Cucsa.218960 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.218960
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
Descriptionpathogenesis-related gene 1
Locationscaffold01658 : 854688 .. 856019 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATGGCAGATCAAGATTTTATGGCTACTTTACCATTTGGAGGATCAACCTCCTCTAGTGTGGTTGGAAGGTTCATCCAACTTCCTCAATGCGGTGGCCCTCCCAGTCGCGGGACAGGTAACTCTTTCCAACTTCATCTTAGATTATAACATTGATACTAAAAAGCCAAGATGGGGTGTGTTCTCTCTGTTAGAAAGTAAGGTTTTATGCCATATCTCTTTTGGCATCAAAGTGTGTGTTTCTTCATAACTAAATTAGACTTACAATTAAAACTAGTACCACTCAATTACAGTTAAAAAAaGTTTCTAAACAAAGTTTAAGTACATTTTTTACGTTTTTTtAGAGGTCATAAATACTCACGTTCTTGATGTTTTTTAAAACTAGAAAACAATTTTTTACAGTTTTTTCATATATATAAGATAAAGAATAGTTCTTGACGGCTTTTAAATGTCATGAACACTCACATTTTTTATTGTTTTTACTCATGAATAATGGTACAAGACTAATTTCAATATAGTAGAGTCTATCCCAAGTGAAAAAAAGACTTTTTAGGCAACACTTTTTATTACTACATACACATCAAACTGTCTATATATTACACTTTTTTTCTCATTAGTTATATCATGTTCATGAATACTTTTAGTATAATGGTAGAATATAGTAACAGAAACATATTATCTAGTAAAAAAaTATAACATTTAACTTAGTTGAGTGTATACTTTTTGCCTATAAATCACACATCTCGTTTTGATTTGATGATCTCCACACCAAAACTTCTCAACATTTTGTATATCATAACTCTCGACAAAACCAAATAATATGGATATGTTCTCAAGCTCTCCCTTTAATTCCCTCACCCTCTTTTGTGTCTTTACCTAATTTGTCATGATTTTCCATCTTCTCTTGCTCAAGACTCACCTCAAGACTTCGTCGGTGTCCACAACGTAGCTCGTGCACAAGTTGGCGTTGGGCCGATTGAGTGGGACAAAACAGTAGTGAGTTTTGCTCAACAATACGCGAACCAACGCTTCAACGACTGTAGGCTAGTGCACTCTGGCGGACCTTACGGGGAGAATATTGCATGGGGCAGCCCAGACTTATCAGCCAAAGATGCAGTTCAGTTGTGGGTGGATGAGAAGCCATTCTACAATTATGAGACCAATACATGTGCGGCTGGCGAGTTGTGTGGTCATTACACTCAAGTAGTGTGGAGGAAGTCAGTCAGAATTGGATGTGCCAAAGTGAGATGCACAGATAATATTGGTGGCACATTCATCATTTGCAACTATGAACCCCCTGGCAATTTCTTATACCAAAGGCCATATTGA

mRNA sequence

ATGGCGATGGCAGATCAAGATTTTATGGCTACTTTACCATTTGGAGGATCAACCTCCTCTAGTGTGGTTGGAAGGTTCATCCAACTTCCTCAATGCGGTGGCCCTCCCAGTCGCGGGACAGACTCACCTCAAGACTTCGTCGGTGTCCACAACGTAGCTCGTGCACAAGTTGGCGTTGGGCCGATTGAGTGGGACAAAACAGTAGTGAGTTTTGCTCAACAATACGCGAACCAACGCTTCAACGACTGTAGGCTAGTGCACTCTGGCGGACCTTACGGGGAGAATATTGCATGGGGCAGCCCAGACTTATCAGCCAAAGATGCAGTTCAGTTGTGGGTGGATGAGAAGCCATTCTACAATTATGAGACCAATACATGTGCGGCTGGCGAGTTGTGTGGTCATTACACTCAAGTAGTGTGGAGGAAGTCAGTCAGAATTGGATGTGCCAAAGTGAGATGCACAGATAATATTGGTGGCACATTCATCATTTGCAACTATGAACCCCCTGGCAATTTCTTATACCAAAGGCCATATTGA

