Cucsa.218960.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.218960.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	pathogenesis-related gene 1
Location	scaffold01658 : 854688 .. 856019 (+)
Sequence length	537

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATGGCAGATCAAGATTTTATGGCTACTTTACCATTTGGAGGATCAACCTCCTCTAGTGTGGTTGGAAGGTTCATCCAACTTCCTCAATGCGGTGGCCCTCCCAGTCGCGGGACAGGTAACTCTTTCCAACTTCATCTTAGATTATAACATTGATACTAAAAAGCCAAGATGGGGTGTGTTCTCTCTGTTAGAAAGTAAGGTTTTATGCCATATCTCTTTTGGCATCAAAGTGTGTGTTTCTTCATAACTAAATTAGACTTACAATTAAAACTAGTACCACTCAATTACAGTTAAAAAAaGTTTCTAAACAAAGTTTAAGTACATTTTTTACGTTTTTTtAGAGGTCATAAATACTCACGTTCTTGATGTTTTTTAAAACTAGAAAACAATTTTTTACAGTTTTTTCATATATATAAGATAAAGAATAGTTCTTGACGGCTTTTAAATGTCATGAACACTCACATTTTTTATTGTTTTTACTCATGAATAATGGTACAAGACTAATTTCAATATAGTAGAGTCTATCCCAAGTGAAAAAAAGACTTTTTAGGCAACACTTTTTATTACTACATACACATCAAACTGTCTATATATTACACTTTTTTTCTCATTAGTTATATCATGTTCATGAATACTTTTAGTATAATGGTAGAATATAGTAACAGAAACATATTATCTAGTAAAAAAaTATAACATTTAACTTAGTTGAGTGTATACTTTTTGCCTATAAATCACACATCTCGTTTTGATTTGATGATCTCCACACCAAAACTTCTCAACATTTTGTATATCATAACTCTCGACAAAACCAAATAATATGGATATGTTCTCAAGCTCTCCCTTTAATTCCCTCACCCTCTTTTGTGTCTTTACCTAATTTGTCATGATTTTCCATCTTCTCTTGCTCAAGACTCACCTCAAGACTTCGTCGGTGTCCACAACGTAGCTCGTGCACAAGTTGGCGTTGGGCCGATTGAGTGGGACAAAACAGTAGTGAGTTTTGCTCAACAATACGCGAACCAACGCTTCAACGACTGTAGGCTAGTGCACTCTGGCGGACCTTACGGGGAGAATATTGCATGGGGCAGCCCAGACTTATCAGCCAAAGATGCAGTTCAGTTGTGGGTGGATGAGAAGCCATTCTACAATTATGAGACCAATACATGTGCGGCTGGCGAGTTGTGTGGTCATTACACTCAAGTAGTGTGGAGGAAGTCAGTCAGAATTGGATGTGCCAAAGTGAGATGCACAGATAATATTGGTGGCACATTCATCATTTGCAACTATGAACCCCCTGGCAATTTCTTATACCAAAGGCCATATTGA

mRNA sequence

ATGGCGATGGCAGATCAAGATTTTATGGCTACTTTACCATTTGGAGGATCAACCTCCTCTAGTGTGGTTGGAAGGTTCATCCAACTTCCTCAATGCGGTGGCCCTCCCAGTCGCGGGACAGACTCACCTCAAGACTTCGTCGGTGTCCACAACGTAGCTCGTGCACAAGTTGGCGTTGGGCCGATTGAGTGGGACAAAACAGTAGTGAGTTTTGCTCAACAATACGCGAACCAACGCTTCAACGACTGTAGGCTAGTGCACTCTGGCGGACCTTACGGGGAGAATATTGCATGGGGCAGCCCAGACTTATCAGCCAAAGATGCAGTTCAGTTGTGGGTGGATGAGAAGCCATTCTACAATTATGAGACCAATACATGTGCGGCTGGCGAGTTGTGTGGTCATTACACTCAAGTAGTGTGGAGGAAGTCAGTCAGAATTGGATGTGCCAAAGTGAGATGCACAGATAATATTGGTGGCACATTCATCATTTGCAACTATGAACCCCCTGGCAATTTCTTATACCAAAGGCCATATTGA

