAAACTGAGCACTTATTGAGAGAGAGAGAGAGAAAAAAGCATCATTCAAAAAGAACCAAGGGCTCCTATCAAGCAAGATGAAACCTAACGGATAATTACAAAAGTCCATATGCACCTAAGTCTAGAGGGAGGTATGCAATTGGAACCTAACAAGGAACCAAACTTTTTCCTTAGACCGCCCTGCACCTGTGGAATCTTTTCATAAAGGTGAACCAGACCATTATACTGATTTTTCTAGAACATGGGACTGATGCAAATGAAGAAATGGAGTTAAGGAAAGCTCAATTTATAATGTCACTCAGGGGATTTTTGGGCCAAGAAGTTGGGAAGTAGGGAGTTGTGAACTCCACTCTTTGTTTGGTCTAAGGAGTTCATGGATCCCACTACTAAAAATTGTCAATTTTACACCTTATTAACTCCTTACGTTGTGGGCTCCCGGAGTTCACAACTTCCTAGATGCCCCTGTAGTAGCTGTTGATTAGCTAAGAAGTAAGAAGTAGCAGCACACTTTTTTTCTTCAGAGAACTATCTGATACTTTCTTGAATATACAATTAACTGAAAATCCAGGCCTCTAACAAACCTTACCTACATACTTTCATTGTCGCTCAAGGCCTCCCCCCCCCCCACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTTTACCAACCCTTCCCTCCTACCTTCATTGGCGCCCAAGGCCCCCCCCCCCCCCACCTACGTTCATACATGGTACACTTTAGTTATTTGGGGCCTATCAGGGTAACATGTAATGGATACCTATTCTTAAGGTTGCAATTTTGTTGCATTGTAGAATGCTGCAAGTGTATTTGTTTTGTTTTGTTTGCATCGATCACTAGTTAGTAATATAAAGCTTTTTGGACCATTTTTGTGAGCCATGTTAAAACCTTTTATTCATTTGTGATTAACAAACCTTGAGATGTATTGGCTGAAGATGTATCATGAAACATCGACGTCTCTTGGGGAATATATGGCATTTCCGAAGTTCAAACTATGAAACATGGTCAAACTTAGGTAGATGATACACCATTAGCTTTTTCAACTTGTTCTATTATGGTACCCTCTGATGCCTGCAAGGTTTTGCAAATTTGCTGCGACAGTCACAGTTCAGTTTATGATTATGCTGTTTAAACATGGTAAATGAAAGAAGGTTTTGATTGCTATCTGATTGTAGTTAGGATGATAAAGAATTGGAAATTAATATTCTACAATCATGCAAAACTTGTATAGTGTTTCTTTTTTTCCTTTAGTGTAATTTTCCTATCTGAATCTTTATCGGCCTGTCAATTGTCCTTTTGAAATCATATACCTTAATTTTGTGGAACACAGGAGGTCAACTGAACAGGATAAGAACTAGCCTGAAATATCTTTGCCCCGCCGAACACATTCCTTCCAAGATTGAGGTGGATGTAAGTAATCTGGACATCGGGGAGAGAATTTTCATTCGTGACCTAGACGTCCATCCTTCTCTTAAGCTACTTAGCAAGAACGAAGTCATGCCTATATGTAAAATAGTCACAACAAACACGGAAACGGCAAACACAGAAATTTCAGAACCTTCATGA

mRNA sequence

ATGGCCAAGTGGTGGCGCTCCGCCGGAAGGAACCTTAGGTTGGCGGCGTTTTCAAGTGCTAGATCAGAATCGTGTCCATTTTCATCATCTCGAGCTGCTTCATACCATACGATCCAAGCAATACCAAGAGAGTGCAGCGGCAGCCGAATTTCGAGCAGAGATAGAGCTCAGGGAAGAATCCCCGCCGTCGTTTTCAGTCAAAAAATCCTTGAGAAAAACTCCGTCCACCGATCGCCGTCGCGGAAGCATCTGCTCACTACAGAGCAAAAGCAAATCCACTCCATTCTCAAATCCGTTGAGCTCCCTTTCTTTTGCTCCACTAGGTTCAAGCTCCAGATCCGCGCTGGTTCCGGATCTTCAGTCCTTCTTGAATCAGGATCCATCCTTCCAGTCAAAATTCATAGGGATGAAGAGACCGGGAAGATTTTGAATATTGTATTTGTATGGGCTGATGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTTAAAGGCGAAGAGACTTGCCCTGGTCTTCAGAAAGGAGGTCAACTGAACAGGATAAGAACTAGCCTGAAATATCTTTGCCCCGCCGAACACATTCCTTCCAAGATTGAGGTGGATGTAAGTAATCTGGACATCGGGGAGAGAATTTTCATTCGTGACCTAGACGTCCATCCTTCTCTTAAGCTACTTAGCAAGAACGAAGTCATGCCTATATGTAAAATAGTCACAACAAACACGGAAACGGCAAACACAGAAATTTCAGAACCTTCATGA

