ClCG09G011300 (gene) Watermelon (Charleston Gray)

Overview
NameClCG09G011300
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRing finger protein, putative
LocationCG_Chr09 : 11184439 .. 11185119 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTCCTCCACTACTCCGTCCTTCGACGACGGCGCAGTCTTTTTCGGCCCCGATCGTCCTCACCGGAACCCATATGATTTAAACAACAAAATTATGCTCACCGCCATAATTTCCCTTTCTCTCGTCGTTCTTCTTGTCATTGCCCTTCACATTTACGCTCGTTACGCCCTCCGCCGCCACGCACGGCGGCAGGCCGTCCTCCGCCGCCTCGGAATCCTCGCCCTCGTCGACTCTGGCGACCCTCCTCCGCCGCCTTCCCGGTCCGGGCTCGACCCCTTGGTCATGGCGTCGCTGCCGGTCGTCGTTTTCAAGCACCAATCGGAAAATCCAGGCCCTTCCGGCGCCGCCGTGGAGTGTGCCGTGTGCTTAAGCGCTATCGAGGACGGCGAGACGGCGAGAATATTGCCCAATTGTAAACACGTTTTCCATTTGGAGTGTATTGATAAATGGTTTGGGTCGCATTCCACGTGTCCGATTTGTCGGACGGAGGCGGCGCCGATGATCGTGCCGGAACCTCGGGAGGCTCCGGCGGCAGCGGTGGCGGAGGGCAGCGGTGGGTCAAGCTCCCGATTGAGTTCGTTCAGAAGGATTCTAAGTAGAGAAAGGTCTTCGCGAAGGATTCAACCTTGCGTACGCCAAAGTAGAAACGACGACGTTCAAGACTTGGAAACCCAGTAA

mRNA sequence

ATGTCCTCCTCCACTACTCCGTCCTTCGACGACGGCGCAGTCTTTTTCGGCCCCGATCGTCCTCACCGGAACCCATATGATTTAAACAACAAAATTATGCTCACCGCCATAATTTCCCTTTCTCTCGTCGTTCTTCTTGTCATTGCCCTTCACATTTACGCTCGTTACGCCCTCCGCCGCCACGCACGGCGGCAGGCCGTCCTCCGCCGCCTCGGAATCCTCGCCCTCGTCGACTCTGGCGACCCTCCTCCGCCGCCTTCCCGGTCCGGGCTCGACCCCTTGGTCATGGCGTCGCTGCCGGTCGTCGTTTTCAAGCACCAATCGGAAAATCCAGGCCCTTCCGGCGCCGCCGTGGAGTGTGCCGTGTGCTTAAGCGCTATCGAGGACGGCGAGACGGCGAGAATATTGCCCAATTGTAAACACGTTTTCCATTTGGAGTGTATTGATAAATGGTTTGGGTCGCATTCCACGTGTCCGATTTGTCGGACGGAGGCGGCGCCGATGATCGTGCCGGAACCTCGGGAGGCTCCGGCGGCAGCGGTGGCGGAGGGCAGCGGTGGGTCAAGCTCCCGATTGAGTTCGTTCAGAAGGATTCTAAGTAGAGAAAGGTCTTCGCGAAGGATTCAACCTTGCGTACGCCAAAGTAGAAACGACGACGTTCAAGACTTGGAAACCCAGTAA

Coding sequence (CDS)

ATGTCCTCCTCCACTACTCCGTCCTTCGACGACGGCGCAGTCTTTTTCGGCCCCGATCGTCCTCACCGGAACCCATATGATTTAAACAACAAAATTATGCTCACCGCCATAATTTCCCTTTCTCTCGTCGTTCTTCTTGTCATTGCCCTTCACATTTACGCTCGTTACGCCCTCCGCCGCCACGCACGGCGGCAGGCCGTCCTCCGCCGCCTCGGAATCCTCGCCCTCGTCGACTCTGGCGACCCTCCTCCGCCGCCTTCCCGGTCCGGGCTCGACCCCTTGGTCATGGCGTCGCTGCCGGTCGTCGTTTTCAAGCACCAATCGGAAAATCCAGGCCCTTCCGGCGCCGCCGTGGAGTGTGCCGTGTGCTTAAGCGCTATCGAGGACGGCGAGACGGCGAGAATATTGCCCAATTGTAAACACGTTTTCCATTTGGAGTGTATTGATAAATGGTTTGGGTCGCATTCCACGTGTCCGATTTGTCGGACGGAGGCGGCGCCGATGATCGTGCCGGAACCTCGGGAGGCTCCGGCGGCAGCGGTGGCGGAGGGCAGCGGTGGGTCAAGCTCCCGATTGAGTTCGTTCAGAAGGATTCTAAGTAGAGAAAGGTCTTCGCGAAGGATTCAACCTTGCGTACGCCAAAGTAGAAACGACGACGTTCAAGACTTGGAAACCCAGTAA