Coding sequence (CDS)

ATGGCGATGGCAGATCAAGATTTTATGGCTACTTTACCATTTGGAGGATCAACCTCCTCTAGTGTGGTTGGAAGGTTCATCCAACTTCCTCAATGCGGTGGCCCTCCCAGTCGCGGGACAGACTCACCTCAAGACTTCGTCGGTGTCCACAACGTAGCTCGTGCACAAGTTGGCGTTGGGCCGATTGAGTGGGACAAAACAGTAGTGAGTTTTGCTCAACAATACGCGAACCAACGCTTCAACGACTGTAGGCTAGTGCACTCTGGCGGACCTTACGGGGAGAATATTGCATGGGGCAGCCCAGACTTATCAGCCAAAGATGCAGTTCAGTTGTGGGTGGATGAGAAGCCATTCTACAATTATGAGACCAATACATGTGCGGCTGGCGAGTTGTGTGGTCATTACACTCAAGTAGTGTGGAGGAAGTCAGTCAGAATTGGATGTGCCAAAGTGAGATGCACAGATAATATTGGTGGCACATTCATCATTTGCAACTATGAACCCCCTGGCAATTTCTTATACCAAAGGCCATATTGA

Protein sequence

MAMADQDFMATLPFGGSTSSSVVGRFIQLPQCGGPPSRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIAWGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGTFIICNYEPPGNFLYQRPY*

Homology

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BLAST of Cucsa.218960.1 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 6.8e-50
Identity = 89/143 (62.24%), Postives = 109/143 (76.22%), Query Frame = 1


Query: 36  PSRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGEN 95
           PS+  DSPQD++ VHN AR  VGVGP++WD+ V ++A+ YA Q   +CRL+HSGGPYGEN
Sbjct: 23  PSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGEN 82

Query: 96  IAWGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTD 155
           +AWGS DLS   AV +WV EK  YNY  NTC    +CGHYTQVVWRKSVR+GCAKVRC  
Sbjct: 83  LAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRKSVRLGCAKVRC-- 142

Query: 156 NIGGTFIICNYEPPGNFLYQRPY 179
           N GGT I CNY+P GN++ ++PY
Sbjct: 143 NNGGTIISCNYDPRGNYVNEKPY 161

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BLAST of Cucsa.218960.1 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 6.4e-48
Identity = 88/143 (61.54%), Postives = 107/143 (74.83%), Query Frame = 1


Query: 36  PSRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGEN 95
           P +  DS QD+V  HN AR+Q+GVGP++WD+ + ++A+ YANQ   DCRLVHS GPYGEN
Sbjct: 23  PLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGEN 82

Query: 96  IAWGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTD 155
           +A    DLS   AV LWV+EK  YNY+TNTC    +CGHYTQVVWR SVR+GCAKVRC  
Sbjct: 83  LAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRC-- 142

Query: 156 NIGGTFIICNYEPPGNFLYQRPY 179
           N GGT I CNY+PPGN+  Q+PY
Sbjct: 143 NNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Cucsa.218960.1 vs. Swiss-Prot
Match: PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 8.3e-48
Identity = 89/144 (61.81%), Postives = 105/144 (72.92%), Query Frame = 1


Query: 37  SRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENI 96
           S+  +SPQD+V  HN AR+ VGVG + W   + +FAQ YANQR NDC+L HSGGPYGENI
Sbjct: 22  SQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENI 81

Query: 97  AWGS--PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCT 156
            WGS   D  A DAV  WV+EK  YNY +NTCAAG++CGHYTQVVWR S  IGCA+V C 
Sbjct: 82  FWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCN 141