Coding sequence (CDS)

ATGGCCAAGTGGTGGCGCTCCGCCGGAAGGAACCTTAGGTTGGCGGCGTTTTCAAGTGCTAGATCAGAATCGTGTCCATTTTCATCATCTCGAGCTGCTTCATACCATACGATCCAAGCAATACCAAGAGAGTGCAGCGGCAGCCGAATTTCGAGCAGAGATAGAGCTCAGGGAAGAATCCCCGCCGTCGTTTTCAGTCAAAAAATCCTTGAGAAAAACTCCGTCCACCGATCGCCGTCGCGGAAGCATCTGCTCACTACAGAGCAAAAGCAAATCCACTCCATTCTCAAATCCGTTGAGCTCCCTTTCTTTTGCTCCACTAGGTTCAAGCTCCAGATCCGCGCTGGTTCCGGATCTTCAGTCCTTCTTGAATCAGGATCCATCCTTCCAGTCAAAATTCATAGGGATGAAGAGACCGGGAAGATTTTGAATATTGTATTTGTATGGGCTGATGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTTAAAGGCGAAGAGACTTGCCCTGGTCTTCAGAAAGGAGGTCAACTGAACAGGATAAGAACTAGCCTGAAATATCTTTGCCCCGCCGAACACATTCCTTCCAAGATTGAGGTGGATGTAAGTAATCTGGACATCGGGGAGAGAATTTTCATTCGTGACCTAGACGTCCATCCTTCTCTTAAGCTACTTAGCAAGAACGAAGTCATGCCTATATGTAAAATAGTCACAACAAACACGGAAACGGCAAACACAGAAATTTCAGAACCTTCATGA

Protein sequence

MAKWWRSAGRNLRLAAFSSARSESCPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGRIPAVVFSQKILEKNSVHRSPSRKHLLTTEQKQIHSILKSVELPFFCSTRFKLQIRAGSGSSVLLESGSILPVKIHRDEETGKILNIVFVWADEGSELKVDVPIVFKGEETCPGLQKGGQLNRIRTSLKYLCPAEHIPSKIEVDVSNLDIGERIFIRDLDVHPSLKLLSKNEVMPICKIVTTNTETANTEISEPS
Homology
[Close]
BLAST of Cla020131 vs. Swiss-Prot
Match: RL25_ANAPZ (50S ribosomal protein L25 OS=Anaplasma phagocytophilum (strain HZ) GN=rplY PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.8e-14
Identity = 52/203 (25.62%), Postives = 96/203 (47.29%), Query Frame = 1 

Query: 38  IQAIPRECSGSRISSRDRAQGRIPAVVFSQKILEKNSVHRSPSRKHLLTTEQKQIHSILK 97
           + A  RE  G+  +   RA+G IPAV++ +        +R P     +     Q+  + K
Sbjct: 9   VDASVRERCGTGSARALRARGLIPAVIYGK--------NRDP-----INISLSQVDFLKK 68

Query: 98  SVELPFFCSTRFKLQIRAGSGSSVLLESGSILPVKIHRDEETGKILNIVFVWADEGSELK 157
               P F      +++  G     ++         I +   +G I ++ F + D+ +E+K
Sbjct: 69  CRTFPIFSKL---IELCIGEKKEYVITKD------IQKHPVSGAIAHVDFQFVDQDAEMK 128

Query: 158 VDVPIVFKGEETCPGLQKGGQLNRIRTSLKYLCPAEHIPSKIEVDVSNLDIGERIFIRDL 217
           ++VP+VF  E+ C G+++GG +N +  SL   C   HIP  +EVD+ ++ IG  + + DL
Sbjct: 129 MEVPLVFLNEQKCVGVKRGGVINILHRSLIIRCSPHHIPKSLEVDLIDVAIGHSLHVSDL 188

Query: 218 DVHPSLKLLSKNEVMPICKIVTT 241
            +  ++ ++ K E   I  +V +
Sbjct: 189 KLPSTINVVMKEEDPVIATVVAS 189

[Close]
BLAST of Cla020131 vs. Swiss-Prot
Match: RL25_ANAMM (50S ribosomal protein L25 OS=Anaplasma marginale (strain St. Maries) GN=rplY PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-13
Identity = 61/203 (30.05%), Postives = 95/203 (46.80%), Query Frame = 1 

Query: 38  IQAIPRECSGSRISSRDRAQGRIPAVVFSQKILEKNSVHRSPSRKHLLTTEQKQIHSILK 97
           + A  R   G+  +   RA G IPAVV+ +    +++V+ S S    L           K
Sbjct: 9   VDASVRAKCGTGSARALRAAGLIPAVVYGKN---RDAVNISLSHADFLK----------K 68

