Cucsa.177370 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.177370
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRad23 UV excision repair protein family
Locationscaffold01225 : 1394911 .. 1399795 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAAAAGCCAAGTGCCCAACTCACCGGTCGCGGTCTTCTTCCTACCAAATCTAGGGTTCTCTTCGATCTCTTTCCACTGCGTTTCAGGTTCTTTCCTCCTGAAACGCTGTCGTTTCTGTTCCTTCTCCATCTCCCCCCTTCTAGTTATTCGTCGAAATGAAGCTCACTGTCAAGACTCTCAAGGGAAGCCACTTCGAAATTAGGGTTCAGCTCACCGACACCGTAAGTTTTCACATTTCTATTTCTCGTTTTTTCCCCAACATTCTTTCTTGATGATATTTGGTTTTCTTTTTTCCAATTTATTAATGTAGCCGAGTACGCAAGCATTTACCCAGCTGGCAATATTGAGCTTAGTTTAATTGTTTTCTTTAATATAATTGGAACAGTGTGAATGTACTGGAGGAATTTTGTGGAATTAGAAGGATTTTGAAATTTGGGGCTCTCATGTTACTTAATCTGGAAGTTGCTTTCATTTCTGAACGACGATCATTATTTTTTtAAAAATATAAATTATTTGAATTGTTCGTGATCTGCTGGATTCGCATTGTTTGCACAGGCTGGGGGAGTTTAAGATATCGTGTAGTGCGCATTTCTTGTTGTGACGTTCACCCAGTTTTTGTAAATCTAGAAAGTTCAAAAATGATTTTAATCCTTTTATTTGAAACCCAAGGGGTGATTTTAAGCTCTTTATTTTGTTTGGAACGTGGAAGTTTTGAAATGAATGTAATTAAAACGTTGCTTGGATAGTAGCTGGGAAAAGAAGATTAATTGAATGAAAATTGTACTATTATGGGCTTTGTCTTGATTTATTAAAAGAAAATTAAAATATGTCAAGGTTAATTAAGTAATTTACCTCCAAATTCTATGAACTATTCAAAATCCATTCCATTTCTGTTAGAAATTTTTTAACGTAAAAGCAAGATAAATCATTCTCTTTTATACGATGAAAAACATCATAATTCCTTTAAAATATGTCATGTTTTGAAATCCTTCGAAGTTTTGAGCGACCAACCAAATTATAGTTTTGTTTTTtGTTTTTTGTTTTTtGAAATTTCTAATTGTAAAATTTATGGTGTAGGTGATGGCTGTCAAGAAAAATATTGAAGATGTACAAGGAAAGGATAATTATCCTTGTGGTCAACAATTATTGATACATAATGGCAAAGTTCTGAAAGATGAGAGTACACTGGCAGAAAACAAAGTATCTGAAGAAGGTTTTCTTGTTGTCATGCTCAGCAAGGTGTCCTTGGTCTTATAATTTTCTTAATGGAAGAAGCACTAAAGACATGTTTTtATTTTGAATTTTAATGAATGGCTGCAATATCAAATATGGTTATGCTCAATTGTATACATTTGCTTCTTCTGCAGAGCAAAACATCAGTCTCAGCAGGGCAGTCGTCAACTCAGGTAATGTTGACCTTTTCTTGCTGCAAATTGTTTATGATCAATTAATGGTAACTGTCTCTGGTTCCTGTTTATTGCAGCCTGCTCAAAACCCCCCTGTAGCTCAACCAGTTTTAAGTTCAACTCCTGCTGCCCAAGTTACTCCATCACCGACTCCTGCTGCCCAAGTTACTCCATCACCGACTCCTGCACCTCAAGCTCCCACTCAAGCACCCACTCAAGCACCATCATCGTTAGTTCTTCAAGAATGATCTTCAGTATGCATTTTCCTTTGATCGGTTGAGTAACTAAAATTCATATGCATTTTTTGCTCTTGGTTTTCAGTGCCCCGAAGAACACTACGTCTACTTCAGAAAGGGTGACAGATAAGTATGGCTTCTATTTCATATGCCTATTTTTTAACTTCAAGAGGCTTGAATTGGTTAGTAAATCACATTCTATTTCATAATACTAAATCAATGCTACAATATAACGTATGTCAAATCTGATATAAGCTACAGACCGGATGCACTTTATAGGAGTTTTTGATTATTAAGGGACGGACAGCTGAAATCAGAAAGCTTTGAGCAATATGTTTCCTCCTGTTTTCCTTTAGAGAAAGTTAGTCATTTTTTtGGGGGAATCATTTGCAGTGTACAAACCGATACCTATGGTCAAGCTGCTTCAAATTTGGTTGCTGGCAATAACCTGGAACAGACCGTTCAACAACTAATGGATATGGGTGGTGGCAACTGGGACAGAGAAACAGTTGTTCGTGCATTGAGAGCTGCTTATAACAATCCAGAGCGAGCAGTGGATTACTTGTACTCTGTATGCCTTAGTTCTACTGTGTGAATTCTCTTGTCTGGATGTTTCCAGTCACTAATGGTGTTTTTTTtGGTTTAGGGTATTCCGGAATCTGCAGAAGTTGCAGTGCCAGTGGGTCGTTTTGGTTCTGGTCAAGCCACTGAAACTGATGCATCTGTTCCTGCACCTGTTTCTGGAGCACCCAACACAGCCCCCTTGAATATGTTTCCTCAGGTAAGCTTTGATGCATGAAAAAGTCGTTTGTTTGTTTGCTCACATTCAGTTATTTTTAATTGGGCTGCAATCATGCAGGAGGCACTTTCTGCTGGCAGTGGTGGTGGCGGTGGCAACCTTGGATCTCTTGAATTCCTTAGAAACAATCCACAGGTAACTAGTACAACATCATCATTTATGGGGTTTTCTTGATTGATTAGCTTTTTAGCTTTCTGTACGCATTGAGTTTAGAAATCCGCACTTTGAAGTCCTTTCTCACCTAATGGTTGTGTTAGTTTTGCATCTTTTTCACACCCTTTCACGTTAGATGCATCCATTAAAAGTCACAAACGCTTGATTTAAAAGTTCACATATGGACTATATTAATCCATTTCATATCATTGCTTTCGATGTATCACTTACAGAGTCACAAAATCTTGTTTTGCTTTATTTTACATGGACTATGGCGTTGTATAGAATTAAATGGGAAGTACTTACTGAATGGGGTTTTCTATCATTGTGCATATTCTAGTTCCAAGCCCTGCGGACGATGGTGCATACAAACCCTCAAATCTTACAGGTTCACACATCCTTCTGCTTTACAATTTACTTGGTTGTTATACTTATGGTTTAGCCAAGAGTTCAATCTTTTGCTTCTGATGGCAGCCCATGCTTCAAGAACTTGGAAAGCAGAATCCCCAGCTTTTGAGACTCATTCAGGATCATCATGCAGAGTTCCTTCAGCTAATTAATGAACCCGTTGACAATTTCGAGGGGTGAGTCTTACACTACTGTCACCTGGTCAATCTTAAATCTTGTTCTTTTGTTAATTTGAAACCTCCTAGTTCTTCAGTTTGTTATTTGTGATTGATCACGAACAGTGTTTCTGAATGCCCAAAGCGCAATGGCCCTCTAGAGCCTAGGCGCAAGGCGCATGCTTTGTTTTTCTTTTtGTGCGTGTCATGAAAaTACTGCATTTTTTGAAGAGGATACGAGTCTCACTATTATTAATATTGAAAATAAAGAGACAAAGCTCAATGTACATAAGGGTTATATAAGAGCAATAGGAGGGGATGAAAATACTGCATTAAAAAGAAAAGACAGTTGAAGTGGAAATATGGAAAAGAAAATGACCCCAAACACAATAAATTTTGCATCTAGGCTTGGTTAGTAAACTTGATTCTTTTAGTTAATAAAGAAGGAAAACCCTTAATTATTGCTATTTTTTtAAATAATGAATAGGGCCTTGGGGCTTTGCAAATGGCACGTGGTTGAGGTGCACCATATTTTGTGAGCCTTGCCTTTCCAAGGTGAGGTGCTAGACCTATGCCTTGAGACTAGGTGCACCTAAACGCATGTGTGAGAGGGCTTTTTAAAACACTGATCACTGACATATAAGATGGCCACTGCATAGATAGCCTTTCTAGTTTTTCCATCATCAAATGCTCAGTGCTTCTGTTGTAGGTCCCTGCGTGGGATAATTATAGGTAATCAGGTCATGTGTAGTAATGGAAAGATAGTTTTTCCTTATTGCTCTTGATCTCCTATTAATGTTTAACCTTGTGTCAAACTACAACATCCATTTCCGCCAACTTGGCATTCCACCAGCACGGAATTAGTCAACACCAAAAGCACAAAATTCAATATTGTTGCACAGAATGTGCCTATCTGGATGATTTATGTGATTTATTTATTCTCTTGCTTAAAAGACTACAAATTGAGTCACCTTTTTTATCTAGTTGATAATGCCATAAATGGTCATTTGTAGAGCAAGTCAACCTAAGCATATAAGGTTATATAACCTCGACCACAAGTTGGTTGTGGTCAAAGTTTTGAATCTCCTAGCACTACCTCTTGAATTAGAAAAAGGAAAACAATGTGCCATCTGTGGAACAAGAACTATTTGTGGGTCTGATTTACCGGAGAGGACGCTCACATCGATTATTATTTTtGTTGAATGAACTTCTGTCATCACAGCATCTATCTATAGAACTATAAGCTATGTTTtCTTTTCAGAGAAATGTTTGAACAGGCTGAGCCGGACATGCCTCATGCCATTAATGTCACTCCAGCCGAACAGGCAGCCATCGAAAGGGTACGAACTCCTTTATATTCCTTGAGTGCGTTTTTtGTTTTCCATCTTCAAACTGGATCTCTGTGGTTAAATCCCTAATCCCTTTACTACTTGTTCCCTTATGTAGCTCGAGGCAATGGGATTTGATAGAGCATTGGTTATCGAGGCATTTTTGGCATGTGATCGCAATGAGGAACTAGCAGCTAACTACTTACTGGAGAATTCTGGAGATTTTGATGATTAACAAACGAACAATTAATGTTAACCACTCTGGATTCATTATTTTTGGTGCTGAGGTGAATTGATACCCTTTTCAGCATTCTTCACTTTCTGAGTCTTCTTTGCATTGCATTTTACATACTCTACTAATAAATAGGAAAATTAATTCTTCAAGTATGGTCTTCCCGA

