CSPI07G06370 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G06370
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 4686313 .. 4687062 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCATGCGGAAAGCAAAGAAAAACAAAGAACTCTTTCAATCTTCAAACGAACCTACTCGCCGGAATATTGTACAAAGGAGAAGAATAATTTGTTGAGCAGAACAGACTCATGTTTTTATCGGAAGAAGAAGAAGCATGAGCAAAATGACCGTGAGGAAAAGATATGGATTCCTCCATCCATGACGGAGCTCTTTGAGGCTGGTGTCACCGTAAAGAAGGCAAAAAAAGTCTCCATTTATAACCAACATAACCTACAAAAATGGGGTTATGGAAATCCCACCTATAGTTATTGACGATTACTTCGAAACCATTACTCTGAAACTTGATAGCATATGAGCATGTGGCCGCAAAAAGTTATCAAGAAATGAATGTGATCTCATATCTTATTTATGGATTGTTTGATAATAAGCACAAAGAAAGATGTGAGTTTACTTGAGAAGGCAGGAATCATAGTCAACGATATCGATGACAGCAATAAAGAAGTTTCAGAATTGTTTAACAATCTCAGTAAATTTGTGCGTAGGTCAAGTGATATTAGTGCGTATTTTGAGAAATTCAACTATATCAGCAAAGCTTTGTGTGAGAATAATCGTGACAGATATTGGAAAAAGTTGAAAGGTCGTTCTTTGAAACAAAACTATTTCAATACGCCATGGGCTGGTATCACTATCTTTGCTGGAACCTTCATTATTATTCTCACTCTCCTTCAAACCATATTCTCTGCTGTATCTACATTTCTTAGCTAA

mRNA sequence

ATGGTCCATGCGGAAAGCAAAGAAAAACAAAGAACTCTTTCAATCTTCAAACGAACCTACTCGCCGGAATATTGTACAAAGGAGAAGAATAATTTGTTGAGCAGAACAGACTCATGTTTTTATCGGAAGAAGAAGAAGCATGAGCAAAATGACCGTGAGGAAAAGATATGGATTCCTCCATCCATGACGGAGCTCTTTGAGGCTGGTGTCACCGCAGGAATCATAGTCAACGATATCGATGACAGCAATAAAGAAGTTTCAGAATTGTTTAACAATCTCAGTAAATTTGTGCGTAGGTCAAGTGATATTAGTGCGTATTTTGAGAAATTCAACTATATCAGCAAAGCTTTGTGTGAGAATAATCGTGACAGATATTGGAAAAAGTTGAAAGGTCGTTCTTTGAAACAAAACTATTTCAATACGCCATGGGCTGGTATCACTATCTTTGCTGGAACCTTCATTATTATTCTCACTCTCCTTCAAACCATATTCTCTGCTGTATCTACATTTCTTAGCTAA

Coding sequence (CDS)

ATGGTCCATGCGGAAAGCAAAGAAAAACAAAGAACTCTTTCAATCTTCAAACGAACCTACTCGCCGGAATATTGTACAAAGGAGAAGAATAATTTGTTGAGCAGAACAGACTCATGTTTTTATCGGAAGAAGAAGAAGCATGAGCAAAATGACCGTGAGGAAAAGATATGGATTCCTCCATCCATGACGGAGCTCTTTGAGGCTGGTGTCACCGCAGGAATCATAGTCAACGATATCGATGACAGCAATAAAGAAGTTTCAGAATTGTTTAACAATCTCAGTAAATTTGTGCGTAGGTCAAGTGATATTAGTGCGTATTTTGAGAAATTCAACTATATCAGCAAAGCTTTGTGTGAGAATAATCGTGACAGATATTGGAAAAAGTTGAAAGGTCGTTCTTTGAAACAAAACTATTTCAATACGCCATGGGCTGGTATCACTATCTTTGCTGGAACCTTCATTATTATTCTCACTCTCCTTCAAACCATATTCTCTGCTGTATCTACATTTCTTAGCTAA
Homology
[Close]
BLAST of CSPI07G06370 vs. TrEMBL
Match: A0A0A0K2S5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068560 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.3e-41
Identity = 92/102 (90.20%), Postives = 95/102 (93.14%), Query Frame = 1 

Query: 72  AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEK-FNYISKALCENNRDRYWKKLK 131
           AGIIVNDID S+KEVSELFNNLSKFVRRSSDISAYFEK FNYISKALCENNR+R WKKLK
Sbjct: 124 AGIIVNDIDGSDKEVSELFNNLSKFVRRSSDISAYFEKYFNYISKALCENNRNRQWKKLK 183

