Cucsa.170640 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.170640
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionLow temperature and salt responsive protein family
Locationscaffold01179 : 7950 .. 8521 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTGCCACACCTACCATCGTCTTCCTTCTGAATTTGCTCAGACCGCCATTAAACCATGCCATCTCGCTGTGAAATCTTCTGCGAGATTCTCATTGCTATCTTGATTCCTCCTTTGGGCGTCTGTCTCAGGCATGGATGTTGCACCGTACGTTTCTGATTCTTTTCTCCTTTTGTTTGAATTTTTCCTCTTTtCTTTTTTTTATCAATTCGAATGTAATTCTGATTTATGATTGCTTGTGGTTGCAGGTTGAGTTTTGTATATGCCTTCTTTTGACATTTCTCGGTTATGTTCCTGGAATCATCTACGCTTTGTATGCCATCGTTTTCATCGATCGCAATGAGTACTTCGATGAATACAGACGTCCTCTGTATGCGCCGGCCTAGATTCCTTAATCCTTAGGTATTTCGCTTTTACATCATTTCTTGTGCCGTAATTACTCCGAATTTCATCTGTTTGTGATTGGATCTGTGTATTGTGTATTCGCCTTCTGTTATTGCTAAAACCCTTGTATAAGTTCATCCGGATGGAGTAACCAATTAATCGATGTTGTTAATGGAACGACTACTATTTG

mRNA sequence

TCTGCCACACCTACCATCGTCTTCCTTCTGAATTTGCTCAGACCGCCATTAAACCATGCCATCTCGCTGTGAAATCTTCTGCGAGATTCTCATTGCTATCTTGATTCCTCCTTTGGGCGTCTGTCTCAGGCATGGATGTTGCACCGTTGAGTTTTGTATATGCCTTCTTTTGACATTTCTCGGTTATGTTCCTGGAATCATCTACGCTTTGTATGCCATCGTTTTCATCGATCGCAATGAGTACTTCGATGAATACAGACGTCCTCTGTATGCGCCGGCCTAGATTCCTTAATCCTTAGGTATTTCGCTTTTACATCATTTCTTGTGCCGTAATTACTCCGAATTTCATCTGTTTGTGATTGGATCTGTGTATTGTGTATTCGCCTTCTGTTATTGCTAAAACCCTTGTATAAGTTCATCCGGATGGAGTAACCAATTAATCGATGTTGTTAATGGAACGACTACTATTTG

Coding sequence (CDS)

ATGCCATCTCGCTGTGAAATCTTCTGCGAGATTCTCATTGCTATCTTGATTCCTCCTTTGGGCGTCTGTCTCAGGCATGGATGTTGCACCGTTGAGTTTTGTATATGCCTTCTTTTGACATTTCTCGGTTATGTTCCTGGAATCATCTACGCTTTGTATGCCATCGTTTTCATCGATCGCAATGAGTACTTCGATGAATACAGACGTCCTCTGTATGCGCCGGCCTAG

Protein sequence

MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDRNEYFDEYRRPLYAPA*
Homology
[Close]
BLAST of Cucsa.170640 vs. Swiss-Prot
Match: RC24_ARATH (UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana GN=At4g30660 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.2e-29
Identity = 57/73 (78.08%), Postives = 63/73 (86.30%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LT LGYVPGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 NEYFDEYRRPLYA 74
           EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]
BLAST of Cucsa.170640 vs. Swiss-Prot
Match: RC22_ARATH (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana GN=At2g24040 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-28
Identity = 55/72 (76.39%), Postives = 64/72 (88.89%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M S CE+ CEI IAIL+PP+GVCLRHGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 NEYFDEYRRPLY 73
          +EYFDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]
BLAST of Cucsa.170640 vs. Swiss-Prot
Match: RC23_ARATH (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana GN=At4g30650 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.2e-21
Identity = 46/60 (76.67%), Postives = 52/60 (86.67%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M S  E+FCEILIAIL+PPLGVCL+ GCCTVEF ICL+LT LGY+PGIIYALY IVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

