Cucsa.178680 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.178680
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	R3H domain protein
Location	scaffold01227 : 1007524 .. 1013600 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCAGACTCGTCAGATAACCGTAGAGTTTGGGATTCCTTCGAAAATCGAAACCCCTGCTCAAATTCCTTCCTTCTTCCAGTCTTCAACCTTCATACTTCACAATGACTGTCGCCCAATTCGCTATGGTAACTTCTTCTCCATCTTTCTTTCTTTCTTTTCTTTCTTCTTCTTCTTCTTCTTCTTCACTCTTATCTTCTGATTTCACAGAGTCGCTTAATTTTGCTGCAAATTGTAGTAATGTTCTCTTAGTTTAGTTTTCCGATTTTTTCATGGGCTCTAGCATATTTTATATTTTGATTAGTTGACTGTGAAGAACTTGGTAGTTTCTGGATCAGGGTATTAGGTAGTTCGGATTTTTAATTTAATTGATTTTtTTTTtGGCTCCTGGGTTTCGTTTTATATGTGCCAATTTTTTTTtAAGCTTCGGTGATTTGAGATTGTTATATATTTTTAATTTATTTTtCCTTTTTTGATTGGATTTTGGTATGAAAGACCGAATGTTGTTCTGCAAATGGAAGTAATTCATACACTGAATTTCAAGAAAATGTGATGCAGTAGGTTTTCCTTATTTCTTGATATCAAATATTGGAAATCCTTTCTGGAAAAAAAAaGTGTTCTTTGGGTTTTAACGTTTGTATTGCCTCTGACTAGTATCTTGATTCATCTAGGTTAAAAAaaCACTCTTGGTTCCTAAACTTGAAGTAAAATAACAACTTAATCTTGAACTTTGGTTTGTGACAATTTAGTCTTTGTAGCTTCAATTTTGTAATGATTTAGTCATTGAACTTTAGTATGTAACAATTTTGtCCCTTTGGTAAAAGAATTCATAAAATTAGATGTTAATTTTTATTAATTTATCATGTAGTCTTTGTAATTTATAAAAATATTGAGTCCCTTATTAGTTTATTGGTTTATTTATGCAATAAACCTCTTTAGATCTTAACACTAGTTTCTACAATAGGAGCTAAATCATTACAAAATTTAAAGTGCAAGAACTAAGTTGGTACACAGTAAAATTTAGGGACTAAATTTTTACAAAACTGGAAGTACGTGGACTAAATGTTGCAAACCAAAGTTCAAGGACGAAATCCTTATTTCTATGAAAGTTTAGGGACTAAAGGGGACTTTTAACAATTCATCTAAATGGATTTTAGGTTTTCATTTAGCAAAGAAAAGAGGAGATTTGTAGTATTATGCACCAGAAGTTCTGGGCAAGTTAATTAATGAAAGAAAATGTTATAGAAATGAAGATATCTTCTGCCATTTTCAGTGGCCAGTGTTTAAAAGCCTTCCCGACTCCGGACCTAGCGCTTGGCATGCAAACAAGGGATGCATTAGGTGTGCATGCCTTTTGTGAAGTCCCATAGCCCAAAGCACTGGCCCTTGGGCCTTTTTTAATTATTTTTAAAGAATAGTAGTTGTTAGGTTTTTTtGTCTGTAGTAACTAAAAAAAaTAAGCTTTACTAAGACTAAATTCCAAACTTTTTGTGCTCAGGGTTCCTTTTCCCATTCCCAATTCAATTATACCTTCTAGTCTTATTTAGTAGTTTTATGTATGATATGTGTCTCTCCTATATGTACCACGTTTTTGTTGCGAATTGCATTTAAGTCTCAAAAGACTATTGCGCTTTATTAGCTTTAAAAAAGAGTTTGACTTTCTATCTTCAAACTTGCATTAGTGTACACACATTCTAATCTTCAAAAACAGCTTTTCTCTCTCTCTTTTTCCCCCTTTATGCTAGGACAAGGTAGATTCTTGTGTGTTTGAACGGAGTTGTTTACTAAAATATAAATATTCTAGAACCTTAAGTAGATATCTAATTGTTAGTACTTGCTATTACATAATCCTACATTGTACTCTTTTCGTTAACTTTTTCCATTTTTTTTtCCGTTATGGCTGATATCTGACTCTCCAGGTGGAGGAGTTGGCCTTTCTTGTTAAGGACAACCTCCCCAGCAAGCATCTTATTCTATCAATGGAAGAAACCTTCATCAACTTTCTTCACGATGAAACCAGGTAATTGTTGGATGATGGTTAGATGATGTTAGTTATTGAATTTTAAAATATTTTCGTATTTCATTCCGCCAATGGTGATGGGACAAGTGGAAGATTATGCGCTCAAACAACAGTAGCTATGTATCTAGATTGGATCCTGTTAGATACTAGATATTTAGTTTGTGTTGGTTAAGGGGCATAAGGGGTTATGGGGGAACAAACAAAATGGCTGTTGGAAGAAAAAAAAaaTGAAGAACCTTCCAATGAACATACAACGACACAAACTAAAGAAAAGCTTTAGATTCAAATTCAAACAAATGGGGTAGTTTGGTTGCTTATTGGGCTGGATCTCCAATTCATTTGCAGGCTGAAGAGAAGGTTGTTGGTTATGTGTTTTGATTATGCTAAAAAAAaTGGAAGAGGAAGAAGAAGAAGAAAAAGTTTCCCGATTTTGTGATCATGAATGTAAGCTCACCTTGAGGGCAAGGTGTCTTTGACGGGCGGACTAATGTTAGGTACTAGATATGTAGTTTGTGTTGGTTAAGGTGTACAAGGGTAATTAGATAGATACGGAGTTACTAGTAGTTATTGTATGAGGGTAGTTACTAGAGTGGTTACTACTTATTATAAATAGGAGGGTAAGTGGGTGAGGAATTGGTTATTCTGTTGAGTGATCTAGGGCTTGAGTGAGAATACTCAAGAGGGAGGTTCTAAGTGCGTTATACTTGGGTTTTTCTTGTATTTCTTTATAGTGATATTTCATTATATACAAATCGTGTTCTTGTTAGGAAGTATCCTAATAGATCCCGCCCCCCATAAGAAACAATTACTTTGTGGGTAATATCCTAATGGGCTGCCCTTGCCATTTTTCTATGAACACTTTGGAGCAGAAAGGTCAATTTTTGTTATCTCTCAATAGTTGTTTGGCTAGCTAATCTAGAAGATAGTAACCAGTATTTCTTCGTTTGGTTCTTAACTCACATTATGGTTCTTGCCCATTGGAGAATATCTTGAGGTTTACATTGTTCTTTACCCATGGCTTTTATGGTGACCGCTAACTTTTTAGAATTTATTTGAATAGCAGTTCAGATGGAATCTTGGAGTTGAAACCAATGGATTCATACAACCGTCTTCTTTTGCATCGCCTTGCTGATATTTTTGGGTACATTTTTtCCCTTCCATGCATATTATTTGTCTAGTTCGTTGTGAGGTTGAATTTTTTATTTTCTTGTTACTCATGTCAGCCTCTCTAACTTTGTACTTCTCCCCATTCCTCTGTCAGACTTGGCCATGTATCAGTTGGTGAAGGTGATAATAGACACTTGGTTTTGGAGCGATACCCAGAGTCATCAATGTATGTGAACAATTCTAGATCTGACTTCTTTTTGTTCAATATCTTCATAACGTAAATTGTTATTGATAAAACATTTTATCTGGTCATCTATAGCAATTATACATTGAAAGAATTGAATAAGCCTCTTCCTTATTCTTCTTTCCTAGAAGTCTTCTCCACAGAAAGATCAAAGAAGTTCTACTTTAGTTTGGAGTTAAGGCATTTGAGATTTGTTATTATGAATATTCAAGTACAGACAGTATACCACCCTCTCTCTCCCCTGCTTTTGTATTCCAAGTTCTCAGCCGCTGCTCTCATTCCAAATTCTGCTTGTTTTCATTATTGGAAAAGGAGACTTCCTCACGTCCACTCAGGGAAAGAGTTGGACTACACAGCAATGCCATTGGCTATATGAAAAGATGGACTTCTTGTAGTTCTCATCAAACAAGTTTTATTTGTGACAGAAGTCCTTTATTTCTTCATCATATTCATACTTCATTTATTTCTTAGTTATGAATATATTTTGGGATCCAATCTTTCTTTCATCTTTCAAATAAGAAACCAAATTTTATGATATAGCTTAAAGTGAAACTAGGCTTCTTATATTTACAAACTGTGGTACCATAGGGACATGGTAGGACGGGTGATACACTGATACTAATAAAGCTCATTTGTTCATAAACTTTTTGTCTATTGCAGACCGTCCATTCTTGTGAGTGATATTCTGTGGGAGTATGATGAACCTCAAATGTCAACGATACCACACCAACTATTAAGGAGAAAGGAAAATTCTTCTGGTATACTTATTATTTTGTGACGGCATAAGCAGTACCTGCAATTGTTTCAGTTCATGCTATTTAGTATCAATTACAATTTGATCATCAGAAAGTTTTCGTGTGCATTTATTGTTAGAATTAGTGGGCTTTGCTCAAGGAAGGATTTATTCTATTATCCTTTTCTTTTTtATCATAAGTTGTAACCTATTTATCTTCCCTCTTAAATCTTTTGTTAATATGAGAAATTAATAAGACAGTCAATTGTGGTTTTTCTCCCAGCACTCAGGTTTCCATGTAATTTGGTGTCTACTTTACTTTACCGCTTTTAACATTTATAATGGACTTAAGGTCATTTGAAGGCTGCAGAGGAGATGGTATGATGAACATGGAATATTTATTTGTGAAAATTCCCTACTGTGCTCTCTCTCTCTCTCTTCACTTTAAATAGCATTAGAAGGAATGCCACGGTATGAATAGAGTAGAATAAAAGGTCTTCTGACTTCCGAGTAGGATTTGATAGGGATTCTGGATCTGAAGTTTGAAGTTTAGGGTGAACACGACCTCTTTAATTGAACGAACGAGTATGTATGCAAATATCTCATTTTAGGGTAGAAAaTAAAATGAAAAATGTTGTTCAAGTTTGCACATTTAACAAAGTTTGTTTAATGTCAGTTCATCATATTGGAAGTTCTCATTTATTATGTTGAATGCCTATTTATTTTACTTGCAGATTTACTTTCAAAAAaTTACAAGAAACTGAGTTGCCTATACTTGATGTTGTGTTTCAGCGAGTTCAACAAAATCATCTCCTCAACGTTCGCTTGAAGAGAGAGAAGCAGCTTATCTGGCTGTCCGTGAGCGAATTTTCATGACGCACGTTGGAGAGGATAACGAGCCCCTGAAACCAAAGCCACGATGTGATCCTGCAGTTGCACGACGCATGATTGCTCATGCACTGGGACAGCGAGTTAATTCATTATCAGAGGATACTAATTGCCATCAGAAAGAGCAAGGAGGTGTCACGAACAATGCATACATCCAAGCAAGAGATTCAAAGTTGCCTGATTCTACTGTGGAAGCCATTAACAAAACCATTTCACGGTCGGATCAATGTGTGAACTTGAAGAATGAATTGGATAAGAATTGTAATCCAGACGTGTCATTGGCAAGGGGAAGTACTGCTGCCAAAATGAAACCTGCCAAGAGTTATCCAAAGGCAAGTCATGTCGACAATGAGCACTTGAAGAGAGAACATTTAGGAGCTGCAAAGAGGATGTTTTCTCAGGCTTTAGGCAAGCACTGCCGAAGGAATGAATCTCTTCAAACTCGTGGGGAAGCAGATTAAAATGGAAACAAGATTCAAATACATCTGCAGTAGCTATTGTTTTCTGGCATGATCTTTTGTCCTATTCACAATTTTTTGAGTTGTCAGGATTCCTGGTGCTAACAAAAAGATGAATGGGACTGTGTGATGACAAATTTGTCTATGTCGCATGGCCAATGGTCGTCAATGGTGTCATTGGCGAAATGATCAGGGTTGGATGCAATGCCTATGGCTGCTTTCATGTTGCCAATTCAGTTAGCAAATATGAAATCTGACCTTGCGTTCTCTAGCTTATTTATTCTGGGAATTCAATCTGGTCGTTTAAGCAGCACTGTGTGAGGAGATTGAACTATAGGTTCGAGTGGAGTTGTGTGTAAAGGTTGTGGAAATCAATTGGGATCGAATCTGTTCACTGATTGAGAGCACATAGCGGGTTGTGTCGGGTTAACATAGAGGTTTCTAACTTAAATCTGTGTTGGTACTTGACTGTTTATAGCCTCTCTCTATCTTTGCTGATGGCACAAATAGCGTCTCTTGGATTGTCATGGTTATGTACCTGACTCGACGATATCGGGCAATGCACTTTGTTTTATGTGAAATTGTAGTGGTTGAATTTTAAGCTTTATTGTTCCCTTTGAAATCTAGAG

