Csa6G420520 (gene) Cucumber (Chinese Long) v2

NameCsa6G420520
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRing finger protein, putative; contains IPR013083 (Zinc finger, RING/FYVE/PHD-type)
LocationChr6 : 19362143 .. 19363106 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCTTTTCTTATTTCTTCACCAAGAAATTTCATATCCTTTTTTAATAATCTTCTCTTTCACACACCAATCATCAAAATTCAAAACCCAAACTTCATACATACTTTCCTTTTCCAATTCTTTGTTAAAAAAAATCTCACTATATTACCATTAAAATCCTCAAAATCCCACAAAGAAATTCATCTTTTCCTCTATCTCACTTCTTTCTCCATCTCACTTAAAACAAGAGGCCATGTCCTCCCCCACTAATCCCTCTTTCGACGGCGACGATATATACTTCGGCCCCGCCCATCCCCATCGCAACCCATATGATTTAAACAACAAAATCATGCTCACCGCCATCGTTTCCCTTTCTCTCGTCGTCATTCTCGTCATTGCCCTTCACATTTACGCCCGTTATGCCCTCCGCCGCCACGCACGGCGTCAGGCCGTCCTACGTCGTCTCGGAATCCTCGCCTTCATCGACTCCGGCGACCATCACCCGCCACCGTCTCGCTCCGGGCTCGACCCCTTAGTCATGGCGTCGATGCCGGTCGTCGTTTTCAAGCACCAATCGGAAAGTCCAGACCCCTCCGGTGGCGGCGTGGAGTGTGCCGTGTGCTTGAGCGCTATCGTGGACGGCGAGACGGCGAGAATTTTGCCCAATTGTAAACATGTGTTTCATGTGGAGTGTATTGATAAATGGTTTGGGTCTCATTCCACATGTCCGATTTGTCGGACGGAGGCGGCGCCGATGATGCTGCCAGAACCTCGGGAAGGTCCGGCGGCAGAGGTGGGGGAGGGTGGTGGTGGTGGTGGTGGGTCAACCTCCCGATTGAGTTCGTTCAGACGGATTCTAAGTAGAGAAAGGTCTTCGCTAAGGATTCAACCCTGTGTACTCCAACATAGAAACGACGCCGTTCCAGACTTGGAATCCCAGTAAATATCAATTAATGTAAAAAACTATTTTTAACTTTTATTTATTT

mRNA sequence

ATGTCCTCCCCCACTAATCCCTCTTTCGACGGCGACGATATATACTTCGGCCCCGCCCATCCCCATCGCAACCCATATGATTTAAACAACAAAATCATGCTCACCGCCATCGTTTCCCTTTCTCTCGTCGTCATTCTCGTCATTGCCCTTCACATTTACGCCCGTTATGCCCTCCGCCGCCACGCACGGCGTCAGGCCGTCCTACGTCGTCTCGGAATCCTCGCCTTCATCGACTCCGGCGACCATCACCCGCCACCGTCTCGCTCCGGGCTCGACCCCTTAGTCATGGCGTCGATGCCGGTCGTCGTTTTCAAGCACCAATCGGAAAGTCCAGACCCCTCCGGTGGCGGCGTGGAGTGTGCCGTGTGCTTGAGCGCTATCGTGGACGGCGAGACGGCGAGAATTTTGCCCAATTGTAAACATGTGTTTCATGTGGAGTGTATTGATAAATGGTTTGGGTCTCATTCCACATGTCCGATTTGTCGGACGGAGGCGGCGCCGATGATGCTGCCAGAACCTCGGGAAGGTCCGGCGGCAGAGGTGGGGGAGGGTGGTGGTGGTGGTGGTGGGTCAACCTCCCGATTGAGTTCGTTCAGACGGATTCTAAGTAGAGAAAGGTCTTCGCTAAGGATTCAACCCTGTGTACTCCAACATAGAAACGACGCCGTTCCAGACTTGGAATCCCAGTAA

Coding sequence (CDS)