Query: 132 GRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTFLS 173
           GRSLK NYFNTPWAGI IF GTFIIILTLLQTIFS +STFLS
Sbjct: 184 GRSLKHNYFNTPWAGIAIFVGTFIIILTLLQTIFSVISTFLS 225

[Close]
BLAST of CSPI07G06370 vs. TrEMBL
Match: A0A0A0LQ64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381630 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-27
Identity = 70/99 (70.71%), Postives = 81/99 (81.82%), Query Frame = 1 

Query: 72  AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYWKKLKG 131
           AGIIVNDI  S+KEVS+LFNNLSKFV RS + S YF+KF  ISKALCE +RDR W KLK 
Sbjct: 417 AGIIVNDIGGSHKEVSKLFNNLSKFVNRSDNNSEYFKKFQGISKALCE-HRDRRWNKLKA 476

Query: 132 RSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF 171
            SLK NYFNTPWA I++FA T +I+LTLLQTIF+ +STF
Sbjct: 477 -SLKHNYFNTPWASISVFAATLVIVLTLLQTIFAVISTF 513

[Close]
BLAST of CSPI07G06370 vs. TrEMBL
Match: A0A0A0LQ57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380610 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.3e-16
Identity = 52/101 (51.49%), Postives = 71/101 (70.30%), Query Frame = 1 

Query: 70  VTAGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYWKKL 129
           V AG+I+ND   S+KEVSELFN+L+K V  ++ + +YF+  +   +  C+ +    W K 
Sbjct: 380 VKAGVIINDTGGSDKEVSELFNSLTKLV--TTPLPSYFDDTSKALRVHCDGS----WNKA 439

Query: 130 KGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF 171
           K  SLK +YFNTPWA I+ FA TF+IILT+LQTIFSA+S F
Sbjct: 440 KA-SLKHSYFNTPWAIISFFAATFLIILTILQTIFSAISAF 473

[Close]
BLAST of CSPI07G06370 vs. TrEMBL
Match: A0A0A0LM96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380080 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.7e-16
Identity = 53/97 (54.64%), Postives = 69/97 (71.13%), Query Frame = 1 

Query: 74  IIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYWKKLKGRS 133
           II+NDI  S++EVS+LFNNL KFV  S + +     FN IS+ L E+  DR+W K K  S
Sbjct: 354 IIINDIGGSDREVSQLFNNLCKFVSSSPNDNY----FNNISEGLREHC-DRWWNKAKA-S 413

Query: 134 LKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF 171
           LK NYFNTPWA I+  A T +++LT+LQT+FSA+S F
Sbjct: 414 LKHNYFNTPWAAISFSAATVLLVLTILQTVFSAISAF 444

[Close]
BLAST of CSPI07G06370 vs. TrEMBL
Match: A0A0A0LQ49_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380070 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.1e-14
Identity = 45/69 (65.22%), Postives = 52/69 (75.36%), Query Frame = 1 

Query: 2   VHAESKEKQRTLSIFKRTYSPEYCTKEKNNLLSRTDSCFYRKKKKHEQNDREEKIWIPPS 61
           VHAE+ EKQRT SIFKRTYSP+Y TK KNNLLSR   CF R K KHE+N     +WIPPS
Sbjct: 229 VHAENGEKQRTHSIFKRTYSPKYWTKGKNNLLSRAGLCFGRNKTKHEEN-----MWIPPS 288

Query: 62  MTELFEAGV 71
           +TE+ + GV
Sbjct: 289 ITEISKVGV 292

[Close]
BLAST of CSPI07G06370 vs. TAIR10
Match: AT4G31980.1 (AT4G31980.1 unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.6e-06
Identity = 34/99 (34.34%), Postives = 59/99 (59.60%), Query Frame = 1 

Query: 70  VTAGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYWKKL 129
           + +GIIVN + +S  +VS LFN++SK V    D   YF   +   +A C    +R WK +
Sbjct: 589 IHSGIIVNYLGNS-VDVSNLFNSISKEV--IYDRRFYFSMLSENLQAYCNTPWNR-WKAI 648

Query: 130 KGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVS 169
               L+++YF+ PWA  ++FA   +++LT +Q++ S ++
Sbjct: 649 ----LRRDYFHNPWAVASVFAALLLLLLTFIQSVCSILA 679

[Close]
BLAST of CSPI07G06370 vs. NCBI nr
Match: gi|700188570|gb|KGN43803.1| (hypothetical protein Csa_7G068560 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 3.3e-41
Identity = 92/102 (90.20%), Postives = 95/102 (93.14%), Query Frame = 1 

