Cucsa.218690 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAATAGACTTTGATTGGTTGAGCTTAAATTGTATCTTTGAGTTTTGTTTGGAAGGGTCAAGCATAATTGATGTGTGTTATTTCATTATTTAAAAAAAATGAATATATATATATACATATTTGAATATGTTGTTTCTTGTTTAGGAGATTTGAATCCGTGGGAATGAAAAATGGTGCGAATAATGATCAAGTTTCAAATGAAGTAGTGATTAGTGAGATTAAACCAAATCATTGGGGTGATACTGTGATATCAATCAAGAGCAAGCTGGAACAACTGCCTGTTGTTAATAAAGAATGCAAGATTTATAGAGTTCCCAAATTGCTATGTCAAATGAAAAAGACGACGTATGTCCCTCAAGTCATTTCTATCGGCCCTTTTCATCATGGTTCTAAAGATTTGAATGCTACAGAACCTTATAAGCTTCAAGGTCTTCGTAACTTTCTACGTCGTCTCGATAATCATAAGGAGAAATCATTGGAGGAGCTTGTGAAAATAGCTCGATCTTGGATAGAAGAAGCCCGTAGTTGTTATGTCGATCCGATAGACATGGATGACTACGAGTTTGTTAAGATGATGCTTGTGGATGGTTGTTTCATAGTAGAATTTTTTATACTTGTATACAGCCAATATACTACTTCAAATGATCATAAGTTCCCTCAAATTGATCCAAACGCTGGCCTTCTATTTTATCAAGGAATAATTCCTGACATGTATTTTGACTTGATAAAGCTCGAAAATCAACTTCCTTTCTTCATTCTCCAACGCTTGTTTGAGCTAATGCCAAAAGAAAACAACCCCAAATCTCTAATTCCGAGAGAATGAATTTTCCACCATCTCCTTTCTAGAACTTATATATGAGTTTCTTCGTCGTCTTGGGTGGATAGAAAATTATGTACAACTTGGTAAAAGAATTGTCTGATCTAAGTTTGACCTCAAACACTTGGTGGATTTCTTAAGGCTATTCTACATCTCGAGTTCAGATGACGAATGTCGTGACGACAAGAAGATTAATATTTTAAGCTTCTTCGATGTGTGTATTAAAAGGTATTGAGTGTCGTCGATTTTGTAACAAGACTAATTATAAGGAAACAAGTGAGAAGAAGATGGTCCATGCGGAAAGCAAAGAAAAACAAAGAACTCTTTCAATCTTCAAACGAACCTACTCGCCGGAATATTGTACAAAGGAGAAGAATAATTTGTTGAGCAGAACAGACTCATGTTTTTATCGGAAGAAGAAGAAGCATGAGCAAAATGACCCTGAGGAAAAGATATGGATTCCTCCATCCATAACGGAGCTCTTTGAGGCTGGTGTCACCGTAAAGAAGGCAAAAAAGTCTCCATTTATAACCAACATAACCTACAAAAATGGGGTTATGGAAATCCCACCTATAGTTATTGACGATTACTTCGAAACCATTACTCTGAAACTTGATAGCATATGAGCATCTGGCCGCAAAAAGTTATCAAGAAATGAATGTGATCTCATATATCTTATTTATGGATTGTTTGATAAGCACAAAGAAAGATGTGCGTTTACTTGAGAAGGCAGGAATCATAGTCAACGATATCGATGGCAGCGATAAAGAAGTTTCAGAATTGTTTAACAATCTCAGTAAATTTGTGCGTAGGTCAAGTGATATTAGTGCGTATTTTGAGAAATATTTCAACTATATCAGCAAAGCTTTGTGTGAGAATAATCGTAATAGACAGTGGAAAAAGTTGAAAGGTCGTTCTTTGAAACATAACTATTTCAATACGCCATGGGCTGGTATCGCTATCTTTGTTGGAACCTTCATTATTATTCTCACTCTCCTTCAAACCATATTCTCTGTTATATCTACATTTCTTAGCTAA AAAATAGACTTTGATTGGTTGAGCTTAAATTGTATCTTTGAGTTTTGTTTGGAAGGGAGATTTGAATCCGTGGGAATGAAAAATGGTGCGAATAATGATCAAGTTTCAAATGAAGTAGTGATTAGTGAGATTAAACCAAATCATTGGGGTGATACTGTGATATCAATCAAGAGCAAGCTGGAACAACTGCCTGTTGTTAATAAAGAATGCAAGATTTATAGAGTTCCCAAATTGCTATGTCAAATGAAAAAGACGACGTATGTCCCTCAAGTCATTTCTATCGGCCCTTTTCATCATGGTTCTAAAGATTTGAATGCTACAGAACCTTATAAGCTTCAAGGTCTTCGTAACTTTCTACGTCGTCTCGATAATCATAAGGAGAAATCATTGGAGGAGCTTGTGAAAATAGCTCGATCTTGGATAGAAGAAGCCCGTAGTTGTTATGTCGATCCGATAGACATGGATGACTACGAGTTTGTTAAGATGATGCTTGTGGATGGTTGTTTCATAGTAGAATTTTTTATACTTGTATACAGCCAATATACTACTTCAAATGATCATAAGTTCCCTCAAATTGATCCAAACGCTGGCCTTCTATTTTATCAAGGAATAATTCCTGACATGTATTTTGACTTGATAAAGCTCGAAAATCAACTTCCTTTCTTCATTCTCCAACGCTTTTATCAAGAAATGAATGTGATCTCATATATCTTATTTATGGATTGTTTGATAAGCACAAAGAAAGATGTGCGTTTACTTGAGAAGGCAGGAATCATAGTCAACGATATCGATGGCAGCGATAAAGAAGTTTCAGAATTGTTTAACAATCTCAGTAAATTTGTGCGTAGGTCAAGTGATATTAGTGCGTATTTTGAGAAATATTTCAACTATATCAGCAAAGCTTTGTGTGAGAATAATCGTAATAGACAGTGGAAAAAGTTGAAAGGTCGTTCTTTGAAACATAACTATTTCAATACGCCATGGGCTGGTATCGCTATCTTTGTTGGAACCTTCATTATTATTCTCACTCTCCTTCAAACCATATTCTCTGTTATATCTACATTTCTTAGCTAA