mRNA sequence

GCAAAAGCCAAGTGCCCAACTCACCGGTCGCGGTCTTCTTCCTACCAAATCTAGGGTTCTCTTCGATCTCTTTCCACTGCGTTTCAGGTTCTTTCCTCCTGAAACGCTGTCGTTTCTGTTCCTTCTCCATCTCCCCCCTTCTAGTTATTCGTCGAAATGAAGCTCACTGTCAAGACTCTCAAGGGAAGCCACTTCGAAATTAGGGTTCAGCTCACCGACACCGTGATGGCTGTCAAGAAAAATATTGAAGATGTACAAGGAAAGGATAATTATCCTTGTGGTCAACAATTATTGATACATAATGGCAAAGTTCTGAAAGATGAGAGTACACTGGCAGAAAACAAAGTATCTGAAGAAGGTTTTCTTGTTGTCATGCTCAGCAAGAGCAAAACATCAGTCTCAGCAGGGCAGTCGTCAACTCAGCCTGCTCAAAACCCCCCTGTAGCTCAACCAGTTTTAAGTTCAACTCCTGCTGCCCAAGTTACTCCATCACCGACTCCTGCTGCCCAAGTTACTCCATCACCGACTCCTGCACCTCAAGCTCCCACTCAAGCACCCACTCAAGCACCATCATCTGCCCCGAAGAACACTACGTCTACTTCAGAAAGGGTGACAGATAATGTACAAACCGATACCTATGGTCAAGCTGCTTCAAATTTGGTTGCTGGCAATAACCTGGAACAGACCGTTCAACAACTAATGGATATGGGTGGTGGCAACTGGGACAGAGAAACAGTTGTTCGTGCATTGAGAGCTGCTTATAACAATCCAGAGCGAGCAGTGGATTACTTGTACTCTGGTATTCCGGAATCTGCAGAAGTTGCAGTGCCAGTGGGTCGTTTTGGTTCTGGTCAAGCCACTGAAACTGATGCATCTGTTCCTGCACCTGTTTCTGGAGCACCCAACACAGCCCCCTTGAATATGTTTCCTCAGGAGGCACTTTCTGCTGGCAGTGGTGGTGGCGGTGGCAACCTTGGATCTCTTGAATTCCTTAGAAACAATCCACAGTTCCAAGCCCTGCGGACGATGGTGCATACAAACCCTCAAATCTTACAGCCCATGCTTCAAGAACTTGGAAAGCAGAATCCCCAGCTTTTGAGACTCATTCAGGATCATCATGCAGAGTTCCTTCAGCTAATTAATGAACCCGTTGACAATTTCGAGGGAGAAATGTTTGAACAGGCTGAGCCGGACATGCCTCATGCCATTAATGTCACTCCAGCCGAACAGGCAGCCATCGAAAGGCTCGAGGCAATGGGATTTGATAGAGCATTGGTTATCGAGGCATTTTTGGCATGTGATCGCAATGAGGAACTAGCAGCTAACTACTTACTGGAGAATTCTGGAGATTTTGATGATTAACAAACGAACAATTAATGTTAACCACTCTGGATTCATTATTTTTGGTGCTGAGGTGAATTGATACCCTTTTCAGCATTCTTCACTTTCTGAGTCTTCTTTGCATTGCATTTTACATACTCTACTAATAAATAGGAAAATTAATTCTTCAAGTATGGTCTTCCCGA

Coding sequence (CDS)

