Cucsa.185000 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.185000
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Ring finger protein, putative
Location	scaffold01274 : 620325 .. 621117 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAaTCTCACTATATTACCATTAAAATCCTCAAAATCCCACAAAGAAATTCATCTTTTCCTCTATCTCACTTCTTTCTCCATCTCACTTAAAACAAGAGGCCATGTCCTCCCCCACTAATCCCTCTTTCGACGGCGACGATATATACTTCGGCCCcGCCCATCCCCATCGCAACCCATATGATTTAAACAACAAAATCATGCTCACCGCCATCGTTTCCCTTTCTCTCGTCGTCATTCTCGTCATTGCCCTTCACATTTACGCCCGTTATGCCCTCCGCCGCCACGCACGGCGTCAGGCCGTCCTACGTCGTCTCGGAATCCTCGCCTTCATCGACTCCGGCGACCATCACCCGCCACCGTCTCGCTCCGGGCTCGACCCCTTAGTCATGGCGTCGATGCCGGTCGTCGTTTTCAAGCACCAATCGGAAAGTCCAGACCCCTCCGGTGGCGGCGTGGAGTGTGCCGTGTGCTTGAGCGCTATCGTGGACGGCGAGACGGCGAGAATTTTGCCCAATTGTAAACATGTGTTTCATGTGGAGTGTATTGATAAATGGTTTGGGTCTCATTCCACATGTCCGATTTGTCGGACGGAGGCGGCGCCGATGATGCTGCCAGAACCTCGGGAAGGTCCGGCGGCAGAGGTGGGGGAGGGTGGTGGTGGTGGTGGTGGGTCAACCTCCCGATTGAGTTCGTTCAGACGGATTCTAAGTAGAGAAAGGTCTTCGCTAAGGATTCAACCCTGTGTACTCCAACATAGAAACGACGCCGTTCCAGACTTGGAATCCCAGTAA

mRNA sequence

AAAAATCTCACTATATTACCATTAAAATCCTCAAAATCCCACAAAGAAATTCATCTTTTCCTCTATCTCACTTCTTTCTCCATCTCACTTAAAACAAGAGGCCATGTCCTCCCCCACTAATCCCTCTTTCGACGGCGACGATATATACTTCGGCCCCGCCCATCCCCATCGCAACCCATATGATTTAAACAACAAAATCATGCTCACCGCCATCGTTTCCCTTTCTCTCGTCGTCATTCTCGTCATTGCCCTTCACATTTACGCCCGTTATGCCCTCCGCCGCCACGCACGGCGTCAGGCCGTCCTACGTCGTCTCGGAATCCTCGCCTTCATCGACTCCGGCGACCATCACCCGCCACCGTCTCGCTCCGGGCTCGACCCCTTAGTCATGGCGTCGATGCCGGTCGTCGTTTTCAAGCACCAATCGGAAAGTCCAGACCCCTCCGGTGGCGGCGTGGAGTGTGCCGTGTGCTTGAGCGCTATCGTGGACGGCGAGACGGCGAGAATTTTGCCCAATTGTAAACATGTGTTTCATGTGGAGTGTATTGATAAATGGTTTGGGTCTCATTCCACATGTCCGATTTGTCGGACGGAGGCGGCGCCGATGATGCTGCCAGAACCTCGGGAAGGTCCGGCGGCAGAGGTGGGGGAGggtggtggtggtggtggtggGTCAACCTCCCGATTGAGTTCGTTCAGACGGATTCTAAGTAGAGAAAGGTCTTCGCTAAGGATTCAACCCTGTGTACTCCAACATAGAAACGACGCCGTTCCAGACTTGGAATCCCAGtaa

Coding sequence (CDS)