AAAATAGACTTTGATTGGTTGAGCTTAAATTGTATCTTTGAGTTTTGTTTGGAAGGGAGATTTGAATCCGTGGGAATGAAAAATGGTGCGAATAATGATCAAGTTTCAAATGAAGTAGTGATTAGTGAGATTAAACCAAATCATTGGGGTGATACTGTGATATCAATCAAGAGCAAGCTGGAACAACTGCCTGTTGTTAATAAAGAATGCAAGATTTATAGAGTTCCCAAATTGCTATGTCAAATGAAAAAGACGACGTATGTCCCTCAAGTCATTTCTATCGGCCCTTTTCATCATGGTTCTAAAGATTTGAATGCTACAGAACCTTATAAGCTTCAAGGTCTTCGTAACTTTCTACGTCGTCTCGATAATCATAAGGAGAAATCATTGGAGGAGCTTGTGAAAATAGCTCGATCTTGGATAGAAGAAGCCCGTAGTTGTTATGTCGATCCGATAGACATGGATGACTACGAGTTTGTTAAGATGATGCTTGTGGATGGTTGTTTCATAGTAGAATTTTTTATACTTGTATACAGCCAATATACTACTTCAAATGATCATAAGTTCCCTCAAATTGATCCAAACGCTGGCCTTCTATTTTATCAAGGAATAATTCCTGACATGTATTTTGACTTGATAAAGCTCGAAAATCAACTTCCTTTCTTCATTCTCCAACGCTTTTATCAAGAAATGAATGTGATCTCATATATCTTATTTATGGATTGTTTGATAAGCACAAAGAAAGATGTGCGTTTACTTGAGAAGGCAGGAATCATAGTCAACGATATCGATGGCAGCGATAAAGAAGTTTCAGAATTGTTTAACAATCTCAGTAAATTTGTGCGTAGGTCAAGTGATATTAGTGCGTATTTTGAGAAATATTTCAACTATATCAGCAAAGCTTTGTGTGAGAATAATCGTAATAGACAGTGGAAAAAGTTGAAAGGTCGTTCTTTGAAACATAACTATTTCAATACGCCATGGGCTGGTATCGCTATCTTTGTTGGAACCTTCATTATTATTCTCACTCTCCTTCAAACCATATTCTCTGTTATATCTACATTTCTTAGCTAA KIDFDWLSLNCIFEFCLEGRFESVGMKNGANNDQVSNEVVISEIKPNHWGDTVISIKSKLEQLPVVNKECKIYRVPKLLCQMKKTTYVPQVISIGPFHHGSKDLNATEPYKLQGLRNFLRRLDNHKEKSLEELVKIARSWIEEARSCYVDPIDMDDYEFVKMMLVDGCFIVEFFILVYSQYTTSNDHKFPQIDPNAGLLFYQGIIPDMYFDLIKLENQLPFFILQRFYQEMNVISYILFMDCLISTKKDVRLLEKAGIIVNDIDGSDKEVSELFNNLSKFVRRSSDISAYFEKYFNYISKALCENNRNRQWKKLKGRSLKHNYFNTPWAGIAIFVGTFIIILTLLQTIFSVISTFLS*
BLAST of Cucsa.218690 vs. Swiss-Prot
Match: Y3720_ARATH (UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 7.6e-16 Identity = 53/163 (32.52%), Postives = 86/163 (52.76%), Query Frame = 1
HSP 2 Score: 75.1 bits (183), Expect = 1.7e-12 Identity = 45/151 (29.80%), Postives = 78/151 (51.66%), Query Frame = 1
BLAST of Cucsa.218690 vs. TrEMBL
Match: A0A0A0K4A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068570 PE=4 SV=1) HSP 1 Score: 416.8 bits (1070), Expect = 2.7e-113 Identity = 201/206 (97.57%), Postives = 204/206 (99.03%), Query Frame = 1
BLAST of Cucsa.218690 vs. TrEMBL
Match: A0A0A0LQ64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381630 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 5.9e-68 Identity = 138/184 (75.00%), Postives = 152/184 (82.61%), Query Frame = 1
BLAST of Cucsa.218690 vs. TrEMBL
Match: A0A0A0LQ64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381630 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 2.7e-44 Identity = 103/159 (64.78%), Postives = 123/159 (77.36%), Query Frame = 1
HSP 2 Score: 260.8 bits (665), Expect = 2.5e-66 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1
BLAST of Cucsa.218690 vs. TrEMBL
Match: A0A0A0LLX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380590 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 4.9e-46 Identity = 105/212 (49.53%), Postives = 142/212 (66.98%), Query Frame = 1
BLAST of Cucsa.218690 vs. TrEMBL
Match: A0A0A0LLX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380590 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.4e-24 Identity = 76/159 (47.80%), Postives = 97/159 (61.01%), Query Frame = 1