ATGAAGCTCACTGTCAAGACTCTCAAGGGAAGCCACTTCGAAATTAGGGTTCAGCTCACCGACACCGTGATGGCTGTCAAGAAAAATATTGAAGATGTACAAGGAAAGGATAATTATCCTTGTGGTCAACAATTATTGATACATAATGGCAAAGTTCTGAAAGATGAGAGTACACTGGCAGAAAACAAAGTATCTGAAGAAGGTTTTCTTGTTGTCATGCTCAGCAAGAGCAAAACATCAGTCTCAGCAGGGCAGTCGTCAACTCAGCCTGCTCAAAACCCCCCTGTAGCTCAACCAGTTTTAAGTTCAACTCCTGCTGCCCAAGTTACTCCATCACCGACTCCTGCTGCCCAAGTTACTCCATCACCGACTCCTGCACCTCAAGCTCCCACTCAAGCACCCACTCAAGCACCATCATCTGCCCCGAAGAACACTACGTCTACTTCAGAAAGGGTGACAGATAATGTACAAACCGATACCTATGGTCAAGCTGCTTCAAATTTGGTTGCTGGCAATAACCTGGAACAGACCGTTCAACAACTAATGGATATGGGTGGTGGCAACTGGGACAGAGAAACAGTTGTTCGTGCATTGAGAGCTGCTTATAACAATCCAGAGCGAGCAGTGGATTACTTGTACTCTGGTATTCCGGAATCTGCAGAAGTTGCAGTGCCAGTGGGTCGTTTTGGTTCTGGTCAAGCCACTGAAACTGATGCATCTGTTCCTGCACCTGTTTCTGGAGCACCCAACACAGCCCCCTTGAATATGTTTCCTCAGGAGGCACTTTCTGCTGGCAGTGGTGGTGGCGGTGGCAACCTTGGATCTCTTGAATTCCTTAGAAACAATCCACAGTTCCAAGCCCTGCGGACGATGGTGCATACAAACCCTCAAATCTTACAGCCCATGCTTCAAGAACTTGGAAAGCAGAATCCCCAGCTTTTGAGACTCATTCAGGATCATCATGCAGAGTTCCTTCAGCTAATTAATGAACCCGTTGACAATTTCGAGGGAGAAATGTTTGAACAGGCTGAGCCGGACATGCCTCATGCCATTAATGTCACTCCAGCCGAACAGGCAGCCATCGAAAGGCTCGAGGCAATGGGATTTGATAGAGCATTGGTTATCGAGGCATTTTTGGCATGTGATCGCAATGAGGAACTAGCAGCTAACTACTTACTGGAGAATTCTGGAGATTTTGATGATTAA

Protein sequence

MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVTPSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD*
Homology
[Close]
BLAST of Cucsa.177370 vs. Swiss-Prot
Match: RD23B_ARATH (Ubiquitin receptor RAD23b OS=Arabidopsis thaliana GN=RAD23B PE=1 SV=3)

HSP 1 Score: 513.8 bits (1322), Expect = 1.6e-144
Identity = 273/404 (67.57%), Postives = 319/404 (78.96%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV  +DT+MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQ-VTPSPTPAAQV 120
           ENKV+EEGFLVVMLSKSK+  SAGQ+S Q +    V+QPV ++T + +   PS T ++ V
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSS---VSQPVSATTSSTKPAAPSTTQSSPV 120

Query: 121 TPSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQ 180
             SP PA + P                          QTDTYGQAAS LV+G++LEQ VQ
Sbjct: 121 PASPIPAQEQPA------------------------AQTDTYGQAASTLVSGSSLEQMVQ 180

Query: 181 QLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDA 240
           Q+M+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIP++AEVAVPV      Q   + A
Sbjct: 181 QIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGA 240

Query: 241 SVPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQIL 300
           +  AP SG PN++PL++FPQE ++A    G G+LG+LEFLRNN QFQ LRTMVH+NPQIL
Sbjct: 241 APVAPASGGPNSSPLDLFPQETVAA---AGSGDLGTLEFLRNNDQFQQLRTMVHSNPQIL 300

Query: 301 QPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD--NFEGEMFEQAEPDMPHAINVTPAE 360
           QPMLQELGKQNPQLLRLIQ++ AEFLQL+NEP +  + EG+MF+Q E +MPHAINVTPAE
Sbjct: 301 QPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAE 360

Query: 361 QAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 402
           Q AI+RLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 QEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 371

[Close]
BLAST of Cucsa.177370 vs. Swiss-Prot
Match: RD23A_ARATH (Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana GN=RAD23A PE=1 SV=2)

HSP 1 Score: 475.7 bits (1223), Expect = 5.0e-133
Identity = 258/404 (63.86%), Postives = 306/404 (75.74%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV  TDT+MAVKKNIED Q KDNYPCGQQLLIHNGKVLKDE+TL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVT 120
           ENKV+EEGFLVVMLSKSKT+ SAG SSTQP          +SST  A   PS T +  V 
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQPTS---TTTSTISSTTLA--APSTTQSIAVP 120

Query: 121 PS-PTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQ 180
            S  TP  + PT                         Q+DTYGQAAS LV+G+++EQ VQ
Sbjct: 121 ASNSTPVQEQPT------------------------AQSDTYGQAASTLVSGSSIEQMVQ 180

Query: 181 QLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDA 240
           Q+M+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIPE+  V +P     SG  +  + 
Sbjct: 181 QIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPET--VTIPATNL-SGVGSGREL 240

Query: 241 SVPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQIL 300
           + P P SG PN++PL++FPQEA+   S   GG+LG+LEFLR N QFQ LR+MV++NPQIL
Sbjct: 241 TAPPP-SGGPNSSPLDLFPQEAV---SDAAGGDLGTLEFLRGNDQFQQLRSMVNSNPQIL 300

Query: 301 QPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEG--EMFEQAEPDMPHAINVTPAE 360
           QPMLQELGKQNPQLLRLIQ++ AEFLQL+NEP +  +G  ++F+Q + +MPH++NVTP E
Sbjct: 301 QPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEE 360

Query: 361 QAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 402
           Q +IERLEAMGFDRA+VIEAFL+CDRNEELAANYLLE+S DF+D
Sbjct: 361 QESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFED 368

[Close]
BLAST of Cucsa.177370 vs. Swiss-Prot
Match: RD23C_ARATH (Ubiquitin receptor RAD23c OS=Arabidopsis thaliana GN=RAD23C PE=1 SV=2)

HSP 1 Score: 411.4 bits (1056), Expect = 1.2e-113
Identity = 233/426 (54.69%), Postives = 289/426 (67.84%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MK+ VKTLKG+HFEI V+  D+V+ VKKNIE VQG D YP  +Q+LIH GKVLKDE+T+ 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVSEEGFLVVMLSKSK------TSVSAGQS---STQPAQNPPVAQPVLSSTPAAQVTP 120
           ENKV+E  F+V+M++KSK      +S SAG S   S  P+ + P   P   ++ +A V P
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120

Query: 121 SPTPAAQVTPSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNV----QTDTYGQAASN 180
           +PT      P+PTPAP A T+  T         T S+S    D+     Q D YGQAASN
Sbjct: 121 APTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAASN 180

Query: 181 LVAGNNLEQTVQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVG 240
           L AG+NLE T+QQ++DMGGG WDRETVV ALRAA+NNPERAV+YLY+GIPE AEV  PV 
Sbjct: 181 LAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVP-PVA 240