ATGTCCTCCCCCACTAATCCCTCTTTCGACGGCGACGATATATACTTCGGCCCCGCCCATCCCCATCGCAACCCATATGATTTAAACAACAAAATCATGCTCACCGCCATCGTTTCCCTTTCTCTCGTCGTCATTCTCGTCATTGCCCTTCACATTTACGCCCGTTATGCCCTCCGCCGCCACGCACGGCGTCAGGCCGTCCTACGTCGTCTCGGAATCCTCGCCTTCATCGACTCCGGCGACCATCACCCGCCACCGTCTCGCTCCGGGCTCGACCCCTTAGTCATGGCGTCGATGCCGGTCGTCGTTTTCAAGCACCAATCGGAAAGTCCAGACCCCTCCGGTGGCGGCGTGGAGTGTGCCGTGTGCTTGAGCGCTATCGTGGACGGCGAGACGGCGAGAATTTTGCCCAATTGTAAACATGTGTTTCATGTGGAGTGTATTGATAAATGGTTTGGGTCTCATTCCACATGTCCGATTTGTCGGACGGAGGCGGCGCCGATGATGCTGCCAGAACCTCGGGAAGGTCCGGCGGCAGAGGTGGGGGAGGGTGGTGGTGGTGGTGGTGGGTCAACCTCCCGATTGAGTTCGTTCAGACGGATTCTAAGTAGAGAAAGGTCTTCGCTAAGGATTCAACCCTGTGTACTCCAACATAGAAACGACGCCGTTCCAGACTTGGAATCCCAGTAA

Protein sequence

MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAEVGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ*
BLAST of Csa6G420520 vs. Swiss-Prot
Match: ATL40_ARATH (RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.5e-37
Identity = 92/218 (42.20%), Postives = 122/218 (55.96%), Query Frame = 1

Query: 3   SPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHA 62
           S  N + D DD  F     +   YD ++KI L   VS S+++I+V   ++YA++ L R +
Sbjct: 2   SSNNKTDDSDDRSFWQ---NSTSYDASSKIFLVTTVSFSIIIIIVFVYYLYAKFVLHRRS 61

Query: 63  RRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAV 122
             Q +     +++         PP R GLD LV+AS+P  V   +++       G ECAV
Sbjct: 62  AFQDL--SFSVVS--------QPPKR-GLDSLVIASLPTFVVGIKNDV-----AGTECAV 121

Query: 123 CLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAA---PMMLPEPREGPAA 182
           CLS + + + AR+LPNCKHVFHV C+D W  + STCP+CRTEA    P + PEPREGP  
Sbjct: 122 CLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPRLEPEPREGPVG 181

Query: 183 E-------VGEGGGGGGGSTSRLSSFRRILSRERSSLR 211
           +        G     GG S SRL SFRRIL+RERSS R
Sbjct: 182 DFAPPLDFAGVDNKTGGSSVSRLDSFRRILTRERSSNR 200

BLAST of Csa6G420520 vs. Swiss-Prot
Match: ATL41_ARATH (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.5e-36
Identity = 103/247 (41.70%), Postives = 131/247 (53.04%), Query Frame = 1

Query: 8   SFDGDDIYFGPAH----PHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHAR 67
           S D D   F   H    P+ + YDLN+KIML A+ SLS V+++V ALH+YAR+ LRR  R
Sbjct: 3   SNDRDHRRFNSDHHSFWPNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLRR--R 62

Query: 68  RQAVLRRLGILAFIDSGDHHP-PPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAV 127
           R+A  R L ++        HP    + GL+P V+AS+P         +   +    ECAV
Sbjct: 63  REA-FRGLPVIF------RHPFEMPKRGLNPTVIASLPTFTV---GATDGVAASATECAV 122

Query: 128 CLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEA--APMMLPEPREGP--- 187
           CLS + + + AR LPNCKH+FHV+C+D W  + STCP+CRTE    P + PEPREGP   
Sbjct: 123 CLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREGPVGT 182

Query: 188 ------------AAEVGEGGGGGG----GSTSRLSSFRRILSRERSSLRI-QPCVLQHRN 228
                         E                SRL+SFR+IL+RERSS RI   C  Q   
Sbjct: 183 APQLLVETRLNLTVEAASSSSSDNKTVVSPASRLNSFRKILTRERSSNRINHSCPDQ--- 234