Query: 157 DNIGGTFIICNYEPPGNFLYQRPY 179
           +N  G FI CNYEP GN + Q+PY
Sbjct: 142 NN-RGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Cucsa.218960.1 vs. Swiss-Prot
Match: PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-47
Identity = 89/144 (61.81%), Postives = 104/144 (72.22%), Query Frame = 1


Query: 37  SRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENI 96
           S+  +SPQD+V  HN ARA VGVG + W   + +FAQ YANQR NDC+L HSGGPYGENI
Sbjct: 22  SQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENI 81

Query: 97  AWGS--PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCT 156
            WGS   D  A DAV  WV EK  Y+Y +NTCAAG++CGHYTQVVWR S  IGCA+V C 
Sbjct: 82  FWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCN 141

Query: 157 DNIGGTFIICNYEPPGNFLYQRPY 179
           +N  G FI CNYEP GN + Q+PY
Sbjct: 142 NN-RGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Cucsa.218960.1 vs. Swiss-Prot
Match: PR1_HORVU (Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.4e-47
Identity = 88/144 (61.11%), Postives = 104/144 (72.22%), Query Frame = 1


Query: 37  SRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENI 96
           S+  +SPQD+V  HN AR+ VGVG + W   + +FAQ YANQR NDC+L HSGGPYGENI
Sbjct: 22  SQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENI 81

Query: 97  AWGS--PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCT 156
            WGS   D  A DAV  WV EK  Y+Y +NTCAAG++CGHYTQVVWR S  IGCA+V C 
Sbjct: 82  FWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCN 141

Query: 157 DNIGGTFIICNYEPPGNFLYQRPY 179
           +N  G FI CNYEP GN + Q+PY
Sbjct: 142 NN-RGVFITCNYEPRGNIIGQKPY 164

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BLAST of Cucsa.218960.1 vs. TrEMBL
Match: Q8S3W2_CUCSA (Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis sativus GN=PR1-1a PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 8.6e-76
Identity = 133/138 (96.38%), Postives = 135/138 (97.83%), Query Frame = 1


Query: 41  DSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIAWGS 100
           DSPQDFVGVHNVARAQVGVGPIEWDKTV SFAQQYAN+R NDCRLV+SGGPYGENIAWGS
Sbjct: 3   DSPQDFVGVHNVARAQVGVGPIEWDKTVASFAQQYANRRLNDCRLVNSGGPYGENIAWGS 62

Query: 101 PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 160
           PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT
Sbjct: 63  PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 122

Query: 161 FIICNYEPPGNFLYQRPY 179
           FIICNYEP GNFLYQRPY
Sbjct: 123 FIICNYEPRGNFLYQRPY 140

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BLAST of Cucsa.218960.1 vs. TrEMBL
Match: H3K3Z2_CUCSA (Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis sativus GN=PR1-1a PE=2 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 4.4e-72
Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 1


Query: 41  DSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIAWGS 100
           DSPQDFVGVHNVARAQVGVGPIEWDKTV SFAQQYAN+RFNDCRLV+SGGPYGENIAWGS
Sbjct: 2   DSPQDFVGVHNVARAQVGVGPIEWDKTVASFAQQYANRRFNDCRLVNSGGPYGENIAWGS 61

Query: 101 PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 160
           PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT
Sbjct: 62  PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 121

Query: 161 FIICNYEPPG 171
           FIICNYEPPG
Sbjct: 122 FIICNYEPPG 131

[Close]

BLAST of Cucsa.218960.1 vs. TrEMBL
Match: A0A0A0K6A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 4.7e-58
Identity = 105/144 (72.92%), Postives = 118/144 (81.94%), Query Frame = 1


Query: 35  PPSRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGE 94
           P S   DSPQDF+  HN ARAQ GV P++WD+TV SFA QYANQR NDC LVHSGGPYGE
Sbjct: 22  PSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQRINDCSLVHSGGPYGE 81

Query: 95  NIAWGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCT 154
           NIAWG PDLS   AV++WV+EK FY+Y +NTCAA  +CGHYTQVVWR SVRIGCAKV CT
Sbjct: 82  NIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVVWRNSVRIGCAKVICT 141

Query: 155 DNIGGTFIICNYEPPGNFLYQRPY 179
           +N GGTFI CNY+PPGNF+ QRPY
Sbjct: 142 NN-GGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of Cucsa.218960.1 vs. TrEMBL
Match: H3K3Z1_CUCME (Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo GN=PR1-1a PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 9.0e-57
Identity = 103/130 (79.23%), Postives = 113/130 (86.92%), Query Frame = 1


Query: 41  DSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIAWGS 100
           DSP+DFV  HN ARAQVGVGP+ WD+ V SFA+QYANQR NDCRLVHSGGPYGENIAWG 
Sbjct: 2   DSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWGM 61

Query: 101 PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 160
           PDLS   AVQ+WV+EK FYNY +NTCAAG++CGHYTQVVWR SVRIGCAKVRCT+N  GT
Sbjct: 62  PDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNN-RGT 121

Query: 161 FIICNYEPPG 171
           FIICNYEP G
Sbjct: 122 FIICNYEPRG 130

[Close]

BLAST of Cucsa.218960.1 vs. TrEMBL
Match: B9S7U9_RICCO (STS14 protein, putative OS=Ricinus communis GN=RCOM_1381930 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.4e-56
Identity = 101/142 (71.13%), Postives = 114/142 (80.28%), Query Frame = 1


Query: 37  SRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENI 96
           S   + PQD++  HN ARA VGVGP+ WD TV ++AQ YANQR NDCRLVHSGG YGENI
Sbjct: 22  SHAQNLPQDYINAHNAARAAVGVGPMTWDNTVAAYAQNYANQRINDCRLVHSGGRYGENI 81

Query: 97  AWGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDN 156
           AW S DLS   AV+LWVDEK FYNY +NTCAAG+ CGHYTQVVWR SVR+GCAKVRC + 
Sbjct: 82  AWSSGDLSGTAAVKLWVDEKAFYNYNSNTCAAGQQCGHYTQVVWRNSVRLGCAKVRCRN- 141

Query: 157 IGGTFIICNYEPPGNFLYQRPY 179
            GGTFI CNY+PPGNF+ QRPY
Sbjct: 142 -GGTFITCNYDPPGNFVNQRPY 161

[Close]

BLAST of Cucsa.218960.1 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 198.4 bits (503), Expect = 3.8e-51
Identity = 89/143 (62.24%), Postives = 109/143 (76.22%), Query Frame = 1


Query: 36  PSRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGEN 95
           PS+  DSPQD++ VHN AR  VGVGP++WD+ V ++A+ YA Q   +CRL+HSGGPYGEN
Sbjct: 23  PSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGEN 82

Query: 96  IAWGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTD 155
           +AWGS DLS   AV +WV EK  YNY  NTC    +CGHYTQVVWRKSVR+GCAKVRC  
Sbjct: 83  LAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRKSVRLGCAKVRC-- 142

Query: 156 NIGGTFIICNYEPPGNFLYQRPY 179
           N GGT I CNY+P GN++ ++PY
Sbjct: 143 NNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cucsa.218960.1 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 191.8 bits (486), Expect = 3.6e-49
Identity = 88/143 (61.54%), Postives = 107/143 (74.83%), Query Frame = 1


Query: 36  PSRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGEN 95
           P +  DS QD+V  HN AR+Q+GVGP++WD+ + ++A+ YANQ   DCRLVHS GPYGEN
Sbjct: 23  PLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGEN 82

Query: 96  IAWGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTD 155
           +A    DLS   AV LWV+EK  YNY+TNTC    +CGHYTQVVWR SVR+GCAKVRC  
Sbjct: 83  LAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRC-- 142