ATGTCCTCCCCCACTAATCCCTCTTTCGACGGCGACGATATATACTTCGGCCCcGCCCATCCCCATCGCAACCCATATGATTTAAACAACAAAATCATGCTCACCGCCATCGTTTCCCTTTCTCTCGTCGTCATTCTCGTCATTGCCCTTCACATTTACGCCCGTTATGCCCTCCGCCGCCACGCACGGCGTCAGGCCGTCCTACGTCGTCTCGGAATCCTCGCCTTCATCGACTCCGGCGACCATCACCCGCCACCGTCTCGCTCCGGGCTCGACCCCTTAGTCATGGCGTCGATGCCGGTCGTCGTTTTCAAGCACCAATCGGAAAGTCCAGACCCCTCCGGTGGCGGCGTGGAGTGTGCCGTGTGCTTGAGCGCTATCGTGGACGGCGAGACGGCGAGAATTTTGCCCAATTGTAAACATGTGTTTCATGTGGAGTGTATTGATAAATGGTTTGGGTCTCATTCCACATGTCCGATTTGTCGGACGGAGGCGGCGCCGATGATGCTGCCAGAACCTCGGGAAGGTCCGGCGGCAGAGGTGGGGGAGGGTGGTGGTGGTGGTGGTGGGTCAACCTCCCGATTGAGTTCGTTCAGACGGATTCTAAGTAGAGAAAGGTCTTCGCTAAGGATTCAACCCTGTGTACTCCAACATAGAAACGACGCCGTTCCAGACTTGGAATCCCAGTAA

Protein sequence

MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAEVGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ*

Homology

[Close]

BLAST of Cucsa.185000 vs. Swiss-Prot
Match: ATL40_ARATH (RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.5e-37
Identity = 92/218 (42.20%), Postives = 124/218 (56.88%), Query Frame = 1


Query: 3   SPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHA 62
           S  N + D DD  F     +   YD ++KI L   VS S+++I+V   ++YA++ L R +
Sbjct: 2   SSNNKTDDSDDRSFWQ---NSTSYDASSKIFLVTTVSFSIIIIIVFVYYLYAKFVLHRRS 61

Query: 63  RRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAV 122
             Q +     +++         PP R GLD LV+AS+P  V   +++       G ECAV
Sbjct: 62  AFQDL--SFSVVS--------QPPKR-GLDSLVIASLPTFVVGIKNDV-----AGTECAV 121

Query: 123 CLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAA---PMMLPEPREGPAA 182
           CLS + + + AR+LPNCKHVFHV C+D W  + STCP+CRTEA    P + PEPREGP  
Sbjct: 122 CLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPRLEPEPREGPVG 181

Query: 183 E-------VGEGGGGGGGSTSRLSSFRRILSRERSSLR 211
           +        G     GG S SRL SFRRIL+RERSS R
Sbjct: 182 DFAPPLDFAGVDNKTGGSSVSRLDSFRRILTRERSSNR 200

[Close]

BLAST of Cucsa.185000 vs. Swiss-Prot
Match: ATL41_ARATH (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.5e-36
Identity = 103/247 (41.70%), Postives = 133/247 (53.85%), Query Frame = 1


Query: 8   SFDGDDIYFGPAH----PHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHAR 67
           S D D   F   H    P+ + YDLN+KIML A+ SLS V+++V ALH+YAR+ LRR  R
Sbjct: 3   SNDRDHRRFNSDHHSFWPNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLRR--R 62

Query: 68  RQAVLRRLGILAFIDSGDHHP-PPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAV 127
           R+A  R L ++        HP    + GL+P V+AS+P         +   +    ECAV
Sbjct: 63  REA-FRGLPVIF------RHPFEMPKRGLNPTVIASLPTFTV---GATDGVAASATECAV 122

Query: 128 CLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEA--APMMLPEPREGP--- 187
           CLS + + + AR LPNCKH+FHV+C+D W  + STCP+CRTE    P + PEPREGP   
Sbjct: 123 CLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREGPVGT 182

Query: 188 ------------AAEVGEGGGGGG----GSTSRLSSFRRILSRERSSLRI-QPCVLQHRN 228
                         E                SRL+SFR+IL+RERSS RI   C  Q   
Sbjct: 183 APQLLVETRLNLTVEAASSSSSDNKTVVSPASRLNSFRKILTRERSSNRINHSCPDQ--- 234

[Close]

BLAST of Cucsa.185000 vs. Swiss-Prot
Match: ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 3.8e-29
Identity = 76/165 (46.06%), Postives = 100/165 (60.61%), Query Frame = 1