Coding sequence (CDS)

ATGGCGATGGCAGATCAAGATTTTATGGCTACTTTACCATTTGGAGGATCAACCTCCTCTAGTGTGGTTGGAAGGTTCATCCAACTTCCTCAATGCGGTGGCCCTCCCAGTCGCGGGACAGACTCACCTCAAGACTTCGTCGGTGTCCACAACGTAGCTCGTGCACAAGTTGGCGTTGGGCCGATTGAGTGGGACAAAACAGTAGTGAGTTTTGCTCAACAATACGCGAACCAACGCTTCAACGACTGTAGGCTAGTGCACTCTGGCGGACCTTACGGGGAGAATATTGCATGGGGCAGCCCAGACTTATCAGCCAAAGATGCAGTTCAGTTGTGGGTGGATGAGAAGCCATTCTACAATTATGAGACCAATACATGTGCGGCTGGCGAGTTGTGTGGTCATTACACTCAAGTAGTGTGGAGGAAGTCAGTCAGAATTGGATGTGCCAAAGTGAGATGCACAGATAATATTGGTGGCACATTCATCATTTGCAACTATGAACCCCCTGGCAATTTCTTATACCAAAGGCCATATTGA

Protein sequence

MAMADQDFMATLPFGGSTSSSVVGRFIQLPQCGGPPSRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIAWGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGTFIICNYEPPGNFLYQRPY*
Homology
[Close]
BLAST of Cucsa.218960 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 6.8e-50
Identity = 89/143 (62.24%), Postives = 109/143 (76.22%), Query Frame = 1 

Query: 36  PSRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGEN 95
           PS+  DSPQD++ VHN AR  VGVGP++WD+ V ++A+ YA Q   +CRL+HSGGPYGEN
Sbjct: 23  PSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGEN 82

Query: 96  IAWGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTD 155
           +AWGS DLS   AV +WV EK  YNY  NTC    +CGHYTQVVWRKSVR+GCAKVRC  
Sbjct: 83  LAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRKSVRLGCAKVRC-- 142

Query: 156 NIGGTFIICNYEPPGNFLYQRPY 179
           N GGT I CNY+P GN++ ++PY
Sbjct: 143 NNGGTIISCNYDPRGNYVNEKPY 161

[Close]
BLAST of Cucsa.218960 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 6.4e-48
Identity = 88/143 (61.54%), Postives = 107/143 (74.83%), Query Frame = 1 

Query: 36  PSRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGEN 95
           P +  DS QD+V  HN AR+Q+GVGP++WD+ + ++A+ YANQ   DCRLVHS GPYGEN
Sbjct: 23  PLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGEN 82

Query: 96  IAWGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTD 155
           +A    DLS   AV LWV+EK  YNY+TNTC    +CGHYTQVVWR SVR+GCAKVRC  
Sbjct: 83  LAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRC-- 142

Query: 156 NIGGTFIICNYEPPGNFLYQRPY 179
           N GGT I CNY+PPGN+  Q+PY
Sbjct: 143 NNGGTIISCNYDPPGNYANQKPY 161

[Close]
BLAST of Cucsa.218960 vs. Swiss-Prot
Match: PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 8.3e-48
Identity = 89/144 (61.81%), Postives = 105/144 (72.92%), Query Frame = 1 

Query: 37  SRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENI 96
           S+  +SPQD+V  HN AR+ VGVG + W   + +FAQ YANQR NDC+L HSGGPYGENI
Sbjct: 22  SQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENI 81

Query: 97  AWGS--PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCT 156
            WGS   D  A DAV  WV+EK  YNY +NTCAAG++CGHYTQVVWR S  IGCA+V C 
Sbjct: 82  FWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCN 141

