CmoCh19G005420 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G005420
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Cysteine-rich venom protein
Location	Cmo_Chr19 : 6281534 .. 6282025 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTTTTCAAGCTCTCCCTCTCCATCTTCTATGTCGTCTTGAGCTTTGCCATGTTTCGTTCCTCTCTAGCTCAAGACTCGCCTCAAGACTTTGTCAATGCCCACAATGCAGCTCGTGCCCAAGTTGGCGTTGGGCCAGTCCAGTGGGATGAAAGGGTAGCTAGTTTTGCTCGACAATATGCCAACCAACGCATCAATGATTGTCGATTGGTGCACTCAGGTGGACCATATGGAGAGAATATTGCATGGGGTAGCCCTGACTTGTCAGGGACTAATGCTGTTCGGATGTGGGTTGATGAGAAACAATTCTACAATCCTAGCGCTAATACTTGTGCAGCTGGCAGGGTGTGTGGTCATTACACTCAAGTGGTGTGGAGAAACTCGGTGAGAATTGGATGTGCTAAAGTGAGATGCACAAACAATCGTGGTACATTCATCATTTGCAATTATGATCCACGCGGCAATATCATAGGCCAAAGGCCATTCTAA

mRNA sequence

ATGGATCTTTTCAAGCTCTCCCTCTCCATCTTCTATGTCGTCTTGAGCTTTGCCATGTTTCGTTCCTCTCTAGCTCAAGACTCGCCTCAAGACTTTGTCAATGCCCACAATGCAGCTCGTGCCCAAGTTGGCGTTGGGCCAGTCCAGTGGGATGAAAGGGTAGCTAGTTTTGCTCGACAATATGCCAACCAACGCATCAATGATTGTCGATTGGTGCACTCAGGTGGACCATATGGAGAGAATATTGCATGGGGTAGCCCTGACTTGTCAGGGACTAATGCTGTTCGGATGTGGGTTGATGAGAAACAATTCTACAATCCTAGCGCTAATACTTGTGCAGCTGGCAGGGTGTGTGGTCATTACACTCAAGTGGTGTGGAGAAACTCGGTGAGAATTGGATGTGCTAAAGTGAGATGCACAAACAATCGTGGTACATTCATCATTTGCAATTATGATCCACGCGGCAATATCATAGGCCAAAGGCCATTCTAA

Coding sequence (CDS)

ATGGATCTTTTCAAGCTCTCCCTCTCCATCTTCTATGTCGTCTTGAGCTTTGCCATGTTTCGTTCCTCTCTAGCTCAAGACTCGCCTCAAGACTTTGTCAATGCCCACAATGCAGCTCGTGCCCAAGTTGGCGTTGGGCCAGTCCAGTGGGATGAAAGGGTAGCTAGTTTTGCTCGACAATATGCCAACCAACGCATCAATGATTGTCGATTGGTGCACTCAGGTGGACCATATGGAGAGAATATTGCATGGGGTAGCCCTGACTTGTCAGGGACTAATGCTGTTCGGATGTGGGTTGATGAGAAACAATTCTACAATCCTAGCGCTAATACTTGTGCAGCTGGCAGGGTGTGTGGTCATTACACTCAAGTGGTGTGGAGAAACTCGGTGAGAATTGGATGTGCTAAAGTGAGATGCACAAACAATCGTGGTACATTCATCATTTGCAATTATGATCCACGCGGCAATATCATAGGCCAAAGGCCATTCTAA

Homology

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BLAST of CmoCh19G005420 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 5.8e-56
Identity = 101/154 (65.58%), Postives = 118/154 (76.62%), Query Frame = 1


Query: 10  IFYVVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQYANQRINDC 69
           I +V L  A+   S AQDSPQD++  HN AR  VGVGP+QWDERVA++AR YA Q   +C
Sbjct: 11  IVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNC 70

Query: 70  RLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCGHYTQVVWRNS 129
           RL+HSGGPYGEN+AWGS DLSG +AV MWV EK  YN +ANTC    VCGHYTQVVWR S
Sbjct: 71  RLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRKS 130

Query: 130 VRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 164
           VR+GCAKVRC NN GT I CNYDPRGN + ++P+
Sbjct: 131 VRLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

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BLAST of CmoCh19G005420 vs. Swiss-Prot
Match: PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.2e-55
Identity = 97/153 (63.40%), Postives = 118/153 (77.12%), Query Frame = 1