mRNA sequence

GCCAGACTCGTCAGATAACCGTAGAGTTTGGGATTCCTTCGAAAATCGAAACCCCTGCTCAAATTCCTTCCTTCTTCCAGTCTTCAACCTTCATACTTCACAATGACTGTCGCCCAATTCGCTATGGTGGAGGAGTTGGCCTTTCTTGTTAAGGACAACCTCCCCAGCAAGCATCTTATTCTATCAATGGAAGAAACCTTCATCAACTTTCTTCACGATGAAACCAGTTCAGATGGAATCTTGGAGTTGAAACCAATGGATTCATACAACCGTCTTCTTTTGCATCGCCTTGCTGATATTTTTGGACTTGGCCATGTATCAGTTGGTGAAGGTGATAATAGACACTTGGTTTTGGAGCGATACCCAGAGTCATCAATACCGTCCATTCTTGTGAGTGATATTCTGTGGGAGTATGATGAACCTCAAATGTCAACGATACCACACCAACTATTAAGGAGAAAGGAAAATTCTTCTGCGAGTTCAACAAAATCATCTCCTCAACGTTCGCTTGAAGAGAGAGAAGCAGCTTATCTGGCTGTCCGTGAGCGAATTTTCATGACGCACGTTGGAGAGGATAACGAGCCCCTGAAACCAAAGCCACGATGTGATCCTGCAGTTGCACGACGCATGATTGCTCATGCACTGGGACAGCGAGTTAATTCATTATCAGAGGATACTAATTGCCATCAGAAAGAGCAAGGAGGTGTCACGAACAATGCATACATCCAAGCAAGAGATTCAAAGTTGCCTGATTCTACTGTGGAAGCCATTAACAAAACCATTTCACGGTCGGATCAATGTGTGAACTTGAAGAATGAATTGGATAAGAATTGTAATCCAGACGTGTCATTGGCAAGGGGAAGTACTGCTGCCAAAATGAAACCTGCCAAGAGTTATCCAAAGGCAAGTCATGTCGACAATGAGCACTTGAAGAGAGAACATTTAGGAGCTGCAAAGAGGATGTTTTCTCAGGCTTTAGGCAAGCACTGCCGAAGGAATGAATCTCTTCAAACTCGTGGGGAAGCAGATTAAAATGGAAACAAGATTCAAATACATCTGCAGTAGCTATTGTTTTCTGGCATGATCTTTTGTCCTATTCACAATTTTTTGAGTTGTCAGGATTCCTGGTGCTAACAAAAAGATGAATGGGACTGTGTGATGACAAATTTGTCTATGTCGCATGGCCAATGGTCGTCAATGGTGTCATTGGCGAAATGATCAGGGTTGGATGCAATGCCTATGGCTGCTTTCATGTTGCCAATTCAGTTAGCAAATATGAAATCTGACCTTGCGTTCTCTAGCTTATTTATTCTGGGAATTCAATCTGGTCGTTTAAGCAGCACTGTGTGAGGAGATTGAACTATAGGTTCGAGTGGAGTTGTGTGTAAAGGTTGTGGAAATCAATTGGGATCGAATCTGTTCACTGATTGAGAGCACATAGCGGGTTGTGTCGGGTTAACATAGAGGTTTCTAACTTAAATCTGTGTTGGTACTTGACTGTTTATAGCCTCTCTCTATCTTTGCTGATGGCACAAATAGCGTCTCTTGGATTGTCATGGTTATGTACCTGACTCGACGATATCGGGCAATGCACTTTGTTTTATGTGAAATTGTAGTGGTTGAATTTTAAGCTTTATTGTTCCCTTTGAAATCTAGAG

Coding sequence (CDS)

ATGACTGTCGCCCAATTCGCTATGGTGGAGGAGTTGGCCTTTCTTGTTAAGGACAACCTCCCCAGCAAGCATCTTATTCTATCAATGGAAGAAACCTTCATCAACTTTCTTCACGATGAAACCAGTTCAGATGGAATCTTGGAGTTGAAACCAATGGATTCATACAACCGTCTTCTTTTGCATCGCCTTGCTGATATTTTTGGACTTGGCCATGTATCAGTTGGTGAAGGTGATAATAGACACTTGGTTTTGGAGCGATACCCAGAGTCATCAATACCGTCCATTCTTGTGAGTGATATTCTGTGGGAGTATGATGAACCTCAAATGTCAACGATACCACACCAACTATTAAGGAGAAAGGAAAATTCTTCTGCGAGTTCAACAAAATCATCTCCTCAACGTTCGCTTGAAGAGAGAGAAGCAGCTTATCTGGCTGTCCGTGAGCGAATTTTCATGACGCACGTTGGAGAGGATAACGAGCCCCTGAAACCAAAGCCACGATGTGATCCTGCAGTTGCACGACGCATGATTGCTCATGCACTGGGACAGCGAGTTAATTCATTATCAGAGGATACTAATTGCCATCAGAAAGAGCAAGGAGGTGTCACGAACAATGCATACATCCAAGCAAGAGATTCAAAGTTGCCTGATTCTACTGTGGAAGCCATTAACAAAACCATTTCACGGTCGGATCAATGTGTGAACTTGAAGAATGAATTGGATAAGAATTGTAATCCAGACGTGTCATTGGCAAGGGGAAGTACTGCTGCCAAAATGAAACCTGCCAAGAGTTATCCAAAGGCAAGTCATGTCGACAATGAGCACTTGAAGAGAGAACATTTAGGAGCTGCAAAGAGGATGTTTTCTCAGGCTTTAGGCAAGCACTGCCGAAGGAATGAATCTCTTCAAACTCGTGGGGAAGCAGATTAA