Query: 98  SVELPFFCSTRFKLQIRAGSGSSVLLESGSILPVKIHRDEETGKILNIVFVWADEGSELK 157
              LP F S   KL I      ++  E        I +   +G + ++ F + D G+E+K
Sbjct: 69  CRTLPIF-SQLIKLCIDGKEEFALTKE--------IQKHPVSGAVSHVDFQFVDRGAEIK 128

Query: 158 VDVPIVFKGEETCPGLQKGGQLNRIRTSLKYLCPAEHIPSKIEVDVSNLDIGERIFIRDL 217
           V+VP+VF  E+ C G++ GG LN +  SL   C  + IP  +EVD+ +L IG  I + DL
Sbjct: 129 VEVPLVFLNEQKCAGVKLGGALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDL 188

Query: 218 DVHPSLKLLSKNEVMPICKIVTT 241
            +  ++++  K E   I  +  T
Sbjct: 189 ALPETMQVAMKEENPVIASVSAT 189

[Close]
BLAST of Cla020131 vs. Swiss-Prot
Match: RL25_ANAMF (50S ribosomal protein L25 OS=Anaplasma marginale (strain Florida) GN=rplY PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.5e-13
Identity = 60/203 (29.56%), Postives = 95/203 (46.80%), Query Frame = 1 

Query: 38  IQAIPRECSGSRISSRDRAQGRIPAVVFSQKILEKNSVHRSPSRKHLLTTEQKQIHSILK 97
           + A  R   G+  +   RA G IPAVV+ +    +++V+ S S    L           K
Sbjct: 9   VDASVRAKCGTGSARALRAAGLIPAVVYGKN---RDAVNISLSHADFLK----------K 68

Query: 98  SVELPFFCSTRFKLQIRAGSGSSVLLESGSILPVKIHRDEETGKILNIVFVWADEGSELK 157
              LP F S   KL I      ++  E        I +   +G + ++ F + D G+E+K
Sbjct: 69  CRTLPIF-SQLIKLCIDGKEEFALTKE--------IQKHPVSGAVSHVDFQFVDRGAEIK 128

Query: 158 VDVPIVFKGEETCPGLQKGGQLNRIRTSLKYLCPAEHIPSKIEVDVSNLDIGERIFIRDL 217
           V+VP+VF  E+ C G++ GG LN +  SL   C  + IP  +EVD+ +L IG  I + DL
Sbjct: 129 VEVPLVFLNEQKCAGVKLGGALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDL 188

Query: 218 DVHPSLKLLSKNEVMPICKIVTT 241
            +  ++++  K E   +  +  T
Sbjct: 189 ALPETMQVAMKEENPVVASVSAT 189

[Close]
BLAST of Cla020131 vs. Swiss-Prot
Match: RL25_EHRRW (50S ribosomal protein L25 OS=Ehrlichia ruminantium (strain Welgevonden) GN=rplY PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-13
Identity = 62/205 (30.24%), Postives = 94/205 (45.85%), Query Frame = 1 

Query: 43  RECSGSRISSRDRAQGRIPAVVFSQKILEKNSVHRSPSRKHLLTTEQKQIHSILKSVELP 102
           R   G+  S   R  G IPAVV+ +        HRSP   +L   E              
Sbjct: 14  RNSVGTGPSRTLRRNGAIPAVVYGK--------HRSPLSIYLSDRE-------------- 73

Query: 103 FFCSTRFKLQIRAGSGSSVLLESGS----ILPVKIHRDEETGKILNIVFVWADEGSELKV 162
            F S   K +  A S   + LE G     +L   I +   T +I ++ F + D G+E+K+
Sbjct: 74  -FLS---KYRSAALSTHLIELEIGEKKEYVLMRDIQKHPVTDRIQHVDFQFIDHGTEIKI 133

Query: 163 DVPIVFKGEETCPGLQKGGQLNRIRTSLKYLCPAEHIPSKIEVDVSNLDIGERIFIRDLD 222
           +VP+VF  E+ C G++KGG LN +  +L   C    I   IEVD++NL IG  I + DL+
Sbjct: 134 EVPLVFVNEQRCVGVKKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDLN 192

Query: 223 VHPSLKLLSKNEVMPICKIVTTNTE 244
           +   + ++ K     +  I  T+++
Sbjct: 194 LPSEVTVVMKEHNPTLVTISGTSSD 192

[Close]
BLAST of Cla020131 vs. Swiss-Prot
Match: RL25_EHRRG (50S ribosomal protein L25 OS=Ehrlichia ruminantium (strain Gardel) GN=rplY PE=3 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-13
Identity = 62/205 (30.24%), Postives = 94/205 (45.85%), Query Frame = 1 

Query: 43  RECSGSRISSRDRAQGRIPAVVFSQKILEKNSVHRSPSRKHLLTTEQKQIHSILKSVELP 102
           R   G+  S   R  G IPAVV+ +        HRSP   +L   E              
Sbjct: 14  RNSVGTGPSRTLRRNGAIPAVVYGK--------HRSPLSIYLSDRE-------------- 73