Protein sequence

MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAAVAEGSGGSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ
Homology
[Close]
BLAST of ClCG09G011300 vs. Swiss-Prot
Match: ATL41_ARATH (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.6e-38
Identity = 101/226 (44.69%), Postives = 130/226 (57.52%), Query Frame = 1 

Query: 21  PHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQAVLRRLGILALVDSG 80
           P+ + YDLN+KIML A+ SLS V+L+V ALH+YAR+ LRR  RR+A  R L ++      
Sbjct: 20  PNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLRR--RREA-FRGLPVIFR---- 79

Query: 81  DPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLSAIEDGETARILPNCK 140
            P   P R GL+P V+ASLP           G + +A ECAVCLS +++ + AR LPNCK
Sbjct: 80  HPFEMPKR-GLNPTVIASLPTFTV---GATDGVAASATECAVCLSVLKEQDKARELPNCK 139

Query: 141 HVFHLECIDKWFGSHSTCPICRTEA--APMIVPEPREAPAA-------------AVAEGS 200
           H+FH++C+D W  + STCP+CRTE    P + PEPRE P                V   S
Sbjct: 140 HIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREGPVGTAPQLLVETRLNLTVEAAS 199

Query: 201 GGSS---------SRLSSFRRILSRERSSRRI-QPCVRQSRNDDVQ 222
             SS         SRL+SFR+IL+RERSS RI   C  Q R  D++
Sbjct: 200 SSSSDNKTVVSPASRLNSFRKILTRERSSNRINHSCPDQDRVADLE 234

[Close]
BLAST of ClCG09G011300 vs. Swiss-Prot
Match: ATL40_ARATH (RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.2e-36
Identity = 95/235 (40.43%), Postives = 128/235 (54.47%), Query Frame = 1 

Query: 1   MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60
           MSS+      D   F+     +   YD ++KI L   +S S+++++V   ++YA++ L R
Sbjct: 1   MSSNNKTDDSDDRSFW----QNSTSYDASSKIFLVTTVSFSIIIIIVFVYYLYAKFVLHR 60

Query: 61  HARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVEC 120
            +  Q +           S      P + GLD LV+ASLP  V   +++  G      EC
Sbjct: 61  RSAFQDL-----------SFSVVSQPPKRGLDSLVIASLPTFVVGIKNDVAG-----TEC 120

Query: 121 AVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAA---PMIVPEPREAP 180
           AVCLS +E+ + AR+LPNCKHVFH+ C+D W  + STCP+CRTEA    P + PEPRE P
Sbjct: 121 AVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPRLEPEPREGP 180

Query: 181 A---------AAVAEGSGGSS-SRLSSFRRILSRERSS-RRIQPCVRQSRNDDVQ 222
                     A V   +GGSS SRL SFRRIL+RERSS RR    V Q R  D++
Sbjct: 181 VGDFAPPLDFAGVDNKTGGSSVSRLDSFRRILTRERSSNRRDHSRVDQDRELDIE 215

[Close]
BLAST of ClCG09G011300 vs. Swiss-Prot
Match: ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 6.4e-29
Identity = 71/160 (44.38%), Postives = 95/160 (59.38%), Query Frame = 1 

Query: 18  PDRPHRN------PYDLNNKIMLTAIISLSLVVLLVIALHIYARYAL----RRHARRQAV 77
           P RP  N       Y ++ KIML+AI+ L  VV+L++ LH+YAR+ L    RRH RR++ 
Sbjct: 10  PFRPEDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSR 69