Query: 157 DNIGGTFIICNYEPPGNFLYQRPY 179
           +N  G FI CNYEP GN + Q+PY
Sbjct: 142 NN-RGVFITCNYEPRGNIVGQKPY 164

[Close]
BLAST of Cucsa.218960 vs. Swiss-Prot
Match: PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-47
Identity = 89/144 (61.81%), Postives = 104/144 (72.22%), Query Frame = 1 

Query: 37  SRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENI 96
           S+  +SPQD+V  HN ARA VGVG + W   + +FAQ YANQR NDC+L HSGGPYGENI
Sbjct: 22  SQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENI 81

Query: 97  AWGS--PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCT 156
            WGS   D  A DAV  WV EK  Y+Y +NTCAAG++CGHYTQVVWR S  IGCA+V C 
Sbjct: 82  FWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCN 141

Query: 157 DNIGGTFIICNYEPPGNFLYQRPY 179
           +N  G FI CNYEP GN + Q+PY
Sbjct: 142 NN-RGVFITCNYEPRGNIVGQKPY 164

[Close]
BLAST of Cucsa.218960 vs. Swiss-Prot
Match: PR1_HORVU (Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.4e-47
Identity = 88/144 (61.11%), Postives = 104/144 (72.22%), Query Frame = 1 

Query: 37  SRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENI 96
           S+  +SPQD+V  HN AR+ VGVG + W   + +FAQ YANQR NDC+L HSGGPYGENI
Sbjct: 22  SQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENI 81

Query: 97  AWGS--PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCT 156
            WGS   D  A DAV  WV EK  Y+Y +NTCAAG++CGHYTQVVWR S  IGCA+V C 
Sbjct: 82  FWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCN 141

Query: 157 DNIGGTFIICNYEPPGNFLYQRPY 179
           +N  G FI CNYEP GN + Q+PY
Sbjct: 142 NN-RGVFITCNYEPRGNIIGQKPY 164

[Close]
BLAST of Cucsa.218960 vs. TrEMBL
Match: Q8S3W2_CUCSA (Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis sativus GN=PR1-1a PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 8.6e-76
Identity = 133/138 (96.38%), Postives = 135/138 (97.83%), Query Frame = 1 

Query: 41  DSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIAWGS 100
           DSPQDFVGVHNVARAQVGVGPIEWDKTV SFAQQYAN+R NDCRLV+SGGPYGENIAWGS
Sbjct: 3   DSPQDFVGVHNVARAQVGVGPIEWDKTVASFAQQYANRRLNDCRLVNSGGPYGENIAWGS 62

Query: 101 PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 160
           PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT
Sbjct: 63  PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 122

Query: 161 FIICNYEPPGNFLYQRPY 179
           FIICNYEP GNFLYQRPY
Sbjct: 123 FIICNYEPRGNFLYQRPY 140

[Close]
BLAST of Cucsa.218960 vs. TrEMBL
Match: H3K3Z2_CUCSA (Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis sativus GN=PR1-1a PE=2 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 4.4e-72
Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 1 

Query: 41  DSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIAWGS 100
           DSPQDFVGVHNVARAQVGVGPIEWDKTV SFAQQYAN+RFNDCRLV+SGGPYGENIAWGS
Sbjct: 2   DSPQDFVGVHNVARAQVGVGPIEWDKTVASFAQQYANRRFNDCRLVNSGGPYGENIAWGS 61

Query: 101 PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 160
           PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT
Sbjct: 62  PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 121

Query: 161 FIICNYEPPG 171
           FIICNYEPPG
Sbjct: 122 FIICNYEPPG 131

[Close]
BLAST of Cucsa.218960 vs. TrEMBL
Match: A0A0A0K6A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 4.7e-58
Identity = 105/144 (72.92%), Postives = 118/144 (81.94%), Query Frame = 1 

