Cucsa.240710 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.240710
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Peptidyl-prolyl cis-trans isomerase
Location	scaffold02047 : 847143 .. 851840 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTCTCTCGCTCTCCTTCCGTCCTCAATTTTTCTGGGTTTGTATTGTACTCTTCTTAGAATTCTCTTCTCCTTTGTATTATTCATCGAGATAAAACGATACATTTCTTTGTTGGCGTAACCACATCATTTTTAGCCTTAGAATGCATGGAATGCCCTTCCCGGCTTTTCCATATTCTCCATTTCTGCATTCTTTAATTGCCTACGTGGTATGGAATGGGGATCTTTGACTACCGAGATTTTAAGGCACACGGAGAACATGAATAAGAACATTTCTAATTTTACTTTTGGGTTGAACGCGAATTAATACTGATTTCTTATAGCTTAAGCTGCTGGGAGTTGCAAAATTGTTATGTAGATATGCATCCAGAAGTGTCTACTTTTATGGATTTTCTTTATTGAGTTCTTGCCTTTTAGCGCGCCAGTCTGTGGAATCTGCTTGCCCGTTTAATTTTCGGAATGCCATTTCACCAGATGGCTCGTGATTTTTGCTTAGTGTCTCTCTGGCCGATTGACTTAACGGTTTTTATCCTTCGTCCTTTGAATGCTTAATGCCAAAGGTTGAAGGACAAGGAACTATATCATATGAGTTAGTGGTATTTTGCTCTCTTTTTTGCTAGCTTCTCGACTTTTATGGACTTTCAATTTTTTTAATTTGGTTCATTTATCGATTAAATTTTTGTATCATCTAGTATAAAAAATACGGTTCATTTATGATATATCATTTTTAAATAATTTTTTTAATATGATTCATTTATGATATATCATTTCTATATCATTTTAGTGGTAAACAAGACAAAATCATAAAGTAGTGGCACTCCTGTTAAGGATATCAACAGTGGGCGTTGTGCTTATAAATAGAGGTGTTTAGAGTTGAGGATTAGGCAAAACTTTTGGAATCAGTTGTCTCCTGATAGAGAGATAATCCTCTCCATAGTCTATTGTCATTGTATGATGTTGCAATATAGACTTATTGTATCCTATCATATTAATAACAAACCAAAACAACAAATTGTAAACTTCTCAGTTTCCCAGAAAGGGAAATATCTTTTGTGAAATTTCCTGACTAAAAACATAAGTCACGAAGTCTCACAACTTCTTTCAGGCTGGATGGGTGTTTAATGTTTCAAATTGTTCTTTTAACACAATTATTTCGAACCTCAAGTCTGAGACTAGATACCTTTATCAGAAGATACTCACTTCTTGACAGCTTATCAATGCCTGCTATTGTAGTTTCCACAAAACCATTGGCATGGATGAGGATGTATCCATATCCAAGCATCCCATGGTCAATCATTTGGACGTCAGGAACGCATCATTTTCTGTCAAAAGATTTCCAAGAAGGTTGTTCTCACAGTTCATTGGTTTGTATCCAATCTTGTTATATGCATATCCTAGTTTCAGCGCCCCAATGATGGACATGCAAGAACCTGACATAGTTCGGTATGTATTTCATTTGTAATTTTCTCTTGAAATGTTTCTATCATTCTCATAACCTCACAGCGGAGGGGGCTTTCATGACCATTCATCAAAAGTTCTTCACATGTTCATTTGGAATTGTTGTTTAAATTTTGAAGCTTTCAGGACACTGAAGCTTGACAGTGGAGTTAGGATTCAAGGTAGAATTTCTTGATCCCCACCTAGTATCAGGCTTCTTTCTTTTTTCACTTTTTCTTGGGTTAAAAAATAAACTTATTTACTTTTTTTTGTACTGTTCGCTTTTAAAACCAGTCTTGAAAACTCAAGGTTTTATAAAACTTTTAAAAGGCCGTCACCAGCAAAAATATTGGTCTATTATAAATGTTATCAAACAAGATCTTAATTTCTCTTTGTGATATCATTTTGAAAAGAAGGTTTCCTGTTAATGTTAGCAGTGAGAGCACATTTGGTAAAAATGCAGCAGGCTAGCTTTATTACATTATAAACATGTACTAGCTTCAGTTCCTTCTTCATACTAATTGGGATGAAACTATGGTCTCCTTGATAGCCATTTGGTTTTTGAAAATTAAGCCTATTTTCTCTTAATTTCTTGTAATGGTTTCGTCTTTTTAAGTAAAAGAGTTGAATTCTTTGTTAAATTAAAAAATATATATTTTTGAAGAACTCCTTTTTTTAATTTTCAAAACTTGGTTTTGTTTTTAAAAATCTGGGTAGAAAGAAGATGGTAAAACAAGAAATTTAAAGGTGGAAGTGGTGTTTATAGGCTTAATTTTCAAAAAACAAAAAAACAAAAAACCAATGGTTACCTAATGATGCCTACATTATTTTGTTATTCTGTGTTCTATGACTCTTCTATATAATTCTTGAATATGAAAACAAATGAGGTATGTGATTGTTCACTGTAATAATAACATTCTTAGTACCAATTGATAGAAGTTTTTGAGGGAGATGGAGCAGAAGCACATGAAGGAGACATGGTGGAGTTCAATTATGTCTGCAGGCGTTCAAATGGATATTTTGTTCACAGGTAAATGTATTTCTCTTGCATACAACAGCCAACTGTGCAAATTTGTTGGTGCCTTTATAGCCAATTTATCATTATATTTTCAGTCTTTCCCAATGCTTCTGTTGTCATATTCACAGCACTGTTGATCAATTCAGTGGAGAAAGCACACCGGTAATCCTGCCTTTGAAAGAAAATCAGGTAGTCGCTTCTTTTATATAAGTTTGAATGGATATAATGCCTAATGGCCGTATAGTTGTGCTTGCTGTTCATTTTAATTGTTTGAAAATTCTTGACGTTGCATCAACGTAGACTACTCGCATTGCAATATTATTGATAATCATTGACTGGAGGTTAGTTCATGGGCTTAAAAAGTAGCCTAAGATTGGAAAGTTTGGATATAATTATCATGAAGTGTAACTAACAATGTCAAAATCTTGGGTTTATACAGCCCATCACAAGAACTTGATTATATTTGGCAAATGCTCTGTTAGTTCGATCATATTTTTTTTCCTCCTTTAGATGCCAAAGCTCCTATATCGCCACTTATGCTAGCTGCAGCGAATAAATATTCGTAGTTTGCTTGGTCTGCTTTCAAGTTTTATGTCATTCAATAGTGGATATGCACATCATTCTTGTTAGAAAAAATCACCACATTTTTTGTGTTTTTCACTGATATTTTATTTCTTAAAGATAATAGAGGGCTTAAAGGAGGTGCTGGTTGGCATGAGAGTTGGAGGTATTTATGGATATTTTATCATCAAGTTTTGCTTTTAATGATTGGTTCGTTAAATAACATAAAAGTATGTTTAAATATTTTTTGTTTGCTCTATTTGTTCTTCATATCGTTTCAACATTGCCTCTCACTGTTCGTGGCTTGTATTCTTTATTATGCCTTTTATCATTTCCAAACCTTCCTCAACTTCATTGCATTAGCCTTGTATACGAGGTTTCTATTGGCTCACCCTCTTCCTTTTATATTCCCAACTTGTTCTAAATGTATTTTTCAAGTTTTTTAATAGTTAGAAAGTAAATTAGGAAACTAGAAGATTCCCGATGGGTGGAAAAACAGTTTTTAAACCCCTTCTTCATAATTGATGCAGGATTAGTTTACAAAAATATTAGGAATACTCGTAAATGTAGCAATTATATTCAAAATAATTAAGTATATAGCAACGTTTTAAAAAAGTTTGCTAATATAACAAAATTTGTCCAAGTCTATCAAGGATAGAAGTGTATCACTGATAAACTGTATTGCAAATATTGGTCTACTAGTGATAGACCATAAAAGTATTAGTGATAGAAGTCTATCACCGATAGATTTTGCTATATTTGCAATTTTTTTAAAAAATGTTGCTTATACTTAATTATTATTCCTAAAATTGTTACCAATTATAATTTTGCTAAATGTTATTAGAAAATCTTTAATATTTCCGACCTCTCAACCTTTTTTAATAGACTTTTTAACTTTACAACAGTTTTCAAGCACTTATAAAGTCATTTCAAACAAATCTTCATTTGTTTCATGACTAGTAGCAAAAATAGAGGATCAGAAGCTTGATCGACAACGTTTAATTTGCACATATATTAATTGAAGATTTCTCAAAGATTCTTTTGTGAATAACAAACTTTAGTCTACGAGGAATTGCCAGTTTTCCTTTAACAGAGAAATCTGTCATTCTCTTTGTTGTTATGTTTACCAATTTCATTATTATTATTTGTTATCAGGAAAAAGAAGAGCACTTATCCCTCCCTCTGTTGGTTACATAAATGAAAATTTGAACCCGATTCCTGAAGAGGTAATGCTGATCAGTTTCTCATTAATCATTCTTTGATTAGCATAAACATTACTGATTATCCATCATAATCACTTTTTCCTTTGTCATATTTCTTAAAGTCGACAACATTAGCAGTTAATAAAATTAAGTACGTCTGGTTGCAGTTTGGTCCTCGACGTAGTCTGTTATCACATCGGAATGAGCCCTTGATATTTGAGGTGCAACTTTTGAAAGTACTTTGAGTTTCATTTTCTCTCTGTATTGCTTTCGATTTCTATTCACCTCTGTCCATTCTGTTGAATTAAATCATTGTATATTTAATATTTGATAGCATCTATTTATCAGTCTTGTTATGCTCCAACACAAACAAGATTGGGTAAGATGACTGTCTTTCTTCTTTTTTTGGACCCTTTGTCACAAGATAAATATTCGATCTTAGAATTATAGGATAGAAAATAATATTATTGTTGTTGTAGAG