Query: 78  LRRLGILALVDSGDPPPPPSR----SGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVC 137
            RR  ++    + DP    +      GLDP V+ SLPV  F  ++         +ECAVC
Sbjct: 70  NRRATMVFF--TADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKD-----PIECAVC 129

Query: 138 LSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRT 164
           LS  E+ ET R+LPNC+H FH++CID WF SHSTCP+CR+
Sbjct: 130 LSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRS 162

[Close]
BLAST of ClCG09G011300 vs. Swiss-Prot
Match: ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.8e-27
Identity = 75/199 (37.69%), Postives = 103/199 (51.76%), Query Frame = 1 

Query: 9   FDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQAVL 68
           FD     +G      + Y LN KIML ++I L + V+L++  H YAR+  RR  RR  + 
Sbjct: 5   FDSSKTLWGNMNHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRR--IR 64

Query: 69  RRLG--ILALVDSGDPPPPPSR-SGLDPLVMASLPVVVFKHQS-ENPGPSGAAVECAVCL 128
           RR+   + +L  + DP    S  S LDP V+  +P+ V+  ++ E+P       EC+VCL
Sbjct: 65  RRISAHLRSLAAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESP-----LEECSVCL 124

Query: 129 SAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRT---EAAPMIVPEPREA----- 188
           S  E+ +  R+LP C HVFH++CID WF S S+CP+CR     A P+  PEP  A     
Sbjct: 125 SEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSV 184

Query: 189 -PAAAVAEGSGGSSSRLSS 195
            P      GS  SS    S
Sbjct: 185 KPIEDTEAGSSSSSDESES 196

[Close]
BLAST of ClCG09G011300 vs. Swiss-Prot
Match: ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.0e-26
Identity = 66/168 (39.29%), Postives = 89/168 (52.98%), Query Frame = 1 

Query: 26  YDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQAVLRRLGILALVDSGDPPPP 85
           Y LN KIML+++I L + V++++  H YAR+  RRH RR     R  +  L  S      
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSAS------ 81

Query: 86  PSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLSAIEDGETARILPNCKHVFHL 145
           P    LD  V+  +P+ V+   S+NP P     EC+VCLS  E+ +  R+LP C H FH+
Sbjct: 82  PRDQALDQAVLDKIPIFVYS--SKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHV 141

Query: 146 ECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAAVAEGSGGSSSRLS 194
           +CID WF S STCP+CR          P + P   +  GS  SSS L+
Sbjct: 142 DCIDTWFRSRSTCPLCRA---------PVQPPFQVIETGSSSSSSPLT 172

[Close]
BLAST of ClCG09G011300 vs. TrEMBL
Match: A0A0A0KJL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G420520 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 4.2e-104
Identity = 191/229 (83.41%), Postives = 203/229 (88.65%), Query Frame = 1 

Query: 1   MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60
           MSS T PSFD   ++FGP  PHRNPYDLNNKIMLTAI+SLSLVV+LVIALHIYARYALRR
Sbjct: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60

Query: 61  HARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVEC 120
           HARRQAVLRRLGILA +DSGD  PPPSRSGLDPLVMAS+PVVVFKHQSE+P PSG  VEC
Sbjct: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120

Query: 121 AVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAA 180
           AVCLSAI DGETARILPNCKHVFH+ECIDKWFGSHSTCPICRTEAAPM++PEPRE PAA 
Sbjct: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180

Query: 181 VAE---GSGGSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
           V E   G GGS+SRLSSFRRILSRERSS RIQPCV Q RND V DLE+Q
Sbjct: 181 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 229

[Close]
BLAST of ClCG09G011300 vs. TrEMBL
Match: G4V490_CUCSA (Putative ring zinc finger protein (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.6e-85
Identity = 154/179 (86.03%), Postives = 164/179 (91.62%), Query Frame = 1 

Query: 1   MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60
           MSS T PSFD   ++FGP  PHRNPYDLNNKIMLTAI+SLSLVV+LVIALHIYARYALRR
Sbjct: 27  MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 86