Protein sequence

MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHDETSSDGILELKPMDSYNRLLLHRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRKENSSASSTKSSPQRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRMIAHALGQRVNSLSEDTNCHQKEQGGVTNNAYIQARDSKLPDSTVEAINKTISRSDQCVNLKNELDKNCNPDVSLARGSTAAKMKPAKSYPKASHVDNEHLKREHLGAAKRMFSQALGKHCRRNESLQTRGEAD*

Homology

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BLAST of Cucsa.178680 vs. Swiss-Prot
Match: ARP21_MOUSE (cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-06
Identity = 44/146 (30.14%), Postives = 73/146 (50.00%), Query Frame = 1


Query: 16  VKDNLPSKHLILSMEETFINFLHDETSSDGILELKPMDSYNRLLLHRLADIFGLGHVSVG 75
           +K+N   + ++L ME+  I+F+ D  S++   +   M SY R+L+HR+A  FGL H    
Sbjct: 156 LKNNSRDRMILLKMEQEMIDFIAD--SNNHYKKFPQMSSYQRMLVHRVAAYFGLDHNVDQ 215

Query: 76  EGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRKENSSASSTKSSPQ-- 135
            G  + +++ +   + IP     + L   DE    +    +L+R +NSS     +  +  
Sbjct: 216 TG--KSVIINKTSSTRIPEQRFCEHL--KDEKSEESQKRFILKR-DNSSIDKEDNQNRMH 275

Query: 136 --------RSLEEREAAYLAVRERIF 152
                   +S+EERE  Y  VRERIF
Sbjct: 276 PFRDDRRSKSIEEREEEYQRVRERIF 294

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BLAST of Cucsa.178680 vs. Swiss-Prot
Match: R3HD2_BOVIN (R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06
Identity = 42/157 (26.75%), Postives = 73/157 (46.50%), Query Frame = 1


Query: 10  EELAFLVKDNLPSKHLILSMEETFINFLHDETSSDGILELKPMDSYNRLLLHRLADIFGL 69
           E L   +K N   + ++L +E+  ++F++D  +     +   M SY+R+LLHR+A  FG+
Sbjct: 156 EFLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ--FKKFPQMTSYHRMLLHRVAAYFGM 215

Query: 70  GHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRKENSSASSTK 129
            H     G  + +++ +   + IP    S+ +   DE         +L+R + S      
Sbjct: 216 DHNVDQTG--KAVIINKTSNTRIPEQRFSEHI--KDEKNTEFQQRFILKRDDASMDRDDN 275

Query: 130 S--------SPQRSLEEREAAYLAVRERIFMTHVGED 159
                       +S+EERE  Y  VRERIF    G++
Sbjct: 276 QIRVPLQDGRRSKSIEEREEEYQRVRERIFARETGQN 306

[Close]

BLAST of Cucsa.178680 vs. Swiss-Prot
Match: R3HD2_MOUSE (R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06
Identity = 42/157 (26.75%), Postives = 73/157 (46.50%), Query Frame = 1


Query: 10  EELAFLVKDNLPSKHLILSMEETFINFLHDETSSDGILELKPMDSYNRLLLHRLADIFGL 69
           E L   +K N   + ++L +E+  ++F++D  +     +   M SY+R+LLHR+A  FG+
Sbjct: 156 EFLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ--FKKFPQMTSYHRMLLHRVAAYFGM 215

Query: 70  GHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRKENSSASSTK 129
            H     G  + +++ +   + IP    S+ +   DE         +L+R + S      
Sbjct: 216 DHNVDQTG--KAVIINKTSSTRIPEQRFSEHI--KDEKNTEFQQRFILKRDDASMDRDDN 275

Query: 130 SSP--------QRSLEEREAAYLAVRERIFMTHVGED 159
                       +S+EERE  Y  VRERIF    G++
Sbjct: 276 QMRVPLQDGRRSKSIEEREEEYQRVRERIFARETGQN 306

[Close]

BLAST of Cucsa.178680 vs. Swiss-Prot
Match: ARP21_HUMAN (cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 2.1e-06
Identity = 46/153 (30.07%), Postives = 74/153 (48.37%), Query Frame = 1


Query: 10  EELAFLVKDNLPSKHLILSMEETFINFLHDETSSDGILELKPMDSYNRLLLHRLADIFGL 69
           E L   +K+N   + ++L ME+  I+F+ D  +++   +   M SY R+L+HR+A  FGL
Sbjct: 151 EFLINTLKNNSRDRMILLKMEQEIIDFIAD--NNNHYKKFPQMSSYQRMLVHRVAAYFGL 210

Query: 70  GHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRKENSSASSTK 129
            H     G  + +++ +   + IP     + L   DE    +    +L+R +NSS     
Sbjct: 211 DHNVDQTG--KSVIINKTSSTRIPEQRFCEHL--KDEKGEESQKRFILKR-DNSSIDKED 270

Query: 130 SSPQR-----------SLEEREAAYLAVRERIF 152
           +   R           S+EERE  Y  VRERIF
Sbjct: 271 NQQNRMHPFRDDRRSKSIEEREEEYQRVRERIF 296

[Close]

BLAST of Cucsa.178680 vs. TrEMBL
Match: A0A0A0LH15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074070 PE=4 SV=1)

HSP 1 Score: 614.8 bits (1584), Expect = 5.9e-173
Identity = 307/309 (99.35%), Postives = 309/309 (100.00%), Query Frame = 1


Query: 1   MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHDETSSDGILELKPMDSYNRLLL 60
           MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLH+ETSSDGILELKPMDSYNRLLL
Sbjct: 1   MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHNETSSDGILELKPMDSYNRLLL 60

Query: 61  HRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRK 120
           HRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRK
Sbjct: 61  HRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRK 120

Query: 121 ENSSASSTKSSPQRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRMIAHA 180
           ENSSASSTKSSPQRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRMIAHA
Sbjct: 121 ENSSASSTKSSPQRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRMIAHA 180

Query: 181 LGQRVNSLSEDTNCHQKEQGGVTNNAYIQARDSKLPDSTVEAINKTISRSDQCVNLKNEL 240
           LGQRVNSLSEDTNCHQKEQGGVTNNAYIQARDSKLPDSTVEAINKTISRSDQCVNLKNEL
Sbjct: 181 LGQRVNSLSEDTNCHQKEQGGVTNNAYIQARDSKLPDSTVEAINKTISRSDQCVNLKNEL 240