Query: 8   SFDGDDIYFGPAHPH---RNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYAL----RR 67
           S D D I F P   +      Y ++ KIML+AIV L  VVIL++ LH+YAR+ L    RR
Sbjct: 3   SNDQDPIPFRPEDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRR 62

Query: 68  HARRQAVLRRLGILAFI--DSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGV 127
           H RR++  RR  ++ F    S       +  GLDP V+ S+PV  F  ++   DP    +
Sbjct: 63  HLRRRSRNRRATMVFFTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHK-DP----I 122

Query: 128 ECAVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRT 164
           ECAVCLS   + ET R+LPNC+H FHV+CID WF SHSTCP+CR+
Sbjct: 123 ECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRS 162

[Close]

BLAST of Cucsa.185000 vs. Swiss-Prot
Match: ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-25
Identity = 72/194 (37.11%), Postives = 102/194 (52.58%), Query Frame = 1


Query: 9   FDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVL 68
           FD     +G  +   + Y LN KIML +++ L + VIL++  H YAR+  RR  RR  + 
Sbjct: 5   FDSSKTLWGNMNHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRR--IR 64

Query: 69  RRLGILAFIDSGDHHPPPSRSGL---DPLVMASMPVVVFKHQS-ESPDPSGGGVECAVCL 128
           RR+       +    P  S S L   DP V+  +P+ V+  ++ ESP       EC+VCL
Sbjct: 65  RRISAHLRSLAAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLE-----ECSVCL 124

Query: 129 SAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRT---EAAPMMLPEPREG--PAA 188
           S   + +  R+LP C HVFHV+CID WF S S+CP+CR     A P+  PEP     P+ 
Sbjct: 125 SEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSV 184

Query: 189 EVGEGGGGGGGSTS 194
           +  E    G  S+S
Sbjct: 185 KPIEDTEAGSSSSS 191

[Close]

BLAST of Cucsa.185000 vs. Swiss-Prot
Match: ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-23
Identity = 58/142 (40.85%), Postives = 81/142 (57.04%), Query Frame = 1


Query: 26  YDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLRRLGILAFIDSGDHHPP 85
           Y LN KIML++++ L + VI+++  H YAR+  RRH RR  + RR+       S      
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRR--IRRRIRSHLRTLSAS---- 81

Query: 86  PSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAIVDGETARILPNCKHVFHV 145
           P    LD  V+  +P+ V+   S++P P     EC+VCLS   + +  R+LP C H FHV
Sbjct: 82  PRDQALDQAVLDKIPIFVYS--SKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHV 141

Query: 146 ECIDKWFGSHSTCPICRTEAAP 168
           +CID WF S STCP+CR    P
Sbjct: 142 DCIDTWFRSRSTCPLCRAPVQP 155

[Close]

BLAST of Cucsa.185000 vs. TrEMBL
Match: A0A0A0KJL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G420520 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 4.6e-130
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1


Query: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60
           MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR
Sbjct: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60

Query: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120
           HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC
Sbjct: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120

Query: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180
           AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE
Sbjct: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180

Query: 181 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 230
           VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ
Sbjct: 181 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 229

[Close]

BLAST of Cucsa.185000 vs. TrEMBL
Match: G4V490_CUCSA (Putative ring zinc finger protein (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.3e-100
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1


Query: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60
           MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR
Sbjct: 27  MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 86

Query: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120
           HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC
Sbjct: 87  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 146

Query: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAA 180
           AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAA
Sbjct: 147 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAA 205

[Close]

BLAST of Cucsa.185000 vs. TrEMBL
Match: B9SGM1_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0554190 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.0e-52
Identity = 125/241 (51.87%), Postives = 146/241 (60.58%), Query Frame = 1


Query: 10  DGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLR 69
           +G+D    P   HR+ YDLN+KIML AI SLS VV+LVI LHIYAR  LRR AR +A +R
Sbjct: 28  EGED---SPLFVHRDTYDLNSKIMLAAITSLSFVVVLVIVLHIYARCVLRRQARERANIR 87