Query: 103 FFCSTRFKLQIRAGSGSSVLLESGS----ILPVKIHRDEETGKILNIVFVWADEGSELKV 162
            F S   K +  A S   + LE G     +L   I +   T +I ++ F + D G+E+K+
Sbjct: 74  -FLS---KYRSAALSTHLIELEIGEKKEYVLMRDIQKHPVTDRIQHVDFQFIDHGTEIKI 133

Query: 163 DVPIVFKGEETCPGLQKGGQLNRIRTSLKYLCPAEHIPSKIEVDVSNLDIGERIFIRDLD 222
           +VP+VF  E+ C G++KGG LN +  +L   C    I   IEVD++NL IG  I + DL+
Sbjct: 134 EVPLVFVNEQRCVGVKKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDLN 192

Query: 223 VHPSLKLLSKNEVMPICKIVTTNTE 244
           +   + ++ K     +  I  T+++
Sbjct: 194 LPSEVTVVMKEHNPTLVTISGTSSD 192

[Close]
BLAST of Cla020131 vs. TrEMBL
Match: A0A0A0LJM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G295950 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 1.6e-120
Identity = 223/253 (88.14%), Postives = 235/253 (92.89%), Query Frame = 1 

Query: 1   MAKWWRSAGRNLRLAAFSSARSESCPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGRI 60
           MA WWRSA  NLRLAAFS  +SES PFSS RAA YHTIQAIPRECSG +ISS+DRAQGRI
Sbjct: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAA-YHTIQAIPRECSGRKISSKDRAQGRI 60

Query: 61  PAVVFSQKILEKNSVHRSPSRKHLLTTEQKQIHSILKSVELPFFCSTRFKLQIRAGSGSS 120
           PAVVFSQ+ILEKNSVH SPSRKHLLTTE+KQIHSILKSVELPFFCSTRFKLQIRAGSGSS
Sbjct: 61  PAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSS 120

Query: 121 VLLESGSILPVKIHRDEETGKILNIVFVWADEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILP+KIHR+EETGKI NIVFVWADEGSELKVDVPIVFKGEE CPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180

Query: 181 RIRTSLKYLCPAEHIPSKIEVDVSNLDIGERIFIRDLDVHPSLKLLSKNEVMPICKIVTT 240
           +IRTSLKYLCPAEHIPSKIEVDVSNLDIG+RIFIRD+DVH S+KLLSKNEVMPICKIVT 
Sbjct: 181 KIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTI 240

Query: 241 NTETANTEISEPS 254
            +ETANTE S  S
Sbjct: 241 KSETANTETSATS 252

[Close]
BLAST of Cla020131 vs. TrEMBL
Match: A0A059ALZ6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00975 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 3.1e-95
Identity = 176/250 (70.40%), Postives = 209/250 (83.60%), Query Frame = 1 

Query: 1   MAKWWRSAGRN-LRLAAFSSARSESCPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGR 60
           MA+WWR+A    L+ AA SS      P     ++SYHTIQAIPRECSGSR++SRDRAQGR
Sbjct: 1   MARWWRAAAAGGLKTAALSSPPP---PVRPPPSSSYHTIQAIPRECSGSRVASRDRAQGR 60

Query: 61  IPAVVFSQKILEKNSVHRSPSRKHLLTTEQKQIHSILKSVELPFFCSTRFKLQIRAGSGS 120
           IP VVF+Q +LEK+   RSPSRK+LLTTE+KQI SIL SV LPFFCST F LQIRAGSGS
Sbjct: 61  IPTVVFAQGLLEKDPGARSPSRKYLLTTERKQIKSILSSVRLPFFCSTTFGLQIRAGSGS 120

Query: 121 SVLLESGSILPVKIHRDEETGKILNIVFVWADEGSELKVDVPIVFKGEETCPGLQKGGQL 180
           S LLESG +LPVK+HRDEETGKILN+V VWADEGS+LKVDVP+ FKGEE CPGL+KGG L
Sbjct: 121 STLLESGKVLPVKVHRDEETGKILNLVLVWADEGSKLKVDVPVAFKGEEVCPGLKKGGYL 180

Query: 181 NRIRTSLKYLCPAEHIPSKIEVDVSNLDIGERIFIRDLDVHPSLKLLSKNEVMPICKIVT 240
           N IRTSLK+ CPAEHIPSKIEVDVSNLDIG+RIF+RD++ HPS++LLSKN+ +PICK+++
Sbjct: 181 NAIRTSLKFTCPAEHIPSKIEVDVSNLDIGDRIFMRDVEFHPSMELLSKNDAIPICKVMS 240

Query: 241 TNTETANTEI 250
           T +E+A   +
Sbjct: 241 TKSESAEPAV 247

[Close]
BLAST of Cla020131 vs. TrEMBL
Match: A0A061DG52_THECC (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain OS=Theobroma cacao GN=TCM_000561 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 8.4e-93
Identity = 167/209 (79.90%), Postives = 192/209 (91.87%), Query Frame = 1 