mRNA sequence

CCTTCTCTCGCTCTCCTTCCGTCCTCAATTTTTCTGGTTTCCACAAAACCATTGGCATGGATGAGGATGTATCCATATCCAAGCATCCCATGGTCAATCATTTGGACGTCAGGAACGCATCATTTTCTGTCAAAAGATTTCCAAGAAGGTTGTTCTCACAGTTCATTGGTTTGTATCCAATCTTGTTATATGCATATCCTAGTTTCAGCGCCCCAATGATGGACATGCAAGAACCTGACATAGTTCGGACACTGAAGCTTGACAGTGGAGTTAGGATTCAAGTTTTTGAGGGAGATGGAGCAGAAGCACATGAAGGAGACATGGTGGAGTTCAATTATGTCTGCAGGCGTTCAAATGGATATTTTGTTCACAGCACTGTTGATCAATTCAGTGGAGAAAGCACACCGGTAATCCTGCCTTTGAAAGAAAATCAGATAATAGAGGGCTTAAAGGAGGTGCTGGTTGGCATGAGAGTTGGAGGAAAAAGAAGAGCACTTATCCCTCCCTCTGTTGGTTACATAAATGAAAATTTGAACCCGATTCCTGAAGAGTTTGGTCCTCGACGTAGTCTGTTATCACATCGGAATGAGCCCTTGATATTTGAGGTGCAACTTTTGAAAGTACTTTGAGTTTCATTTTCTCTCTGTATTGCTTTCGATTTCTATTCACCTCTGTCCATTCTGTTGAATTAAATCATTGTATATTTAATATTTGATAGCATCTATTTATCAGTCTTGTTATGCTCCAACACAAACAAGATTGGGTAAGATGACTGTCTTTCTTCTTTTTTTGGACCCTTTGTCACAAGATAAATATTCGATCTTAGAATTATAGGATAGAAAATAATATTATTGTTGTTGTAGAG

Coding sequence (CDS)

ATGGATGAGGATGTATCCATATCCAAGCATCCCATGGTCAATCATTTGGACGTCAGGAACGCATCATTTTCTGTCAAAAGATTTCCAAGAAGGTTGTTCTCACAGTTCATTGGTTTGTATCCAATCTTGTTATATGCATATCCTAGTTTCAGCGCCCCAATGATGGACATGCAAGAACCTGACATAGTTCGGACACTGAAGCTTGACAGTGGAGTTAGGATTCAAGTTTTTGAGGGAGATGGAGCAGAAGCACATGAAGGAGACATGGTGGAGTTCAATTATGTCTGCAGGCGTTCAAATGGATATTTTGTTCACAGCACTGTTGATCAATTCAGTGGAGAAAGCACACCGGTAATCCTGCCTTTGAAAGAAAATCAGATAATAGAGGGCTTAAAGGAGGTGCTGGTTGGCATGAGAGTTGGAGGAAAAAGAAGAGCACTTATCCCTCCCTCTGTTGGTTACATAAATGAAAATTTGAACCCGATTCCTGAAGAGTTTGGTCCTCGACGTAGTCTGTTATCACATCGGAATGAGCCCTTGATATTTGAGGTGCAACTTTTGAAAGTACTTTGA

Protein sequence

MDEDVSISKHPMVNHLDVRNASFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEPDIVRTLKLDSGVRIQVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVILPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFEVQLLKVL*

Homology

[Close]

BLAST of Cucsa.240710 vs. Swiss-Prot
Match: FK161_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-1 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.2e-65
Identity = 123/172 (71.51%), Postives = 142/172 (82.56%), Query Frame = 1


Query: 21  ASFSVKRFPRRLFSQFIGLYPIL-LYAYPSFSAPMMDMQEPDIVRTLKLDSGVRIQEVFE 80
           +S S    PRR+F Q  G   +L L  +PS +AP+  M+EP+++RTLKL SGVR QE+ E
Sbjct: 36  SSVSAVHVPRRMFMQLSGFGSVLTLLDFPSLAAPVPQMKEPEVIRTLKLPSGVRYQEIIE 95

Query: 81  GDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVILPLKENQIIEGLKEVLVGM 140
           G+G EAHEGD+VE NYVCRR+NGYFVHSTVDQFSGES+PV L L EN +IEGLKEVLVGM
Sbjct: 96  GEGREAHEGDLVELNYVCRRANGYFVHSTVDQFSGESSPVKLILDENDVIEGLKEVLVGM 155

Query: 141 RVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFEVQLLKVL 192
           + GGKRRALIPPSVGYINE L PIPEEFGPRRSLLSH NEPL+FE+QLLKVL
Sbjct: 156 KAGGKRRALIPPSVGYINETLKPIPEEFGPRRSLLSHANEPLVFEIQLLKVL 207

[Close]

BLAST of Cucsa.240710 vs. Swiss-Prot
Match: FK171_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic OS=Arabidopsis thaliana GN=FKBP17-1 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.5e-10
Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = 1


Query: 71  GVRIQEVFEGDGAEAHEGDMVEFNYVCRRS--NGYFVHSTVDQ--FSGESTPVILPLKEN 130
           GV+  ++  GDG    EGD +E +Y  R +   G+   ST D    +GE+ P    L  +
Sbjct: 88  GVKALDLRIGDGDVPIEGDQIEIHYYGRLAAKQGWRFDSTYDHKDSNGEAVPFTFVLGSS 147

Query: 131 QIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLS 176
           ++I G++  +  M+VGG RR +IPPS GY N +  P+P  F  R+ L +
Sbjct: 148 KVIPGIETAVRSMKVGGIRRVVIPPSQGYQNTSQEPLPPNFFDRQRLFT 196