Query: 61  HARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVEC 120
           HARRQAVLRRLGILA +DSGD  PPPSRSGLDPLVMAS+PVVVFKHQSE+P PSG  VEC
Sbjct: 87  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 146

Query: 121 AVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAA 180
           AVCLSAI DGETARILPNCKHVFH+ECIDKWFGSHSTCPICRTEAAPM++PEPRE PAA
Sbjct: 147 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAA 205

[Close]
BLAST of ClCG09G011300 vs. TrEMBL
Match: A0A061DQ59_THECC (Ring finger protein, putative OS=Theobroma cacao GN=TCM_003637 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.6e-53
Identity = 127/254 (50.00%), Postives = 146/254 (57.48%), Query Frame = 1 

Query: 18  PDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARR--QAVLRRLGILA 77
           P  PHRN YDLN+KIMLTAIISLS+VVLLVI LHIYAR  LRR  RR  QA L R+    
Sbjct: 8   PIPPHRNVYDLNSKIMLTAIISLSVVVLLVIMLHIYARCVLRRQVRRRRQAFLGRIRSTG 67

Query: 78  LVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPG----PSGAAVECAVCLSAIEDGE 137
           L  SG+PP    ++GLDP+V+ SLP+ VFK  S++ G        + ECAVCLS +ED E
Sbjct: 68  LTTSGEPP----KTGLDPMVINSLPIFVFKQTSDDVGYYHDDDDMSTECAVCLSTLEDEE 127

Query: 138 TARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAAVAEGSGG---- 197
            AR LPNCKH FH ECIDKW  S STCPICR E  P + PE RE PA A+ + +      
Sbjct: 128 MARFLPNCKHTFHAECIDKWLASQSTCPICRMEVEPRLQPEAREGPAIAIVDSAAADAPP 187

Query: 198 -----------------------------------SSSRLSSFRRILSRERSSRRIQPCV 227
                                              SSSRLSSFRR+LSRERS RR   C 
Sbjct: 188 TAQSQSLERVNSTGHCMEGTSDAGIQLSSTKVINCSSSRLSSFRRMLSRERSMRRGPSC- 247

[Close]
BLAST of ClCG09G011300 vs. TrEMBL
Match: B9SGM1_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0554190 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.6e-53
Identity = 127/237 (53.59%), Postives = 150/237 (63.29%), Query Frame = 1 

Query: 17  GPDRP---HRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQAVLRRLGI 76
           G D P   HR+ YDLN+KIML AI SLS VV+LVI LHIYAR  LRR AR +A +RRLG+
Sbjct: 29  GEDSPLFVHRDTYDLNSKIMLAAITSLSFVVVLVIVLHIYARCVLRRQARERANIRRLGL 88

Query: 77  LALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLSAIEDGETA 136
                       P ++GLDP+V+ASLP+ V+K  + +   +    ECAVCLS ++D E A
Sbjct: 89  ATATSE------PPKTGLDPVVIASLPIFVYKQSNGDQEDNDQ--ECAVCLSVLQDQEMA 148

Query: 137 RILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAP----AAAVA------- 196
           R LPNCKH FH ECIDKW  SHSTCPICRTEA P I PEPRE P     AA A       
Sbjct: 149 RSLPNCKHTFHAECIDKWLTSHSTCPICRTEAEPRIQPEPREGPVPAGGAATAPPLEQVG 208

Query: 197 -EG------------SGGSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
            EG            + GS SRLSSFRRILSRERSSRRIQ    +++   ++DLE Q
Sbjct: 209 TEGTSESGNQSSSNKASGSISRLSSFRRILSRERSSRRIQ---SETQEQGLEDLERQ 254

[Close]
BLAST of ClCG09G011300 vs. TrEMBL
Match: B9IQQ8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s12120g PE=4 SV=2)

HSP 1 Score: 214.5 bits (545), Expect = 1.3e-52
Identity = 129/225 (57.33%), Postives = 148/225 (65.78%), Query Frame = 1 