Query: 35  YHTIQAIPRECSGSRISSRDRAQGRIPAVVFSQKILEKNSVHRSPSRKHLLTTEQKQIHS 94
           YHTIQAIPREC+G+R+S+RDRAQGRIPAVVFSQ +LEK+  +RSPSRK LLTTE+KQI +
Sbjct: 22  YHTIQAIPRECTGNRVSTRDRAQGRIPAVVFSQGLLEKSPANRSPSRKQLLTTERKQIQT 81

Query: 95  ILKSVELPFFCSTRFKLQIRAGSGSSVLLESGSILPVKIHRDEETGKILNIVFVWADEGS 154
           ILKSV+LPFFCST F LQIRAGSGSSVLL+SG +LP+KIHRDEE+GKILN+VFVWADEG+
Sbjct: 82  ILKSVQLPFFCSTTFPLQIRAGSGSSVLLDSGRVLPIKIHRDEESGKILNLVFVWADEGT 141

Query: 155 ELKVDVPIVFKGEETCPGLQKGGQLNRIRTSLKYLCPAEHIPSKIEVDVSNLDIGERIFI 214
           +LKVDVP+VFKGEE CPGL+KGG LNRIRTSLKYLCPAEHIP KIEVDVS LDIG+R+ +
Sbjct: 142 KLKVDVPVVFKGEEDCPGLKKGGSLNRIRTSLKYLCPAEHIPPKIEVDVSKLDIGDRVLM 201

Query: 215 RDLDVHPSLKLLSKNEVMPICKIVTTNTE 244
            D++VHPSLKLLSKNE MP+CKIV TN E
Sbjct: 202 HDVEVHPSLKLLSKNESMPMCKIVATNFE 230

[Close]
BLAST of Cla020131 vs. TrEMBL
Match: B9S8K5_RICCO (50S ribosomal protein L25, putative OS=Ricinus communis GN=RCOM_0602110 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 5.4e-92
Identity = 173/252 (68.65%), Postives = 209/252 (82.94%), Query Frame = 1 

Query: 1   MAKWWRSAGRNLRLAAFSSARSESCPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGRI 60
           MAKW R            +    S P  +S+++ YHTIQAIPREC+GSR+++RDRAQGRI
Sbjct: 1   MAKWLRG---------LKTVVQSSSPSLNSQSSFYHTIQAIPRECTGSRVAARDRAQGRI 60

Query: 61  PAVVFSQKILEKNSVHRSPSRKHLLTTEQKQIHSILKSVELPFFCSTRFKLQIRAGSGSS 120
           PAVVFSQ +L+KN   RS SRK LLTTE+KQI SIL SVELPFFCST F LQIRAGSGSS
Sbjct: 61  PAVVFSQSLLDKNPNSRSISRKQLLTTERKQIQSILTSVELPFFCSTTFNLQIRAGSGSS 120

Query: 121 VLLESGSILPVKIHRDEETGKILNIVFVWADEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VL+ESG+ILP+K+HRDEETGKILN+VFVWAD+G+ELKVDVP++FKGEE CPGL+KGG+LN
Sbjct: 121 VLIESGTILPIKVHRDEETGKILNLVFVWADDGTELKVDVPLIFKGEEDCPGLKKGGKLN 180

Query: 181 RIRTSLKYLCPAEHIPSKIEVDVSNLDIGERIFIRDLDVHPSLKLLSKNEVMPICKIVTT 240
           RIR SLK LCPAEHIP K+EVDVS+LDIG+++ + D++VHPSLKLLSKNE +PICKIV+T
Sbjct: 181 RIRKSLKVLCPAEHIPPKLEVDVSSLDIGDKVSMGDVEVHPSLKLLSKNENIPICKIVST 240

Query: 241 NTETANTEISEP 253
           + E+   E +EP
Sbjct: 241 DLESPEPE-TEP 242

[Close]
BLAST of Cla020131 vs. TrEMBL
Match: A0A067GVH3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026232mg PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 4.6e-91
Identity = 165/224 (73.66%), Postives = 196/224 (87.50%), Query Frame = 1 

Query: 20  ARSESCPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGRIPAVVFSQKILEKNSVHRSP 79
           A +   PFS +  + YHTIQAIPREC+GSR+S+RDR+QGRIPAVVF+Q +L+KN+  RSP
Sbjct: 12  AHNSRTPFSRT-TSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSP 71

Query: 80  SRKHLLTTEQKQIHSILKSVELPFFCSTRFKLQIRAGSGSSVLLESGSILPVKIHRDEET 139
           SRK +L+TE+KQIHSILKSVELPFFCST F LQIRAGSGSSVLL+SG +LP+K+HRDEET
Sbjct: 72  SRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEET 131