Query: 70  RLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAIVD 129
           RLG+            P ++GLDP+V+AS+P+ V+K  +   D      ECAVCLS + D
Sbjct: 88  RLGLATATSE------PPKTGLDPVVIASLPIFVYKQSNG--DQEDNDQECAVCLSVLQD 147

Query: 130 GETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAEVG------- 189
            E AR LPNCKH FH ECIDKW  SHSTCPICRTEA P + PEPREGP    G       
Sbjct: 148 QEMARSLPNCKHTFHAECIDKWLTSHSTCPICRTEAEPRIQPEPREGPVPAGGAATAPPL 207

Query: 190 -----EGGGGGG---------GSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLES 230
                EG    G         GS SRLSSFRRILSRERSS RIQ    + +   + DLE 
Sbjct: 208 EQVGTEGTSESGNQSSSNKASGSISRLSSFRRILSRERSSRRIQS---ETQEQGLEDLER 254

[Close]

BLAST of Cucsa.185000 vs. TrEMBL
Match: M1AJX0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009405 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.5e-51
Identity = 122/246 (49.59%), Postives = 150/246 (60.98%), Query Frame = 1


Query: 9   FDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVL 68
           FD DD    P    +N YDLN+KIM+TAI+SLS+V+  V  LH+YAR  LRR ARR+A L
Sbjct: 3   FDDDD---PPFFHRKNKYDLNSKIMITAIISLSIVIFFVTLLHVYARCVLRRQARRRAEL 62

Query: 69  RRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAIV 128
           +R+ I   I S      P ++GLDP V+AS+PV + K    + + S   +EC VCLSA+ 
Sbjct: 63  QRISI---ITSSALQVEPPKTGLDPSVIASLPVFILKQNDINQNNS---IECTVCLSALE 122

Query: 129 DGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMML-PEPREG------PAAEV 188
           DGET R LPNCKHVFH ECIDKWFGSHSTCPICRTEA P +L PEPREG      P+A  
Sbjct: 123 DGETVRKLPNCKHVFHTECIDKWFGSHSTCPICRTEAEPRLLQPEPREGVVGPTTPSAPP 182

Query: 189 GEGGGGG------------------GGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAV 230
            EGG                      GS+SRLSSFR+++S E+SS R+           +
Sbjct: 183 IEGGDSTNVEDCGLAQDSTSSSAKINGSSSRLSSFRKMISMEKSSRRLHVQFCGVEEGVI 239

[Close]

BLAST of Cucsa.185000 vs. TrEMBL
Match: A0A022QTZ5_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a024357mg PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.2e-51
Identity = 116/227 (51.10%), Postives = 142/227 (62.56%), Query Frame = 1


Query: 23  RNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLRRLGILAFIDSGDH 82
           ++ YD+N+KIMLTAI+SLS VVILV  LHIYAR+ LRR +RRQA LRRLG +    +   
Sbjct: 15  KSNYDMNSKIMLTAIISLSFVVILVTILHIYARFLLRRQSRRQAELRRLGFITASANIQS 74

Query: 83  HPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGG-------VECAVCLSAIVDGETARI 142
              P ++GLDP VMA++P  +++  S S D             EC+VCLS + DGE AR 
Sbjct: 75  ASEPPKTGLDPAVMAALPHFIYRKTSSSNDDDDDDDDDETSLTECSVCLSILEDGEIART 134

Query: 143 LPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAEVGEGGGGG------- 202
           LPNCKH FH ECIDKWF ++STCPICR +A P ++PEPREG    V   GGG        
Sbjct: 135 LPNCKHTFHAECIDKWFVTNSTCPICRMDAEPRLVPEPREGVVVVVVAAGGGAPPSAPPL 194

Query: 203 ------GGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 230
                   S SRLSSFRRILSRERSS        + +  +VPDLE Q
Sbjct: 195 EGTSDKNSSGSRLSSFRRILSRERSS-----SSRRMQTSSVPDLERQ 236

[Close]

BLAST of Cucsa.185000 vs. TAIR10
Match: AT2G42350.1 (AT2G42350.1 RING/U-box superfamily protein)