BLAST of Csa6G420520 vs. Swiss-Prot
Match: ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 3.8e-29
Identity = 76/165 (46.06%), Postives = 98/165 (59.39%), Query Frame = 1

Query: 8   SFDGDDIYFGPAHPH---RNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYAL----RR 67
           S D D I F P   +      Y ++ KIML+AIV L  VVIL++ LH+YAR+ L    RR
Sbjct: 3   SNDQDPIPFRPEDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRR 62

Query: 68  HARRQAVLRRLGILAFI--DSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGV 127
           H RR++  RR  ++ F    S       +  GLDP V+ S+PV  F  ++   DP    +
Sbjct: 63  HLRRRSRNRRATMVFFTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHK-DP----I 122

Query: 128 ECAVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRT 164
           ECAVCLS   + ET R+LPNC+H FHV+CID WF SHSTCP+CR+
Sbjct: 123 ECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRS 162

BLAST of Csa6G420520 vs. Swiss-Prot
Match: ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-25
Identity = 72/194 (37.11%), Postives = 100/194 (51.55%), Query Frame = 1

Query: 9   FDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVL 68
           FD     +G  +   + Y LN KIML +++ L + VIL++  H YAR+  RR  RR  + 
Sbjct: 5   FDSSKTLWGNMNHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRR--IR 64

Query: 69  RRLGILAFIDSGDHHPPPSRSGL---DPLVMASMPVVVFKHQS-ESPDPSGGGVECAVCL 128
           RR+       +    P  S S L   DP V+  +P+ V+  ++ ESP       EC+VCL
Sbjct: 65  RRISAHLRSLAAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLE-----ECSVCL 124

Query: 129 SAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRT---EAAPMMLPEPREG--PAA 188
           S   + +  R+LP C HVFHV+CID WF S S+CP+CR     A P+  PEP     P+ 
Sbjct: 125 SEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSV 184

Query: 189 EVGEGGGGGGGSTS 194
           +  E    G  S+S
Sbjct: 185 KPIEDTEAGSSSSS 191

BLAST of Csa6G420520 vs. Swiss-Prot
Match: ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-23
Identity = 58/142 (40.85%), Postives = 79/142 (55.63%), Query Frame = 1

Query: 26  YDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLRRLGILAFIDSGDHHPP 85
           Y LN KIML++++ L + VI+++  H YAR+  RRH RR  + RR+       S      
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRR--IRRRIRSHLRTLSAS---- 81

Query: 86  PSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAIVDGETARILPNCKHVFHV 145
           P    LD  V+  +P+ V+   S++P P     EC+VCLS   + +  R+LP C H FHV
Sbjct: 82  PRDQALDQAVLDKIPIFVYS--SKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHV 141

Query: 146 ECIDKWFGSHSTCPICRTEAAP 168
           +CID WF S STCP+CR    P
Sbjct: 142 DCIDTWFRSRSTCPLCRAPVQP 155

BLAST of Csa6G420520 vs. TrEMBL
Match: A0A0A0KJL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G420520 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 4.6e-130
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1

Query: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60
           MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR
Sbjct: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60

Query: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120
           HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC
Sbjct: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120

Query: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180
           AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE
Sbjct: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180

Query: 181 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 230
           VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ
Sbjct: 181 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 229

BLAST of Csa6G420520 vs. TrEMBL
Match: G4V490_CUCSA (Putative ring zinc finger protein (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.3e-100
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1

Query: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60
           MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR
Sbjct: 27  MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 86

Query: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120
           HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC
Sbjct: 87  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 146

Query: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAA 180
           AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAA
Sbjct: 147 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAA 205

BLAST of Csa6G420520 vs. TrEMBL
Match: B9SGM1_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0554190 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.0e-52
Identity = 125/241 (51.87%), Postives = 146/241 (60.58%), Query Frame = 1

Query: 10  DGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLR 69
           +G+D    P   HR+ YDLN+KIML AI SLS VV+LVI LHIYAR  LRR AR +A +R
Sbjct: 28  EGED---SPLFVHRDTYDLNSKIMLAAITSLSFVVVLVIVLHIYARCVLRRQARERANIR 87