Query: 140 GKILNIVFVWADEGSELKVDVPIVFKGEETCPGLQKGGQLNRIRTSLKYLCPAEHIPSKI 199
           G+ILN+VFVWAD+G+ELKVDVP+VFKG E+CPGL+KGG L  IRTSLKYLCPAEHI  KI
Sbjct: 132 GRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKI 191

Query: 200 EVDVSNLDIGERIFIRDLDVHPSLKLLSKNEVMPICKIVTTNTE 244
           EVDVSNLDIG+R+F+ D++VHPS KLLSKNE MP+CKI  T  E
Sbjct: 192 EVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLE 234

[Close]
BLAST of Cla020131 vs. NCBI nr
Match: gi|449461415|ref|XP_004148437.1| (PREDICTED: uncharacterized protein LOC101208580 [Cucumis sativus])

HSP 1 Score: 440.3 bits (1131), Expect = 2.3e-120
Identity = 223/253 (88.14%), Postives = 235/253 (92.89%), Query Frame = 1 

Query: 1   MAKWWRSAGRNLRLAAFSSARSESCPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGRI 60
           MA WWRSA  NLRLAAFS  +SES PFSS RAA YHTIQAIPRECSG +ISS+DRAQGRI
Sbjct: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAA-YHTIQAIPRECSGRKISSKDRAQGRI 60

Query: 61  PAVVFSQKILEKNSVHRSPSRKHLLTTEQKQIHSILKSVELPFFCSTRFKLQIRAGSGSS 120
           PAVVFSQ+ILEKNSVH SPSRKHLLTTE+KQIHSILKSVELPFFCSTRFKLQIRAGSGSS
Sbjct: 61  PAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSS 120

Query: 121 VLLESGSILPVKIHRDEETGKILNIVFVWADEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILP+KIHR+EETGKI NIVFVWADEGSELKVDVPIVFKGEE CPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180

Query: 181 RIRTSLKYLCPAEHIPSKIEVDVSNLDIGERIFIRDLDVHPSLKLLSKNEVMPICKIVTT 240
           +IRTSLKYLCPAEHIPSKIEVDVSNLDIG+RIFIRD+DVH S+KLLSKNEVMPICKIVT 
Sbjct: 181 KIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTI 240

Query: 241 NTETANTEISEPS 254
            +ETANTE S  S
Sbjct: 241 KSETANTETSATS 252

[Close]
BLAST of Cla020131 vs. NCBI nr
Match: gi|659116072|ref|XP_008457885.1| (PREDICTED: uncharacterized protein LOC103497462 [Cucumis melo])

HSP 1 Score: 438.3 bits (1126), Expect = 8.8e-120
Identity = 220/253 (86.96%), Postives = 235/253 (92.89%), Query Frame = 1 

Query: 1   MAKWWRSAGRNLRLAAFSSARSESCPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGRI 60
           MAKWWRSAG NLR A  S  +SES PFSS RAA YHTIQAIPRECSG +ISS+DRAQGRI
Sbjct: 1   MAKWWRSAGTNLRWAVLSGTKSESFPFSSFRAA-YHTIQAIPRECSGRKISSKDRAQGRI 60

Query: 61  PAVVFSQKILEKNSVHRSPSRKHLLTTEQKQIHSILKSVELPFFCSTRFKLQIRAGSGSS 120
           PAVVFSQ++LEKN VH SPSRKHLLTTE+KQIHSILKSV+LPFFCSTRF+LQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNPVHGSPSRKHLLTTERKQIHSILKSVKLPFFCSTRFQLQIRAGSGSS 120

Query: 121 VLLESGSILPVKIHRDEETGKILNIVFVWADEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILP+KIHR+EETGKI NIVFVWADEGSELKVDVPIVFKGEE CPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180

Query: 181 RIRTSLKYLCPAEHIPSKIEVDVSNLDIGERIFIRDLDVHPSLKLLSKNEVMPICKIVTT 240
           +IRTSLKYLCPAEHIPSKIEVDVSNLDIG+RIFIRD+DVHPSLKLLSKNEVMPICKIVTT
Sbjct: 181 KIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 NTETANTEISEPS 254
            ++T NTE SE S
Sbjct: 241 KSKTENTEASETS 252

[Close]
BLAST of Cla020131 vs. NCBI nr
Match: gi|1009144881|ref|XP_015890040.1| (PREDICTED: 50S ribosomal protein L25-like [Ziziphus jujuba])

HSP 1 Score: 360.9 bits (925), Expect = 1.8e-96
Identity = 178/246 (72.36%), Postives = 207/246 (84.15%), Query Frame = 1 

Query: 1   MAKWWRSAGRNLRLAAFSSARSESC--PFSSSRAASYHTIQAIPRECSGSRISSRDRAQG 60
           MAKWWRS    L+    + A       P   SRA  YHTIQAIPREC GS +S +DRAQG
Sbjct: 1   MAKWWRSGAHGLKTVVENPALQSWAWPPRLLSRATLYHTIQAIPRECCGSGVSVKDRAQG 60