HSP 1 Score: 155.6 bits (392), Expect = 3.7e-38
Identity = 92/218 (42.20%), Postives = 124/218 (56.88%), Query Frame = 1


Query: 3   SPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHA 62
           S  N + D DD  F     +   YD ++KI L   VS S+++I+V   ++YA++ L R +
Sbjct: 2   SSNNKTDDSDDRSFWQ---NSTSYDASSKIFLVTTVSFSIIIIIVFVYYLYAKFVLHRRS 61

Query: 63  RRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAV 122
             Q +     +++         PP R GLD LV+AS+P  V   +++       G ECAV
Sbjct: 62  AFQDL--SFSVVS--------QPPKR-GLDSLVIASLPTFVVGIKNDV-----AGTECAV 121

Query: 123 CLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAA---PMMLPEPREGPAA 182
           CLS + + + AR+LPNCKHVFHV C+D W  + STCP+CRTEA    P + PEPREGP  
Sbjct: 122 CLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPRLEPEPREGPVG 181

Query: 183 E-------VGEGGGGGGGSTSRLSSFRRILSRERSSLR 211
           +        G     GG S SRL SFRRIL+RERSS R
Sbjct: 182 DFAPPLDFAGVDNKTGGSSVSRLDSFRRILTRERSSNR 200

[Close]

BLAST of Cucsa.185000 vs. TAIR10
Match: AT2G42360.1 (AT2G42360.1 RING/U-box superfamily protein)

HSP 1 Score: 152.5 bits (384), Expect = 3.1e-37
Identity = 103/247 (41.70%), Postives = 133/247 (53.85%), Query Frame = 1


Query: 8   SFDGDDIYFGPAH----PHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHAR 67
           S D D   F   H    P+ + YDLN+KIML A+ SLS V+++V ALH+YAR+ LRR  R
Sbjct: 3   SNDRDHRRFNSDHHSFWPNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLRR--R 62

Query: 68  RQAVLRRLGILAFIDSGDHHP-PPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAV 127
           R+A  R L ++        HP    + GL+P V+AS+P         +   +    ECAV
Sbjct: 63  REA-FRGLPVIF------RHPFEMPKRGLNPTVIASLPTFTV---GATDGVAASATECAV 122

Query: 128 CLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEA--APMMLPEPREGP--- 187
           CLS + + + AR LPNCKH+FHV+C+D W  + STCP+CRTE    P + PEPREGP   
Sbjct: 123 CLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREGPVGT 182

Query: 188 ------------AAEVGEGGGGGG----GSTSRLSSFRRILSRERSSLRI-QPCVLQHRN 228
                         E                SRL+SFR+IL+RERSS RI   C  Q   
Sbjct: 183 APQLLVETRLNLTVEAASSSSSDNKTVVSPASRLNSFRKILTRERSSNRINHSCPDQ--- 234

[Close]

BLAST of Cucsa.185000 vs. TAIR10
Match: AT3G16720.1 (AT3G16720.1 TOXICOS EN LEVADURA 2)

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-30
Identity = 76/165 (46.06%), Postives = 100/165 (60.61%), Query Frame = 1


Query: 8   SFDGDDIYFGPAHPH---RNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYAL----RR 67
           S D D I F P   +      Y ++ KIML+AIV L  VVIL++ LH+YAR+ L    RR
Sbjct: 3   SNDQDPIPFRPEDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRR 62

Query: 68  HARRQAVLRRLGILAFI--DSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGV 127
           H RR++  RR  ++ F    S       +  GLDP V+ S+PV  F  ++   DP    +
Sbjct: 63  HLRRRSRNRRATMVFFTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHK-DP----I 122

Query: 128 ECAVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRT 164
           ECAVCLS   + ET R+LPNC+H FHV+CID WF SHSTCP+CR+
Sbjct: 123 ECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRS 162

[Close]

BLAST of Cucsa.185000 vs. TAIR10
Match: AT3G62690.1 (AT3G62690.1 AtL5)

HSP 1 Score: 116.3 bits (290), Expect = 2.5e-26
Identity = 72/194 (37.11%), Postives = 102/194 (52.58%), Query Frame = 1