Query: 13  VVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQYANQRINDCRLV 72
           + +S AM   S AQ+SPQD+V+ HNAARA VGVG V W  ++ +FA+ YANQRINDC+L 
Sbjct: 12  LAMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRINDCKLQ 71

Query: 73  HSGGPYGENIAWGSP--DLSGTNAVRMWVDEKQFYNPSANTCAAGRVCGHYTQVVWRNSV 132
           HSGGPYGENI WGS   D   ++AV  WV EK+ Y+  +NTCAAG+VCGHYTQVVWR S 
Sbjct: 72  HSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRAST 131

Query: 133 RIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 164
            IGCA+V C NNRG FI CNY+PRGNI+GQ+P+
Sbjct: 132 SIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

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BLAST of CmoCh19G005420 vs. Swiss-Prot
Match: PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 2.9e-55
Identity = 96/153 (62.75%), Postives = 118/153 (77.12%), Query Frame = 1


Query: 13  VVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQYANQRINDCRLV 72
           + ++ AM   S AQ+SPQD+V+ HNAAR+ VGVG V W  ++ +FA+ YANQRINDC+L 
Sbjct: 12  LAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQ 71

Query: 73  HSGGPYGENIAWGSP--DLSGTNAVRMWVDEKQFYNPSANTCAAGRVCGHYTQVVWRNSV 132
           HSGGPYGENI WGS   D    +AV  WV+EK+ YN  +NTCAAG+VCGHYTQVVWR S 
Sbjct: 72  HSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQVVWRAST 131

Query: 133 RIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 164
            IGCA+V C NNRG FI CNY+PRGNI+GQ+P+
Sbjct: 132 SIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

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BLAST of CmoCh19G005420 vs. Swiss-Prot
Match: PR1_HORVU (Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 8.4e-55
Identity = 96/153 (62.75%), Postives = 118/153 (77.12%), Query Frame = 1


Query: 13  VVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQYANQRINDCRLV 72
           + ++ AM   S AQ+SPQD+V+ HNAAR+ VGVG V W  ++ +FA+ YANQRINDC+L 
Sbjct: 12  LAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQ 71

Query: 73  HSGGPYGENIAWGSP--DLSGTNAVRMWVDEKQFYNPSANTCAAGRVCGHYTQVVWRNSV 132
           HSGGPYGENI WGS   D   ++AV  WV EK+ Y+  +NTCAAG+VCGHYTQVVWR S 
Sbjct: 72  HSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRAST 131

Query: 133 RIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 164
            IGCA+V C NNRG FI CNY+PRGNIIGQ+P+
Sbjct: 132 SIGCARVVCNNNRGVFITCNYEPRGNIIGQKPY 164

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BLAST of CmoCh19G005420 vs. Swiss-Prot
Match: PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.1e-54
Identity = 105/164 (64.02%), Postives = 126/164 (76.83%), Query Frame = 1


Query: 2   DLFKLSLSIFYVVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQY 61
           +LF ++L     V++  M + S+AQ+SPQD+V+AHNAAR+ V VGPV WDE VA+FARQY
Sbjct: 8   NLFSVAL---VCVVALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQY 67

Query: 62  ANQRINDCRLVHSGGP-YGENIAWGSP-DLSGTNAVRMWVDEKQFYNPSANTCAAGRVCG 121
           A  R  DCRLVHSG P YGEN+A+GS  +L+G NAV MWV E+  YNP+ NTCA G+VCG
Sbjct: 68  AQSRAGDCRLVHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCG 127

Query: 122 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 164
           HYTQVVWRNSVRIGCA+VRC NN   FI CNY P GN  GQRP+
Sbjct: 128 HYTQVVWRNSVRIGCARVRC-NNGAWFITCNYSPPGNYAGQRPY 167

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BLAST of CmoCh19G005420 vs. TrEMBL
Match: A0A0A0K6A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 6.4e-70
Identity = 128/164 (78.05%), Postives = 140/164 (85.37%), Query Frame = 1


Query: 1   MDLFKLSLSI-FYVVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFAR 60
           MD+ KLSLS+  + VL+F M  SSLAQDSPQDF++AHN ARAQ GV PVQWDE VASFA 
Sbjct: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCG 120
           QYANQRINDC LVHSGGPYGENIAWG PDLSGT AV MWV+EK+FY+  +NTCAA RVCG
Sbjct: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 164
           HYTQVVWRNSVRIGCAKV CTNN GTFI CNYDP GN +GQRP+
Sbjct: 121 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