Query: 35  PPSRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGE 94
           P S   DSPQDF+  HN ARAQ GV P++WD+TV SFA QYANQR NDC LVHSGGPYGE
Sbjct: 22  PSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQRINDCSLVHSGGPYGE 81

Query: 95  NIAWGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCT 154
           NIAWG PDLS   AV++WV+EK FY+Y +NTCAA  +CGHYTQVVWR SVRIGCAKV CT
Sbjct: 82  NIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVVWRNSVRIGCAKVICT 141

Query: 155 DNIGGTFIICNYEPPGNFLYQRPY 179
           +N GGTFI CNY+PPGNF+ QRPY
Sbjct: 142 NN-GGTFITCNYDPPGNFVGQRPY 164

[Close]
BLAST of Cucsa.218960 vs. TrEMBL
Match: H3K3Z1_CUCME (Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo GN=PR1-1a PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 9.0e-57
Identity = 103/130 (79.23%), Postives = 113/130 (86.92%), Query Frame = 1 

Query: 41  DSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIAWGS 100
           DSP+DFV  HN ARAQVGVGP+ WD+ V SFA+QYANQR NDCRLVHSGGPYGENIAWG 
Sbjct: 2   DSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWGM 61

Query: 101 PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 160
           PDLS   AVQ+WV+EK FYNY +NTCAAG++CGHYTQVVWR SVRIGCAKVRCT+N  GT
Sbjct: 62  PDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNN-RGT 121

Query: 161 FIICNYEPPG 171
           FIICNYEP G
Sbjct: 122 FIICNYEPRG 130

[Close]
BLAST of Cucsa.218960 vs. TrEMBL
Match: B9S7U9_RICCO (STS14 protein, putative OS=Ricinus communis GN=RCOM_1381930 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.4e-56
Identity = 101/142 (71.13%), Postives = 114/142 (80.28%), Query Frame = 1 

Query: 37  SRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENI 96
           S   + PQD++  HN ARA VGVGP+ WD TV ++AQ YANQR NDCRLVHSGG YGENI
Sbjct: 22  SHAQNLPQDYINAHNAARAAVGVGPMTWDNTVAAYAQNYANQRINDCRLVHSGGRYGENI 81

Query: 97  AWGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDN 156
           AW S DLS   AV+LWVDEK FYNY +NTCAAG+ CGHYTQVVWR SVR+GCAKVRC + 
Sbjct: 82  AWSSGDLSGTAAVKLWVDEKAFYNYNSNTCAAGQQCGHYTQVVWRNSVRLGCAKVRCRN- 141

Query: 157 IGGTFIICNYEPPGNFLYQRPY 179
            GGTFI CNY+PPGNF+ QRPY
Sbjct: 142 -GGTFITCNYDPPGNFVNQRPY 161

[Close]
BLAST of Cucsa.218960 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 198.4 bits (503), Expect = 3.8e-51
Identity = 89/143 (62.24%), Postives = 109/143 (76.22%), Query Frame = 1 

Query: 36  PSRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGEN 95
           PS+  DSPQD++ VHN AR  VGVGP++WD+ V ++A+ YA Q   +CRL+HSGGPYGEN
Sbjct: 23  PSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGEN 82

Query: 96  IAWGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTD 155
           +AWGS DLS   AV +WV EK  YNY  NTC    +CGHYTQVVWRKSVR+GCAKVRC  
Sbjct: 83  LAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRKSVRLGCAKVRC-- 142

Query: 156 NIGGTFIICNYEPPGNFLYQRPY 179
           N GGT I CNY+P GN++ ++PY
Sbjct: 143 NNGGTIISCNYDPRGNYVNEKPY 161

[Close]
BLAST of Cucsa.218960 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 191.8 bits (486), Expect = 3.6e-49
Identity = 88/143 (61.54%), Postives = 107/143 (74.83%), Query Frame = 1 

Query: 36  PSRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGEN 95
           P +  DS QD+V  HN AR+Q+GVGP++WD+ + ++A+ YANQ   DCRLVHS GPYGEN
Sbjct: 23  PLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGEN 82