[Close]

BLAST of Cucsa.240710 vs. Swiss-Prot
Match: FKBP4_USTMA (FK506-binding protein 4 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=FPR4 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.1e-08
Identity = 40/126 (31.75%), Postives = 60/126 (47.62%), Query Frame = 1


Query: 65  TLKLDSGVRIQEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVILPLK 124
           T KL SG+ I+E   G G     G  V   YV + +NG       DQ +    P    L 
Sbjct: 266 TTKLPSGLVIEEKSAGSGPPCKAGQKVGMRYVGKLTNG----KVFDQCTS-GKPFYFKLG 325

Query: 125 ENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFE 184
           + ++I+G  E + GMRVG +RR   PP + Y N+ +  IP             N  L+F+
Sbjct: 326 KGEVIKGWDEGVKGMRVGAERRLTCPPKLAYGNQKIPGIP------------ANSTLVFD 374

Query: 185 VQLLKV 191
           V+L+++
Sbjct: 386 VKLVEI 374

[Close]

BLAST of Cucsa.240710 vs. Swiss-Prot
Match: FKBP4_SCHPO (FK506-binding protein 39 kDa OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fkbp39 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.1e-08
Identity = 39/131 (29.77%), Postives = 61/131 (46.56%), Query Frame = 1


Query: 60  PDIVRTLKLDSGVRIQEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPV 119
           P   +T  L  GV + +V  G GA A  G  VE  Y+ +  NG      V   + +  P 
Sbjct: 247 PSSPKTRTLKGGVVVTDVKTGSGASATNGKKVEMRYIGKLENG-----KVFDKNTKGKPF 306

Query: 120 ILPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNE 179
              L   ++I G    + GM+ GG+R+  IP  + Y N+++  IP            +N 
Sbjct: 307 AFILGRGEVIRGWDVGVAGMQEGGERKITIPAPMAYGNQSIPGIP------------KNS 360

Query: 180 PLIFEVQLLKV 191
            L+FEV+L++V
Sbjct: 367 TLVFEVKLVRV 360

[Close]

BLAST of Cucsa.240710 vs. Swiss-Prot
Match: FKBP4_CHATD (FK506-binding protein 4 OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) GN=FPR4 PE=3 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 2.0e-07
Identity = 37/135 (27.41%), Postives = 68/135 (50.37%), Query Frame = 1


Query: 56  DMQEPDIVRTLKLDSGVRIQEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGE 115
           D+++P +   +K+  GV I +   G G     GD V   Y+ + +NG      V   + +
Sbjct: 367 DLKKPSL--GVKVVQGVTIDDRKLGTGRTVKSGDRVSLRYIGKLTNG-----KVFDANKK 426

Query: 116 STPVILPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLS 175
             P  + + + ++I+G +  L+GM+VGG+RR  IPP + Y +  +  IP           
Sbjct: 427 GAPFTVRVGKGEVIKGWEIGLIGMQVGGERRLTIPPHLAYGSRAMPGIP----------- 482

Query: 176 HRNEPLIFEVQLLKV 191
             N  L+F+++LL++
Sbjct: 487 -ANSTLVFDIKLLEI 482

[Close]

BLAST of Cucsa.240710 vs. TrEMBL
Match: A0A0A0K4G4_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_7G276690 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 8.0e-104
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1


Query: 1   MDEDVSISKHPMVNHLDVRNASFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEP 60
           MDEDVSISKHPMVNHLDVRNASFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEP
Sbjct: 1   MDEDVSISKHPMVNHLDVRNASFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEP 60

Query: 61  DIVRTLKLDSGVRIQEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVI 120
           DIVRTLKLDSGVRIQEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVI
Sbjct: 61  DIVRTLKLDSGVRIQEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVI 120

Query: 121 LPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEP 180
           LPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEP
Sbjct: 121 LPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEP 180

Query: 181 LIFEVQLLKVL 192
           LIFEVQLLKVL
Sbjct: 181 LIFEVQLLKVL 191

[Close]

BLAST of Cucsa.240710 vs. TrEMBL
Match: A0A067JIC7_JATCU (Peptidyl-prolyl cis-trans isomerase OS=Jatropha curcas GN=JCGZ_23470 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 8.9e-71
Identity = 134/170 (78.82%), Postives = 151/170 (88.82%), Query Frame = 1


Query: 22  SFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEPDIVRTLKLDSGVRIQEVFEGD 81
           S SVKRFPRR+  + IG   ILL   P F+AP+ DM+EP +VRTLKLDSGVRIQE+ EG+
Sbjct: 37  SLSVKRFPRRVLLKSIGFNSILLRVSPVFAAPVPDMKEPQVVRTLKLDSGVRIQEIIEGE 96

Query: 82  GAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVILPLKENQIIEGLKEVLVGMRV 141
           G+EAHEGD+VE NYVCRRSNGYFVHSTVDQFSGES+PVILPL EN+II+GLK+VL+GM++
Sbjct: 97  GSEAHEGDVVEINYVCRRSNGYFVHSTVDQFSGESSPVILPLDENRIIKGLKDVLIGMKI 156