[Close]
BLAST of Cucsa.170640 vs. Swiss-Prot
Match: OSR8_ORYSJ (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica GN=OSR8 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 9.1e-20
Identity = 43/64 (67.19%), Postives = 53/64 (82.81%), Query Frame = 1 

Query: 4  RCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDRNEY 63
          RC  F EIL+AI++PPLGV LR GCC++EFCICLLLT LGYVPGIIYA+Y +V +D ++Y
Sbjct: 5  RCCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALDSDQY 64

Query: 64 FDEY 68
            EY
Sbjct: 65 QREY 68

[Close]
BLAST of Cucsa.170640 vs. Swiss-Prot
Match: LTI6B_ORYSI (Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica GN=LTI6B PE=3 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 1.6e-11
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 1 

Query: 10 EILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAI 56
          +ILIAI++PPLGV L+ GC   EF ICLLLTFLGY+PGIIYA+YAI
Sbjct: 9  DILIAIILPPLGVFLKFGCGH-EFWICLLLTFLGYIPGIIYAIYAI 53

[Close]
BLAST of Cucsa.170640 vs. TrEMBL
Match: A0A0A0LTR2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257300 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.2e-37
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 NEYFDEYRRPLYAPA 76
          NEYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]
BLAST of Cucsa.170640 vs. TrEMBL
Match: A9PBM2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s19630g PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 7.0e-35
Identity = 70/75 (93.33%), Postives = 72/75 (96.00%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEI CEILIAIL+PPLGVC RHGCC+VEFCICLLLT LGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEICCEILIAILLPPLGVCFRHGCCSVEFCICLLLTILGYVPGIIYALYAIVFIDR 60

Query: 61 NEYFDEYRRPLYAPA 76
          NEYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]
BLAST of Cucsa.170640 vs. TrEMBL
Match: M5W4C1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016228mg PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 4.5e-34
Identity = 66/73 (90.41%), Postives = 72/73 (98.63%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIA+LIPPLGVCLRHGCCT+EFCICLLLT LGY+PGIIYALYAIVF++R
Sbjct: 1  MPSRCEIFCEILIAVLIPPLGVCLRHGCCTIEFCICLLLTLLGYIPGIIYALYAIVFVNR 60

Query: 61 NEYFDEYRRPLYA 74
          +EYFDEYRRPLYA
Sbjct: 61 DEYFDEYRRPLYA 73

[Close]
BLAST of Cucsa.170640 vs. TrEMBL
Match: A0A067F037_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034455mg PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 4.5e-34
Identity = 65/74 (87.84%), Postives = 73/74 (98.65%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MP+RCEIFCEIL+A+L+PP+GVCLRHGCC+VEFCICLLLT LGYVPGIIYALYAIVF+DR
Sbjct: 1  MPTRCEIFCEILLAVLLPPVGVCLRHGCCSVEFCICLLLTILGYVPGIIYALYAIVFVDR 60

Query: 61 NEYFDEYRRPLYAP 75
          +EYFDEYRRPLYAP
Sbjct: 61 DEYFDEYRRPLYAP 74

[Close]
BLAST of Cucsa.170640 vs. TrEMBL
Match: V4UR64_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010088mg PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 4.5e-34
Identity = 65/74 (87.84%), Postives = 73/74 (98.65%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MP+RCEIFCEIL+A+L+PP+GVCLRHGCC+VEFCICLLLT LGYVPGIIYALYAIVF+DR
Sbjct: 1  MPTRCEIFCEILLAVLLPPVGVCLRHGCCSVEFCICLLLTILGYVPGIIYALYAIVFVDR 60

Query: 61 NEYFDEYRRPLYAP 75
          +EYFDEYRRPLYAP
Sbjct: 61 DEYFDEYRRPLYAP 74

[Close]
BLAST of Cucsa.170640 vs. TAIR10
Match: AT4G28088.1 (AT4G28088.1 Low temperature and salt responsive protein family)