Query: 96  IAWGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTD 155
           +A    DLS   AV LWV+EK  YNY+TNTC    +CGHYTQVVWR SVR+GCAKVRC  
Sbjct: 83  LAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRC-- 142

Query: 156 NIGGTFIICNYEPPGNFLYQRPY 179
           N GGT I CNY+PPGN+  Q+PY
Sbjct: 143 NNGGTIISCNYDPPGNYANQKPY 161

[Close]
BLAST of Cucsa.218960 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 188.0 bits (476), Expect = 5.2e-48
Identity = 84/141 (59.57%), Postives = 106/141 (75.18%), Query Frame = 1 

Query: 38  RGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIA 97
           +  DSPQDF+ VHN ARA+VGVGP+ WD+ V ++A+ YANQR  DC + HS G YGENIA
Sbjct: 25  KAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSGSYGENIA 84

Query: 98  WGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNI 157
           W S  ++   AV +WVDE+  Y+Y++NTCA  + CGHYTQVVWR S R+GCAKVRC  N 
Sbjct: 85  WSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAKVRC--NN 144

Query: 158 GGTFIICNYEPPGNFLYQRPY 179
           G TFI CNY+PPGN++ + PY
Sbjct: 145 GQTFITCNYDPPGNWVGEWPY 163

[Close]
BLAST of Cucsa.218960 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 176.4 bits (446), Expect = 1.6e-44
Identity = 78/144 (54.17%), Postives = 105/144 (72.92%), Query Frame = 1 

Query: 37  SRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENI 96
           S   D  Q F+  HN AR +VG+ P+ WD  V ++A  YANQR NDC LVHS GP+GENI
Sbjct: 20  SLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCALVHSNGPFGENI 79

Query: 97  AWGSPDLSAKDAVQLWVDEKPFYNYETNTC--AAGELCGHYTQVVWRKSVRIGCAKVRCT 156
           A  S ++SA+DA ++W++EK +Y+Y++NTC    G  C HYTQVVW+ +VR+GCAKV C 
Sbjct: 80  AMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWKNTVRLGCAKVVC- 139

Query: 157 DNIGGTFIICNYEPPGNFLYQRPY 179
            N GGTFI CNY+PPGN++ ++P+
Sbjct: 140 -NSGGTFITCNYDPPGNYIGEKPF 161

[Close]
BLAST of Cucsa.218960 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 165.6 bits (418), Expect = 2.8e-41
Identity = 77/139 (55.40%), Postives = 99/139 (71.22%), Query Frame = 1 

Query: 41  DSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIAWGS 100
           ++PQD++  HN ARAQVGV  + WD T+ ++A  Y+N R  DC LVHS GPYGEN+A GS
Sbjct: 25  NTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGPYGENLAKGS 84

Query: 101 PD-LSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGG 160
               SA  AV+LWVDEKP+Y+Y  N C  G+ C HYTQVVWR SV+IGCA+V+CT+    
Sbjct: 85  SSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVKIGCARVQCTNT--W 144

Query: 161 TFIICNYEPPGNFLYQRPY 179
            F+ CNY  PGN++ + PY
Sbjct: 145 WFVSCNYNSPGNWVGEYPY 161

[Close]
BLAST of Cucsa.218960 vs. NCBI nr
Match: gi|778724780|ref|XP_011658860.1| (PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 377.9 bits (969), Expect = 1.0e-101
Identity = 175/178 (98.31%), Postives = 177/178 (99.44%), Query Frame = 1 

Query: 1   MAMADQDFMATLPFGGSTSSSVVGRFIQLPQCGGPPSRGTDSPQDFVGVHNVARAQVGVG 60
           MAMADQDFMATLPFGGSTSSSVVGRFIQLPQCGGPPSRGTDSPQDFVGVHNVARAQVGVG
Sbjct: 26  MAMADQDFMATLPFGGSTSSSVVGRFIQLPQCGGPPSRGTDSPQDFVGVHNVARAQVGVG 85