Query: 241 R--FGSGQ----ATETDASVPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRN 300
           R    +GQ      +T     AP SG PN  PL++FPQ   + G   G    G+L+FLRN
Sbjct: 241 RPPASAGQPANPPAQTQQPAAAPASG-PNANPLDLFPQGLPNVGGNPGA---GTLDFLRN 300

Query: 301 NPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD------NF 360
           + QFQALR MV  NPQ+LQPMLQELGKQNP L+RLIQDH A+FL+LINEPV+      N 
Sbjct: 301 SQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNL 360

Query: 361 EGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLEN 402
            G+M   A    P AI VT  E+ AIERLEAMGF+RALV+E F AC++NEELAANYLL++
Sbjct: 361 LGQM--AAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDH 419

[Close]
BLAST of Cucsa.177370 vs. Swiss-Prot
Match: RD23D_ARATH (Ubiquitin receptor RAD23d OS=Arabidopsis thaliana GN=RAD23D PE=1 SV=2)

HSP 1 Score: 401.7 bits (1031), Expect = 9.1e-111
Identity = 223/407 (54.79%), Postives = 272/407 (66.83%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MK+ VKTL GS+FEI V+  D V  VK  IE V+G + YP  +Q+LIH GKVLKDE+TL 
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVT 120
           EN V E  F+V+MLSK+K S S   +++ PA  P   QP   +TP               
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGASTASAPA--PSATQPQTVATPQVS------------ 120

Query: 121 PSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQ 180
                AP A    PT   ++A    T+ S      VQTD YGQAASNLVAG  LE TVQQ
Sbjct: 121 -----APTASVPVPTSGTATAAAPATAAS------VQTDVYGQAASNLVAGTTLESTVQQ 180

Query: 181 LMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQ------A 240
           ++DMGGG+WDR+TVVRALRAA+NNPERAV+YLYSGIP  AE+        +G+      A
Sbjct: 181 ILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLA 240

Query: 241 TETDASVPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHT 300
               A+ PA  +G PN  PLN+FPQ   +A +G G GN   L+FLRN+ QFQALR MV  
Sbjct: 241 QPQQAAAPAAATGGPNANPLNLFPQGMPAADAGAGAGN---LDFLRNSQQFQALRAMVQA 300

Query: 301 NPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVT 360
           NPQILQPMLQELGKQNPQL+RLIQ+H A+FL+LINEPV+  E  M EQ E  MP A+ VT
Sbjct: 301 NPQILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVEGEENVM-EQLEAAMPQAVTVT 360

Query: 361 PAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 402
           P E+ AIERLE MGFDRA+V+E F AC++NEELAANYLL++  +F+D
Sbjct: 361 PEEREAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFED 377

[Close]
BLAST of Cucsa.177370 vs. Swiss-Prot
Match: RAD23_ORYSJ (Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica GN=RAD23 PE=1 SV=2)

HSP 1 Score: 364.4 bits (934), Expect = 1.6e-99
Identity = 202/407 (49.63%), Postives = 263/407 (64.62%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MK++VKTLKGS F+I V     V  VK+ IE  QG+  YP  QQ+LIH GKVLKD++TL 
Sbjct: 1   MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60

Query: 61  ENKVSEEGFLVVMLSKSK-TSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQV 120
           ENKV E  FLV+ML + K +S SA  +S  P+   P  Q V    PAA  + +P   A  
Sbjct: 61  ENKVLENSFLVIMLRQGKGSSSSAPATSKAPSNQAPPTQTV----PAAPASQAPVAPATT 120

Query: 121 TPSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQ 180
            P    AP      PT   S AP    S+        + D YGQA SNLVAG+NLE T+Q
Sbjct: 121 VPVTVSAP-----TPTATASPAPAVAVSS--------EADNYGQATSNLVAGSNLEATIQ 180

Query: 181 QLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATE--- 240
            +++MGGG WDR+ V+ AL AA+NNPERAV+YLYSG+PE  ++ VP         T+   
Sbjct: 181 SILEMGGGIWDRDIVLHALSAAFNNPERAVEYLYSGVPEQMDIPVPPPSIQPANPTQASQ 240

Query: 241 -TDASVPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTN 300
            T  + P+ +S  PN +PL++FPQ   +A +   G  LG+L+ LRNN QF+ L ++V  N
Sbjct: 241 ATQPAAPSILSSGPNASPLDLFPQALPNASTDAAG--LGNLDALRNNAQFRTLLSLVQAN 300

Query: 301 PQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGE-MFEQAEPDMPHAINVT 360
           PQILQP+LQELGKQNPQ+L+LIQ++ AEFL LINEP +  + E + +Q    MP  I VT
Sbjct: 301 PQILQPLLQELGKQNPQILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAMPQTIAVT 360

Query: 361 PAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 402
           P E  AI RLEAMGFDRALV++ F AC+++E+LAANYLL++  +FDD
Sbjct: 361 PEENEAILRLEAMGFDRALVLDVFFACNKDEQLAANYLLDHMNEFDD 388

[Close]
BLAST of Cucsa.177370 vs. TrEMBL
Match: A0A0A0LF05_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710740 PE=4 SV=1)

HSP 1 Score: 767.3 bits (1980), Expect = 9.2e-219
Identity = 391/401 (97.51%), Postives = 391/401 (97.51%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVT 120
           ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQV          T
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQV----------T 120

Query: 121 PSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQ 180
           PSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQ
Sbjct: 121 PSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQ 180

Query: 181 LMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS 240
           LMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS
Sbjct: 181 LMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS 240

Query: 241 VPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQ 300
           VPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQ
Sbjct: 241 VPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQ 300

Query: 301 PMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAA 360
           PMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAA
Sbjct: 301 PMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAA 360

Query: 361 IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 402
           IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 391

[Close]
BLAST of Cucsa.177370 vs. TrEMBL
Match: A0A061GC26_THECC (Rad23 UV excision repair protein family isoform 1 OS=Theobroma cacao GN=TCM_029286 PE=4 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 4.1e-166
Identity = 309/401 (77.06%), Postives = 334/401 (83.29%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQ  DTVMAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE+TLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVT 120
           +NKVSE+GFLVVMLSKSK+  SAG SS QPA +                TPS TP A   
Sbjct: 61  DNKVSEDGFLVVMLSKSKSLGSAGTSSAQPASS----------------TPSVTPPAS-- 120

Query: 121 PSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQ 180
            +P PAP+AP QAPT       K TTS S+  T N  TDTY QAASNLVAGNNLEQT+QQ
Sbjct: 121 -NPAPAPEAPAQAPTS------KGTTSASDTATANPNTDTYSQAASNLVAGNNLEQTIQQ 180

Query: 181 LMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS 240
           LMDMGGGNWD+ETV RALRAAYNNPERAVDYLYSGIPESAEVAVPVGRF + Q TET A+
Sbjct: 181 LMDMGGGNWDKETVTRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFPTSQTTETGAA 240

Query: 241 VPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQ 300
             APVSGAPN++PLNMFPQE LS   G G G LGSL+FLRNN QFQALR+MV +NPQILQ
Sbjct: 241 PAAPVSGAPNSSPLNMFPQETLS---GAGAGGLGSLDFLRNNQQFQALRSMVQSNPQILQ 300