HSP 1 Score: 130.6 bits (327), Expect = 4.2e-31
Identity = 57/72 (79.17%), Postives = 66/72 (91.67%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M + CEI CEI+IAILIPPLGVCLRHGCCT EF ICL+LT LGYVPGIIYALYAIV++DR
Sbjct: 1  MANGCEICCEIMIAILIPPLGVCLRHGCCTTEFMICLILTLLGYVPGIIYALYAIVYVDR 60

Query: 61 NEYFDEYRRPLY 73
          +++FDEYRRPL+
Sbjct: 61 DQFFDEYRRPLF 72

[Close]
BLAST of Cucsa.170640 vs. TAIR10
Match: AT4G30660.1 (AT4G30660.1 Low temperature and salt responsive protein family)

HSP 1 Score: 129.0 bits (323), Expect = 1.2e-30
Identity = 57/73 (78.08%), Postives = 63/73 (86.30%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LT LGYVPGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 NEYFDEYRRPLYA 74
           EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]
BLAST of Cucsa.170640 vs. TAIR10
Match: AT2G24040.1 (AT2G24040.1 Low temperature and salt responsive protein family)

HSP 1 Score: 126.7 bits (317), Expect = 6.0e-30
Identity = 55/72 (76.39%), Postives = 64/72 (88.89%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M S CE+ CEI IAIL+PP+GVCLRHGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 NEYFDEYRRPLY 73
          +EYFDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]
BLAST of Cucsa.170640 vs. TAIR10
Match: AT4G30650.1 (AT4G30650.1 Low temperature and salt responsive protein family)

HSP 1 Score: 102.4 bits (254), Expect = 1.2e-22
Identity = 46/60 (76.67%), Postives = 52/60 (86.67%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M S  E+FCEILIAIL+PPLGVCL+ GCCTVEF ICL+LT LGY+PGIIYALY IVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

[Close]
BLAST of Cucsa.170640 vs. TAIR10
Match: AT2G38905.1 (AT2G38905.1 Low temperature and salt responsive protein family)

HSP 1 Score: 74.3 bits (181), Expect = 3.6e-14
Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 1 

Query: 6  EIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIV 57
          E F EI++AIL+PP+GV LR+GC  VEF ICLLLT LGY+PGIIYA+Y +V
Sbjct: 4  ETFLEIILAILLPPVGVFLRYGC-GVEFWICLLLTILGYIPGIIYAIYVLV 53

[Close]
BLAST of Cucsa.170640 vs. NCBI nr
Match: gi|449457875|ref|XP_004146673.1| (PREDICTED: UPF0057 membrane protein At4g30660-like [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 1.7e-37
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 NEYFDEYRRPLYAPA 76
          NEYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]
BLAST of Cucsa.170640 vs. NCBI nr
Match: gi|659086272|ref|XP_008443846.1| (PREDICTED: UPF0057 membrane protein At4g30660-like [Cucumis melo])

HSP 1 Score: 161.4 bits (407), Expect = 6.3e-37
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 NEYFDEYRRPLYAPA 76
          +EYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]
BLAST of Cucsa.170640 vs. NCBI nr
Match: gi|566177126|ref|XP_002308410.2| (hypothetical protein POPTR_0006s19630g [Populus trichocarpa])

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-34
Identity = 70/75 (93.33%), Postives = 72/75 (96.00%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEI CEILIAIL+PPLGVC RHGCC+VEFCICLLLT LGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEICCEILIAILLPPLGVCFRHGCCSVEFCICLLLTILGYVPGIIYALYAIVFIDR 60

Query: 61 NEYFDEYRRPLYAPA 76
          NEYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]
BLAST of Cucsa.170640 vs. NCBI nr
Match: gi|645275850|ref|XP_008243011.1| (PREDICTED: UPF0057 membrane protein At4g30660-like [Prunus mume])

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-34
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIA+LIPPLGVCLRHGCCT+EFCICLLLT LGYVPGIIYALYAIVF+DR
Sbjct: 1  MPSRCEIFCEILIAVLIPPLGVCLRHGCCTIEFCICLLLTLLGYVPGIIYALYAIVFVDR 60