Query: 156 NIGGTFIICNYEPPGNFLYQRPY 179
           N GGT I CNY+PPGN+  Q+PY
Sbjct: 143 NNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Cucsa.218960.1 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 188.0 bits (476), Expect = 5.2e-48
Identity = 84/141 (59.57%), Postives = 106/141 (75.18%), Query Frame = 1


Query: 38  RGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIA 97
           +  DSPQDF+ VHN ARA+VGVGP+ WD+ V ++A+ YANQR  DC + HS G YGENIA
Sbjct: 25  KAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSGSYGENIA 84

Query: 98  WGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNI 157
           W S  ++   AV +WVDE+  Y+Y++NTCA  + CGHYTQVVWR S R+GCAKVRC  N 
Sbjct: 85  WSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAKVRC--NN 144

Query: 158 GGTFIICNYEPPGNFLYQRPY 179
           G TFI CNY+PPGN++ + PY
Sbjct: 145 GQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Cucsa.218960.1 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 176.4 bits (446), Expect = 1.6e-44
Identity = 78/144 (54.17%), Postives = 105/144 (72.92%), Query Frame = 1


Query: 37  SRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENI 96
           S   D  Q F+  HN AR +VG+ P+ WD  V ++A  YANQR NDC LVHS GP+GENI
Sbjct: 20  SLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCALVHSNGPFGENI 79

Query: 97  AWGSPDLSAKDAVQLWVDEKPFYNYETNTC--AAGELCGHYTQVVWRKSVRIGCAKVRCT 156
           A  S ++SA+DA ++W++EK +Y+Y++NTC    G  C HYTQVVW+ +VR+GCAKV C 
Sbjct: 80  AMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWKNTVRLGCAKVVC- 139

Query: 157 DNIGGTFIICNYEPPGNFLYQRPY 179
            N GGTFI CNY+PPGN++ ++P+
Sbjct: 140 -NSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of Cucsa.218960.1 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 165.6 bits (418), Expect = 2.8e-41
Identity = 77/139 (55.40%), Postives = 99/139 (71.22%), Query Frame = 1


Query: 41  DSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIAWGS 100
           ++PQD++  HN ARAQVGV  + WD T+ ++A  Y+N R  DC LVHS GPYGEN+A GS
Sbjct: 25  NTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGPYGENLAKGS 84

Query: 101 PD-LSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGG 160
               SA  AV+LWVDEKP+Y+Y  N C  G+ C HYTQVVWR SV+IGCA+V+CT+    
Sbjct: 85  SSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVKIGCARVQCTNT--W 144

Query: 161 TFIICNYEPPGNFLYQRPY 179
            F+ CNY  PGN++ + PY
Sbjct: 145 WFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of Cucsa.218960.1 vs. NCBI nr
Match: gi|778724780|ref|XP_011658860.1| (PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 377.9 bits (969), Expect = 1.0e-101
Identity = 175/178 (98.31%), Postives = 177/178 (99.44%), Query Frame = 1


Query: 1   MAMADQDFMATLPFGGSTSSSVVGRFIQLPQCGGPPSRGTDSPQDFVGVHNVARAQVGVG 60
           MAMADQDFMATLPFGGSTSSSVVGRFIQLPQCGGPPSRGTDSPQDFVGVHNVARAQVGVG
Sbjct: 26  MAMADQDFMATLPFGGSTSSSVVGRFIQLPQCGGPPSRGTDSPQDFVGVHNVARAQVGVG 85

Query: 61  PIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIAWGSPDLSAKDAVQLWVDEKPFYN 120
           PIEWDKTV SFAQQYAN+RFNDCRLV+SGGPYGENIAWGSPDLSAKDAVQLWVDEKPFYN
Sbjct: 86  PIEWDKTVASFAQQYANRRFNDCRLVNSGGPYGENIAWGSPDLSAKDAVQLWVDEKPFYN 145