Query: 301 PMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAA 360
           PMLQELGKQNPQLLRLIQ+HHAEFLQLINEP++  EG++F+QAE DMPHAINVTPAEQ A
Sbjct: 301 PMLQELGKQNPQLLRLIQEHHAEFLQLINEPLEGSEGDIFDQAEQDMPHAINVTPAEQEA 360

Query: 361 IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 402
           IERLEAMGFDRALVIEAFLACDRNEELAANYLLEN+GDF+D
Sbjct: 361 IERLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFED 373

[Close]
BLAST of Cucsa.177370 vs. TrEMBL
Match: A0A059AIX4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03137 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 9.7e-160
Identity = 300/402 (74.63%), Postives = 336/402 (83.58%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKG++FEI+VQ TDT+MAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDE+TLA
Sbjct: 1   MKLTVKTLKGTNFEIKVQPTDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVT 120
           +NKVSE+GFLVVMLSKSK S SAG SSTQPA          ++T AA  T + T AA   
Sbjct: 61  DNKVSEDGFLVVMLSKSKISGSAGTSSTQPASTTAATT---AATTAA--TTAATTAATTA 120

Query: 121 PS-PTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQ 180
           PS P+PAP AP QAP       P   TSTSE  T NV +D Y QAAS+LVAGNNLE+++Q
Sbjct: 121 PSNPSPAPDAPAQAP-------PSKGTSTSEGSTANVPSDAYSQAASHLVAGNNLEESIQ 180

Query: 181 QLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDA 240
           QLMDMGGG W+RE VVRALRAAYNNPERAVDYLYSGIPESAE+AVP G   + QA E  A
Sbjct: 181 QLMDMGGGTWEREMVVRALRAAYNNPERAVDYLYSGIPESAEIAVP-GVHPASQANEAGA 240

Query: 241 SVPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQIL 300
           + P P SGAPNT+PLN+FPQEALS+ +GGGG  LG+L+FLRNN QFQALR+MV  NPQIL
Sbjct: 241 AAPVPTSGAPNTSPLNLFPQEALSSAAGGGG--LGTLDFLRNNQQFQALRSMVQANPQIL 300

Query: 301 QPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQA 360
           QPMLQELGKQNPQLLRLIQ+HHAEFLQLINEP+D  EG++F+Q + DMPHAINVTPAEQ 
Sbjct: 301 QPMLQELGKQNPQLLRLIQEHHAEFLQLINEPLDGSEGDIFDQPDQDMPHAINVTPAEQE 360

Query: 361 AIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 402
           AIERLEAMGFDRALVIEAFLACDRNEELAANYLLE++GDF+D
Sbjct: 361 AIERLEAMGFDRALVIEAFLACDRNEELAANYLLEHAGDFED 387

[Close]
BLAST of Cucsa.177370 vs. TrEMBL
Match: A0A0D2SUE1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G091100 PE=4 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 3.7e-159
Identity = 297/401 (74.06%), Postives = 327/401 (81.55%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQ  DTVMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDE+TLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVT 120
           +NKVSE+GFLVVMLSKSK+  SAG SS QPA + P     +S+                 
Sbjct: 61  DNKVSEDGFLVVMLSKSKSLGSAGTSSAQPASSAPSTTAPVSN----------------- 120

Query: 121 PSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQ 180
             PTPAP+ P QAP        K+ TS S+  T N  TDTY QAASNLVAG+NLEQT+QQ
Sbjct: 121 --PTPAPEVPAQAPDS------KSGTSASDAATANPDTDTYSQAASNLVAGSNLEQTIQQ 180

Query: 181 LMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS 240
           LMDMGGG+WD+ETV RALRAAYNNPERAVDYLYSGIPE AEVAVPV  F S Q TE+ A+
Sbjct: 181 LMDMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPELAEVAVPVPHFPSSQTTESGAA 240

Query: 241 VPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQ 300
             APVSGAPN++PLNMFPQE LS  + GG   LGSL+FLRNN QFQALR+MV +NPQILQ
Sbjct: 241 PVAPVSGAPNSSPLNMFPQETLSGAAAGG---LGSLDFLRNNQQFQALRSMVQSNPQILQ 300

Query: 301 PMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAA 360
           PMLQELGKQNPQLLRLIQ+HHAEFLQLINEP+   EG++F+QAE +MPHAINVTPAEQ A
Sbjct: 301 PMLQELGKQNPQLLRLIQEHHAEFLQLINEPLQGSEGDIFDQAEQEMPHAINVTPAEQEA 360

Query: 361 IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 402
           IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 373

[Close]
BLAST of Cucsa.177370 vs. TrEMBL
Match: A0A059AJF1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03137 PE=4 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 2.4e-158
Identity = 300/403 (74.44%), Postives = 336/403 (83.37%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKG++FEI+VQ TDT+MAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDE+TLA
Sbjct: 1   MKLTVKTLKGTNFEIKVQPTDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 61  ENKVSEEGFLVVMLSK-SKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQV 120
           +NKVSE+GFLVVMLSK SK S SAG SSTQPA          ++T AA  T + T AA  
Sbjct: 61  DNKVSEDGFLVVMLSKQSKISGSAGTSSTQPASTTAATT---AATTAA--TTAATTAATT 120

Query: 121 TPS-PTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTV 180
            PS P+PAP AP QAP       P   TSTSE  T NV +D Y QAAS+LVAGNNLE+++
Sbjct: 121 APSNPSPAPDAPAQAP-------PSKGTSTSEGSTANVPSDAYSQAASHLVAGNNLEESI 180

Query: 181 QQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETD 240
           QQLMDMGGG W+RE VVRALRAAYNNPERAVDYLYSGIPESAE+AVP G   + QA E  
Sbjct: 181 QQLMDMGGGTWEREMVVRALRAAYNNPERAVDYLYSGIPESAEIAVP-GVHPASQANEAG 240

Query: 241 ASVPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQI 300
           A+ P P SGAPNT+PLN+FPQEALS+ +GGGG  LG+L+FLRNN QFQALR+MV  NPQI
Sbjct: 241 AAAPVPTSGAPNTSPLNLFPQEALSSAAGGGG--LGTLDFLRNNQQFQALRSMVQANPQI 300

Query: 301 LQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQ 360
           LQPMLQELGKQNPQLLRLIQ+HHAEFLQLINEP+D  EG++F+Q + DMPHAINVTPAEQ
Sbjct: 301 LQPMLQELGKQNPQLLRLIQEHHAEFLQLINEPLDGSEGDIFDQPDQDMPHAINVTPAEQ 360

Query: 361 AAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 402
            AIERLEAMGFDRALVIEAFLACDRNEELAANYLLE++GDF+D
Sbjct: 361 EAIERLEAMGFDRALVIEAFLACDRNEELAANYLLEHAGDFED 388

[Close]
BLAST of Cucsa.177370 vs. TAIR10
Match: AT1G79650.4 (AT1G79650.4 Rad23 UV excision repair protein family)