Query: 241 DKNCNPDVSLARGSTAAKMKPAKSYPKASHVDNEHLKREHLGAAKRMFSQALGKHCRRNE 300
           DKNCNPDVSLARGSTAAKMKPAKSYPKASHVDNEHLKREHLGAAKRMFSQALGKHCR+NE
Sbjct: 241 DKNCNPDVSLARGSTAAKMKPAKSYPKASHVDNEHLKREHLGAAKRMFSQALGKHCRKNE 300

Query: 301 SLQTRGEAD 310
           SLQTRGEAD
Sbjct: 301 SLQTRGEAD 309

[Close]

BLAST of Cucsa.178680 vs. TrEMBL
Match: W9S6Y8_9ROSA (R3H domain-containing protein 2 OS=Morus notabilis GN=L484_015106 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 9.3e-78
Identity = 165/313 (52.72%), Postives = 212/313 (67.73%), Query Frame = 1


Query: 1   MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHDETSSDGILELKPMDSYNRLLL 60
           M++ QFAMVEELAFLVKDNLP KHL+LS+EE  +NFL  +TSS GILEL+PM+SYNRLL+
Sbjct: 1   MSMTQFAMVEELAFLVKDNLPCKHLVLSVEEALVNFLETDTSSCGILELEPMNSYNRLLM 60

Query: 61  HRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRK 120
           HRLADIFG  H SVGEGD+RHL+LER PE+S+PSILVSDIL +YDEPQ  T  HQLLRR 
Sbjct: 61  HRLADIFGFSHESVGEGDDRHLILERCPETSVPSILVSDILGQYDEPQSPTTSHQLLRRT 120

Query: 121 ENSSAS--STKSSP--QRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRM 180
           + S  S  S   SP    SLEEREAAYLA RERIF   +G + EP++PKPR  P VARRM
Sbjct: 121 DASPVSLVSKTQSPLVPHSLEEREAAYLAARERIFSLDLGGEKEPVRPKPRSVPVVARRM 180

Query: 181 IAHALGQRVNSLSEDTNCHQKEQG-GVTNNAYIQARDSKLPDSTVEAINKTISRSDQCVN 240
           IAHALGQR+ S + DT         G T+   I+ +D    DS+++   + +  S +  +
Sbjct: 181 IAHALGQRITSCNHDTTHKDSSSSEGQTHELNIEGKDKTESDSSLQGYQEIVHLSGKSTS 240

Query: 241 LKNELDKNCNPDVSLARGSTAAKMKPAKSYPKA---SHVDNEHLKREHLGAAKRMFSQAL 300
           L ++  KN +   + +   T A  K ++    +   + ++ EH KREHLGAAKRMF+ AL
Sbjct: 241 LYSKERKNYHGTGASSPSDTKAPQKLSEKISTSIARNGMNREHYKREHLGAAKRMFAHAL 300

Query: 301 GKHCRRNESLQTR 306
           G     ++S + +
Sbjct: 301 GMQAGVSKSSELK 313

[Close]

BLAST of Cucsa.178680 vs. TrEMBL
Match: A0A061EYU8_THECC (Single-stranded nucleic acid binding R3H protein, putative isoform 2 OS=Theobroma cacao GN=TCM_025347 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 5.7e-75
Identity = 168/306 (54.90%), Postives = 202/306 (66.01%), Query Frame = 1


Query: 1   MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHDETSSDGILELKPMDSYNRLLL 60
           M+V QFAMVEELAFLVKDNLP KHL+LSMEE F+NFL D+TSSDGILEL+PM+SYNRLLL
Sbjct: 1   MSVTQFAMVEELAFLVKDNLPCKHLVLSMEEAFVNFLQDDTSSDGILELEPMNSYNRLLL 60

Query: 61  HRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRK 120
           HRLADIFG  H SVGEGD+RHLVLER PE+SIPSILVSDILW+ DEPQ  T    LL R+
Sbjct: 61  HRLADIFGFAHESVGEGDDRHLVLERCPETSIPSILVSDILWQCDEPQSLTTSRHLLVRE 120

Query: 121 ENSSASSTK-SSPQRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRMIAH 180
           E  + + T+  S + SLE REAAYLA RERIF   V E  EP+K KPR  P VARRMIAH
Sbjct: 121 EAPAVAKTELPSFELSLEAREAAYLAARERIFSMDVEEVREPVKEKPRTVPVVARRMIAH 180

Query: 181 ALGQRVNSLSEDTNCHQ-KEQGGVTNNAYIQARDSKLPDSTVEAINKTISRSDQCV---N 240
           ALGQ++NS S++ N    K+  G  N   I  +D       V+   +T +  D      N
Sbjct: 181 ALGQKINSSSQNVNARDFKDHEGQPNELNIHDKDE------VDNNLRTATYQDTVFVPGN 240

Query: 241 LKNELDKNCNPDVSLARGSTAAKMKPAKSYP--------KASHVDNEHLKREHLGAAKRM 294
             ++ + N +   +   G      KPA+  P          + V+ E+ K EHLGAAKRM
Sbjct: 241 AFSKANSNAHKHNASVVGKRNVSDKPAQKGPSDVRIPGRSRNRVNKEYSKEEHLGAAKRM 300

[Close]

BLAST of Cucsa.178680 vs. TrEMBL
Match: A0A061EY00_THECC (Single-stranded nucleic acid binding R3H protein, putative isoform 1 OS=Theobroma cacao GN=TCM_025347 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 5.7e-75
Identity = 168/306 (54.90%), Postives = 202/306 (66.01%), Query Frame = 1


Query: 1   MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHDETSSDGILELKPMDSYNRLLL 60
           M+V QFAMVEELAFLVKDNLP KHL+LSMEE F+NFL D+TSSDGILEL+PM+SYNRLLL
Sbjct: 1   MSVTQFAMVEELAFLVKDNLPCKHLVLSMEEAFVNFLQDDTSSDGILELEPMNSYNRLLL 60

Query: 61  HRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRK 120
           HRLADIFG  H SVGEGD+RHLVLER PE+SIPSILVSDILW+ DEPQ  T    LL R+
Sbjct: 61  HRLADIFGFAHESVGEGDDRHLVLERCPETSIPSILVSDILWQCDEPQSLTTSRHLLVRE 120