Query: 61  RIPAVVFSQKILEKNSVHRSPSRKHLLTTEQKQIHSILKSVELPFFCSTRFKLQIRAGSG 120
           RIPAVVFSQ +L+KN  +RS S+KHL+TTE+KQI +ILKSV+LPFFCST F LQIRAGSG
Sbjct: 61  RIPAVVFSQSLLDKNPSNRSASKKHLVTTERKQIQAILKSVQLPFFCSTTFPLQIRAGSG 120

Query: 121 SSVLLESGSILPVKIHRDEETGKILNIVFVWADEGSELKVDVPIVFKGEETCPGLQKGGQ 180
           SSVLLESG++LP+KIHRDEETGKILN+VFVWA++GSELKVDVP+VFKGE+ CPGL+KGG 
Sbjct: 121 SSVLLESGNVLPIKIHRDEETGKILNLVFVWAEDGSELKVDVPVVFKGEDKCPGLKKGGY 180

Query: 181 LNRIRTSLKYLCPAEHIPSKIEVDVSNLDIGERIFIRDLDVHPSLKLLSKNEVMPICKIV 240
           LNRIRTSL+YLCPAEHIP KIEVDVS+LDIG+RI++ D+ VHPSLKLLSKNE MP+CKIV
Sbjct: 181 LNRIRTSLRYLCPAEHIPPKIEVDVSSLDIGDRIYMHDVQVHPSLKLLSKNENMPMCKIV 240

Query: 241 TTNTET 245
           TT  E+
Sbjct: 241 TTKLES 246

[Close]
BLAST of Cla020131 vs. NCBI nr
Match: gi|645272726|ref|XP_008241535.1| (PREDICTED: uncharacterized protein LOC103339950 [Prunus mume])

HSP 1 Score: 359.0 bits (920), Expect = 6.8e-96
Identity = 176/243 (72.43%), Postives = 206/243 (84.77%), Query Frame = 1 

Query: 1   MAKWWRSAGRNLRLAAFSSARSESCPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGRI 60
           MA  WRSAG NLR      +  +  PF S  +A YHTIQAIPREC+G+R+S +DRAQGRI
Sbjct: 1   MANRWRSAGGNLRAVLQHPSSRQQAPFQSF-SALYHTIQAIPRECTGNRVSVKDRAQGRI 60

Query: 61  PAVVFSQKILEKNSVHRSPSRKHLLTTEQKQIHSILKSVELPFFCSTRFKLQIRAGSGSS 120
           PAVVFSQ++    +  RS S+KHLLTTE+KQI +ILKSVELPFFCSTRF LQIRAGSGSS
Sbjct: 61  PAVVFSQELNPSTTTVRSVSKKHLLTTERKQIQAILKSVELPFFCSTRFPLQIRAGSGSS 120

Query: 121 VLLESGSILPVKIHRDEETGKILNIVFVWADEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
            LLESG++LP+KIHRDEE+GKILN+VFVWADEGS+LKVDVP+VFKGE+ CPGL+KGG LN
Sbjct: 121 DLLESGNVLPIKIHRDEESGKILNLVFVWADEGSQLKVDVPVVFKGEDVCPGLKKGGHLN 180

Query: 181 RIRTSLKYLCPAEHIPSKIEVDVSNLDIGERIFIRDLDVHPSLKLLSKNEVMPICKIVTT 240
           +IRT+LKYLCPAEHIP KIEVD+S LDIG+R+FI D++VHPS+KLLSKNE MPICKIV T
Sbjct: 181 KIRTTLKYLCPAEHIPHKIEVDISKLDIGDRVFIPDVEVHPSMKLLSKNETMPICKIVAT 240

Query: 241 NTE 244
             E
Sbjct: 241 KLE 242

[Close]
BLAST of Cla020131 vs. NCBI nr
Match: gi|694381407|ref|XP_009366785.1| (PREDICTED: uncharacterized protein LOC103956509 [Pyrus x bretschneideri])

HSP 1 Score: 356.7 bits (914), Expect = 3.4e-95
Identity = 178/243 (73.25%), Postives = 208/243 (85.60%), Query Frame = 1 

Query: 1   MAKWWRSAGRNLRLAAFSSARSESCPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGRI 60
           MA  WR+AG +LR    + +     PFSS  AA YHTIQAIPRE +G+R+S +DRAQGRI
Sbjct: 1   MANRWRAAGSSLRAVLQNPSSGPQPPFSSF-AAMYHTIQAIPREVTGNRVSVKDRAQGRI 60

Query: 61  PAVVFSQKILEKNSVHRSPSRKHLLTTEQKQIHSILKSVELPFFCSTRFKLQIRAGSGSS 120
           PAVVFSQ++   ++  R  SRKHLLTTE+KQI +ILKSVELPFFCSTRF LQIRAGSGSS
Sbjct: 61  PAVVFSQQLNPTSAAARPVSRKHLLTTERKQIQAILKSVELPFFCSTRFPLQIRAGSGSS 120