HSP 1 Score: 513.8 bits (1322), Expect = 9.3e-146
Identity = 273/404 (67.57%), Postives = 320/404 (79.21%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV  +DT+MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQ-VTPSPTPAAQV 120
           ENKV+EEGFLVVMLSKSK+  SAGQ+S Q +    V+QPV ++T + +   PS T ++ V
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSS---VSQPVSATTSSTKPAAPSTTQSSPV 120

Query: 121 TPSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQ 180
             SP PA + P         +                QTDTYGQAAS LV+G++LEQ VQ
Sbjct: 121 PASPIPAQEQPAVYAFVFSFAGLAFCPLYGFPKVSMAQTDTYGQAASTLVSGSSLEQMVQ 180

Query: 181 QLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDA 240
           Q+M+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIP++AEVAVPV      Q   + A
Sbjct: 181 QIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGA 240

Query: 241 SVPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQIL 300
           +  AP SG PN++PL++FPQE ++A    G G+LG+LEFLRNN QFQ LRTMVH+NPQIL
Sbjct: 241 APVAPASGGPNSSPLDLFPQETVAA---AGSGDLGTLEFLRNNDQFQQLRTMVHSNPQIL 300

Query: 301 QPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD--NFEGEMFEQAEPDMPHAINVTPAE 360
           QPMLQELGKQNPQLLRLIQ++ AEFLQL+NEP +  + EG+MF+Q E +MPHAINVTPAE
Sbjct: 301 QPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAE 360

Query: 361 QAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 402
           Q AI+RLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 QEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 395

[Close]
BLAST of Cucsa.177370 vs. TAIR10
Match: AT1G16190.1 (AT1G16190.1 Rad23 UV excision repair protein family)

HSP 1 Score: 475.7 bits (1223), Expect = 2.8e-134
Identity = 258/404 (63.86%), Postives = 306/404 (75.74%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV  TDT+MAVKKNIED Q KDNYPCGQQLLIHNGKVLKDE+TL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVT 120
           ENKV+EEGFLVVMLSKSKT+ SAG SSTQP          +SST  A   PS T +  V 
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQPTS---TTTSTISSTTLA--APSTTQSIAVP 120

Query: 121 PS-PTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQ 180
            S  TP  + PT                         Q+DTYGQAAS LV+G+++EQ VQ
Sbjct: 121 ASNSTPVQEQPT------------------------AQSDTYGQAASTLVSGSSIEQMVQ 180

Query: 181 QLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDA 240
           Q+M+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIPE+  V +P     SG  +  + 
Sbjct: 181 QIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPET--VTIPATNL-SGVGSGREL 240

Query: 241 SVPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQIL 300
           + P P SG PN++PL++FPQEA+   S   GG+LG+LEFLR N QFQ LR+MV++NPQIL
Sbjct: 241 TAPPP-SGGPNSSPLDLFPQEAV---SDAAGGDLGTLEFLRGNDQFQQLRSMVNSNPQIL 300

Query: 301 QPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEG--EMFEQAEPDMPHAINVTPAE 360
           QPMLQELGKQNPQLLRLIQ++ AEFLQL+NEP +  +G  ++F+Q + +MPH++NVTP E
Sbjct: 301 QPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEE 360

Query: 361 QAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 402
           Q +IERLEAMGFDRA+VIEAFL+CDRNEELAANYLLE+S DF+D
Sbjct: 361 QESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFED 368

[Close]
BLAST of Cucsa.177370 vs. TAIR10
Match: AT3G02540.1 (AT3G02540.1 Rad23 UV excision repair protein family)

HSP 1 Score: 411.4 bits (1056), Expect = 6.5e-115
Identity = 233/426 (54.69%), Postives = 289/426 (67.84%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MK+ VKTLKG+HFEI V+  D+V+ VKKNIE VQG D YP  +Q+LIH GKVLKDE+T+ 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVSEEGFLVVMLSKSK------TSVSAGQS---STQPAQNPPVAQPVLSSTPAAQVTP 120
           ENKV+E  F+V+M++KSK      +S SAG S   S  P+ + P   P   ++ +A V P
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120

Query: 121 SPTPAAQVTPSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNV----QTDTYGQAASN 180
           +PT      P+PTPAP A T+  T         T S+S    D+     Q D YGQAASN
Sbjct: 121 APTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAASN 180

Query: 181 LVAGNNLEQTVQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVG 240
           L AG+NLE T+QQ++DMGGG WDRETVV ALRAA+NNPERAV+YLY+GIPE AEV  PV 
Sbjct: 181 LAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVP-PVA 240

Query: 241 R--FGSGQ----ATETDASVPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRN 300
           R    +GQ      +T     AP SG PN  PL++FPQ   + G   G    G+L+FLRN
Sbjct: 241 RPPASAGQPANPPAQTQQPAAAPASG-PNANPLDLFPQGLPNVGGNPGA---GTLDFLRN 300

Query: 301 NPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD------NF 360
           + QFQALR MV  NPQ+LQPMLQELGKQNP L+RLIQDH A+FL+LINEPV+      N 
Sbjct: 301 SQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNL 360

Query: 361 EGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLEN 402
            G+M   A    P AI VT  E+ AIERLEAMGF+RALV+E F AC++NEELAANYLL++
Sbjct: 361 LGQM--AAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDH 419

[Close]
BLAST of Cucsa.177370 vs. TAIR10
Match: AT5G38470.1 (AT5G38470.1 Rad23 UV excision repair protein family)

HSP 1 Score: 401.7 bits (1031), Expect = 5.1e-112
Identity = 223/407 (54.79%), Postives = 272/407 (66.83%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MK+ VKTL GS+FEI V+  D V  VK  IE V+G + YP  +Q+LIH GKVLKDE+TL 
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVT 120
           EN V E  F+V+MLSK+K S S   +++ PA  P   QP   +TP               
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGASTASAPA--PSATQPQTVATPQVS------------ 120

Query: 121 PSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQ 180
                AP A    PT   ++A    T+ S      VQTD YGQAASNLVAG  LE TVQQ
Sbjct: 121 -----APTASVPVPTSGTATAAAPATAAS------VQTDVYGQAASNLVAGTTLESTVQQ 180

Query: 181 LMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQ------A 240
           ++DMGGG+WDR+TVVRALRAA+NNPERAV+YLYSGIP  AE+        +G+      A
Sbjct: 181 ILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLA 240

Query: 241 TETDASVPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHT 300
               A+ PA  +G PN  PLN+FPQ   +A +G G GN   L+FLRN+ QFQALR MV  
Sbjct: 241 QPQQAAAPAAATGGPNANPLNLFPQGMPAADAGAGAGN---LDFLRNSQQFQALRAMVQA 300

Query: 301 NPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVT 360
           NPQILQPMLQELGKQNPQL+RLIQ+H A+FL+LINEPV+  E  M EQ E  MP A+ VT
Sbjct: 301 NPQILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVEGEENVM-EQLEAAMPQAVTVT 360

Query: 361 PAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 402
           P E+ AIERLE MGFDRA+V+E F AC++NEELAANYLL++  +F+D
Sbjct: 361 PEEREAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFED 377