HSP 2 Score: 158.7 bits (400), Expect = 1.3e-35 Identity = 94/225 (41.78%), Postives = 129/225 (57.33%), Query Frame = 1
BLAST of Cucsa.218690 vs. TAIR10
Match: AT4G31980.1 (AT4G31980.1 unknown protein) HSP 1 Score: 119.0 bits (297), Expect = 5.9e-27 Identity = 66/181 (36.46%), Postives = 107/181 (59.12%), Query Frame = 1
BLAST of Cucsa.218690 vs. TAIR10
Match: AT3G50170.1 (AT3G50170.1 Plant protein of unknown function (DUF247)) HSP 1 Score: 115.2 bits (287), Expect = 8.6e-26 Identity = 73/211 (34.60%), Postives = 113/211 (53.55%), Query Frame = 1
HSP 2 Score: 76.6 bits (187), Expect = 3.4e-14 Identity = 46/126 (36.51%), Postives = 74/126 (58.73%), Query Frame = 1
BLAST of Cucsa.218690 vs. TAIR10
Match: AT3G50120.1 (AT3G50120.1 Plant protein of unknown function (DUF247)) HSP 1 Score: 108.2 bits (269), Expect = 1.0e-23 Identity = 68/212 (32.08%), Postives = 112/212 (52.83%), Query Frame = 1
HSP 2 Score: 74.3 bits (181), Expect = 1.7e-13 Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 1
BLAST of Cucsa.218690 vs. TAIR10
Match: AT2G36430.1 (AT2G36430.1 Plant protein of unknown function (DUF247)) HSP 1 Score: 105.1 bits (261), Expect = 8.9e-23 Identity = 57/159 (35.85%), Postives = 86/159 (54.09%), Query Frame = 1
BLAST of Cucsa.218690 vs. TAIR10
Match: AT3G47210.1 (AT3G47210.1 Plant protein of unknown function (DUF247)) HSP 1 Score: 104.0 bits (258), Expect = 2.0e-22 Identity = 55/166 (33.13%), Postives = 87/166 (52.41%), Query Frame = 1
HSP 2 Score: 44.3 bits (103), Expect = 1.9e-04 Identity = 30/106 (28.30%), Postives = 52/106 (49.06%), Query Frame = 1
BLAST of Cucsa.218690 vs. NCBI nr
Match: gi|700188571|gb|KGN43804.1| (hypothetical protein Csa_7G068570 [Cucumis sativus]) HSP 1 Score: 416.8 bits (1070), Expect = 3.9e-113 Identity = 201/206 (97.57%), Postives = 204/206 (99.03%), Query Frame = 1
BLAST of Cucsa.218690 vs. NCBI nr
Match: gi|659088834|ref|XP_008445186.1| (PREDICTED: putative UPF0481 protein At3g02645 [Cucumis melo]) HSP 1 Score: 351.7 bits (901), Expect = 1.5e-93 Identity = 197/324 (60.80%), Postives = 226/324 (69.75%), Query Frame = 1
BLAST of Cucsa.218690 vs. NCBI nr
Match: gi|659088834|ref|XP_008445186.1| (PREDICTED: putative UPF0481 protein At3g02645 [Cucumis melo]) HSP 1 Score: 200.7 bits (509), Expect = 4.4e-48 Identity = 114/160 (71.25%), Postives = 128/160 (80.00%), Query Frame = 1
HSP 2 Score: 266.2 bits (679), Expect = 8.5e-68 Identity = 138/184 (75.00%), Postives = 152/184 (82.61%), Query Frame = 1
BLAST of Cucsa.218690 vs. NCBI nr
Match: gi|778672484|ref|XP_011649818.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus]) HSP 1 Score: 187.6 bits (475), Expect = 3.8e-44 Identity = 103/159 (64.78%), Postives = 123/159 (77.36%), Query Frame = 1
HSP 2 Score: 260.8 bits (665), Expect = 3.6e-66 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1
BLAST of Cucsa.218690 vs. NCBI nr
Match: gi|659088838|ref|XP_008445188.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo]) HSP 1 Score: 200.7 bits (509), Expect = 4.4e-48 Identity = 107/212 (50.47%), Postives = 145/212 (68.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |