Cucsa.240710.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTTCTCTCGCTCTCCTTCCGTCCTCAATTTTTCTGGGTTTGTATTGTACTCTTCTTAGAATTCTCTTCTCCTTTGTATTATTCATCGAGATAAAACGATACATTTCTTTGTTGGCGTAACCACATCATTTTTAGCCTTAGAATGCATGGAATGCCCTTCCCGGCTTTTCCATATTCTCCATTTCTGCATTCTTTAATTGCCTACGTGGTATGGAATGGGGATCTTTGACTACCGAGATTTTAAGGCACACGGAGAACATGAATAAGAACATTTCTAATTTTACTTTTGGGTTGAACGCGAATTAATACTGATTTCTTATAGCTTAAGCTGCTGGGAGTTGCAAAATTGTTATGTAGATATGCATCCAGAAGTGTCTACTTTTATGGATTTTCTTTATTGAGTTCTTGCCTTTTAGCGCGCCAGTCTGTGGAATCTGCTTGCCCGTTTAATTTTCGGAATGCCATTTCACCAGATGGCTCGTGATTTTTGCTTAGTGTCTCTCTGGCCGATTGACTTAACGGTTTTTATCCTTCGTCCTTTGAATGCTTAATGCCAAAGGTTGAAGGACAAGGAACTATATCATATGAGTTAGTGGTATTTTGCTCTCTTTTTTGCTAGCTTCTCGACTTTTATGGACTTTCAATTTTTTTAATTTGGTTCATTTATCGATTAAATTTTTGTATCATCTAGTATAAAAAATACGGTTCATTTATGATATATCATTTTTAAATAATTTTTTTAATATGATTCATTTATGATATATCATTTCTATATCATTTTAGTGGTAAACAAGACAAAATCATAAAGTAGTGGCACTCCTGTTAAGGATATCAACAGTGGGCGTTGTGCTTATAAATAGAGGTGTTTAGAGTTGAGGATTAGGCAAAACTTTTGGAATCAGTTGTCTCCTGATAGAGAGATAATCCTCTCCATAGTCTATTGTCATTGTATGATGTTGCAATATAGACTTATTGTATCCTATCATATTAATAACAAACCAAAACAACAAATTGTAAACTTCTCAGTTTCCCAGAAAGGGAAATATCTTTTGTGAAATTTCCTGACTAAAAACATAAGTCACGAAGTCTCACAACTTCTTTCAGGCTGGATGGGTGTTTAATGTTTCAAATTGTTCTTTTAACACAATTATTTCGAACCTCAAGTCTGAGACTAGATACCTTTATCAGAAGATACTCACTTCTTGACAGCTTATCAATGCCTGCTATTGTAGTTTCCACAAAACCATTGGCATGGATGAGGATGTATCCATATCCAAGCATCCCATGGTCAATCATTTGGACGTCAGGAACGCATCATTTTCTGTCAAAAGATTTCCAAGAAGGTTGTTCTCACAGTTCATTGGTTTGTATCCAATCTTGTTATATGCATATCCTAGTTTCAGCGCCCCAATGATGGACATGCAAGAACCTGACATAGTTCGGTATGTATTTCATTTGTAATTTTCTCTTGAAATGTTTCTATCATTCTCATAACCTCACAGCGGAGGGGGCTTTCATGACCATTCATCAAAAGTTCTTCACATGTTCATTTGGAATTGTTGTTTAAATTTTGAAGCTTTCAGGACACTGAAGCTTGACAGTGGAGTTAGGATTCAAGGTAGAATTTCTTGATCCCCACCTAGTATCAGGCTTCTTTCTTTTTTCACTTTTTCTTGGGTTAAAAAATAAACTTATTTACTTTTTTTTGTACTGTTCGCTTTTAAAACCAGTCTTGAAAACTCAAGGTTTTATAAAACTTTTAAAAGGCCGTCACCAGCAAAAATATTGGTCTATTATAAATGTTATCAAACAAGATCTTAATTTCTCTTTGTGATATCATTTTGAAAAGAAGGTTTCCTGTTAATGTTAGCAGTGAGAGCACATTTGGTAAAAATGCAGCAGGCTAGCTTTATTACATTATAAACATGTACTAGCTTCAGTTCCTTCTTCATACTAATTGGGATGAAACTATGGTCTCCTTGATAGCCATTTGGTTTTTGAAAATTAAGCCTATTTTCTCTTAATTTCTTGTAATGGTTTCGTCTTTTTAAGTAAAAGAGTTGAATTCTTTGTTAAATTAAAAAATATATATTTTTGAAGAACTCCTTTTTTTAATTTTCAAAACTTGGTTTTGTTTTTAAAAATCTGGGTAGAAAGAAGATGGTAAAACAAGAAATTTAAAGGTGGAAGTGGTGTTTATAGGCTTAATTTTCAAAAAACAAAAAAACAAAAAACCAATGGTTACCTAATGATGCCTACATTATTTTGTTATTCTGTGTTCTATGACTCTTCTATATAATTCTTGAATATGAAAACAAATGAGGTATGTGATTGTTCACTGTAATAATAACATTCTTAGTACCAATTGATAGAAGTTTTTGAGGGAGATGGAGCAGAAGCACATGAAGGAGACATGGTGGAGTTCAATTATGTCTGCAGGCGTTCAAATGGATATTTTGTTCACAGGTAAATGTATTTCTCTTGCATACAACAGCCAACTGTGCAAATTTGTTGGTGCCTTTATAGCCAATTTATCATTATATTTTCAGTCTTTCCCAATGCTTCTGTTGTCATATTCACAGCACTGTTGATCAATTCAGTGGAGAAAGCACACCGGTAATCCTGCCTTTGAAAGAAAATCAGGTAGTCGCTTCTTTTATATAAGTTTGAATGGATATAATGCCTAATGGCCGTATAGTTGTGCTTGCTGTTCATTTTAATTGTTTGAAAATTCTTGACGTTGCATCAACGTAGACTACTCGCATTGCAATATTATTGATAATCATTGACTGGAGGTTAGTTCATGGGCTTAAAAAGTAGCCTAAGATTGGAAAGTTTGGATATAATTATCATGAAGTGTAACTAACAATGTCAAAATCTTGGGTTTATACAGCCCATCACAAGAACTTGATTATATTTGGCAAATGCTCTGTTAGTTCGATCATATTTTTTTTCCTCCTTTAGATGCCAAAGCTCCTATATCGCCACTTATGCTAGCTGCAGCGAATAAATATTCGTAGTTTGCTTGGTCTGCTTTCAAGTTTTATGTCATTCAATAGTGGATATGCACATCATTCTTGTTAGAAAAAATCACCACATTTTTTGTGTTTTTCACTGATATTTTATTTCTTAAAGATAATAGAGGGCTTAAAGGAGGTGCTGGTTGGCATGAGAGTTGGAGGTATTTATGGATATTTTATCATCAAGTTTTGCTTTTAATGATTGGTTCGTTAAATAACATAAAAGTATGTTTAAATATTTTTTGTTTGCTCTATTTGTTCTTCATATCGTTTCAACATTGCCTCTCACTGTTCGTGGCTTGTATTCTTTATTATGCCTTTTATCATTTCCAAACCTTCCTCAACTTCATTGCATTAGCCTTGTATACGAGGTTTCTATTGGCTCACCCTCTTCCTTTTATATTCCCAACTTGTTCTAAATGTATTTTTCAAGTTTTTTAATAGTTAGAAAGTAAATTAGGAAACTAGAAGATTCCCGATGGGTGGAAAAACAGTTTTTAAACCCCTTCTTCATAATTGATGCAGGATTAGTTTACAAAAATATTAGGAATACTCGTAAATGTAGCAATTATATTCAAAATAATTAAGTATATAGCAACGTTTTAAAAAAGTTTGCTAATATAACAAAATTTGTCCAAGTCTATCAAGGATAGAAGTGTATCACTGATAAACTGTATTGCAAATATTGGTCTACTAGTGATAGACCATAAAAGTATTAGTGATAGAAGTCTATCACCGATAGATTTTGCTATATTTGCAATTTTTTTAAAAAATGTTGCTTATACTTAATTATTATTCCTAAAATTGTTACCAATTATAATTTTGCTAAATGTTATTAGAAAATCTTTAATATTTCCGACCTCTCAACCTTTTTTAATAGACTTTTTAACTTTACAACAGTTTTCAAGCACTTATAAAGTCATTTCAAACAAATCTTCATTTGTTTCATGACTAGTAGCAAAAATAGAGGATCAGAAGCTTGATCGACAACGTTTAATTTGCACATATATTAATTGAAGATTTCTCAAAGATTCTTTTGTGAATAACAAACTTTAGTCTACGAGGAATTGCCAGTTTTCCTTTAACAGAGAAATCTGTCATTCTCTTTGTTGTTATGTTTACCAATTTCATTATTATTATTTGTTATCAGGAAAAAGAAGAGCACTTATCCCTCCCTCTGTTGGTTACATAAATGAAAATTTGAACCCGATTCCTGAAGAGGTAATGCTGATCAGTTTCTCATTAATCATTCTTTGATTAGCATAAACATTACTGATTATCCATCATAATCACTTTTTCCTTTGTCATATTTCTTAAAGTCGACAACATTAGCAGTTAATAAAATTAAGTACGTCTGGTTGCAGTTTGGTCCTCGACGTAGTCTGTTATCACATCGGAATGAGCCCTTGATATTTGAGGTGCAACTTTTGAAAGTACTTTGAGTTTCATTTTCTCTCTGTATTGCTTTCGATTTCTATTCACCTCTGTCCATTCTGTTGAATTAAATCATTGTATATTTAATATTTGATAGCATCTATTTATCAGTCTTGTTATGCTCCAACACAAACAAGATTGGGTAAGATGACTGTCTTTCTTCTTTTTTTGGACCCTTTGTCACAAGATAAATATTCGATCTTAGAATTATAGGATAGAAAATAATATTATTGTTGTTGTAGAG CCTTCTCTCGCTCTCCTTCCGTCCTCAATTTTTCTGGTTTCCACAAAACCATTGGCATGGATGAGGATGTATCCATATCCAAGCATCCCATGGTCAATCATTTGGACGTCAGGAACGCATCATTTTCTGTCAAAAGATTTCCAAGAAGGTTGTTCTCACAGTTCATTGGTTTGTATCCAATCTTGTTATATGCATATCCTAGTTTCAGCGCCCCAATGATGGACATGCAAGAACCTGACATAGTTCGGACACTGAAGCTTGACAGTGGAGTTAGGATTCAAGAAGTTTTTGAGGGAGATGGAGCAGAAGCACATGAAGGAGACATGGTGGAGTTCAATTATGTCTGCAGGCGTTCAAATGGATATTTTGTTCACAGCACTGTTGATCAATTCAGTGGAGAAAGCACACCGGTAATCCTGCCTTTGAAAGAAAATCAGATAATAGAGGGCTTAAAGGAGGTGCTGGTTGGCATGAGAGTTGGAGGAAAAAGAAGAGCACTTATCCCTCCCTCTGTTGGTTACATAAATGAAAATTTGAACCCGATTCCTGAAGAGTTTGGTCCTCGACGTAGTCTGTTATCACATCGGAATGAGCCCTTGATATTTGAGGTGCAACTTTTGAAAGTACTTTGAGTTTCATTTTCTCTCTGTATTGCTTTCGATTTCTATTCACCTCTGTCCATTCTGTTGAATTAAATCATTGTATATTTAATATTTGATAGCATCTATTTATCAGTCTTGTTATGCTCCAACACAAACAAGATTGGGTAAGATGACTGTCTTTCTTCTTTTTTTGGACCCTTTGTCACAAGATAAATATTCGATCTTAGAATTATAGGATAGAAAATAATATTATTGTTGTTGTAGAG