Query: 121 ENSSASSTK-SSPQRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRMIAH 180
           E  + + T+  S + SLE REAAYLA RERIF   V E  EP+K KPR  P VARRMIAH
Sbjct: 121 EAPAVAKTELPSFELSLEAREAAYLAARERIFSMDVEEVREPVKEKPRTVPVVARRMIAH 180

Query: 181 ALGQRVNSLSEDTNCHQ-KEQGGVTNNAYIQARDSKLPDSTVEAINKTISRSDQCV---N 240
           ALGQ++NS S++ N    K+  G  N   I  +D       V+   +T +  D      N
Sbjct: 181 ALGQKINSSSQNVNARDFKDHEGQPNELNIHDKDE------VDNNLRTATYQDTVFVPGN 240

Query: 241 LKNELDKNCNPDVSLARGSTAAKMKPAKSYP--------KASHVDNEHLKREHLGAAKRM 294
             ++ + N +   +   G      KPA+  P          + V+ E+ K EHLGAAKRM
Sbjct: 241 AFSKANSNAHKHNASVVGKRNVSDKPAQKGPSDVRIPGRSRNRVNKEYSKEEHLGAAKRM 300

[Close]

BLAST of Cucsa.178680 vs. TrEMBL
Match: A0A0D2RAT2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G260400 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 3.1e-73
Identity = 165/306 (53.92%), Postives = 199/306 (65.03%), Query Frame = 1


Query: 1   MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHDETSSDGILELKPMDSYNRLLL 60
           M++ QFAMVEELAFLVKDNLP KHL+LSMEE F+NFL D+TSSDGILEL+PM+SYNRLLL
Sbjct: 1   MSITQFAMVEELAFLVKDNLPCKHLVLSMEEAFMNFLQDDTSSDGILELEPMNSYNRLLL 60

Query: 61  HRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRK 120
           HRLADIFG  H S+GEGD+RHL+L+R PE+SIPSILVSDILW+ DEPQ  T    +L R 
Sbjct: 61  HRLADIFGFAHESIGEGDDRHLILQRCPETSIPSILVSDILWQCDEPQSLTASRHILTR- 120

Query: 121 ENSSASSTKSSP--QRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRMIA 180
           E ++    K+ P  + SLEEREAAYLA RERIF   VGE  EP+K KPR  P VARRMIA
Sbjct: 121 EGTTPVMEKNLPSFELSLEEREAAYLAARERIFAMDVGEVREPVKHKPRTVPIVARRMIA 180

Query: 181 HALGQRVNSLSEDTNCHQKEQGGVTNNAYIQARDSKLPDSTVE----AINKTISRSDQCV 240
           HALGQR+N  + D +    +  G T+   +   D    +S  E    A+ +     D C 
Sbjct: 181 HALGQRINLCNLDDSARDLKDWGKTDEPSVHDTDKVDNNSRTETHQDAVLEQRKPVDACS 240

Query: 241 NLKNELDKN-----CNPDVSLARGSTAAKMKPAKSYPKAS--HVDNEHLKREHLGAAKRM 294
              +   K+     C  +VS        K     S P  S   V+ E+ K EHLGAAKRM
Sbjct: 241 KANSNTSKHNTSVVCERNVS---DEQTEKRPTNASIPGRSRNRVNKEYSKEEHLGAAKRM 300

[Close]

BLAST of Cucsa.178680 vs. NCBI nr
Match: gi|449470259|ref|XP_004152835.1| (PREDICTED: R3H domain-containing protein 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 614.8 bits (1584), Expect = 8.5e-173
Identity = 307/309 (99.35%), Postives = 309/309 (100.00%), Query Frame = 1


Query: 1   MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHDETSSDGILELKPMDSYNRLLL 60
           MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLH+ETSSDGILELKPMDSYNRLLL
Sbjct: 1   MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHNETSSDGILELKPMDSYNRLLL 60

Query: 61  HRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRK 120
           HRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRK
Sbjct: 61  HRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRK 120

Query: 121 ENSSASSTKSSPQRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRMIAHA 180
           ENSSASSTKSSPQRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRMIAHA
Sbjct: 121 ENSSASSTKSSPQRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRMIAHA 180

Query: 181 LGQRVNSLSEDTNCHQKEQGGVTNNAYIQARDSKLPDSTVEAINKTISRSDQCVNLKNEL 240
           LGQRVNSLSEDTNCHQKEQGGVTNNAYIQARDSKLPDSTVEAINKTISRSDQCVNLKNEL
Sbjct: 181 LGQRVNSLSEDTNCHQKEQGGVTNNAYIQARDSKLPDSTVEAINKTISRSDQCVNLKNEL 240

Query: 241 DKNCNPDVSLARGSTAAKMKPAKSYPKASHVDNEHLKREHLGAAKRMFSQALGKHCRRNE 300
           DKNCNPDVSLARGSTAAKMKPAKSYPKASHVDNEHLKREHLGAAKRMFSQALGKHCR+NE
Sbjct: 241 DKNCNPDVSLARGSTAAKMKPAKSYPKASHVDNEHLKREHLGAAKRMFSQALGKHCRKNE 300

Query: 301 SLQTRGEAD 310
           SLQTRGEAD
Sbjct: 301 SLQTRGEAD 309

[Close]

BLAST of Cucsa.178680 vs. NCBI nr
Match: gi|778667822|ref|XP_011648991.1| (PREDICTED: R3H domain-containing protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 610.1 bits (1572), Expect = 2.1e-171
Identity = 307/310 (99.03%), Postives = 309/310 (99.68%), Query Frame = 1


Query: 1   MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHDETSS-DGILELKPMDSYNRLL 60
           MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLH+ETSS DGILELKPMDSYNRLL
Sbjct: 1   MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHNETSSSDGILELKPMDSYNRLL 60

Query: 61  LHRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRR 120
           LHRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRR
Sbjct: 61  LHRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRR 120

Query: 121 KENSSASSTKSSPQRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRMIAH 180
           KENSSASSTKSSPQRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRMIAH
Sbjct: 121 KENSSASSTKSSPQRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRMIAH 180

Query: 181 ALGQRVNSLSEDTNCHQKEQGGVTNNAYIQARDSKLPDSTVEAINKTISRSDQCVNLKNE 240
           ALGQRVNSLSEDTNCHQKEQGGVTNNAYIQARDSKLPDSTVEAINKTISRSDQCVNLKNE
Sbjct: 181 ALGQRVNSLSEDTNCHQKEQGGVTNNAYIQARDSKLPDSTVEAINKTISRSDQCVNLKNE 240