Query: 121 YETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGTFIICNYEPPGNFLYQRPY 179
           YETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGTFIICNYEPPGNFLYQRPY
Sbjct: 146 YETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGTFIICNYEPPGNFLYQRPY 203

[Close]

BLAST of Cucsa.218960.1 vs. NCBI nr
Match: gi|19073340|gb|AAL84768.1|AF475286_1 (pathogenesis-related protein 1-1a [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 1.2e-75
Identity = 133/138 (96.38%), Postives = 135/138 (97.83%), Query Frame = 1


Query: 41  DSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIAWGS 100
           DSPQDFVGVHNVARAQVGVGPIEWDKTV SFAQQYAN+R NDCRLV+SGGPYGENIAWGS
Sbjct: 3   DSPQDFVGVHNVARAQVGVGPIEWDKTVASFAQQYANRRLNDCRLVNSGGPYGENIAWGS 62

Query: 101 PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 160
           PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT
Sbjct: 63  PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 122

Query: 161 FIICNYEPPGNFLYQRPY 179
           FIICNYEP GNFLYQRPY
Sbjct: 123 FIICNYEPRGNFLYQRPY 140

[Close]

BLAST of Cucsa.218960.1 vs. NCBI nr
Match: gi|377347207|dbj|BAL63013.1| (pathogenesis-related protein 1-1a, partial [Cucumis sativus])

HSP 1 Score: 278.9 bits (712), Expect = 6.3e-72
Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 1


Query: 41  DSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGENIAWGS 100
           DSPQDFVGVHNVARAQVGVGPIEWDKTV SFAQQYAN+RFNDCRLV+SGGPYGENIAWGS
Sbjct: 2   DSPQDFVGVHNVARAQVGVGPIEWDKTVASFAQQYANRRFNDCRLVNSGGPYGENIAWGS 61

Query: 101 PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 160
           PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT
Sbjct: 62  PDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCTDNIGGT 121

Query: 161 FIICNYEPPG 171
           FIICNYEPPG
Sbjct: 122 FIICNYEPPG 131

[Close]

BLAST of Cucsa.218960.1 vs. NCBI nr
Match: gi|659110129|ref|XP_008455064.1| (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo])

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-60
Identity = 117/170 (68.82%), Postives = 129/170 (75.88%), Query Frame = 1


Query: 9   MATLPFGGSTSSSVVGRFIQLPQCGGPPSRGTDSPQDFVGVHNVARAQVGVGPIEWDKTV 68
           M  L    S S   V  FI LP      S   DSP+DFV  HN ARAQVGVGP+ WD+ V
Sbjct: 1   MDVLKLSLSLSLFCVLTFIMLPS-----SLAQDSPRDFVNAHNAARAQVGVGPVHWDERV 60

Query: 69  VSFAQQYANQRFNDCRLVHSGGPYGENIAWGSPDLSAKDAVQLWVDEKPFYNYETNTCAA 128
            SFA+QYANQR NDCRLVHSGGPYGENIAWG PDLS   AVQ+WV+EK FYNY +NTCAA
Sbjct: 61  ASFARQYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAA 120

Query: 129 GELCGHYTQVVWRKSVRIGCAKVRCTDNIGGTFIICNYEPPGNFLYQRPY 179
           G++CGHYTQVVWR SVRIGCAKVRCT+N  GTFIICNYEP GN + Q+PY
Sbjct: 121 GKVCGHYTQVVWRNSVRIGCAKVRCTNN-RGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of Cucsa.218960.1 vs. NCBI nr
Match: gi|778724783|ref|XP_011658861.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 6.8e-58
Identity = 105/144 (72.92%), Postives = 118/144 (81.94%), Query Frame = 1