Query: 142 GGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFEVQLLKVL 192
           GGKRRALIPPSVGYINE L PIPEEFGPRRSLLSH NEPLIFEVQLLKVL
Sbjct: 157 GGKRRALIPPSVGYINETLKPIPEEFGPRRSLLSHANEPLIFEVQLLKVL 206

[Close]

BLAST of Cucsa.240710 vs. TrEMBL
Match: V4UIG0_9ROSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10009425mg PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.2e-69
Identity = 133/177 (75.14%), Postives = 151/177 (85.31%), Query Frame = 1


Query: 15  HLDVRNASFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEPDIVRTLKLDSGVRI 74
           +L  + +S +VKR PRR   QFIG   ++L+  P F APM DM+EP+ +RTLKL SGVRI
Sbjct: 44  NLFAKFSSLTVKRLPRRTLLQFIGFSSMVLHVNPDFDAPMPDMKEPEAIRTLKLASGVRI 103

Query: 75  QEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVILPLKENQIIEGLKE 134
           QE+ EG+G EA EGD+V+ NYVCRRSNGYFVHSTVDQFSGES PVILPL EN+II+GLKE
Sbjct: 104 QEIIEGEGPEASEGDIVQLNYVCRRSNGYFVHSTVDQFSGESAPVILPLDENKIIKGLKE 163

Query: 135 VLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFEVQLLKVL 192
           VLVGM+VGGKRRALIPPSVGYINENL PIP+EFGPRRSLLSH NEPLIFEVQLLKVL
Sbjct: 164 VLVGMKVGGKRRALIPPSVGYINENLKPIPDEFGPRRSLLSHANEPLIFEVQLLKVL 220

[Close]

BLAST of Cucsa.240710 vs. TrEMBL
Match: V4TZB3_9ROSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10009425mg PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.2e-69
Identity = 133/177 (75.14%), Postives = 151/177 (85.31%), Query Frame = 1


Query: 15  HLDVRNASFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEPDIVRTLKLDSGVRI 74
           +L  + +S +VKR PRR   QFIG   ++L+  P F APM DM+EP+ +RTLKL SGVRI
Sbjct: 45  NLFAKFSSLTVKRLPRRTLLQFIGFSSMVLHVNPDFDAPMPDMKEPEAIRTLKLASGVRI 104

Query: 75  QEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVILPLKENQIIEGLKE 134
           QE+ EG+G EA EGD+V+ NYVCRRSNGYFVHSTVDQFSGES PVILPL EN+II+GLKE
Sbjct: 105 QEIIEGEGPEASEGDIVQLNYVCRRSNGYFVHSTVDQFSGESAPVILPLDENKIIKGLKE 164

Query: 135 VLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFEVQLLKVL 192
           VLVGM+VGGKRRALIPPSVGYINENL PIP+EFGPRRSLLSH NEPLIFEVQLLKVL
Sbjct: 165 VLVGMKVGGKRRALIPPSVGYINENLKPIPDEFGPRRSLLSHANEPLIFEVQLLKVL 221

[Close]

BLAST of Cucsa.240710 vs. TrEMBL
Match: A0A067EZF5_CITSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis GN=CISIN_1g028432mg PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.2e-69
Identity = 133/177 (75.14%), Postives = 151/177 (85.31%), Query Frame = 1


Query: 15  HLDVRNASFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEPDIVRTLKLDSGVRI 74
           +L  + +S +VKR PRR   QFIG   ++L+  P F APM DM+EP+ +RTLKL SGVRI
Sbjct: 33  NLFAKFSSLTVKRLPRRTLLQFIGFSSMVLHVNPDFDAPMPDMKEPEAIRTLKLASGVRI 92

Query: 75  QEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVILPLKENQIIEGLKE 134
           QE+ EG+G EA EGD+V+ NYVCRRSNGYFVHSTVDQFSGES PVILPL EN+II+GLKE
Sbjct: 93  QEIIEGEGPEASEGDIVQLNYVCRRSNGYFVHSTVDQFSGESAPVILPLDENKIIKGLKE 152

Query: 135 VLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFEVQLLKVL 192
           VLVGM+VGGKRRALIPPSVGYINENL PIP+EFGPRRSLLSH NEPLIFEVQLLKVL
Sbjct: 153 VLVGMKVGGKRRALIPPSVGYINENLKPIPDEFGPRRSLLSHANEPLIFEVQLLKVL 209

[Close]

BLAST of Cucsa.240710 vs. TAIR10
Match: AT4G26555.1 (AT4G26555.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 250.8 bits (639), Expect = 7.0e-67
Identity = 123/172 (71.51%), Postives = 142/172 (82.56%), Query Frame = 1


Query: 21  ASFSVKRFPRRLFSQFIGLYPIL-LYAYPSFSAPMMDMQEPDIVRTLKLDSGVRIQEVFE 80
           +S S    PRR+F Q  G   +L L  +PS +AP+  M+EP+++RTLKL SGVR QE+ E
Sbjct: 36  SSVSAVHVPRRMFMQLSGFGSVLTLLDFPSLAAPVPQMKEPEVIRTLKLPSGVRYQEIIE 95

Query: 81  GDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVILPLKENQIIEGLKEVLVGM 140
           G+G EAHEGD+VE NYVCRR+NGYFVHSTVDQFSGES+PV L L EN +IEGLKEVLVGM
Sbjct: 96  GEGREAHEGDLVELNYVCRRANGYFVHSTVDQFSGESSPVKLILDENDVIEGLKEVLVGM 155