Query: 70  RLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAIVD 129
           RLG+            P ++GLDP+V+AS+P+ V+K  +   D      ECAVCLS + D
Sbjct: 88  RLGLATATSE------PPKTGLDPVVIASLPIFVYKQSNG--DQEDNDQECAVCLSVLQD 147

Query: 130 GETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAEVG------- 189
            E AR LPNCKH FH ECIDKW  SHSTCPICRTEA P + PEPREGP    G       
Sbjct: 148 QEMARSLPNCKHTFHAECIDKWLTSHSTCPICRTEAEPRIQPEPREGPVPAGGAATAPPL 207

Query: 190 -----EGGGGGG---------GSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLES 230
                EG    G         GS SRLSSFRRILSRERSS RIQ    + +   + DLE 
Sbjct: 208 EQVGTEGTSESGNQSSSNKASGSISRLSSFRRILSRERSSRRIQS---ETQEQGLEDLER 254

BLAST of Csa6G420520 vs. TrEMBL
Match: M1AJX0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009405 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.5e-51
Identity = 122/246 (49.59%), Postives = 150/246 (60.98%), Query Frame = 1

Query: 9   FDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVL 68
           FD DD    P    +N YDLN+KIM+TAI+SLS+V+  V  LH+YAR  LRR ARR+A L
Sbjct: 3   FDDDD---PPFFHRKNKYDLNSKIMITAIISLSIVIFFVTLLHVYARCVLRRQARRRAEL 62

Query: 69  RRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAIV 128
           +R+ I   I S      P ++GLDP V+AS+PV + K    + + S   +EC VCLSA+ 
Sbjct: 63  QRISI---ITSSALQVEPPKTGLDPSVIASLPVFILKQNDINQNNS---IECTVCLSALE 122

Query: 129 DGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMML-PEPREG------PAAEV 188
           DGET R LPNCKHVFH ECIDKWFGSHSTCPICRTEA P +L PEPREG      P+A  
Sbjct: 123 DGETVRKLPNCKHVFHTECIDKWFGSHSTCPICRTEAEPRLLQPEPREGVVGPTTPSAPP 182

Query: 189 GEGGGGG------------------GGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAV 230
            EGG                      GS+SRLSSFR+++S E+SS R+           +
Sbjct: 183 IEGGDSTNVEDCGLAQDSTSSSAKINGSSSRLSSFRKMISMEKSSRRLHVQFCGVEEGVI 239

BLAST of Csa6G420520 vs. TrEMBL
Match: A0A022QTZ5_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a024357mg PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.2e-51
Identity = 116/227 (51.10%), Postives = 142/227 (62.56%), Query Frame = 1

Query: 23  RNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLRRLGILAFIDSGDH 82
           ++ YD+N+KIMLTAI+SLS VVILV  LHIYAR+ LRR +RRQA LRRLG +    +   
Sbjct: 15  KSNYDMNSKIMLTAIISLSFVVILVTILHIYARFLLRRQSRRQAELRRLGFITASANIQS 74

Query: 83  HPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGG-------VECAVCLSAIVDGETARI 142
              P ++GLDP VMA++P  +++  S S D             EC+VCLS + DGE AR 
Sbjct: 75  ASEPPKTGLDPAVMAALPHFIYRKTSSSNDDDDDDDDDETSLTECSVCLSILEDGEIART 134

Query: 143 LPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAEVGEGGGGG------- 202
           LPNCKH FH ECIDKWF ++STCPICR +A P ++PEPREG    V   GGG        
Sbjct: 135 LPNCKHTFHAECIDKWFVTNSTCPICRMDAEPRLVPEPREGVVVVVVAAGGGAPPSAPPL 194

Query: 203 ------GGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 230
                   S SRLSSFRRILSRERSS        + +  +VPDLE Q
Sbjct: 195 EGTSDKNSSGSRLSSFRRILSRERSS-----SSRRMQTSSVPDLERQ 236

BLAST of Csa6G420520 vs. TAIR10
Match: AT2G42350.1 (AT2G42350.1 RING/U-box superfamily protein)

HSP 1 Score: 155.6 bits (392), Expect = 3.7e-38
Identity = 92/218 (42.20%), Postives = 122/218 (55.96%), Query Frame = 1