Query: 35  PPSRGTDSPQDFVGVHNVARAQVGVGPIEWDKTVVSFAQQYANQRFNDCRLVHSGGPYGE 94
           P S   DSPQDF+  HN ARAQ GV P++WD+TV SFA QYANQR NDC LVHSGGPYGE
Sbjct: 22  PSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQRINDCSLVHSGGPYGE 81

Query: 95  NIAWGSPDLSAKDAVQLWVDEKPFYNYETNTCAAGELCGHYTQVVWRKSVRIGCAKVRCT 154
           NIAWG PDLS   AV++WV+EK FY+Y +NTCAA  +CGHYTQVVWR SVRIGCAKV CT
Sbjct: 82  NIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVVWRNSVRIGCAKVICT 141

Query: 155 DNIGGTFIICNYEPPGNFLYQRPY 179
           +N GGTFI CNY+PPGNF+ QRPY
Sbjct: 142 NN-GGTFITCNYDPPGNFVGQRPY 164

The following BLAST results are available for this feature:

BLAST of Cucsa.218960.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PR1_ARATH	6.8e-50	62.24	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1	[more]
PRB1_ARATH	6.4e-48	61.54	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]
PR12_HORVU	8.3e-48	61.81	Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1	[more]
PR13_HORVU	1.4e-47	61.81	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1	[more]
PR1_HORVU	2.4e-47	61.11	Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1	[more]

BLAST of Cucsa.218960.1 vs. TrEMBL


Match Name	E-value	Identity	Description
Q8S3W2_CUCSA	8.6e-76	96.38	Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis sativus GN=PR1-1a PE=4 S...	[more]
H3K3Z2_CUCSA	4.4e-72	97.69	Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis sativus GN=PR1-1a PE=2 S...	[more]
A0A0A0K6A4_CUCSA	4.7e-58	72.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1	[more]
H3K3Z1_CUCME	9.0e-57	79.23	Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo GN=PR1-1a PE=2 SV=1	[more]
B9S7U9_RICCO	4.4e-56	71.13	STS14 protein, putative OS=Ricinus communis GN=RCOM_1381930 PE=3 SV=1	[more]

BLAST of Cucsa.218960.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14610.1	3.8e-51	62.24	pathogenesis-related gene 1	[more]
AT2G14580.1	3.6e-49	61.54	basic pathogenesis-related protein 1	[more]
AT4G33720.1	5.2e-48	59.57	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT3G19690.1	1.6e-44	54.17	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT1G50060.1	2.8e-41	55.40	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]

BLAST of Cucsa.218960.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778724780\|ref\|XP_011658860.1\|	1.0e-101	98.31	PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|19073340\|gb\|AAL84768.1\|AF475286_1	1.2e-75	96.38	pathogenesis-related protein 1-1a [Cucumis sativus]	[more]
gi\|377347207\|dbj\|BAL63013.1\|	6.3e-72	97.69	pathogenesis-related protein 1-1a, partial [Cucumis sativus]	[more]
gi\|659110129\|ref\|XP_008455064.1\|	1.1e-60	68.82	PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo]	[more]
gi\|778724783\|ref\|XP_011658861.1\|	6.8e-58	72.92	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR002413	V5_allergen
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.218960	Cucsa.218960	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.218960.1	Cucsa.218960.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.218960.1.CDS.1	Cucsa.218960.1.CDS.1	CDS
Cucsa.218960.1.CDS.2	Cucsa.218960.1.CDS.2	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 62..80 score: 5.0E-19coord: 161..174 score: 5.0E-19coord: 108..121 score: 5.0E-19coord: 132..148 score: 5.0
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 41..178 score: 2.2
IPR002413	Ves allergen	PRINTS	PR00838	V5ALLERGEN	coord: 27..47 score: 1.6E-5coord: 131..150 score: 1.6E-5coord: 106..121 score: 1.
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 41..178 score: 8.8
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 49..166 score: 3.8
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 41..174 score: 2.0
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 41..178 score: 7.06
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 133..143 scor
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 161..172 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 41..178 score: 2.2