Query: 61 NEYFDEYRRPLYA 74
          +EYFDEYRRPLYA
Sbjct: 61 DEYFDEYRRPLYA 73

[Close]
BLAST of Cucsa.170640 vs. NCBI nr
Match: gi|568840116|ref|XP_006474017.1| (PREDICTED: UPF0057 membrane protein At4g30660 isoform X2 [Citrus sinensis])

HSP 1 Score: 152.1 bits (383), Expect = 3.8e-34
Identity = 66/74 (89.19%), Postives = 73/74 (98.65%), Query Frame = 1 

Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MP+RCEIFCEILIA+L+PP+GVCLRHGCC+VEFCICLLLT LGYVPGIIYALYAIVF+DR
Sbjct: 1  MPTRCEIFCEILIAVLLPPVGVCLRHGCCSVEFCICLLLTILGYVPGIIYALYAIVFVDR 60

Query: 61 NEYFDEYRRPLYAP 75
          +EYFDEYRRPLYAP
Sbjct: 61 DEYFDEYRRPLYAP 74

The following BLAST results are available for this feature:
BLAST of Cucsa.170640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RC24_ARATH2.2e-2978.08UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana GN=At4g30660 PE=2 SV=... [more]
RC22_ARATH1.1e-2876.39UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana GN=At2g24040 PE=3 SV=... [more]
RC23_ARATH2.2e-2176.67UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana GN=At4g30650 PE=3 SV=... [more]
OSR8_ORYSJ9.1e-2067.19Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica GN=OSR8 PE=3 SV=1[more]
LTI6B_ORYSI1.6e-1173.91Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica GN=LTI6B PE=3 SV=2[more]
BLAST of Cucsa.170640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTR2_CUCSA1.2e-37100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257300 PE=4 SV=1[more]
A9PBM2_POPTR7.0e-3593.33Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s19630g PE=2 SV=1[more]
M5W4C1_PRUPE4.5e-3490.41Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016228mg PE=4 SV=1[more]
A0A067F037_CITSI4.5e-3487.84Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034455mg PE=4 SV=1[more]
V4UR64_9ROSI4.5e-3487.84Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010088mg PE=4 SV=1[more]
BLAST of Cucsa.170640 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G28088.14.2e-3179.17 Low temperature and salt responsive protein family[more]
AT4G30660.11.2e-3078.08 Low temperature and salt responsive protein family[more]
AT2G24040.16.0e-3076.39 Low temperature and salt responsive protein family[more]
AT4G30650.11.2e-2276.67 Low temperature and salt responsive protein family[more]
AT2G38905.13.6e-1468.63 Low temperature and salt responsive protein family[more]
BLAST of Cucsa.170640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457875|ref|XP_004146673.1|1.7e-37100.00PREDICTED: UPF0057 membrane protein At4g30660-like [Cucumis sativus][more]
gi|659086272|ref|XP_008443846.1|6.3e-3798.67PREDICTED: UPF0057 membrane protein At4g30660-like [Cucumis melo][more]
gi|566177126|ref|XP_002308410.2|1.0e-3493.33hypothetical protein POPTR_0006s19630g [Populus trichocarpa][more]
gi|645275850|ref|XP_008243011.1|1.3e-3493.15PREDICTED: UPF0057 membrane protein At4g30660-like [Prunus mume][more]
gi|568840116|ref|XP_006474017.1|3.8e-3489.19PREDICTED: UPF0057 membrane protein At4g30660 isoform X2 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000612PMP3
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.170640.1Cucsa.170640.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000612Proteolipid membrane potential modulatorPANTHERPTHR21659HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATEDcoord: 1..72
score: 6.4
IPR000612Proteolipid membrane potential modulatorPFAMPF01679Pmp3coord: 9..56
score: 5.5
IPR000612Proteolipid membrane potential modulatorPROSITEPS01309UPF0057coord: 12..27
scor