Query: 3   SPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHA 62
           S  N + D DD  F     +   YD ++KI L   VS S+++I+V   ++YA++ L R +
Sbjct: 2   SSNNKTDDSDDRSFWQ---NSTSYDASSKIFLVTTVSFSIIIIIVFVYYLYAKFVLHRRS 61

Query: 63  RRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAV 122
             Q +     +++         PP R GLD LV+AS+P  V   +++       G ECAV
Sbjct: 62  AFQDL--SFSVVS--------QPPKR-GLDSLVIASLPTFVVGIKNDV-----AGTECAV 121

Query: 123 CLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAA---PMMLPEPREGPAA 182
           CLS + + + AR+LPNCKHVFHV C+D W  + STCP+CRTEA    P + PEPREGP  
Sbjct: 122 CLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPRLEPEPREGPVG 181

Query: 183 E-------VGEGGGGGGGSTSRLSSFRRILSRERSSLR 211
           +        G     GG S SRL SFRRIL+RERSS R
Sbjct: 182 DFAPPLDFAGVDNKTGGSSVSRLDSFRRILTRERSSNR 200

BLAST of Csa6G420520 vs. TAIR10
Match: AT2G42360.1 (AT2G42360.1 RING/U-box superfamily protein)

HSP 1 Score: 152.5 bits (384), Expect = 3.1e-37
Identity = 103/247 (41.70%), Postives = 131/247 (53.04%), Query Frame = 1

Query: 8   SFDGDDIYFGPAH----PHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHAR 67
           S D D   F   H    P+ + YDLN+KIML A+ SLS V+++V ALH+YAR+ LRR  R
Sbjct: 3   SNDRDHRRFNSDHHSFWPNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLRR--R 62

Query: 68  RQAVLRRLGILAFIDSGDHHP-PPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAV 127
           R+A  R L ++        HP    + GL+P V+AS+P         +   +    ECAV
Sbjct: 63  REA-FRGLPVIF------RHPFEMPKRGLNPTVIASLPTFTV---GATDGVAASATECAV 122

Query: 128 CLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEA--APMMLPEPREGP--- 187
           CLS + + + AR LPNCKH+FHV+C+D W  + STCP+CRTE    P + PEPREGP   
Sbjct: 123 CLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREGPVGT 182

Query: 188 ------------AAEVGEGGGGGG----GSTSRLSSFRRILSRERSSLRI-QPCVLQHRN 228
                         E                SRL+SFR+IL+RERSS RI   C  Q   
Sbjct: 183 APQLLVETRLNLTVEAASSSSSDNKTVVSPASRLNSFRKILTRERSSNRINHSCPDQ--- 234

BLAST of Csa6G420520 vs. TAIR10
Match: AT3G16720.1 (AT3G16720.1 TOXICOS EN LEVADURA 2)

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-30
Identity = 76/165 (46.06%), Postives = 98/165 (59.39%), Query Frame = 1

Query: 8   SFDGDDIYFGPAHPH---RNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYAL----RR 67
           S D D I F P   +      Y ++ KIML+AIV L  VVIL++ LH+YAR+ L    RR
Sbjct: 3   SNDQDPIPFRPEDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRR 62

Query: 68  HARRQAVLRRLGILAFI--DSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGV 127
           H RR++  RR  ++ F    S       +  GLDP V+ S+PV  F  ++   DP    +
Sbjct: 63  HLRRRSRNRRATMVFFTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHK-DP----I 122

Query: 128 ECAVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRT 164
           ECAVCLS   + ET R+LPNC+H FHV+CID WF SHSTCP+CR+
Sbjct: 123 ECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRS 162

BLAST of Csa6G420520 vs. TAIR10
Match: AT3G62690.1 (AT3G62690.1 AtL5)

HSP 1 Score: 116.3 bits (290), Expect = 2.5e-26
Identity = 72/194 (37.11%), Postives = 100/194 (51.55%), Query Frame = 1

Query: 9   FDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVL 68
           FD     +G  +   + Y LN KIML +++ L + VIL++  H YAR+  RR  RR  + 
Sbjct: 5   FDSSKTLWGNMNHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRR--IR 64