Query: 33  MLTAIISLSLVVLLVIALHIYARYALRRH-ARRQAVLRRLGIL-ALVDSGDPPPPPSRSG 92
           MLTAI+SLS VV+LVI LHIYAR ALRRH ARR+AV+  LG+  A V+SG+PP    + G
Sbjct: 1   MLTAILSLSFVVVLVIVLHIYARCALRRHQARRRAVMNSLGLTNASVNSGEPP----KRG 60

Query: 93  LDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLSAIEDGETARILPNCKHVFHLECIDK 152
           LDP V+ASLP+ V++ Q+E        +ECAVCLS +ED E ARILPNCKH FH ECIDK
Sbjct: 61  LDPTVIASLPIFVYQ-QTEGQAEDDL-IECAVCLSMLEDQEMARILPNCKHKFHAECIDK 120

Query: 153 WFGSHSTCPICRTEAAPMIVPEPREAPAAAVA----------------EGSG-------- 212
           W  SHSTCPICRTEA PMI PEPRE PA   A                EG+         
Sbjct: 121 WLSSHSTCPICRTEAEPMIQPEPREGPAGGTAHTAPMLEPMNSTSVCDEGTSSSVGGNQP 180

Query: 213 -----GSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
                GS SRLSSFRR+LSRERSSRRIQP V+    +  QDLE Q
Sbjct: 181 SPKVVGSGSRLSSFRRMLSRERSSRRIQPEVQD--QEGFQDLERQ 217

[Close]
BLAST of ClCG09G011300 vs. TAIR10
Match: AT2G42360.1 (AT2G42360.1 RING/U-box superfamily protein)

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-39
Identity = 101/226 (44.69%), Postives = 130/226 (57.52%), Query Frame = 1 

Query: 21  PHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQAVLRRLGILALVDSG 80
           P+ + YDLN+KIML A+ SLS V+L+V ALH+YAR+ LRR  RR+A  R L ++      
Sbjct: 20  PNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLRR--RREA-FRGLPVIFR---- 79

Query: 81  DPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLSAIEDGETARILPNCK 140
            P   P R GL+P V+ASLP           G + +A ECAVCLS +++ + AR LPNCK
Sbjct: 80  HPFEMPKR-GLNPTVIASLPTFTV---GATDGVAASATECAVCLSVLKEQDKARELPNCK 139

Query: 141 HVFHLECIDKWFGSHSTCPICRTEA--APMIVPEPREAPAA-------------AVAEGS 200
           H+FH++C+D W  + STCP+CRTE    P + PEPRE P                V   S
Sbjct: 140 HIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREGPVGTAPQLLVETRLNLTVEAAS 199

Query: 201 GGSS---------SRLSSFRRILSRERSSRRI-QPCVRQSRNDDVQ 222
             SS         SRL+SFR+IL+RERSS RI   C  Q R  D++
Sbjct: 200 SSSSDNKTVVSPASRLNSFRKILTRERSSNRINHSCPDQDRVADLE 234

[Close]
BLAST of ClCG09G011300 vs. TAIR10
Match: AT2G42350.1 (AT2G42350.1 RING/U-box superfamily protein)

HSP 1 Score: 153.3 bits (386), Expect = 1.8e-37
Identity = 95/235 (40.43%), Postives = 128/235 (54.47%), Query Frame = 1 

Query: 1   MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60
           MSS+      D   F+     +   YD ++KI L   +S S+++++V   ++YA++ L R
Sbjct: 1   MSSNNKTDDSDDRSFW----QNSTSYDASSKIFLVTTVSFSIIIIIVFVYYLYAKFVLHR 60

Query: 61  HARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVEC 120
            +  Q +           S      P + GLD LV+ASLP  V   +++  G      EC
Sbjct: 61  RSAFQDL-----------SFSVVSQPPKRGLDSLVIASLPTFVVGIKNDVAG-----TEC 120

Query: 121 AVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAA---PMIVPEPREAP 180
           AVCLS +E+ + AR+LPNCKHVFH+ C+D W  + STCP+CRTEA    P + PEPRE P
Sbjct: 121 AVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPRLEPEPREGP 180

Query: 181 A---------AAVAEGSGGSS-SRLSSFRRILSRERSS-RRIQPCVRQSRNDDVQ 222
                     A V   +GGSS SRL SFRRIL+RERSS RR    V Q R  D++
Sbjct: 181 VGDFAPPLDFAGVDNKTGGSSVSRLDSFRRILTRERSSNRRDHSRVDQDRELDIE 215

[Close]
BLAST of ClCG09G011300 vs. TAIR10
Match: AT3G16720.1 (AT3G16720.1 TOXICOS EN LEVADURA 2)

HSP 1 Score: 129.0 bits (323), Expect = 3.6e-30
Identity = 71/160 (44.38%), Postives = 95/160 (59.38%), Query Frame = 1 

Query: 18  PDRPHRN------PYDLNNKIMLTAIISLSLVVLLVIALHIYARYAL----RRHARRQAV 77
           P RP  N       Y ++ KIML+AI+ L  VV+L++ LH+YAR+ L    RRH RR++ 
Sbjct: 10  PFRPEDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSR 69

Query: 78  LRRLGILALVDSGDPPPPPSR----SGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVC 137
            RR  ++    + DP    +      GLDP V+ SLPV  F  ++         +ECAVC
Sbjct: 70  NRRATMVFF--TADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKD-----PIECAVC 129

Query: 138 LSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRT 164
           LS  E+ ET R+LPNC+H FH++CID WF SHSTCP+CR+
Sbjct: 130 LSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRS 162

[Close]
BLAST of ClCG09G011300 vs. TAIR10
Match: AT3G62690.1 (AT3G62690.1 AtL5)

HSP 1 Score: 122.1 bits (305), Expect = 4.4e-28
Identity = 75/199 (37.69%), Postives = 103/199 (51.76%), Query Frame = 1 

Query: 9   FDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQAVL 68
           FD     +G      + Y LN KIML ++I L + V+L++  H YAR+  RR  RR  + 
Sbjct: 5   FDSSKTLWGNMNHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRR--IR 64

Query: 69  RRLG--ILALVDSGDPPPPPSR-SGLDPLVMASLPVVVFKHQS-ENPGPSGAAVECAVCL 128
           RR+   + +L  + DP    S  S LDP V+  +P+ V+  ++ E+P       EC+VCL
Sbjct: 65  RRISAHLRSLAAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESP-----LEECSVCL 124

Query: 129 SAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRT---EAAPMIVPEPREA----- 188
           S  E+ +  R+LP C HVFH++CID WF S S+CP+CR     A P+  PEP  A     
Sbjct: 125 SEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSV 184

Query: 189 -PAAAVAEGSGGSSSRLSS 195
            P      GS  SS    S
Sbjct: 185 KPIEDTEAGSSSSSDESES 196

[Close]
BLAST of ClCG09G011300 vs. TAIR10
Match: AT2G47560.1 (AT2G47560.1 RING/U-box superfamily protein)

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-27
Identity = 66/168 (39.29%), Postives = 89/168 (52.98%), Query Frame = 1 

Query: 26  YDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQAVLRRLGILALVDSGDPPPP 85
           Y LN KIML+++I L + V++++  H YAR+  RRH RR     R  +  L  S      
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSAS------ 81

Query: 86  PSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLSAIEDGETARILPNCKHVFHL 145
           P    LD  V+  +P+ V+   S+NP P     EC+VCLS  E+ +  R+LP C H FH+
Sbjct: 82  PRDQALDQAVLDKIPIFVYS--SKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHV 141

Query: 146 ECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAAVAEGSGGSSSRLS 194
           +CID WF S STCP+CR          P + P   +  GS  SSS L+
Sbjct: 142 DCIDTWFRSRSTCPLCRA---------PVQPPFQVIETGSSSSSSPLT 172

[Close]
BLAST of ClCG09G011300 vs. NCBI nr
Match: gi|659097157|ref|XP_008449472.1| (PREDICTED: RING-H2 finger protein ATL40-like [Cucumis melo])

HSP 1 Score: 399.1 bits (1024), Expect = 5.3e-108
Identity = 198/226 (87.61%), Postives = 205/226 (90.71%), Query Frame = 1 

Query: 1   MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60
           MSSS  PSFDDG ++FGP  PHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR
Sbjct: 1   MSSSANPSFDDGDIYFGPSHPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60