ATGGATGAGGATGTATCCATATCCAAGCATCCCATGGTCAATCATTTGGACGTCAGGAACGCATCATTTTCTGTCAAAAGATTTCCAAGAAGGTTGTTCTCACAGTTCATTGGTTTGTATCCAATCTTGTTATATGCATATCCTAGTTTCAGCGCCCCAATGATGGACATGCAAGAACCTGACATAGTTCGGACACTGAAGCTTGACAGTGGAGTTAGGATTCAAGAAGTTTTTGAGGGAGATGGAGCAGAAGCACATGAAGGAGACATGGTGGAGTTCAATTATGTCTGCAGGCGTTCAAATGGATATTTTGTTCACAGCACTGTTGATCAATTCAGTGGAGAAAGCACACCGGTAATCCTGCCTTTGAAAGAAAATCAGATAATAGAGGGCTTAAAGGAGGTGCTGGTTGGCATGAGAGTTGGAGGAAAAAGAAGAGCACTTATCCCTCCCTCTGTTGGTTACATAAATGAAAATTTGAACCCGATTCCTGAAGAGTTTGGTCCTCGACGTAGTCTGTTATCACATCGGAATGAGCCCTTGATATTTGAGGTGCAACTTTTGAAAGTACTTTGA MDEDVSISKHPMVNHLDVRNASFSVKRFPRRLFSQFIGLYPILLYAYPSFSAPMMDMQEPDIVRTLKLDSGVRIQEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVILPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFEVQLLKVL*
BLAST of Cucsa.240710.1 vs. Swiss-Prot
Match: FK161_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-1 PE=2 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.2e-65 Identity = 123/172 (71.51%), Postives = 142/172 (82.56%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. Swiss-Prot
Match: FK171_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic OS=Arabidopsis thaliana GN=FKBP17-1 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.5e-10 Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. Swiss-Prot
Match: FKBP4_USTMA (FK506-binding protein 4 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=FPR4 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.1e-08 Identity = 40/126 (31.75%), Postives = 60/126 (47.62%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. Swiss-Prot
Match: FKBP4_SCHPO (FK506-binding protein 39 kDa OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fkbp39 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 9.1e-08 Identity = 39/131 (29.77%), Postives = 61/131 (46.56%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. Swiss-Prot
Match: FKBP4_CHATD (FK506-binding protein 4 OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) GN=FPR4 PE=3 SV=2) HSP 1 Score: 57.4 bits (137), Expect = 2.0e-07 Identity = 37/135 (27.41%), Postives = 68/135 (50.37%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. TrEMBL
Match: A0A0A0K4G4_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_7G276690 PE=4 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 8.0e-104 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. TrEMBL
Match: A0A067JIC7_JATCU (Peptidyl-prolyl cis-trans isomerase OS=Jatropha curcas GN=JCGZ_23470 PE=4 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 8.9e-71 Identity = 134/170 (78.82%), Postives = 151/170 (88.82%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. TrEMBL
Match: V4UIG0_9ROSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10009425mg PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 2.2e-69 Identity = 133/177 (75.14%), Postives = 151/177 (85.31%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. TrEMBL