Query: 61  PIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIAWGSPDLSAKDAVQLWVDEKPFYN 120
           PIEWDKTV SFAQQYAN+RFNDCRLV+SGGPYGENIAWGSPDLSAKDAVQLWVDEKPFYN
Sbjct: 86  PIEWDKTVASFAQQYANRRFNDCRLVNSGGPYGENIAWGSPDLSAKDAVQLWVDEKPFYN 145

Query: 121 YETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGTFIICNYEPPGNFLYQRPY 179
           YETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGTFIICNYEPPGNFLYQRPY
Sbjct: 146 YETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGTFIICNYEPPGNFLYQRPY 203

[Close]
BLAST of Cucsa.218960 vs. NCBI nr
Match: gi|19073340|gb|AAL84768.1|AF475286_1 (pathogenesis-related protein 1-1a [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 1.2e-75
Identity = 133/138 (96.38%), Postives = 135/138 (97.83%), Query Frame = 1 

Query: 41  DSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIAWGS 100
           DSPQDFVGVHNVARAQVGVGPIEWDKTV SFAQQYAN+R NDCRLV+SGGPYGENIAWGS
Sbjct: 3   DSPQDFVGVHNVARAQVGVGPIEWDKTVASFAQQYANRRLNDCRLVNSGGPYGENIAWGS 62

Query: 101 PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 160
           PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT
Sbjct: 63  PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 122

Query: 161 FIICNYEPPGNFLYQRPY 179
           FIICNYEP GNFLYQRPY
Sbjct: 123 FIICNYEPRGNFLYQRPY 140

[Close]
BLAST of Cucsa.218960 vs. NCBI nr
Match: gi|377347207|dbj|BAL63013.1| (pathogenesis-related protein 1-1a, partial [Cucumis sativus])

HSP 1 Score: 278.9 bits (712), Expect = 6.3e-72
Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 1 

Query: 41  DSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIAWGS 100
           DSPQDFVGVHNVARAQVGVGPIEWDKTV SFAQQYAN+RFNDCRLV+SGGPYGENIAWGS
Sbjct: 2   DSPQDFVGVHNVARAQVGVGPIEWDKTVASFAQQYANRRFNDCRLVNSGGPYGENIAWGS 61

Query: 101 PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 160
           PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT
Sbjct: 62  PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 121

Query: 161 FIICNYEPPG 171
           FIICNYEPPG
Sbjct: 122 FIICNYEPPG 131

[Close]
BLAST of Cucsa.218960 vs. NCBI nr
Match: gi|659110129|ref|XP_008455064.1| (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo])

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-60
Identity = 117/170 (68.82%), Postives = 129/170 (75.88%), Query Frame = 1 

Query: 9   MATLPFGGSTSSSVVGRFIQLPQCGGPPSRGTDSPQDFVGVHNVARAQVGVGPIEWDKTV 68
           M  L    S S   V  FI LP      S   DSP+DFV  HN ARAQVGVGP+ WD+ V
Sbjct: 1   MDVLKLSLSLSLFCVLTFIMLPS-----SLAQDSPRDFVNAHNAARAQVGVGPVHWDERV 60

Query: 69  VSFAQQYANQRFNDCRLVHSGGPYGENIAWGSPDLSAKDAVQLWVDEKPFYNYETNTCAA 128
            SFA+QYANQR NDCRLVHSGGPYGENIAWG PDLS   AVQ+WV+EK FYNY +NTCAA
Sbjct: 61  ASFARQYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAA 120

Query: 129 GELCGHYTQVVWRKSVRIGCAKVRCTDNIGGTFIICNYEPPGNFLYQRPY 179
           G++CGHYTQVVWR SVRIGCAKVRCT+N  GTFIICNYEP GN + Q+PY
Sbjct: 121 GKVCGHYTQVVWRNSVRIGCAKVRCTNN-RGTFIICNYEPRGNIIGQKPY 164