Query: 121 VLLESGSILPVKIHRDEETGKILNIVFVWADEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
            LLESG+++P+KIHRDEE+GKILN+VFVWADEGSELKVDVP+VFKGE+ CPGL+KGG LN
Sbjct: 121 DLLESGNVIPIKIHRDEESGKILNLVFVWADEGSELKVDVPVVFKGEDVCPGLKKGGHLN 180

Query: 181 RIRTSLKYLCPAEHIPSKIEVDVSNLDIGERIFIRDLDVHPSLKLLSKNEVMPICKIVTT 240
           +IRTSLKYL PAEHIP+KIEVDVSNLDIG+R+FI D++VHPS+KLLSKNE MPICKIV T
Sbjct: 181 KIRTSLKYLGPAEHIPTKIEVDVSNLDIGDRVFIPDVEVHPSMKLLSKNETMPICKIVAT 240

Query: 241 NTE 244
           N E
Sbjct: 241 NLE 242

The following BLAST results are available for this feature:
BLAST of Cla020131 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL25_ANAPZ3.8e-1425.6250S ribosomal protein L25 OS=Anaplasma phagocytophilum (strain HZ) GN=rplY PE=3 ... [more]
RL25_ANAMM1.1e-1330.0550S ribosomal protein L25 OS=Anaplasma marginale (strain St. Maries) GN=rplY PE=... [more]
RL25_ANAMF1.5e-1329.5650S ribosomal protein L25 OS=Anaplasma marginale (strain Florida) GN=rplY PE=3 S... [more]
RL25_EHRRW1.9e-1330.2450S ribosomal protein L25 OS=Ehrlichia ruminantium (strain Welgevonden) GN=rplY ... [more]
RL25_EHRRG1.9e-1330.2450S ribosomal protein L25 OS=Ehrlichia ruminantium (strain Gardel) GN=rplY PE=3 ... [more]
BLAST of Cla020131 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJM8_CUCSA1.6e-12088.14Uncharacterized protein OS=Cucumis sativus GN=Csa_2G295950 PE=4 SV=1[more]
A0A059ALZ6_EUCGR3.1e-9570.40Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00975 PE=4 SV=1[more]
A0A061DG52_THECC8.4e-9379.90Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain OS=Theobrom... [more]
B9S8K5_RICCO5.4e-9268.6550S ribosomal protein L25, putative OS=Ricinus communis GN=RCOM_0602110 PE=4 SV=... [more]
A0A067GVH3_CITSI4.6e-9173.66Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026232mg PE=4 SV=1[more]
BLAST of Cla020131 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461415|ref|XP_004148437.1|2.3e-12088.14PREDICTED: uncharacterized protein LOC101208580 [Cucumis sativus][more]
gi|659116072|ref|XP_008457885.1|8.8e-12086.96PREDICTED: uncharacterized protein LOC103497462 [Cucumis melo][more]
gi|1009144881|ref|XP_015890040.1|1.8e-9672.36PREDICTED: 50S ribosomal protein L25-like [Ziziphus jujuba][more]
gi|645272726|ref|XP_008241535.1|6.8e-9672.43PREDICTED: uncharacterized protein LOC103339950 [Prunus mume][more]
gi|694381407|ref|XP_009366785.1|3.4e-9573.25PREDICTED: uncharacterized protein LOC103956509 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011035Ribosomal_L25/Gln-tRNA_synth
IPR020056Rbsml_L25/Gln-tRNA_synth_N
IPR020057Ribosomal_L25_b-dom
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:00080975S rRNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006418 tRNA aminoacylation for protein translation
biological_process GO:0006412 translation
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
cellular_component GO:0005575 cellular_component
cellular_component GO:0022625 cytosolic large ribosomal subunit
molecular_function GO:0008097 5S rRNA binding
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU05589watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU37167watermelon unigene v2 vs TrEMBLtranscribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla020131Cla020131.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU05589WMU05589transcribed_cluster
WMU37167WMU37167transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011035Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domainunknownSSF50715Ribosomal protein L25-likecoord: 42..238
score: 5.23
IPR020056Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domainGENE3DG3DSA:2.40.240.10coord: 37..147
score: 8.
IPR020057Ribosomal protein L25, beta domainGENE3DG3DSA:2.170.120.20coord: 153..245
score: 4.9
IPR020057Ribosomal protein L25, beta domainPFAMPF14693Ribosomal_TL5_Ccoord: 156..239
score: 2.1
NoneNo IPR availablePANTHERPTHR33284FAMILY NOT NAMEDcoord: 1..251
score: 9.4E
NoneNo IPR availablePANTHERPTHR33284:SF2SUBFAMILY NOT NAMEDcoord: 1..251
score: 9.4E