Query: 69  RRLGILAFIDSGDHHPPPSRSGL---DPLVMASMPVVVFKHQS-ESPDPSGGGVECAVCL 128
           RR+       +    P  S S L   DP V+  +P+ V+  ++ ESP       EC+VCL
Sbjct: 65  RRISAHLRSLAAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLE-----ECSVCL 124

Query: 129 SAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRT---EAAPMMLPEPREG--PAA 188
           S   + +  R+LP C HVFHV+CID WF S S+CP+CR     A P+  PEP     P+ 
Sbjct: 125 SEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSV 184

Query: 189 EVGEGGGGGGGSTS 194
           +  E    G  S+S
Sbjct: 185 KPIEDTEAGSSSSS 191

BLAST of Csa6G420520 vs. TAIR10
Match: AT2G47560.1 (AT2G47560.1 RING/U-box superfamily protein)

HSP 1 Score: 111.3 bits (277), Expect = 7.9e-25
Identity = 58/142 (40.85%), Postives = 79/142 (55.63%), Query Frame = 1

Query: 26  YDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLRRLGILAFIDSGDHHPP 85
           Y LN KIML++++ L + VI+++  H YAR+  RRH RR  + RR+       S      
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRR--IRRRIRSHLRTLSAS---- 81

Query: 86  PSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAIVDGETARILPNCKHVFHV 145
           P    LD  V+  +P+ V+   S++P P     EC+VCLS   + +  R+LP C H FHV
Sbjct: 82  PRDQALDQAVLDKIPIFVYS--SKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHV 141

Query: 146 ECIDKWFGSHSTCPICRTEAAP 168
           +CID WF S STCP+CR    P
Sbjct: 142 DCIDTWFRSRSTCPLCRAPVQP 155

BLAST of Csa6G420520 vs. NCBI nr
Match: gi|449444961|ref|XP_004140242.1| (PREDICTED: RING-H2 finger protein ATL40-like, partial [Cucumis sativus])

HSP 1 Score: 471.9 bits (1213), Expect = 6.6e-130
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1

Query: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60
           MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR
Sbjct: 27  MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 86

Query: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120
           HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC
Sbjct: 87  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 146

Query: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180
           AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE
Sbjct: 147 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 206

Query: 181 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 230
           VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ
Sbjct: 207 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 255

BLAST of Csa6G420520 vs. NCBI nr
Match: gi|700192752|gb|KGN47956.1| (hypothetical protein Csa_6G420520 [Cucumis sativus])

HSP 1 Score: 471.9 bits (1213), Expect = 6.6e-130
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1

Query: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60
           MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR
Sbjct: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60

Query: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120
           HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC
Sbjct: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120

Query: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180
           AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE
Sbjct: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180

Query: 181 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 230
           VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ
Sbjct: 181 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 229

BLAST of Csa6G420520 vs. NCBI nr
Match: gi|659097157|ref|XP_008449472.1| (PREDICTED: RING-H2 finger protein ATL40-like [Cucumis melo])

HSP 1 Score: 423.7 bits (1088), Expect = 2.1e-115
Identity = 208/229 (90.83%), Postives = 215/229 (93.89%), Query Frame = 1

Query: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60
           MSS  NPSFD  DIYFGP+HPHRNPYDLNNKIMLTAI+SLSLVV+LVIALHIYARYALRR
Sbjct: 1   MSSSANPSFDDGDIYFGPSHPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60

Query: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120
           HARRQAVLRRLGILA +DS D H PPSRSGLDPLVMASMPVVVFKHQSE+P+PSGG VEC
Sbjct: 61  HARRQAVLRRLGILALVDSSDPHLPPSRSGLDPLVMASMPVVVFKHQSENPEPSGGAVEC 120

Query: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180
           AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE
Sbjct: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180

Query: 181 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 230
           VGE    GGGS+SRLSSFRRILSRERSSLRIQPCV QHRNDAVPDLESQ
Sbjct: 181 VGE---SGGGSSSRLSSFRRILSRERSSLRIQPCVFQHRNDAVPDLESQ 226

BLAST of Csa6G420520 vs. NCBI nr
Match: gi|347817472|gb|AEP25855.1| (putative ring zinc finger protein [Cucumis sativus])

HSP 1 Score: 374.0 bits (959), Expect = 1.9e-100
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1

Query: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60
           MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR
Sbjct: 27  MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 86