[Close]
BLAST of Cucsa.218960 vs. NCBI nr
Match: gi|778724783|ref|XP_011658861.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 6.8e-58
Identity = 105/144 (72.92%), Postives = 118/144 (81.94%), Query Frame = 1 

Query: 35  PPSRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGE 94
           P S   DSPQDF+  HN ARAQ GV P++WD+TV SFA QYANQR NDC LVHSGGPYGE
Sbjct: 22  PSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQRINDCSLVHSGGPYGE 81

Query: 95  NIAWGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCT 154
           NIAWG PDLS   AV++WV+EK FY+Y +NTCAA  +CGHYTQVVWR SVRIGCAKV CT
Sbjct: 82  NIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVVWRNSVRIGCAKVICT 141

Query: 155 DNIGGTFIICNYEPPGNFLYQRPY 179
           +N GGTFI CNY+PPGNF+ QRPY
Sbjct: 142 NN-GGTFITCNYDPPGNFVGQRPY 164

The following BLAST results are available for this feature:
BLAST of Cucsa.218960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PR1_ARATH6.8e-5062.24Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1[more]
PRB1_ARATH6.4e-4861.54Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1[more]
PR12_HORVU8.3e-4861.81Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1[more]
PR13_HORVU1.4e-4761.81Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1[more]
PR1_HORVU2.4e-4761.11Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1[more]
BLAST of Cucsa.218960 vs. TrEMBL
Match NameE-valueIdentityDescription
Q8S3W2_CUCSA8.6e-7696.38Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis sativus GN=PR1-1a PE=4 S... [more]
H3K3Z2_CUCSA4.4e-7297.69Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis sativus GN=PR1-1a PE=2 S... [more]
A0A0A0K6A4_CUCSA4.7e-5872.92Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1[more]
H3K3Z1_CUCME9.0e-5779.23Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo GN=PR1-1a PE=2 SV=1[more]
B9S7U9_RICCO4.4e-5671.13STS14 protein, putative OS=Ricinus communis GN=RCOM_1381930 PE=3 SV=1[more]
BLAST of Cucsa.218960 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G14610.13.8e-5162.24 pathogenesis-related gene 1[more]
AT2G14580.13.6e-4961.54 basic pathogenesis-related protein 1[more]
AT4G33720.15.2e-4859.57 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT3G19690.11.6e-4454.17 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT1G50060.12.8e-4155.40 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
BLAST of Cucsa.218960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778724780|ref|XP_011658860.1|1.0e-10198.31PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus][more]
gi|19073340|gb|AAL84768.1|AF475286_11.2e-7596.38pathogenesis-related protein 1-1a [Cucumis sativus][more]
gi|377347207|dbj|BAL63013.1|6.3e-7297.69pathogenesis-related protein 1-1a, partial [Cucumis sativus][more]
gi|659110129|ref|XP_008455064.1|1.1e-6068.82PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo][more]
gi|778724783|ref|XP_011658861.1|6.8e-5872.92PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR002413V5_allergen
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.218960.1Cucsa.218960.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 62..80
score: 5.0E-19coord: 161..174