Match: V4TZB3_9ROSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10009425mg PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 2.2e-69 Identity = 133/177 (75.14%), Postives = 151/177 (85.31%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. TrEMBL
Match: A0A067EZF5_CITSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis GN=CISIN_1g028432mg PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 2.2e-69 Identity = 133/177 (75.14%), Postives = 151/177 (85.31%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. TAIR10
Match: AT4G26555.1 (AT4G26555.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 250.8 bits (639), Expect = 7.0e-67 Identity = 123/172 (71.51%), Postives = 142/172 (82.56%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. TAIR10
Match: AT4G19830.1 (AT4G19830.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 67.0 bits (162), Expect = 1.4e-11 Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. TAIR10
Match: AT5G13410.1 (AT5G13410.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 53.1 bits (126), Expect = 2.1e-07 Identity = 45/156 (28.85%), Postives = 75/156 (48.08%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. TAIR10
Match: AT3G10060.1 (AT3G10060.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 52.4 bits (124), Expect = 3.7e-07 Identity = 30/100 (30.00%), Postives = 54/100 (54.00%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. TAIR10
Match: AT3G12340.1 (AT3G12340.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06 Identity = 41/130 (31.54%), Postives = 65/130 (50.00%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. NCBI nr
Match: gi|778726286|ref|XP_011659081.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 384.4 bits (986), Expect = 1.2e-103 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. NCBI nr
Match: gi|778726290|ref|XP_011659082.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 384.4 bits (986), Expect = 1.2e-103 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. NCBI nr
Match: gi|643708721|gb|KDP23637.1| (hypothetical protein JCGZ_23470 [Jatropha curcas]) HSP 1 Score: 274.6 bits (701), Expect = 1.3e-70 Identity = 134/170 (78.82%), Postives = 151/170 (88.82%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. NCBI nr
Match: gi|567921324|ref|XP_006452668.1| (hypothetical protein CICLE_v10009425mg [Citrus clementina]) HSP 1 Score: 270.0 bits (689), Expect = 3.2e-69 Identity = 133/177 (75.14%), Postives = 151/177 (85.31%), Query Frame = 1
BLAST of Cucsa.240710.1 vs. NCBI nr
Match: gi|641840293|gb|KDO59215.1| (hypothetical protein CISIN_1g028432mg [Citrus sinensis]) HSP 1 Score: 270.0 bits (689), Expect = 3.2e-69 Identity = 133/177 (75.14%), Postives = 151/177 (85.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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