Query: 241 LDKNCNPDVSLARGSTAAKMKPAKSYPKASHVDNEHLKREHLGAAKRMFSQALGKHCRRN 300
           LDKNCNPDVSLARGSTAAKMKPAKSYPKASHVDNEHLKREHLGAAKRMFSQALGKHCR+N
Sbjct: 241 LDKNCNPDVSLARGSTAAKMKPAKSYPKASHVDNEHLKREHLGAAKRMFSQALGKHCRKN 300

Query: 301 ESLQTRGEAD 310
           ESLQTRGEAD
Sbjct: 301 ESLQTRGEAD 310

[Close]

BLAST of Cucsa.178680 vs. NCBI nr
Match: gi|659082547|ref|XP_008441899.1| (PREDICTED: uncharacterized protein LOC103485903 isoform X2 [Cucumis melo])

HSP 1 Score: 567.0 bits (1460), Expect = 2.0e-158
Identity = 290/311 (93.25%), Postives = 297/311 (95.50%), Query Frame = 1


Query: 1   MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHDETSSDGILELKPMDSYNRLLL 60
           MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHDETSSDGILELKPMDSYNRLLL
Sbjct: 1   MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHDETSSDGILELKPMDSYNRLLL 60

Query: 61  HRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRK 120
           HRLADIFGLGHVS GEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRK
Sbjct: 61  HRLADIFGLGHVSAGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRK 120

Query: 121 ENSSASSTKSSPQRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRMIAHA 180
           ENSSASS KSSPQRSLEERE AYLAVRERIFMTH+GEDNEPLKPKPRCDPAVARRMIAHA
Sbjct: 121 ENSSASSAKSSPQRSLEERETAYLAVRERIFMTHIGEDNEPLKPKPRCDPAVARRMIAHA 180

Query: 181 LGQRVNSLSEDTNCHQKEQGGVTNNAYIQARDSKLPDSTVEAINKTISRSDQCVNLKNEL 240
           LGQRVNS  EDTNCH+K Q GV NNAYIQARDSKLP+STVEAINKTIS+SDQC+NLKNE 
Sbjct: 181 LGQRVNSFPEDTNCHRKVQ-GVANNAYIQARDSKLPNSTVEAINKTISQSDQCMNLKNES 240

Query: 241 DKNCNPDVSLARGSTAAKMKPAKSYPKASH-VDNEHLKREHLGAAKRMFSQALGKHCRRN 300
           DKNCNP+VSLARGSTAAKMK  KS PKASH VDNEHLKREHLGAAKRMFSQALGKHCR+N
Sbjct: 241 DKNCNPNVSLARGSTAAKMKLDKSSPKASHDVDNEHLKREHLGAAKRMFSQALGKHCRKN 300

Query: 301 ESLQTR-GEAD 310
           ESLQTR GEAD
Sbjct: 301 ESLQTRCGEAD 310

[Close]

BLAST of Cucsa.178680 vs. NCBI nr
Match: gi|659082545|ref|XP_008441898.1| (PREDICTED: uncharacterized protein LOC103485903 isoform X1 [Cucumis melo])

HSP 1 Score: 562.4 bits (1448), Expect = 5.0e-157
Identity = 290/312 (92.95%), Postives = 297/312 (95.19%), Query Frame = 1


Query: 1   MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHDETSS-DGILELKPMDSYNRLL 60
           MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHDETSS DGILELKPMDSYNRLL
Sbjct: 1   MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHDETSSSDGILELKPMDSYNRLL 60

Query: 61  LHRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRR 120
           LHRLADIFGLGHVS GEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRR
Sbjct: 61  LHRLADIFGLGHVSAGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRR 120

Query: 121 KENSSASSTKSSPQRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRMIAH 180
           KENSSASS KSSPQRSLEERE AYLAVRERIFMTH+GEDNEPLKPKPRCDPAVARRMIAH
Sbjct: 121 KENSSASSAKSSPQRSLEERETAYLAVRERIFMTHIGEDNEPLKPKPRCDPAVARRMIAH 180

Query: 181 ALGQRVNSLSEDTNCHQKEQGGVTNNAYIQARDSKLPDSTVEAINKTISRSDQCVNLKNE 240
           ALGQRVNS  EDTNCH+K Q GV NNAYIQARDSKLP+STVEAINKTIS+SDQC+NLKNE
Sbjct: 181 ALGQRVNSFPEDTNCHRKVQ-GVANNAYIQARDSKLPNSTVEAINKTISQSDQCMNLKNE 240

Query: 241 LDKNCNPDVSLARGSTAAKMKPAKSYPKASH-VDNEHLKREHLGAAKRMFSQALGKHCRR 300
            DKNCNP+VSLARGSTAAKMK  KS PKASH VDNEHLKREHLGAAKRMFSQALGKHCR+
Sbjct: 241 SDKNCNPNVSLARGSTAAKMKLDKSSPKASHDVDNEHLKREHLGAAKRMFSQALGKHCRK 300

Query: 301 NESLQTR-GEAD 310
           NESLQTR GEAD
Sbjct: 301 NESLQTRCGEAD 311

[Close]

BLAST of Cucsa.178680 vs. NCBI nr
Match: gi|1009118129|ref|XP_015875696.1| (PREDICTED: uncharacterized protein LOC107412430 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 303.9 bits (777), Expect = 3.2e-79
Identity = 168/319 (52.66%), Postives = 213/319 (66.77%), Query Frame = 1


Query: 1   MTVAQFAMVEELAFLVKDNLPSKHLILSMEETFINFLHDETSSDGILELKPMDSYNRLLL 60
           M++ QFAMVEELA LVKDNLP KHL+LS+EE  INFL  +TSSDG+LEL+PM+SYNRLLL
Sbjct: 1   MSMTQFAMVEELASLVKDNLPCKHLVLSVEEVLINFLQTDTSSDGVLELEPMNSYNRLLL 60

Query: 61  HRLADIFGLGHVSVGEGDNRHLVLERYPESSIPSILVSDILWEYDEPQMSTIPHQLLRRK 120
           HRLADIFG  H SVGEGD+RHL+LER PE+SIPSILVSDILW+YD+PQ S + HQLL+R 
Sbjct: 61  HRLADIFGFSHESVGEGDDRHLILERCPETSIPSILVSDILWQYDDPQSSAMTHQLLKRT 120