Query: 9   FDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVL 68
           FD     +G  +   + Y LN KIML +++ L + VIL++  H YAR+  RR  RR  + 
Sbjct: 5   FDSSKTLWGNMNHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRR--IR 64

Query: 69  RRLGILAFIDSGDHHPPPSRSGL---DPLVMASMPVVVFKHQS-ESPDPSGGGVECAVCL 128
           RR+       +    P  S S L   DP V+  +P+ V+  ++ ESP       EC+VCL
Sbjct: 65  RRISAHLRSLAAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLE-----ECSVCL 124

Query: 129 SAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRT---EAAPMMLPEPREG--PAA 188
           S   + +  R+LP C HVFHV+CID WF S S+CP+CR     A P+  PEP     P+ 
Sbjct: 125 SEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSV 184

Query: 189 EVGEGGGGGGGSTS 194
           +  E    G  S+S
Sbjct: 185 KPIEDTEAGSSSSS 191

[Close]

BLAST of Cucsa.185000 vs. TAIR10
Match: AT2G47560.1 (AT2G47560.1 RING/U-box superfamily protein)

HSP 1 Score: 111.3 bits (277), Expect = 7.9e-25
Identity = 58/142 (40.85%), Postives = 81/142 (57.04%), Query Frame = 1


Query: 26  YDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLRRLGILAFIDSGDHHPP 85
           Y LN KIML++++ L + VI+++  H YAR+  RRH RR  + RR+       S      
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRR--IRRRIRSHLRTLSAS---- 81

Query: 86  PSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAIVDGETARILPNCKHVFHV 145
           P    LD  V+  +P+ V+   S++P P     EC+VCLS   + +  R+LP C H FHV
Sbjct: 82  PRDQALDQAVLDKIPIFVYS--SKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHV 141

Query: 146 ECIDKWFGSHSTCPICRTEAAP 168
           +CID WF S STCP+CR    P
Sbjct: 142 DCIDTWFRSRSTCPLCRAPVQP 155

[Close]

BLAST of Cucsa.185000 vs. NCBI nr
Match: gi|700192752|gb|KGN47956.1| (hypothetical protein Csa_6G420520 [Cucumis sativus])

HSP 1 Score: 471.9 bits (1213), Expect = 6.6e-130
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1


Query: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60
           MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR
Sbjct: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60

Query: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120
           HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC
Sbjct: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120

Query: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180
           AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE
Sbjct: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180

Query: 181 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 230
           VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ
Sbjct: 181 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 229

[Close]

BLAST of Cucsa.185000 vs. NCBI nr
Match: gi|449444961|ref|XP_004140242.1| (PREDICTED: RING-H2 finger protein ATL40-like, partial [Cucumis sativus])

HSP 1 Score: 471.9 bits (1213), Expect = 6.6e-130
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1


Query: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60
           MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR
Sbjct: 27  MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 86

Query: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120
           HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC
Sbjct: 87  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 146

Query: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180
           AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE
Sbjct: 147 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 206

Query: 181 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 230
           VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ
Sbjct: 207 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 255

[Close]

BLAST of Cucsa.185000 vs. NCBI nr
Match: gi|659097157|ref|XP_008449472.1| (PREDICTED: RING-H2 finger protein ATL40-like [Cucumis melo])

HSP 1 Score: 423.7 bits (1088), Expect = 2.1e-115
Identity = 208/229 (90.83%), Postives = 215/229 (93.89%), Query Frame = 1


Query: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60
           MSS  NPSFD  DIYFGP+HPHRNPYDLNNKIMLTAI+SLSLVV+LVIALHIYARYALRR
Sbjct: 1   MSSSANPSFDDGDIYFGPSHPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60

Query: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120
           HARRQAVLRRLGILA +DS D H PPSRSGLDPLVMASMPVVVFKHQSE+P+PSGG VEC
Sbjct: 61  HARRQAVLRRLGILALVDSSDPHLPPSRSGLDPLVMASMPVVVFKHQSENPEPSGGAVEC 120

Query: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180
           AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE
Sbjct: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180