score: 5.0E-19coord: 108..121
score: 5.0E-19coord: 132..148
score: 5.0
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 41..178
score: 2.2
IPR002413Ves allergenPRINTSPR00838V5ALLERGENcoord: 27..47
score: 1.6E-5coord: 131..150
score: 1.6E-5coord: 106..121
score: 1.
IPR014044CAP domainGENE3DG3DSA:3.40.33.10coord: 41..178
score: 8.8
IPR014044CAP domainPFAMPF00188CAPcoord: 49..166
score: 3.8
IPR014044CAP domainSMARTSM00198SCP_3coord: 41..174
score: 2.0
IPR014044CAP domainunknownSSF55797PR-1-likecoord: 41..178
score: 7.06
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 133..143
scor
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 161..172
scor
NoneNo IPR availablePANTHERPTHR10334:SF223F2J10.6 PROTEIN-RELATEDcoord: 41..178
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.218960CSPI07G06660Wild cucumber (PI 183967)cgycpiB336
Cucsa.218960CmaCh11G016900Cucurbita maxima (Rimu)cgycmaB0620
Cucsa.218960CmoCh19G005420Cucurbita moschata (Rifu)cgycmoB0627
Cucsa.218960Cp4.1LG15g04120Cucurbita pepo (Zucchini)cgycpeB0594
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.218960Cucumber (Chinese Long) v3cgycucB336
Cucsa.218960Cucumber (Chinese Long) v3cgycucB340
Cucsa.218960Cucumber (Chinese Long) v3cgycucB342
Cucsa.218960Watermelon (97103) v2cgywmbB393
Cucsa.218960Watermelon (97103) v2cgywmbB395
Cucsa.218960Watermelon (97103) v2cgywmbB398
Cucsa.218960Wax gourdcgywgoB443
Cucsa.218960Wax gourdcgywgoB445
Cucsa.218960Wax gourdcgywgoB452
Cucsa.218960Cucumber (Gy14) v1cgycgyB118
Cucsa.218960Cucumber (Gy14) v1cgycgyB119
Cucsa.218960Cucurbita maxima (Rimu)cgycmaB0623
Cucsa.218960Cucurbita maxima (Rimu)cgycmaB0624
Cucsa.218960Cucurbita maxima (Rimu)cgycmaB0629
Cucsa.218960Cucurbita moschata (Rifu)cgycmoB0624
Cucsa.218960Cucurbita moschata (Rifu)cgycmoB0625
Cucsa.218960Cucurbita moschata (Rifu)cgycmoB0632
Cucsa.218960Wild cucumber (PI 183967)cgycpiB331
Cucsa.218960Wild cucumber (PI 183967)cgycpiB334
Cucsa.218960Cucumber (Chinese Long) v2cgycuB318
Cucsa.218960Cucumber (Chinese Long) v2cgycuB321
Cucsa.218960Cucumber (Chinese Long) v2cgycuB322
Cucsa.218960Melon (DHL92) v3.5.1cgymeB379
Cucsa.218960Melon (DHL92) v3.5.1cgymeB380
Cucsa.218960Melon (DHL92) v3.5.1cgymeB382
Cucsa.218960Melon (DHL92) v3.5.1cgymeB383
Cucsa.218960Watermelon (Charleston Gray)cgywcgB393
Cucsa.218960Watermelon (Charleston Gray)cgywcgB396
Cucsa.218960Watermelon (Charleston Gray)cgywcgB399
Cucsa.218960Watermelon (97103) v1cgywmB421
Cucsa.218960Watermelon (97103) v1cgywmB422
Cucsa.218960Watermelon (97103) v1cgywmB427
Cucsa.218960Cucurbita pepo (Zucchini)cgycpeB0592
Cucsa.218960Cucurbita pepo (Zucchini)cgycpeB0599
Cucsa.218960Cucurbita pepo (Zucchini)cgycpeB0602
Cucsa.218960Cucurbita pepo (Zucchini)cgycpeB0603
Cucsa.218960Bottle gourd (USVL1VR-Ls)cgylsiB366
Cucsa.218960Bottle gourd (USVL1VR-Ls)cgylsiB367
Cucsa.218960Bottle gourd (USVL1VR-Ls)cgylsiB370
Cucsa.218960Melon (DHL92) v3.6.1cgymedB377
Cucsa.218960Melon (DHL92) v3.6.1cgymedB378
Cucsa.218960Melon (DHL92) v3.6.1cgymedB381
Cucsa.218960Silver-seed gourdcarcgyB0221
Cucsa.218960Silver-seed gourdcarcgyB0344
Cucsa.218960Silver-seed gourdcarcgyB0524
Cucsa.218960Silver-seed gourdcarcgyB0825