Query: 121 ENSSASSTKS-SPQRSLEEREAAYLAVRERIFMTHVGEDNEPLKPKPRCDPAVARRMIAH 180
           E S    TKS S Q SLEEREAAYLA R+RIF   +GE+ EP+K KPR  P VARRMIAH
Sbjct: 121 ETSPVLKTKSPSVQHSLEEREAAYLAARQRIFSMDLGEEKEPVKQKPRSVPVVARRMIAH 180

Query: 181 ALGQRVNSLSEDTNCHQ-KEQGGVTNNAYIQARDSKLPDSTVEAINKTISRSDQCVNLKN 240
           ALGQR++S+++DT        G  T+    Q +D    + T +   +++S S       +
Sbjct: 181 ALGQRISSINQDTALKDFSGSGEETDEMKAQDKDKIDLNLTQKTFQESLSLSGTNTKSYD 240

Query: 241 ELDKNCNPDVSLARGSTAAKMKPAKSYPKA----------SHVDNEHLKREHLGAAKRMF 300
           E+ KN     + ++    A  K A+    +          ++V+ +H KR+HLGAAKRMF
Sbjct: 241 EVKKNEQSTCASSQSEWKAPQKQAEKVSSSVSISRSGRDRNNVNEDHHKRQHLGAAKRMF 300

Query: 301 SQALGKHCRRNESLQTRGE 308
           + ALG    +   L    E
Sbjct: 301 AHALGMQSGKESFLSKCSE 319

The following BLAST results are available for this feature:

BLAST of Cucsa.178680 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ARP21_MOUSE	1.2e-06	30.14	cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2	[more]
R3HD2_BOVIN	1.6e-06	26.75	R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1	[more]
R3HD2_MOUSE	1.6e-06	26.75	R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=1 SV=2	[more]
ARP21_HUMAN	2.1e-06	30.07	cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2	[more]

BLAST of Cucsa.178680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH15_CUCSA	5.9e-173	99.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074070 PE=4 SV=1	[more]
W9S6Y8_9ROSA	9.3e-78	52.72	R3H domain-containing protein 2 OS=Morus notabilis GN=L484_015106 PE=4 SV=1	[more]
A0A061EYU8_THECC	5.7e-75	54.90	Single-stranded nucleic acid binding R3H protein, putative isoform 2 OS=Theobrom...	[more]
A0A061EY00_THECC	5.7e-75	54.90	Single-stranded nucleic acid binding R3H protein, putative isoform 1 OS=Theobrom...	[more]
A0A0D2RAT2_GOSRA	3.1e-73	53.92	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G260400 PE=4 SV=1	[more]

BLAST of Cucsa.178680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449470259\|ref\|XP_004152835.1\|	8.5e-173	99.35	PREDICTED: R3H domain-containing protein 1 isoform X2 [Cucumis sativus]	[more]
gi\|778667822\|ref\|XP_011648991.1\|	2.1e-171	99.03	PREDICTED: R3H domain-containing protein 1 isoform X1 [Cucumis sativus]	[more]
gi\|659082547\|ref\|XP_008441899.1\|	2.0e-158	93.25	PREDICTED: uncharacterized protein LOC103485903 isoform X2 [Cucumis melo]	[more]
gi\|659082545\|ref\|XP_008441898.1\|	5.0e-157	92.95	PREDICTED: uncharacterized protein LOC103485903 isoform X1 [Cucumis melo]	[more]
gi\|1009118129\|ref\|XP_015875696.1\|	3.2e-79	52.66	PREDICTED: uncharacterized protein LOC107412430 isoform X2 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001374	R3H_dom
IPR024771	SUZ

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.178680.1	Cucsa.178680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001374	R3H domain	GENE3D	G3DSA:3.30.1370.50		coord: 26..94 score: 2.3
IPR001374	R3H domain	PFAM	PF01424	R3H	coord: 26..85 score: 9.2
IPR001374	R3H domain	SMART	SM00393	R3H_4	coord: 10..87 score: 1.
IPR001374	R3H domain	PROFILE	PS51061	R3H	coord: 23..88 score: 17
IPR001374	R3H domain	unknown	SSF82708	R3H domain	coord: 14..121 score: 2.09
IPR024771	SUZ domain	PFAM	PF12752	SUZ	coord: 117..153 score: 2.3
IPR024771	SUZ domain	PROFILE	PS51673	SUZ	coord: 91..155 score: 10
None	No IPR available	PANTHER	PTHR15672	CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN	coord: 1..223 score: 3.6E
None	No IPR available	PANTHER	PTHR15672:SF16	SUBFAMILY NOT NAMED	coord: 1..223 score: 3.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.178680	Cla005742	Watermelon (97103) v1	cgywmB341
Cucsa.178680	Csa2G074070	Cucumber (Chinese Long) v2	cgycuB274
Cucsa.178680	MELO3C008758	Melon (DHL92) v3.5.1	cgymeB320
Cucsa.178680	ClCG11G010990	Watermelon (Charleston Gray)	cgywcgB319
Cucsa.178680	CSPI02G07060	Wild cucumber (PI 183967)	cgycpiB284
Cucsa.178680	CmaCh12G009480	Cucurbita maxima (Rimu)	cgycmaB0509
Cucsa.178680	CmoCh12G009480	Cucurbita moschata (Rifu)	cgycmoB0509
Cucsa.178680	Lsi11G008490	Bottle gourd (USVL1VR-Ls)	cgylsiB300
Cucsa.178680	Cp4.1LG07g07910	Cucurbita pepo (Zucchini)	cgycpeB0492
Cucsa.178680	MELO3C008758.2	Melon (DHL92) v3.6.1	cgymedB315
Cucsa.178680	CsaV3_2G009500	Cucumber (Chinese Long) v3	cgycucB287
Cucsa.178680	Cla97C11G217140	Watermelon (97103) v2	cgywmbB323
Cucsa.178680	Carg22657	Silver-seed gourd	carcgyB0005

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.178680	Wax gourd	cgywgoB366
Cucsa.178680	Cucurbita maxima (Rimu)	cgycmaB0510
Cucsa.178680	Cucurbita moschata (Rifu)	cgycmoB0510
Cucsa.178680	Cucurbita pepo (Zucchini)	cgycpeB0491
Cucsa.178680	Silver-seed gourd	carcgyB0204