Query: 72  AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEK-FNYISKALCENNRDRYWKKLK 131
           AGIIVNDID S+KEVSELFNNLSKFVRRSSDISAYFEK FNYISKALCENNR+R WKKLK
Sbjct: 124 AGIIVNDIDGSDKEVSELFNNLSKFVRRSSDISAYFEKYFNYISKALCENNRNRQWKKLK 183

Query: 132 GRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTFLS 173
           GRSLK NYFNTPWAGI IF GTFIIILTLLQTIFS +STFLS
Sbjct: 184 GRSLKHNYFNTPWAGIAIFVGTFIIILTLLQTIFSVISTFLS 225

[Close]
BLAST of CSPI07G06370 vs. NCBI nr
Match: gi|659088834|ref|XP_008445186.1| (PREDICTED: putative UPF0481 protein At3g02645 [Cucumis melo])

HSP 1 Score: 148.3 bits (373), Expect = 1.3e-32
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1 

Query: 72  AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYWKKLKG 131
           AGIIVNDI  S+KEVSELFNNLSKFV RS DISAYFEKFN ISKALCE +RDR W KLK 
Sbjct: 460 AGIIVNDIGGSDKEVSELFNNLSKFVNRSGDISAYFEKFNGISKALCE-HRDRRWNKLKA 519

Query: 132 RSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF 171
            SLK NYFNTPWAGI++FA TFII+LTLLQTIF+ +STF
Sbjct: 520 -SLKHNYFNTPWAGISVFAATFIIVLTLLQTIFAGISTF 556

[Close]
BLAST of CSPI07G06370 vs. NCBI nr
Match: gi|778672484|ref|XP_011649818.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-27
Identity = 70/99 (70.71%), Postives = 81/99 (81.82%), Query Frame = 1 

Query: 72  AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYWKKLKG 131
           AGIIVNDI  S+KEVS+LFNNLSKFV RS + S YF+KF  ISKALCE +RDR W KLK 
Sbjct: 417 AGIIVNDIGGSHKEVSKLFNNLSKFVNRSDNNSEYFKKFQGISKALCE-HRDRRWNKLKA 476

Query: 132 RSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF 171
            SLK NYFNTPWA I++FA T +I+LTLLQTIF+ +STF
Sbjct: 477 -SLKHNYFNTPWASISVFAATLVIVLTLLQTIFAVISTF 513

[Close]
BLAST of CSPI07G06370 vs. NCBI nr
Match: gi|659089575|ref|XP_008445584.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 99.8 bits (247), Expect = 5.1e-18
Identity = 59/103 (57.28%), Postives = 74/103 (71.84%), Query Frame = 1 

Query: 70  VTAGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYWKKL 129
           V +G+I+N+I  S+KEVSELFNNL KFV    +   Y   FN+ISKAL ++   R W K 
Sbjct: 449 VNSGVIINNIGGSDKEVSELFNNLGKFVNHCRN--PYM--FNHISKALRKHCNGR-WNKA 508

Query: 130 KGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTFLS 173
           K  SLK NYFNTPWA I+ FAG+F+++LTLLQTIFS +S F S
Sbjct: 509 KA-SLKHNYFNTPWAFISFFAGSFLLLLTLLQTIFSGISAFPS 545

[Close]
BLAST of CSPI07G06370 vs. NCBI nr
Match: gi|659089573|ref|XP_008445583.1| (PREDICTED: LOW QUALITY PROTEIN: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 99.4 bits (246), Expect = 6.7e-18
Identity = 59/103 (57.28%), Postives = 74/103 (71.84%), Query Frame = 1 

Query: 70  VTAGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYWKKL 129
           V +G+I+N+I  S+KEVSELFNNL KFV +    S Y   FN+ISKAL ++   R W K 
Sbjct: 475 VNSGVIINNIGGSDKEVSELFNNLGKFVNQCP--SPYM--FNHISKALRKHCNGR-WNKA 534

Query: 130 KGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTFLS 173
           K  SLK NYFNTPWA I+ FA +F+++LTLLQTIFS +S F S
Sbjct: 535 KA-SLKHNYFNTPWAFISFFAASFLVLLTLLQTIFSGISAFPS 571