[Close]
BLAST of Cucsa.177370 vs. TAIR10
Match: AT5G16090.1 (AT5G16090.1 INVOLVED IN: nucleotide-excision repair)

HSP 1 Score: 82.4 bits (202), Expect = 6.9e-16
Identity = 43/100 (43.00%), Postives = 60/100 (60.00%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MK+ VKTLKG  FEI V+  D+V  VKKNIE V G   YP  QQ+LIH  + L+DE+T+ 
Sbjct: 1   MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60

Query: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPV 101
            NKV ++  + ++++K       G       QNPP+ Q +
Sbjct: 61  ANKVFDKSVIAIIITK-------GCLEEMEKQNPPLFQMI 93


HSP 2 Score: 79.3 bits (194), Expect = 5.8e-15
Identity = 42/98 (42.86%), Postives = 67/98 (68.37%), Query Frame = 1 

Query: 298 ILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAE 357
           I +  L+E+ KQNP L ++I+ + A F+ ++N+     + E+  Q E D+   + VT  +
Sbjct: 74  ITKGCLEEMEKQNPPLFQMIRHNSAGFVPVLNKESFERDNEL-AQPEEDLLQ-LQVTAVD 133

Query: 358 QAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLEN 396
             AI RLEAMGF+R +V+E FLAC++NE+LAAN+LL++
Sbjct: 134 DEAINRLEAMGFERRVVLEVFLACNKNEQLAANFLLDH 169

[Close]
BLAST of Cucsa.177370 vs. NCBI nr
Match: gi|778682917|ref|XP_011651807.1| (PREDICTED: ubiquitin receptor RAD23b [Cucumis sativus])

HSP 1 Score: 767.3 bits (1980), Expect = 1.3e-218
Identity = 391/401 (97.51%), Postives = 391/401 (97.51%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVT 120
           ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQV          T
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQV----------T 120

Query: 121 PSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQ 180
           PSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQ
Sbjct: 121 PSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQ 180

Query: 181 LMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS 240
           LMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS
Sbjct: 181 LMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS 240

Query: 241 VPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQ 300
           VPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQ
Sbjct: 241 VPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQ 300

Query: 301 PMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAA 360
           PMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAA
Sbjct: 301 PMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAA 360

Query: 361 IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 402
           IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 391

[Close]
BLAST of Cucsa.177370 vs. NCBI nr
Match: gi|659125985|ref|XP_008462953.1| (PREDICTED: ubiquitin receptor RAD23b isoform X1 [Cucumis melo])

HSP 1 Score: 744.2 bits (1920), Expect = 1.2e-211
Identity = 381/401 (95.01%), Postives = 382/401 (95.26%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVT 120
           ENKVSEEGFLVVMLSKSKTS SAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPA Q  
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSASAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAPQ-- 120

Query: 121 PSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQ 180
                       APTQAPSSA KNTTSTS+RVTDNVQTDTYGQAASNLVAGNNLEQTVQQ
Sbjct: 121 ------------APTQAPSSALKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQ 180

Query: 181 LMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS 240
           LMDMGGG WDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS
Sbjct: 181 LMDMGGGTWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS 240

Query: 241 VPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQ 300
           VPAPVSGAPNTAPLNMFPQEALSAG GGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQ
Sbjct: 241 VPAPVSGAPNTAPLNMFPQEALSAGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQ 300

Query: 301 PMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAA 360
           PMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAA
Sbjct: 301 PMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAA 360

Query: 361 IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 402
           IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 387

[Close]
BLAST of Cucsa.177370 vs. NCBI nr
Match: gi|659125987|ref|XP_008462954.1| (PREDICTED: ubiquitin receptor RAD23b isoform X2 [Cucumis melo])

HSP 1 Score: 700.7 bits (1807), Expect = 1.5e-198
Identity = 358/378 (94.71%), Postives = 359/378 (94.97%), Query Frame = 1 

Query: 24  MAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKSKTSVSA 83
           MAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKSKTS SA
Sbjct: 1   MAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKSKTSASA 60

Query: 84  GQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVTPSPTPAPQAPTQAPTQAPSSAPK 143
           GQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPA Q              APTQAPSSA K
Sbjct: 61  GQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAPQ--------------APTQAPSSALK 120

Query: 144 NTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETVVRALRAAYN 203
           NTTSTS+RVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGG WDRETVVRALRAAYN
Sbjct: 121 NTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGTWDRETVVRALRAAYN 180

Query: 204 NPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPNTAPLNMFPQEALS 263
           NPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPNTAPLNMFPQEALS
Sbjct: 181 NPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPNTAPLNMFPQEALS 240

Query: 264 AGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAE 323
           AG GGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAE
Sbjct: 241 AGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAE 300

Query: 324 FLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALVIEAFLACDR 383
           FLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALVIEAFLACDR
Sbjct: 301 FLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALVIEAFLACDR 360

Query: 384 NEELAANYLLENSGDFDD 402
           NEELAANYLLENSGDFDD
Sbjct: 361 NEELAANYLLENSGDFDD 364

[Close]
BLAST of Cucsa.177370 vs. NCBI nr
Match: gi|590621587|ref|XP_007024818.1| (Rad23 UV excision repair protein family isoform 1 [Theobroma cacao])

HSP 1 Score: 592.4 bits (1526), Expect = 5.8e-166
Identity = 309/401 (77.06%), Postives = 334/401 (83.29%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQ  DTVMAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE+TLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVT 120
           +NKVSE+GFLVVMLSKSK+  SAG SS QPA +                TPS TP A   
Sbjct: 61  DNKVSEDGFLVVMLSKSKSLGSAGTSSAQPASS----------------TPSVTPPAS-- 120

Query: 121 PSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQ 180
            +P PAP+AP QAPT       K TTS S+  T N  TDTY QAASNLVAGNNLEQT+QQ
Sbjct: 121 -NPAPAPEAPAQAPTS------KGTTSASDTATANPNTDTYSQAASNLVAGNNLEQTIQQ 180

Query: 181 LMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS 240
           LMDMGGGNWD+ETV RALRAAYNNPERAVDYLYSGIPESAEVAVPVGRF + Q TET A+
Sbjct: 181 LMDMGGGNWDKETVTRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFPTSQTTETGAA 240

Query: 241 VPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQ 300
             APVSGAPN++PLNMFPQE LS   G G G LGSL+FLRNN QFQALR+MV +NPQILQ
Sbjct: 241 PAAPVSGAPNSSPLNMFPQETLS---GAGAGGLGSLDFLRNNQQFQALRSMVQSNPQILQ 300

Query: 301 PMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAA 360
           PMLQELGKQNPQLLRLIQ+HHAEFLQLINEP++  EG++F+QAE DMPHAINVTPAEQ A
Sbjct: 301 PMLQELGKQNPQLLRLIQEHHAEFLQLINEPLEGSEGDIFDQAEQDMPHAINVTPAEQEA 360

Query: 361 IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 402
           IERLEAMGFDRALVIEAFLACDRNEELAANYLLEN+GDF+D
Sbjct: 361 IERLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFED 373

[Close]
BLAST of Cucsa.177370 vs. NCBI nr
Match: gi|802565140|ref|XP_012067446.1| (PREDICTED: ubiquitin receptor RAD23b-like [Jatropha curcas])