Query: 61  HARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVEC 120
           HARRQAVLRRLGILALVDS DP  PPSRSGLDPLVMAS+PVVVFKHQSENP PSG AVEC
Sbjct: 61  HARRQAVLRRLGILALVDSSDPHLPPSRSGLDPLVMASMPVVVFKHQSENPEPSGGAVEC 120

Query: 121 AVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAA 180
           AVCLSAI DGETARILPNCKHVFH+ECIDKWFGSHSTCPICRTEAAPM++PEPRE PAA 
Sbjct: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180

Query: 181 VAEGSGGSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
           V E  GGSSSRLSSFRRILSRERSS RIQPCV Q RND V DLE+Q
Sbjct: 181 VGESGGGSSSRLSSFRRILSRERSSLRIQPCVFQHRNDAVPDLESQ 226

[Close]
BLAST of ClCG09G011300 vs. NCBI nr
Match: gi|700192752|gb|KGN47956.1| (hypothetical protein Csa_6G420520 [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 6.1e-104
Identity = 191/229 (83.41%), Postives = 203/229 (88.65%), Query Frame = 1 

Query: 1   MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60
           MSS T PSFD   ++FGP  PHRNPYDLNNKIMLTAI+SLSLVV+LVIALHIYARYALRR
Sbjct: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60

Query: 61  HARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVEC 120
           HARRQAVLRRLGILA +DSGD  PPPSRSGLDPLVMAS+PVVVFKHQSE+P PSG  VEC
Sbjct: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120

Query: 121 AVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAA 180
           AVCLSAI DGETARILPNCKHVFH+ECIDKWFGSHSTCPICRTEAAPM++PEPRE PAA 
Sbjct: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180

Query: 181 VAE---GSGGSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
           V E   G GGS+SRLSSFRRILSRERSS RIQPCV Q RND V DLE+Q
Sbjct: 181 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 229

[Close]
BLAST of ClCG09G011300 vs. NCBI nr
Match: gi|449444961|ref|XP_004140242.1| (PREDICTED: RING-H2 finger protein ATL40-like, partial [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 6.1e-104
Identity = 191/229 (83.41%), Postives = 203/229 (88.65%), Query Frame = 1 

Query: 1   MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60
           MSS T PSFD   ++FGP  PHRNPYDLNNKIMLTAI+SLSLVV+LVIALHIYARYALRR
Sbjct: 27  MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 86

Query: 61  HARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVEC 120
           HARRQAVLRRLGILA +DSGD  PPPSRSGLDPLVMAS+PVVVFKHQSE+P PSG  VEC
Sbjct: 87  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 146

Query: 121 AVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAA 180
           AVCLSAI DGETARILPNCKHVFH+ECIDKWFGSHSTCPICRTEAAPM++PEPRE PAA 
Sbjct: 147 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 206

Query: 181 VAE---GSGGSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
           V E   G GGS+SRLSSFRRILSRERSS RIQPCV Q RND V DLE+Q
Sbjct: 207 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 255

[Close]
BLAST of ClCG09G011300 vs. NCBI nr
Match: gi|347817472|gb|AEP25855.1| (putative ring zinc finger protein [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 3.7e-85
Identity = 154/179 (86.03%), Postives = 164/179 (91.62%), Query Frame = 1 

Query: 1   MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60
           MSS T PSFD   ++FGP  PHRNPYDLNNKIMLTAI+SLSLVV+LVIALHIYARYALRR
Sbjct: 27  MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 86

Query: 61  HARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVEC 120
           HARRQAVLRRLGILA +DSGD  PPPSRSGLDPLVMAS+PVVVFKHQSE+P PSG  VEC
Sbjct: 87  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 146

Query: 121 AVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAA 180
           AVCLSAI DGETARILPNCKHVFH+ECIDKWFGSHSTCPICRTEAAPM++PEPRE PAA
Sbjct: 147 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAA 205

[Close]
BLAST of ClCG09G011300 vs. NCBI nr
Match: gi|743917385|ref|XP_011002676.1| (PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Populus euphratica])