Query: 141 RVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFEVQLLKVL 192
           + GGKRRALIPPSVGYINE L PIPEEFGPRRSLLSH NEPL+FE+QLLKVL
Sbjct: 156 KAGGKRRALIPPSVGYINETLKPIPEEFGPRRSLLSHANEPLVFEIQLLKVL 207

[Close]

BLAST of Cucsa.240710 vs. TAIR10
Match: AT4G19830.1 (AT4G19830.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-11
Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = 1


Query: 71  GVRIQEVFEGDGAEAHEGDMVEFNYVCRRS--NGYFVHSTVDQ--FSGESTPVILPLKEN 130
           GV+  ++  GDG    EGD +E +Y  R +   G+   ST D    +GE+ P    L  +
Sbjct: 88  GVKALDLRIGDGDVPIEGDQIEIHYYGRLAAKQGWRFDSTYDHKDSNGEAVPFTFVLGSS 147

Query: 131 QIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLS 176
           ++I G++  +  M+VGG RR +IPPS GY N +  P+P  F  R+ L +
Sbjct: 148 KVIPGIETAVRSMKVGGIRRVVIPPSQGYQNTSQEPLPPNFFDRQRLFT 196

[Close]

BLAST of Cucsa.240710 vs. TAIR10
Match: AT5G13410.1 (AT5G13410.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 53.1 bits (126), Expect = 2.1e-07
Identity = 45/156 (28.85%), Postives = 75/156 (48.08%), Query Frame = 1


Query: 57  MQEPDIVRTLKLDSGVRIQEVFEGDGAEAHEGDMVEFNYVCRRSNGYFV----------- 116
           M+ PD   T    SG++ +++  G G  A +GD V  ++     +GY +           
Sbjct: 107 MKYPDYTET---QSGLQYKDLRVGTGPIAKKGDKVVVDW-----DGYTIGYYGRIFEARN 166

Query: 117 HSTVDQFSGESTPVI-LPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLN--- 176
            +    F G+        L  N++I   +E + GM +GG RR ++PP +GY + + N   
Sbjct: 167 KTKGGSFEGDDKEFFKFTLGSNEVIPAFEEAVSGMALGGIRRIIVPPELGYPDNDYNKSG 226

Query: 177 PIPEEFGPRRSL-LSHRNEPLI-----FEVQLLKVL 192
           P P  F  +R+L    RN+ LI     F+V+LLK++
Sbjct: 227 PRPMTFSGQRALDFVLRNQGLIDKTLLFDVELLKIV 254

[Close]

BLAST of Cucsa.240710 vs. TAIR10
Match: AT3G10060.1 (AT3G10060.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 52.4 bits (124), Expect = 3.7e-07
Identity = 30/100 (30.00%), Postives = 54/100 (54.00%), Query Frame = 1


Query: 68  LDSGVRIQEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVILPLKENQ 127
           L +G++  ++  G+GAEA +G  V  +YV +     F+ S      G  TP    + +++
Sbjct: 103 LPNGLKYYDIKVGNGAEAVKGSRVAVHYVAKWKGITFMTSRQGLGVGGGTPYGFDVGQSE 162

Query: 128 ---IIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIP 165
              +++GL   + GMRVGG+R  ++PP + Y  + +  IP
Sbjct: 163 RGNVLKGLDLGVEGMRVGGQRLVIVPPELAYGKKGVQEIP 202

[Close]

BLAST of Cucsa.240710 vs. TAIR10
Match: AT3G12340.1 (AT3G12340.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06
Identity = 41/130 (31.54%), Postives = 65/130 (50.00%), Query Frame = 1


Query: 63  VRTLKLDSGVRIQEVFEG--DGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVI 122
           + T  L +GV I+++ +G  DG  A +G  V   Y  +  +     +  D   GE  P+ 
Sbjct: 384 LETRTLSNGVIIEDIEKGKLDGKSAVKGKKVSILYTGKLKD---TGNLFDSNLGED-PLR 443

Query: 123 LPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEP 182
             L    +IEGL   + GMRVG KRR +IPP++GY    L    +E  P+ +        
Sbjct: 444 FRLGGENVIEGLSIGVEGMRVGDKRRLIIPPALGYSKRGL----KEKVPKSAW------- 498

Query: 183 LIFEVQLLKV 191
           L++EV+ +K+
Sbjct: 504 LVYEVEAVKI 498

[Close]

BLAST of Cucsa.240710 vs. NCBI nr
Match: gi|778726286|ref|XP_011659081.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 1.2e-103
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1


Query: 1   MDEDVSISKHPMVNHLDVRNASFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEP 60
           MDEDVSISKHPMVNHLDVRNASFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEP
Sbjct: 24  MDEDVSISKHPMVNHLDVRNASFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEP 83

Query: 61  DIVRTLKLDSGVRIQEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVI 120
           DIVRTLKLDSGVRIQEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVI
Sbjct: 84  DIVRTLKLDSGVRIQEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVI 143

Query: 121 LPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEP 180
           LPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEP
Sbjct: 144 LPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEP 203

Query: 181 LIFEVQLLKVL 192
           LIFEVQLLKVL
Sbjct: 204 LIFEVQLLKVL 214

[Close]