Query: 181 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 230
           VGE    GGGS+SRLSSFRRILSRERSSLRIQPCV QHRNDAVPDLESQ
Sbjct: 181 VGE---SGGGSSSRLSSFRRILSRERSSLRIQPCVFQHRNDAVPDLESQ 226

[Close]

BLAST of Cucsa.185000 vs. NCBI nr
Match: gi|347817472|gb|AEP25855.1| (putative ring zinc finger protein [Cucumis sativus])

HSP 1 Score: 374.0 bits (959), Expect = 1.9e-100
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1


Query: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60
           MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR
Sbjct: 27  MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 86

Query: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120
           HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC
Sbjct: 87  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 146

Query: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAA 180
           AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAA
Sbjct: 147 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAA 205

[Close]

BLAST of Cucsa.185000 vs. NCBI nr
Match: gi|1009128481|ref|XP_015881256.1| (PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Ziziphus jujuba])

HSP 1 Score: 222.6 bits (566), Expect = 6.9e-55
Identity = 127/238 (53.36%), Postives = 152/238 (63.87%), Query Frame = 1


Query: 18  PAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLRRLGILA-F 77
           P   H+NPYDLN+ IMLTAI+SLS+V++LVIALHIYAR  L+R ARR+A + +LG  A  
Sbjct: 20  PLTDHKNPYDLNHNIMLTAIISLSVVILLVIALHIYARCVLQRQARRRAAIHQLGFTAAH 79

Query: 78  IDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGV--ECAVCLSAIVDGETAR 137
             SG+   PPS+ GL+P V+A +P+ VFK    S D  G     ECAVCL  + D E AR
Sbjct: 80  APSGE---PPSQ-GLEPSVIAMLPMFVFKQVDNSTDDDGNNTTTECAVCLCTLEDEEMAR 139

Query: 138 ILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAA---------EVG--- 197
           +LPNCKH FH EC+DKWFGSHSTCPICRTEA P   PEPREGP            +G   
Sbjct: 140 LLPNCKHTFHAECVDKWFGSHSTCPICRTEAQPRPQPEPREGPVEDSSTTPPLERIGSVS 199

Query: 198 ---EGGGGG--------GGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 230
              EG            GGS+SRL+SFRRILSRERSS R+  C    + D + DLE Q
Sbjct: 200 LCSEGTSDCAAQPSPKIGGSSSRLNSFRRILSRERSSRRVHSC---GQEDGIIDLERQ 250

The following BLAST results are available for this feature:

BLAST of Cucsa.185000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL40_ARATH	6.5e-37	42.20	RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2 SV=1	[more]
ATL41_ARATH	5.5e-36	41.70	E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41 PE=1 SV=1	[more]
ATL2_ARATH	3.8e-29	46.06	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2	[more]
ATL5_ARATH	4.4e-25	37.11	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1	[more]
ATL64_ARATH	1.4e-23	40.85	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1	[more]

BLAST of Cucsa.185000 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJL6_CUCSA	4.6e-130	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G420520 PE=4 SV=1	[more]
G4V490_CUCSA	1.3e-100	100.00	Putative ring zinc finger protein (Fragment) OS=Cucumis sativus PE=2 SV=1	[more]
B9SGM1_RICCO	1.0e-52	51.87	Ring finger protein, putative OS=Ricinus communis GN=RCOM_0554190 PE=4 SV=1	[more]
M1AJX0_SOLTU	2.5e-51	49.59	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009405 PE=4 SV=1	[more]
A0A022QTZ5_ERYGU	3.2e-51	51.10	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a024357mg PE=4 SV=1	[more]

BLAST of Cucsa.185000 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42350.1	3.7e-38	42.20	RING/U-box superfamily protein	[more]
AT2G42360.1	3.1e-37	41.70	RING/U-box superfamily protein	[more]
AT3G16720.1	2.2e-30	46.06	TOXICOS EN LEVADURA 2	[more]
AT3G62690.1	2.5e-26	37.11	AtL5	[more]
AT2G47560.1	7.9e-25	40.85	RING/U-box superfamily protein	[more]