HSP 1 Score: 581.3 bits (1497), Expect = 1.3e-162
Identity = 305/402 (75.87%), Postives = 335/402 (83.33%), Query Frame = 1 

Query: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQ TDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDE+TLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVT 120
           ENKV+E+GFLVVMLSKSKTS S G SS+        AQP   + P    TP+ TPAA+V 
Sbjct: 61  ENKVTEDGFLVVMLSKSKTSSSTGTSSSS-------AQPAAVTPPTTAATPNLTPAAEV- 120

Query: 121 PSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQ 180
                          QAP S  K+TTS SE  T   QTDTYGQAASNLVAG+NLEQT+QQ
Sbjct: 121 ---------------QAPIS--KSTTSASETATATAQTDTYGQAASNLVAGSNLEQTIQQ 180

Query: 181 LMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS 240
           +MD+GGGNWD+ETV RALRAAYNNPERAVDYLYSGIPE+AEVAVP  RF +GQAT+T AS
Sbjct: 181 IMDIGGGNWDKETVTRALRAAYNNPERAVDYLYSGIPETAEVAVP--RFAAGQATDTGAS 240

Query: 241 VPAPVSGAPNTAPLNMFPQEALSAGSGGGG-GNLGSLEFLRNNPQFQALRTMVHTNPQIL 300
             AP SGAPNT+PLNMFPQE LSAG G GG G LGSL+FLRNN QFQALR+MV  NPQIL
Sbjct: 241 PTAPASGAPNTSPLNMFPQETLSAGGGSGGTGGLGSLDFLRNNQQFQALRSMVQANPQIL 300

Query: 301 QPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQA 360
           QPMLQELGKQNPQLLR+IQ+H+AEFLQLINEP++  EG++F+Q + DMPHAINVTPAEQ 
Sbjct: 301 QPMLQELGKQNPQLLRMIQEHNAEFLQLINEPLEGSEGDIFDQVDQDMPHAINVTPAEQE 360

Query: 361 AIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 402
           AIERLEAMGFDRALVIEAFLACDRNEELAANYLLEN+GDF+D
Sbjct: 361 AIERLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFED 375

The following BLAST results are available for this feature:
BLAST of Cucsa.177370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RD23B_ARATH1.6e-14467.57Ubiquitin receptor RAD23b OS=Arabidopsis thaliana GN=RAD23B PE=1 SV=3[more]
RD23A_ARATH5.0e-13363.86Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana GN=RAD23A PE=1 SV=2[more]
RD23C_ARATH1.2e-11354.69Ubiquitin receptor RAD23c OS=Arabidopsis thaliana GN=RAD23C PE=1 SV=2[more]
RD23D_ARATH9.1e-11154.79Ubiquitin receptor RAD23d OS=Arabidopsis thaliana GN=RAD23D PE=1 SV=2[more]
RAD23_ORYSJ1.6e-9949.63Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica GN=RAD23 PE=1 ... [more]
BLAST of Cucsa.177370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF05_CUCSA9.2e-21997.51Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710740 PE=4 SV=1[more]
A0A061GC26_THECC4.1e-16677.06Rad23 UV excision repair protein family isoform 1 OS=Theobroma cacao GN=TCM_0292... [more]
A0A059AIX4_EUCGR9.7e-16074.63Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03137 PE=4 SV=1[more]
A0A0D2SUE1_GOSRA3.7e-15974.06Uncharacterized protein OS=Gossypium raimondii GN=B456_006G091100 PE=4 SV=1[more]
A0A059AJF1_EUCGR2.4e-15874.44Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03137 PE=4 SV=1[more]
BLAST of Cucsa.177370 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G79650.49.3e-14667.57 Rad23 UV excision repair protein family[more]
AT1G16190.12.8e-13463.86 Rad23 UV excision repair protein family[more]
AT3G02540.16.5e-11554.69 Rad23 UV excision repair protein family[more]
AT5G38470.15.1e-11254.79 Rad23 UV excision repair protein family[more]
AT5G16090.16.9e-1643.00 INVOLVED IN: nucleotide-excision repair[more]
BLAST of Cucsa.177370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778682917|ref|XP_011651807.1|1.3e-21897.51PREDICTED: ubiquitin receptor RAD23b [Cucumis sativus][more]
gi|659125985|ref|XP_008462953.1|1.2e-21195.01PREDICTED: ubiquitin receptor RAD23b isoform X1 [Cucumis melo][more]
gi|659125987|ref|XP_008462954.1|1.5e-19894.71PREDICTED: ubiquitin receptor RAD23b isoform X2 [Cucumis melo][more]
gi|590621587|ref|XP_007024818.1|5.8e-16677.06Rad23 UV excision repair protein family isoform 1 [Theobroma cacao][more]
gi|802565140|ref|XP_012067446.1|1.3e-16275.87PREDICTED: ubiquitin receptor RAD23b-like [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR004806Rad23
IPR006636STI1_HS-bd
IPR009060UBA-like_sf
IPR015360XPC-bd
IPR015940UBA
IPR004806Rad23
IPR006636STI1_HS-bd
IPR009060UBA-like_sf
IPR015360XPC-bd
IPR015940UBA
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003684damaged DNA binding
GO:0005515protein binding
GO:0003684damaged DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006289nucleotide-excision repair
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0006289nucleotide-excision repair
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006289 nucleotide-excision repair
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0003684 damaged DNA binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.177370.1Cucsa.177370.1mRNA
Cucsa.177370.2Cucsa.177370.2mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004806UV excision repair protein Rad23PRINTSPR01839RAD23PROTEINcoord: 245..267
score: 3.3E-32coord: 311..325
score: 3.3E-32coord: 294..310
score: 3.3E-32coord: 326..341
score: 3.3
IPR004806UV excision repair protein Rad23TIGRFAMsTIGR00601TIGR00601coord: 49..343
score: 8.5
IPR006636Heat shock chaperonin-bindingSMARTSM00727CBMcoord: 217..260
score: 3.
IPR009060UBA-likeunknownSSF46934UBA-likecoord: 282..342
score: 1.92E-14coord: 114..165
score: 2.04
IPR015360XPC-binding domainGENE3DG3DSA:1.10.10.540coord: 216..281
score: 8.0
IPR015360XPC-binding domainPFAMPF09280XPC-bindingcoord: 219..274
score: 2.6
IPR015360XPC-binding domainunknownSSF101238XPC-binding domaincoord: 216..281
score: 1.1
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 300..335
score: 1.4E-11coord: 117..155
score: 1.9
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 300..337
score: 1.3E-7coord: 117..157
score: 1.
IPR015940Ubiquitin-associated domainPROFILEPS50030UBAcoord: 115..158
score: 13.222coord: 298..338
score: 14
NoneNo IPR availableGENE3DG3DSA:1.10.8.10coord: 110..161
score: 2.1E-21coord: 297..342
score: 2.3
NoneNo IPR availablePANTHERPTHR10621UV EXCISION REPAIR PROTEIN RAD23coord: 16..340
score: 3.2E
NoneNo IPR availablePANTHERPTHR10621:SF9F12F1.16 PROTEIN-RELATEDcoord: 16..340
score: 3.2E