BLAST of Cucsa.240710 vs. NCBI nr
Match: gi|778726290|ref|XP_011659082.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 1.2e-103
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1


Query: 1   MDEDVSISKHPMVNHLDVRNASFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEP 60
           MDEDVSISKHPMVNHLDVRNASFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEP
Sbjct: 1   MDEDVSISKHPMVNHLDVRNASFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEP 60

Query: 61  DIVRTLKLDSGVRIQEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVI 120
           DIVRTLKLDSGVRIQEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVI
Sbjct: 61  DIVRTLKLDSGVRIQEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVI 120

Query: 121 LPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEP 180
           LPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEP
Sbjct: 121 LPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEP 180

Query: 181 LIFEVQLLKVL 192
           LIFEVQLLKVL
Sbjct: 181 LIFEVQLLKVL 191

[Close]

BLAST of Cucsa.240710 vs. NCBI nr
Match: gi|643708721|gb|KDP23637.1| (hypothetical protein JCGZ_23470 [Jatropha curcas])

HSP 1 Score: 274.6 bits (701), Expect = 1.3e-70
Identity = 134/170 (78.82%), Postives = 151/170 (88.82%), Query Frame = 1


Query: 22  SFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEPDIVRTLKLDSGVRIQEVFEGD 81
           S SVKRFPRR+  + IG   ILL   P F+AP+ DM+EP +VRTLKLDSGVRIQE+ EG+
Sbjct: 37  SLSVKRFPRRVLLKSIGFNSILLRVSPVFAAPVPDMKEPQVVRTLKLDSGVRIQEIIEGE 96

Query: 82  GAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVILPLKENQIIEGLKEVLVGMRV 141
           G+EAHEGD+VE NYVCRRSNGYFVHSTVDQFSGES+PVILPL EN+II+GLK+VL+GM++
Sbjct: 97  GSEAHEGDVVEINYVCRRSNGYFVHSTVDQFSGESSPVILPLDENRIIKGLKDVLIGMKI 156

Query: 142 GGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFEVQLLKVL 192
           GGKRRALIPPSVGYINE L PIPEEFGPRRSLLSH NEPLIFEVQLLKVL
Sbjct: 157 GGKRRALIPPSVGYINETLKPIPEEFGPRRSLLSHANEPLIFEVQLLKVL 206

[Close]

BLAST of Cucsa.240710 vs. NCBI nr
Match: gi|567921324|ref|XP_006452668.1| (hypothetical protein CICLE_v10009425mg [Citrus clementina])

HSP 1 Score: 270.0 bits (689), Expect = 3.2e-69
Identity = 133/177 (75.14%), Postives = 151/177 (85.31%), Query Frame = 1


Query: 15  HLDVRNASFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEPDIVRTLKLDSGVRI 74
           +L  + +S +VKR PRR   QFIG   ++L+  P F APM DM+EP+ +RTLKL SGVRI
Sbjct: 45  NLFAKFSSLTVKRLPRRTLLQFIGFSSMVLHVNPDFDAPMPDMKEPEAIRTLKLASGVRI 104

Query: 75  QEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVILPLKENQIIEGLKE 134
           QE+ EG+G EA EGD+V+ NYVCRRSNGYFVHSTVDQFSGES PVILPL EN+II+GLKE
Sbjct: 105 QEIIEGEGPEASEGDIVQLNYVCRRSNGYFVHSTVDQFSGESAPVILPLDENKIIKGLKE 164

Query: 135 VLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFEVQLLKVL 192
           VLVGM+VGGKRRALIPPSVGYINENL PIP+EFGPRRSLLSH NEPLIFEVQLLKVL
Sbjct: 165 VLVGMKVGGKRRALIPPSVGYINENLKPIPDEFGPRRSLLSHANEPLIFEVQLLKVL 221

[Close]

BLAST of Cucsa.240710 vs. NCBI nr
Match: gi|641840293|gb|KDO59215.1| (hypothetical protein CISIN_1g028432mg [Citrus sinensis])

HSP 1 Score: 270.0 bits (689), Expect = 3.2e-69
Identity = 133/177 (75.14%), Postives = 151/177 (85.31%), Query Frame = 1


Query: 15  HLDVRNASFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEPDIVRTLKLDSGVRI 74
           +L  + +S +VKR PRR   QFIG   ++L+  P F APM DM+EP+ +RTLKL SGVRI
Sbjct: 33  NLFAKFSSLTVKRLPRRTLLQFIGFSSMVLHVNPDFDAPMPDMKEPEAIRTLKLASGVRI 92

Query: 75  QEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVILPLKENQIIEGLKE 134
           QE+ EG+G EA EGD+V+ NYVCRRSNGYFVHSTVDQFSGES PVILPL EN+II+GLKE
Sbjct: 93  QEIIEGEGPEASEGDIVQLNYVCRRSNGYFVHSTVDQFSGESAPVILPLDENKIIKGLKE 152

Query: 135 VLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFEVQLLKVL 192
           VLVGM+VGGKRRALIPPSVGYINENL PIP+EFGPRRSLLSH NEPLIFEVQLLKVL
Sbjct: 153 VLVGMKVGGKRRALIPPSVGYINENLKPIPDEFGPRRSLLSHANEPLIFEVQLLKVL 209

The following BLAST results are available for this feature:

BLAST of Cucsa.240710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FK161_ARATH	1.2e-65	71.51	Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic OS=Arabidopsis thali...	[more]
FK171_ARATH	2.5e-10	35.78	Peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic OS=Arabidopsis thali...	[more]
FKBP4_USTMA	4.1e-08	31.75	FK506-binding protein 4 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=FPR4 PE=3...	[more]
FKBP4_SCHPO	9.1e-08	29.77	FK506-binding protein 39 kDa OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
FKBP4_CHATD	2.0e-07	27.41	FK506-binding protein 4 OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50...	[more]

BLAST of Cucsa.240710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4G4_CUCSA	8.0e-104	100.00	Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_7G276690 PE=4 SV=1	[more]
A0A067JIC7_JATCU	8.9e-71	78.82	Peptidyl-prolyl cis-trans isomerase OS=Jatropha curcas GN=JCGZ_23470 PE=4 SV=1	[more]
V4UIG0_9ROSI	2.2e-69	75.14	Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10009425mg PE...	[more]
V4TZB3_9ROSI	2.2e-69	75.14	Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10009425mg PE...	[more]
A0A067EZF5_CITSI	2.2e-69	75.14	Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis GN=CISIN_1g028432mg PE=4 ...	[more]

BLAST of Cucsa.240710 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G26555.1	7.0e-67	71.51	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT4G19830.1	1.4e-11	35.78	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT5G13410.1	2.1e-07	28.85	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT3G10060.1	3.7e-07	30.00	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT3G12340.1	1.1e-06	31.54	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]

BLAST of Cucsa.240710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778726286\|ref\|XP_011659081.1\|	1.2e-103	100.00	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic isoform X...	[more]
gi\|778726290\|ref\|XP_011659082.1\|	1.2e-103	100.00	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic isoform X...	[more]
gi\|643708721\|gb\|KDP23637.1\|	1.3e-70	78.82	hypothetical protein JCGZ_23470 [Jatropha curcas]	[more]
gi\|567921324\|ref\|XP_006452668.1\|	3.2e-69	75.14	hypothetical protein CICLE_v10009425mg [Citrus clementina]	[more]
gi\|641840293\|gb\|KDO59215.1\|	3.2e-69	75.14	hypothetical protein CISIN_1g028432mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001179	PPIase_FKBP_dom
IPR023566	PPIase_FKBP
IPR001179	PPIase_FKBP_dom
IPR023566	PPIase_FKBP

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding
GO:0006457	protein folding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.240710.2	Cucsa.240710.2	mRNA
Cucsa.240710.1	Cucsa.240710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00254	FKBP_C	coord: 83..187 score: 2.3
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PROFILE	PS50059	FKBP_PPIASE	coord: 87..190 score: 14
IPR023566	Peptidyl-prolyl cis-trans isomerase, FKBP-type	PANTHER	PTHR10516	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 30..190 score: 2.3
None	No IPR available	GENE3D	G3DSA:3.10.50.40		coord: 66..189 score: 4.4
None	No IPR available	PANTHER	PTHR10516:SF250	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-1, CHLOROPLASTIC	coord: 30..190 score: 2.3
None	No IPR available	unknown	SSF54534	FKBP-like	coord: 63..189 score: 1.91

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.240710	Cla003333	Watermelon (97103) v1	cgywmB455
Cucsa.240710	Csa7G276690	Cucumber (Chinese Long) v2	cgycuB348
Cucsa.240710	ClCG09G021550	Watermelon (Charleston Gray)	cgywcgB425
Cucsa.240710	CSPI07G11900	Wild cucumber (PI 183967)	cgycpiB364
Cucsa.240710	CmaCh09G010300	Cucurbita maxima (Rimu)	cgycmaB0671
Cucsa.240710	CmoCh09G010320	Cucurbita moschata (Rifu)	cgycmoB0671
Cucsa.240710	Lsi02G018070	Bottle gourd (USVL1VR-Ls)	cgylsiB400
Cucsa.240710	Cp4.1LG06g08290	Cucurbita pepo (Zucchini)	cgycpeB0648
Cucsa.240710	MELO3C028909.2	Melon (DHL92) v3.6.1	cgymedB405
Cucsa.240710	CsaV3_7G023830	Cucumber (Chinese Long) v3	cgycucB367
Cucsa.240710	Cla97C09G182960	Watermelon (97103) v2	cgywmbB432
Cucsa.240710	Bhi09G001510	Wax gourd	cgywgoB492
Cucsa.240710	Carg24741	Silver-seed gourd	carcgyB0498

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.240710	Bottle gourd (USVL1VR-Ls)	cgylsiB399
Cucsa.240710	Melon (DHL92) v3.6.1	cgymedB407
Cucsa.240710	Watermelon (97103) v2	cgywmbB433
Cucsa.240710	Wax gourd	cgywgoB491
Cucsa.240710	Cucurbita maxima (Rimu)	cgycmaB0670
Cucsa.240710	Cucurbita moschata (Rifu)	cgycmoB0670
Cucsa.240710	Melon (DHL92) v3.5.1	cgymeB410
Cucsa.240710	Watermelon (Charleston Gray)	cgywcgB424
Cucsa.240710	Watermelon (97103) v1	cgywmB452
Cucsa.240710	Watermelon (97103) v1	cgywmB454