BLAST of Cucsa.185000 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700192752\|gb\|KGN47956.1\|	6.6e-130	100.00	hypothetical protein Csa_6G420520 [Cucumis sativus]	[more]
gi\|449444961\|ref\|XP_004140242.1\|	6.6e-130	100.00	PREDICTED: RING-H2 finger protein ATL40-like, partial [Cucumis sativus]	[more]
gi\|659097157\|ref\|XP_008449472.1\|	2.1e-115	90.83	PREDICTED: RING-H2 finger protein ATL40-like [Cucumis melo]	[more]
gi\|347817472\|gb\|AEP25855.1\|	1.9e-100	100.00	putative ring zinc finger protein [Cucumis sativus]	[more]
gi\|1009128481\|ref\|XP_015881256.1\|	6.9e-55	53.36	PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.185000.1	Cucsa.185000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 119..162 score: 5.9
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 120..161 score: 2.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 120..162 score: 1
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 118..164 score: 2.0
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 27..187 score: 2.3
None	No IPR available	PANTHER	PTHR14155:SF179	SUBFAMILY NOT NAMED	coord: 27..187 score: 2.3
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 99..168 score: 1.08

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.185000	Cla016275	Watermelon (97103) v1	cgywmB351
Cucsa.185000	Csa6G420520	Cucumber (Chinese Long) v2	cgycuB282
Cucsa.185000	MELO3C014427	Melon (DHL92) v3.5.1	cgymeB333
Cucsa.185000	ClCG09G011300	Watermelon (Charleston Gray)	cgywcgB327
Cucsa.185000	CSPI06G22540	Wild cucumber (PI 183967)	cgycpiB292
Cucsa.185000	CmaCh11G019250	Cucurbita maxima (Rimu)	cgycmaB0521
Cucsa.185000	CmoCh11G020060	Cucurbita moschata (Rifu)	cgycmoB0523
Cucsa.185000	Lsi11G016830	Bottle gourd (USVL1VR-Ls)	cgylsiB309
Cucsa.185000	MELO3C014427.2	Melon (DHL92) v3.6.1	cgymedB328
Cucsa.185000	CsaV3_6G037650	Cucumber (Chinese Long) v3	cgycucB297
Cucsa.185000	Cla97C09G174030	Watermelon (97103) v2	cgywmbB339
Cucsa.185000	Carg04634	Silver-seed gourd	carcgyB0453

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.185000	Wax gourd	cgywgoB382
Cucsa.185000	Wax gourd	cgywgoB377
Cucsa.185000	Wax gourd	cgywgoB379
Cucsa.185000	Cucurbita maxima (Rimu)	cgycmaB0522
Cucsa.185000	Cucurbita maxima (Rimu)	cgycmaB0524
Cucsa.185000	Cucurbita maxima (Rimu)	cgycmaB0526
Cucsa.185000	Cucurbita maxima (Rimu)	cgycmaB0529
Cucsa.185000	Cucurbita maxima (Rimu)	cgycmaB0533
Cucsa.185000	Cucurbita moschata (Rifu)	cgycmoB0526
Cucsa.185000	Cucurbita moschata (Rifu)	cgycmoB0528
Cucsa.185000	Cucurbita moschata (Rifu)	cgycmoB0531
Cucsa.185000	Cucurbita moschata (Rifu)	cgycmoB0535
Cucsa.185000	Watermelon (Charleston Gray)	cgywcgB332
Cucsa.185000	Watermelon (97103) v1	cgywmB356
Cucsa.185000	Cucurbita pepo (Zucchini)	cgycpeB0504
Cucsa.185000	Cucurbita pepo (Zucchini)	cgycpeB0509
Cucsa.185000	Cucurbita pepo (Zucchini)	cgycpeB0511
Cucsa.185000	Cucurbita pepo (Zucchini)	cgycpeB0515
Cucsa.185000	Bottle gourd (USVL1VR-Ls)	cgylsiB308
Cucsa.185000	Silver-seed gourd	carcgyB0611
Cucsa.185000	Silver-seed gourd	carcgyB0719
Cucsa.185000	Watermelon (97103) v2	cgywmbB333
Cucsa.185000	Watermelon (97103) v2	cgywmbB341