HSP 1 Score: 228.8 bits (582), Expect = 9.5e-57
Identity = 136/236 (57.63%), Postives = 156/236 (66.10%), Query Frame = 1 

Query: 22  HRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRH-ARRQAVLRRLGIL-ALVDS 81
           H   YDLN+KIMLTAI+SLS VV+LVI LHIYAR ALRRH ARR+AV+  LG+  A V+S
Sbjct: 29  HSTNYDLNSKIMLTAILSLSFVVVLVIVLHIYARCALRRHQARRRAVMNSLGLTNANVNS 88

Query: 82  GDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLSAIEDGETARILPNC 141
           G+PP    + GLDP V+ASLP+ V++ Q+E        +ECAVCLS +ED E ARILPNC
Sbjct: 89  GEPP----KRGLDPTVIASLPIFVYQ-QTEGQAEDDL-IECAVCLSMLEDQEMARILPNC 148

Query: 142 KHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAAVA----------------E 201
           KH FH ECIDKW  SHSTCPICRTEA PMI PEPRE PA   A                E
Sbjct: 149 KHKFHAECIDKWLSSHSTCPICRTEAEPMIQPEPREGPAGGTAHTDPMLEPMNSTSVCDE 208

Query: 202 GSG-------------GSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
           G+              GS SRLSSFRR+LSRERSSRRIQP V+    +  QDLE Q
Sbjct: 209 GTSSSVGGNQPSPKVVGSGSRLSSFRRMLSRERSSRRIQPEVQD--QEGFQDLERQ 256

The following BLAST results are available for this feature:
BLAST of ClCG09G011300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL41_ARATH2.6e-3844.69E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41 PE=1 SV=1[more]
ATL40_ARATH3.2e-3640.43RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2 SV=1[more]
ATL2_ARATH6.4e-2944.38RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2[more]
ATL5_ARATH7.8e-2737.69RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1[more]
ATL64_ARATH3.0e-2639.29RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1[more]
BLAST of ClCG09G011300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJL6_CUCSA4.2e-10483.41Uncharacterized protein OS=Cucumis sativus GN=Csa_6G420520 PE=4 SV=1[more]
G4V490_CUCSA2.6e-8586.03Putative ring zinc finger protein (Fragment) OS=Cucumis sativus PE=2 SV=1[more]
A0A061DQ59_THECC7.6e-5350.00Ring finger protein, putative OS=Theobroma cacao GN=TCM_003637 PE=4 SV=1[more]
B9SGM1_RICCO7.6e-5353.59Ring finger protein, putative OS=Ricinus communis GN=RCOM_0554190 PE=4 SV=1[more]
B9IQQ8_POPTR1.3e-5257.33Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s12120g PE=4 SV=2[more]
BLAST of ClCG09G011300 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G42360.11.5e-3944.69 RING/U-box superfamily protein[more]
AT2G42350.11.8e-3740.43 RING/U-box superfamily protein[more]
AT3G16720.13.6e-3044.38 TOXICOS EN LEVADURA 2[more]
AT3G62690.14.4e-2837.69 AtL5[more]
AT2G47560.11.7e-2739.29 RING/U-box superfamily protein[more]
BLAST of ClCG09G011300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659097157|ref|XP_008449472.1|5.3e-10887.61PREDICTED: RING-H2 finger protein ATL40-like [Cucumis melo][more]
gi|700192752|gb|KGN47956.1|6.1e-10483.41hypothetical protein Csa_6G420520 [Cucumis sativus][more]
gi|449444961|ref|XP_004140242.1|6.1e-10483.41PREDICTED: RING-H2 finger protein ATL40-like, partial [Cucumis sativus][more]
gi|347817472|gb|AEP25855.1|3.7e-8586.03putative ring zinc finger protein [Cucumis sativus][more]
gi|743917385|ref|XP_011002676.1|9.5e-5757.63PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G011300.1ClCG09G011300.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 119..162
score: 4.8
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 120..161
score: 8.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 120..162
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 118..164
score: 1.1
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 27..187
score: 1.2
NoneNo IPR availablePANTHERPTHR14155:SF179SUBFAMILY NOT NAMEDcoord: 27..187
score: 1.2
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 105..168
score: 8.08