Query: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120
           HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC
Sbjct: 87  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 146

Query: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAA 180
           AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAA
Sbjct: 147 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAA 205

BLAST of Csa6G420520 vs. NCBI nr
Match: gi|1009128481|ref|XP_015881256.1| (PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Ziziphus jujuba])

HSP 1 Score: 222.6 bits (566), Expect = 6.9e-55
Identity = 127/238 (53.36%), Postives = 152/238 (63.87%), Query Frame = 1

Query: 18  PAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLRRLGILA-F 77
           P   H+NPYDLN+ IMLTAI+SLS+V++LVIALHIYAR  L+R ARR+A + +LG  A  
Sbjct: 20  PLTDHKNPYDLNHNIMLTAIISLSVVILLVIALHIYARCVLQRQARRRAAIHQLGFTAAH 79

Query: 78  IDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGV--ECAVCLSAIVDGETAR 137
             SG+   PPS+ GL+P V+A +P+ VFK    S D  G     ECAVCL  + D E AR
Sbjct: 80  APSGE---PPSQ-GLEPSVIAMLPMFVFKQVDNSTDDDGNNTTTECAVCLCTLEDEEMAR 139

Query: 138 ILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAA---------EVG--- 197
           +LPNCKH FH EC+DKWFGSHSTCPICRTEA P   PEPREGP            +G   
Sbjct: 140 LLPNCKHTFHAECVDKWFGSHSTCPICRTEAQPRPQPEPREGPVEDSSTTPPLERIGSVS 199

Query: 198 ---EGGGGG--------GGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 230
              EG            GGS+SRL+SFRRILSRERSS R+  C    + D + DLE Q
Sbjct: 200 LCSEGTSDCAAQPSPKIGGSSSRLNSFRRILSRERSSRRVHSC---GQEDGIIDLERQ 250

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ATL40_ARATH6.5e-3742.20RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2 SV=1[more]
ATL41_ARATH5.5e-3641.70E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41 PE=1 SV=1[more]
ATL2_ARATH3.8e-2946.06RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2[more]
ATL5_ARATH4.4e-2537.11RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1[more]
ATL64_ARATH1.4e-2340.85RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KJL6_CUCSA4.6e-130100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G420520 PE=4 SV=1[more]
G4V490_CUCSA1.3e-100100.00Putative ring zinc finger protein (Fragment) OS=Cucumis sativus PE=2 SV=1[more]
B9SGM1_RICCO1.0e-5251.87Ring finger protein, putative OS=Ricinus communis GN=RCOM_0554190 PE=4 SV=1[more]
M1AJX0_SOLTU2.5e-5149.59Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009405 PE=4 SV=1[more]
A0A022QTZ5_ERYGU3.2e-5151.10Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a024357mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G42350.13.7e-3842.20 RING/U-box superfamily protein[more]
AT2G42360.13.1e-3741.70 RING/U-box superfamily protein[more]
AT3G16720.12.2e-3046.06 TOXICOS EN LEVADURA 2[more]
AT3G62690.12.5e-2637.11 AtL5[more]
AT2G47560.17.9e-2540.85 RING/U-box superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449444961|ref|XP_004140242.1|6.6e-130100.00PREDICTED: RING-H2 finger protein ATL40-like, partial [Cucumis sativus][more]
gi|700192752|gb|KGN47956.1|6.6e-130100.00hypothetical protein Csa_6G420520 [Cucumis sativus][more]
gi|659097157|ref|XP_008449472.1|2.1e-11590.83PREDICTED: RING-H2 finger protein ATL40-like [Cucumis melo][more]
gi|347817472|gb|AEP25855.1|1.9e-100100.00putative ring zinc finger protein [Cucumis sativus][more]
gi|1009128481|ref|XP_015881256.1|6.9e-5553.36PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G420520.1Csa6G420520.1mRNA


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 119..162
score: 5.9
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 120..161
score: 2.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 120..162
score: 1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 118..164
score: 2.0
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 27..187
score: 2.3
NoneNo IPR availablePANTHERPTHR14155:SF179SUBFAMILY NOT NAMEDcoord: 27..187
score: 2.3
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 99..168
score: 1.08

The following gene(s) are paralogous to this gene:

None