The following BLAST results are available for this feature:
BLAST of CSPI07G06370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G06370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2S5_CUCSA2.3e-4190.20Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068560 PE=4 SV=1[more]
A0A0A0LQ64_CUCSA1.1e-2770.71Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381630 PE=4 SV=1[more]
A0A0A0LQ57_CUCSA4.3e-1651.49Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380610 PE=4 SV=1[more]
A0A0A0LM96_CUCSA5.7e-1654.64Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380080 PE=4 SV=1[more]
A0A0A0LQ49_CUCSA3.1e-1465.22Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380070 PE=4 SV=1[more]
BLAST of CSPI07G06370 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G31980.11.6e-0634.34 unknown protein[more]
BLAST of CSPI07G06370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188570|gb|KGN43803.1|3.3e-4190.20hypothetical protein Csa_7G068560 [Cucumis sativus][more]
gi|659088834|ref|XP_008445186.1|1.3e-3279.80PREDICTED: putative UPF0481 protein At3g02645 [Cucumis melo][more]
gi|778672484|ref|XP_011649818.1|1.6e-2770.71PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus][more]
gi|659089575|ref|XP_008445584.1|5.1e-1857.28PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo][more]
gi|659089573|ref|XP_008445583.1|6.7e-1857.28PREDICTED: LOW QUALITY PROTEIN: UPF0481 protein At3g47200-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004158DUF247_pln
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G06370.1CSPI07G06370.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004158Protein of unknown function DUF247, plantPFAMPF03140DUF247coord: 71..157
score: 5.
NoneNo IPR availablePANTHERPTHR31549FAMILY NOT NAMEDcoord: 72..168
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G06370Csa7G068560Cucumber (Chinese Long) v2cpicuB354
CSPI07G06370CsaV3_7G007340Cucumber (Chinese Long) v3cpicucB415
CSPI07G06370Cucsa.218690Cucumber (Gy14) v1cgycpiB336
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G06370Cucurbita maxima (Rimu)cmacpiB143
CSPI07G06370Cucurbita maxima (Rimu)cmacpiB156
CSPI07G06370Cucurbita maxima (Rimu)cmacpiB534
CSPI07G06370Cucurbita maxima (Rimu)cmacpiB541
CSPI07G06370Cucurbita moschata (Rifu)cmocpiB134
CSPI07G06370Cucurbita moschata (Rifu)cmocpiB136
CSPI07G06370Cucurbita moschata (Rifu)cmocpiB525
CSPI07G06370Cucurbita moschata (Rifu)cmocpiB531
CSPI07G06370Cucurbita moschata (Rifu)cmocpiB777
CSPI07G06370Melon (DHL92) v3.5.1cpimeB538
CSPI07G06370Melon (DHL92) v3.5.1cpimeB557
CSPI07G06370Watermelon (Charleston Gray)cpiwcgB541
CSPI07G06370Watermelon (Charleston Gray)cpiwcgB561
CSPI07G06370Watermelon (Charleston Gray)cpiwcgB576
CSPI07G06370Watermelon (Charleston Gray)cpiwcgB599
CSPI07G06370Watermelon (97103) v1cpiwmB574
CSPI07G06370Watermelon (97103) v1cpiwmB594
CSPI07G06370Watermelon (97103) v1cpiwmB596
CSPI07G06370Cucurbita pepo (Zucchini)cpecpiB258
CSPI07G06370Cucurbita pepo (Zucchini)cpecpiB264
CSPI07G06370Cucurbita pepo (Zucchini)cpecpiB472
CSPI07G06370Cucurbita pepo (Zucchini)cpecpiB696
CSPI07G06370Cucurbita pepo (Zucchini)cpecpiB697
CSPI07G06370Bottle gourd (USVL1VR-Ls)cpilsiB532
CSPI07G06370Bottle gourd (USVL1VR-Ls)cpilsiB534
CSPI07G06370Bottle gourd (USVL1VR-Ls)cpilsiB536
CSPI07G06370Melon (DHL92) v3.6.1cpimedB558
CSPI07G06370Melon (DHL92) v3.6.1cpimedB523
CSPI07G06370Cucumber (Gy14) v2cgybcpiB332
CSPI07G06370Silver-seed gourdcarcpiB0214
CSPI07G06370Silver-seed gourdcarcpiB0322
CSPI07G06370Silver-seed gourdcarcpiB0414
CSPI07G06370Silver-seed gourdcarcpiB0493
CSPI07G06370Silver-seed gourdcarcpiB0766
CSPI07G06370Silver-seed gourdcarcpiB0767
CSPI07G06370Watermelon (97103) v2cpiwmbB542
CSPI07G06370Watermelon (97103) v2cpiwmbB554
CSPI07G06370Watermelon (97103) v2cpiwmbB584
CSPI07G06370Wax gourdcpiwgoB685
CSPI07G06370Wax gourdcpiwgoB659
CSPI07G06370Wax gourdcpiwgoB672