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BLAST of CmoCh19G005420 vs. TrEMBL
Match: A0A0A0K2V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 1.9e-69
Identity = 116/163 (71.17%), Postives = 143/163 (87.73%), Query Frame = 1


Query: 1   MDLFKLSLSIFYVVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQ 60
           MDL  LS  +F V+  F M  SSLAQDSPQD+VN+HN ARA VGVGP++WDE+VA+++R 
Sbjct: 1   MDLLNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRY 60

Query: 61  YANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCGH 120
           YAN+R+NDCRLVHS GPYGENIAWGSPDLSG NAV++WVDEKQ+YN ++N+CA+G+VCGH
Sbjct: 61  YANKRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGH 120

Query: 121 YTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 164
           YTQVVW+NS+R+GCAKV+C N  G FI+CNYDPRGNI+GQRP+
Sbjct: 121 YTQVVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

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BLAST of CmoCh19G005420 vs. TrEMBL
Match: H3K3Z1_CUCME (Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo GN=PR1-1a PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 2.7e-68
Identity = 119/130 (91.54%), Postives = 125/130 (96.15%), Query Frame = 1


Query: 26  QDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQYANQRINDCRLVHSGGPYGENIAWG 85
           QDSP+DFVNAHNAARAQVGVGPV WDERVASFARQYANQRINDCRLVHSGGPYGENIAWG
Sbjct: 1   QDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWG 60

Query: 86  SPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCGHYTQVVWRNSVRIGCAKVRCTNNRGT 145
            PDLSGT AV+MWV+EKQFYN  +NTCAAG+VCGHYTQVVWRNSVRIGCAKVRCTNNRGT
Sbjct: 61  MPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNRGT 120

Query: 146 FIICNYDPRG 156
           FIICNY+PRG
Sbjct: 121 FIICNYEPRG 130

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BLAST of CmoCh19G005420 vs. TrEMBL
Match: W9R7L7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003726 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 7.6e-63
Identity = 106/151 (70.20%), Postives = 131/151 (86.75%), Query Frame = 1


Query: 13  VVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQYANQRINDCRLV 72
           V++  AM ++S AQDSPQDF+NAHN+ARA+VGVG + WD++VAS+A+QYAN  I DC +V
Sbjct: 17  VIIGLAMLQASNAQDSPQDFLNAHNSARAEVGVGQMTWDDKVASYAQQYANSHIGDCSMV 76

Query: 73  HSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCGHYTQVVWRNSVRI 132
           HSGGPYGEN+AW S DLSGT+AVRMWV+EK  Y+  +NTCA+G+VCGHYTQVVWRNSVR+
Sbjct: 77  HSGGPYGENLAWSSGDLSGTDAVRMWVNEKADYDYGSNTCASGKVCGHYTQVVWRNSVRL 136

Query: 133 GCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 164
           GCAKVRC NN+GT I CNYDPRGN +GQ+P+
Sbjct: 137 GCAKVRCNNNKGTLIGCNYDPRGNYVGQKPY 167

[Close]

BLAST of CmoCh19G005420 vs. TrEMBL
Match: Q8S3W2_CUCSA (Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis sativus GN=PR1-1a PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.3e-62
Identity = 109/140 (77.86%), Postives = 124/140 (88.57%), Query Frame = 1


Query: 25  AQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQYANQRINDCRLVHSGGPYGENIAW 84
           AQDSPQDFV  HN ARAQVGVGP++WD+ VASFA+QYAN+R+NDCRLV+SGGPYGENIAW
Sbjct: 1   AQDSPQDFVGVHNVARAQVGVGPIEWDKTVASFAQQYANRRLNDCRLVNSGGPYGENIAW 60

Query: 85  GSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCGHYTQVVWRNSVRIGCAKVRCTNN-R 144
           GSPDLS  +AV++WVDEK FYN   NTCAAG +CGHYTQVVWR SVRIGCAKVRCT+N  
Sbjct: 61  GSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIG 120

Query: 145 GTFIICNYDPRGNIIGQRPF 164
           GTFIICNY+PRGN + QRP+
Sbjct: 121 GTFIICNYEPRGNFLYQRPY 140

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BLAST of CmoCh19G005420 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 218.4 bits (555), Expect = 3.3e-57
Identity = 101/154 (65.58%), Postives = 118/154 (76.62%), Query Frame = 1


Query: 10  IFYVVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQYANQRINDC 69
           I +V L  A+   S AQDSPQD++  HN AR  VGVGP+QWDERVA++AR YA Q   +C
Sbjct: 11  IVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNC 70

Query: 70  RLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCGHYTQVVWRNS 129
           RL+HSGGPYGEN+AWGS DLSG +AV MWV EK  YN +ANTC    VCGHYTQVVWR S
Sbjct: 71  RLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRKS 130

Query: 130 VRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 164
           VR+GCAKVRC NN GT I CNYDPRGN + ++P+
Sbjct: 131 VRLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of CmoCh19G005420 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 203.4 bits (516), Expect = 1.1e-52
Identity = 94/139 (67.63%), Postives = 107/139 (76.98%), Query Frame = 1


Query: 25  AQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQYANQRINDCRLVHSGGPYGENIAW 84
           AQDS QD+VNAHN AR+Q+GVGP+QWDE +A++AR YANQ   DCRLVHS GPYGEN+A 
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 85  GSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCGHYTQVVWRNSVRIGCAKVRCTNNRG 144
              DLSG  AV +WV+EK  YN   NTC    VCGHYTQVVWRNSVR+GCAKVRC NN G
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRC-NNGG 145

Query: 145 TFIICNYDPRGNIIGQRPF 164
           T I CNYDP GN   Q+P+
Sbjct: 146 TIISCNYDPPGNYANQKPY 161

[Close]

BLAST of CmoCh19G005420 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 203.4 bits (516), Expect = 1.1e-52
Identity = 96/164 (58.54%), Postives = 119/164 (72.56%), Query Frame = 1


Query: 1   MDLFKLSLSIFYVVLSFAMFRSSL-AQDSPQDFVNAHNAARAQVGVGPVQWDERVASFAR 60
           M +F  S ++F  +  F +    L AQDSPQDF+  HN ARA+VGVGP++WDE+VA++AR
Sbjct: 1   MKIFNSSQNLFLAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCG 120
            YANQR  DC + HS G YGENIAW S  ++G  AV MWVDE+  Y+  +NTCA  + CG
Sbjct: 61  NYANQRKGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 164
           HYTQVVWRNS R+GCAKVRC NN  TFI CNYDP GN +G+ P+
Sbjct: 121 HYTQVVWRNSERLGCAKVRC-NNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of CmoCh19G005420 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 194.9 bits (494), Expect = 3.9e-50
Identity = 88/152 (57.89%), Postives = 114/152 (75.00%), Query Frame = 1


Query: 14  VLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQYANQRINDCRLVH 73
           +L+ A+F  SLA+D  Q F+ AHN AR +VG+ P+ WD+ VA++A  YANQRINDC LVH
Sbjct: 11  LLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCALVH 70

Query: 74  SGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTC--AAGRVCGHYTQVVWRNSVR 133
           S GP+GENIA  S ++S  +A  MW++EKQ+Y+  +NTC    G  C HYTQVVW+N+VR
Sbjct: 71  SNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWKNTVR 130

Query: 134 IGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 164
           +GCAKV C N+ GTFI CNYDP GN IG++PF
Sbjct: 131 LGCAKVVC-NSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of CmoCh19G005420 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 171.4 bits (433), Expect = 4.6e-43
Identity = 83/164 (50.61%), Postives = 115/164 (70.12%), Query Frame = 1


Query: 1   MDLFKLSLSIFYVVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQ 60
           M+ FK    +  V +SF +  ++ AQ++PQD++N+HN ARAQVGV  V WD  +A++A  
Sbjct: 1   MNTFKTPFLVI-VAISFLVVATN-AQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALN 60

Query: 61  YANQRINDCRLVHSGGPYGENIAWG-SPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCG 120
           Y+N R  DC LVHS GPYGEN+A G S   S  +AV++WVDEK +Y+ + N C  G+ C 
Sbjct: 61  YSNFRKADCNLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCL 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 164
           HYTQVVWR+SV+IGCA+V+CTN    F+ CNY+  GN +G+ P+
Sbjct: 121 HYTQVVWRDSVKIGCARVQCTNT-WWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of CmoCh19G005420 vs. NCBI nr
Match: gi|659110129|ref|XP_008455064.1| (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo])

HSP 1 Score: 300.4 bits (768), Expect = 1.9e-78
Identity = 140/164 (85.37%), Postives = 152/164 (92.68%), Query Frame = 1


Query: 1   MDLFKLSLSI-FYVVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFAR 60
           MD+ KLSLS+  + VL+F M  SSLAQDSP+DFVNAHNAARAQVGVGPV WDERVASFAR
Sbjct: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCG 120
           QYANQRINDCRLVHSGGPYGENIAWG PDLSGT AV+MWV+EKQFYN  +NTCAAG+VCG
Sbjct: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 164
           HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNY+PRGNIIGQ+P+
Sbjct: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of CmoCh19G005420 vs. NCBI nr
Match: gi|778724783|ref|XP_011658861.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 271.6 bits (693), Expect = 9.2e-70
Identity = 128/164 (78.05%), Postives = 140/164 (85.37%), Query Frame = 1


Query: 1   MDLFKLSLSI-FYVVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFAR 60
           MD+ KLSLS+  + VL+F M  SSLAQDSPQDF++AHN ARAQ GV PVQWDE VASFA 
Sbjct: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCG 120
           QYANQRINDC LVHSGGPYGENIAWG PDLSGT AV MWV+EK+FY+  +NTCAA RVCG
Sbjct: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 164
           HYTQVVWRNSVRIGCAKV CTNN GTFI CNYDP GN +GQRP+
Sbjct: 121 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of CmoCh19G005420 vs. NCBI nr
Match: gi|778724786|ref|XP_004136929.2| (PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 2.7e-69
Identity = 116/163 (71.17%), Postives = 143/163 (87.73%), Query Frame = 1


Query: 1   MDLFKLSLSIFYVVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQ 60
           MDL  LS  +F V+  F M  SSLAQDSPQD+VN+HN ARA VGVGP++WDE+VA+++R 
Sbjct: 1   MDLLNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRY 60

Query: 61  YANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCGH 120
           YAN+R+NDCRLVHS GPYGENIAWGSPDLSG NAV++WVDEKQ+YN ++N+CA+G+VCGH
Sbjct: 61  YANKRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGH 120

Query: 121 YTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 164
           YTQVVW+NS+R+GCAKV+C N  G FI+CNYDPRGNI+GQRP+
Sbjct: 121 YTQVVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of CmoCh19G005420 vs. NCBI nr
Match: gi|377347202|dbj|BAL63012.1| (pathogenesis-related protein 1-1a, partial [Cucumis melo])

HSP 1 Score: 266.2 bits (679), Expect = 3.9e-68
Identity = 119/130 (91.54%), Postives = 125/130 (96.15%), Query Frame = 1


Query: 26  QDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQYANQRINDCRLVHSGGPYGENIAWG 85
           QDSP+DFVNAHNAARAQVGVGPV WDERVASFARQYANQRINDCRLVHSGGPYGENIAWG
Sbjct: 1   QDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWG 60

Query: 86  SPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCGHYTQVVWRNSVRIGCAKVRCTNNRGT 145
            PDLSGT AV+MWV+EKQFYN  +NTCAAG+VCGHYTQVVWRNSVRIGCAKVRCTNNRGT
Sbjct: 61  MPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNRGT 120

Query: 146 FIICNYDPRG 156
           FIICNY+PRG
Sbjct: 121 FIICNYEPRG 130

[Close]

BLAST of CmoCh19G005420 vs. NCBI nr
Match: gi|659110127|ref|XP_008455062.1| (PREDICTED: pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 258.8 bits (660), Expect = 6.2e-66
Identity = 113/163 (69.33%), Postives = 139/163 (85.28%), Query Frame = 1


Query: 1   MDLFKLSLSIFYVVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQ 60
           MDL  LS  +F V+  F M  SSLAQDSPQD++N HN ARA V V  +QWDE+VA+++RQ
Sbjct: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ 60

Query: 61  YANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCGH 120
           YAN R+NDCRLVHS GPYGENIAWGSPDLSGT+AV++WV+EKQ+Y+ + N+CA+G+VCGH
Sbjct: 61  YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH 120

Query: 121 YTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 164
           YTQVVW+NSVR+GCAKV+C N  G FI+CNYDPRGNI+GQRP+
Sbjct: 121 YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 163

The following BLAST results are available for this feature:

BLAST of CmoCh19G005420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PR1_ARATH	5.8e-56	65.58	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1	[more]
PR13_HORVU	2.2e-55	63.40	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1	[more]
PR12_HORVU	2.9e-55	62.75	Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1	[more]
PR1_HORVU	8.4e-55	62.75	Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1	[more]
PR1_SAMNI	1.1e-54	64.02	Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1	[more]

BLAST of CmoCh19G005420 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6A4_CUCSA	6.4e-70	78.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1	[more]
A0A0A0K2V9_CUCSA	1.9e-69	71.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1	[more]
H3K3Z1_CUCME	2.7e-68	91.54	Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo GN=PR1-1a PE=2 SV=1	[more]
W9R7L7_9ROSA	7.6e-63	70.20	Uncharacterized protein OS=Morus notabilis GN=L484_003726 PE=3 SV=1	[more]
Q8S3W2_CUCSA	1.3e-62	77.86	Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis sativus GN=PR1-1a PE=4 S...	[more]

BLAST of CmoCh19G005420 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14610.1	3.3e-57	65.58	pathogenesis-related gene 1	[more]
AT2G14580.1	1.1e-52	67.63	basic pathogenesis-related protein 1	[more]
AT4G33720.1	1.1e-52	58.54	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT3G19690.1	3.9e-50	57.89	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT1G50060.1	4.6e-43	50.61	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]

BLAST of CmoCh19G005420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110129\|ref\|XP_008455064.1\|	1.9e-78	85.37	PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo]	[more]
gi\|778724783\|ref\|XP_011658861.1\|	9.2e-70	78.05	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|778724786\|ref\|XP_004136929.2\|	2.7e-69	71.17	PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|377347202\|dbj\|BAL63012.1\|	3.9e-68	91.54	pathogenesis-related protein 1-1a, partial [Cucumis melo]	[more]
gi\|659110127\|ref\|XP_008455062.1\|	6.2e-66	69.33	PREDICTED: pathogenesis-related protein 1-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G005420.1	CmoCh19G005420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 94..107 score: 9.8E-20coord: 48..66 score: 9.8E-20coord: 146..159 score: 9.8E-20coord: 118..134 score: 9.8
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..163 score: 1.2
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 24..163 score: 1.9
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 33..151 score: 1.7
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 27..159 score: 1.3
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 17..163 score: 3.01
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 119..129 scor
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 146..157 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 1..163 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G005420	Cucsa.218960	Cucumber (Gy14) v1	cgycmoB0627
CmoCh19G005420	CmaCh11G016900	Cucurbita maxima (Rimu)	cmacmoB143
CmoCh19G005420	CmaCh19G005330	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G005420	CSPI07G06660	Wild cucumber (PI 183967)	cmocpiB525
CmoCh19G005420	Cp4.1LG15g04120	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G005420	Cp4.1LG04g07420	Cucurbita pepo (Zucchini)	cmocpeB494

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G005420	Cucumber (Chinese Long) v3	cmocucB0623
CmoCh19G005420	Watermelon (97103) v2	cmowmbB505
CmoCh19G005420	Watermelon (97103) v2	cmowmbB512
CmoCh19G005420	Wax gourd	cmowgoB0635
CmoCh19G005420	Wax gourd	cmowgoB0642
CmoCh19G005420	Cucurbita moschata (Rifu)	cmocmoB110
CmoCh19G005420	Cucurbita moschata (Rifu)	cmocmoB395
CmoCh19G005420	Cucumber (Chinese Long) v2	cmocuB519
CmoCh19G005420	Melon (DHL92) v3.5.1	cmomeB454
CmoCh19G005420	Melon (DHL92) v3.5.1	cmomeB475
CmoCh19G005420	Watermelon (Charleston Gray)	cmowcgB454
CmoCh19G005420	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G005420	Watermelon (97103) v1	cmowmB478
CmoCh19G005420	Watermelon (97103) v1	cmowmB496
CmoCh19G005420	Bottle gourd (USVL1VR-Ls)	cmolsiB467
CmoCh19G005420	Bottle gourd (USVL1VR-Ls)	cmolsiB468
CmoCh19G005420	Cucumber (Gy14) v2	cgybcmoB928
CmoCh19G005420	Melon (DHL92) v3.6.1	cmomedB523
CmoCh19G005420	Melon (DHL92) v3.6.1	cmomedB550
CmoCh19G005420	Silver-seed gourd	carcmoB0615
CmoCh19G005420	Silver-seed gourd	carcmoB0998