Cucsa.169480 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.169480
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	SAUR-like auxin-responsive protein family
Location	scaffold01163 : 275535 .. 275796 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCAAGCAAATTCTCAAAGCACAGTCCATTTCTGGGAGATGTCAATCCAGTGTTCCTAAAGGTCACATCGCAGTATACGTGGGAGAAATTCAGAAGAAGCGATTTTTGGTTCCGATATCTTACTTGAACCATCCTTCATTTTTAGACTTGCTAAGGAGGGCTGAAGAAGAGTTTGGATTCAACCACCCAACAGGAGGGTTGACCATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGATTGCACACTTCATGA

mRNA sequence

TGCCAAGCAAATTCTCAAAGCACAGTCCATTTCTGGGAGATGTCAATCCAGTGTTCCTAAAGGTCACATCGCAGTATACGTGGGAGAAATTCAGAAGAAGCGATTTTTGGTTCCGATATCTTACTTGAACCATCCTTCATTTTTAGACTTGCTAAGGAGGGCTGAAGAAGAGTTTGGATTCAACCACCCAACAGGAGGGTTGACCATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGATTGCACACTTCATGA

Coding sequence (CDS)

TGCCAAGCAAATTCTCAAAGCACAGTCCATTTCTGGGAGATGTCAATCCAGTGTTCCTAAAGGTCACATCGCAGTATACGTGGGAGAAATTCAGAAGAAGCGATTTTTGGTTCCGATATCTTACTTGAACCATCCTTCATTTTTAGACTTGCTAAGGAGGGCTGAAGAAGAGTTTGGATTCAACCACCCAACAGGAGGGTTGACCATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGATTGCACACTTCATGA

Protein sequence

AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS*

Homology

[Close]

BLAST of Cucsa.169480 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 7.0e-24
Identity = 56/84 (66.67%), Postives = 66/84 (78.57%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 60
          AK+IL   S S    S+ PKG +AVYVGE QKKR+LVP+SYLN PSF  LL ++EEEFGF
Sbjct: 10 AKKIL---SRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGF 69

Query: 61 NHPTGGLTIPCKEEAFIDVTSRLH 85
          +HP GGLTIPC E+ FI+VTSRLH
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Cucsa.169480 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.0e-23
Identity = 54/83 (65.06%), Postives = 66/83 (79.52%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 60
          AK+IL   + +G   S+ PKG +AVYVGE QKKR+LVP+SYLN PSF  LL ++EEEFGF
Sbjct: 10 AKKILSRSTGAG---SAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 61 NHPTGGLTIPCKEEAFIDVTSRL 84
          +HP GGLTIPC E+ FI+VTSRL
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Cucsa.169480 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 7.7e-23
Identity = 55/82 (67.07%), Postives = 64/82 (78.05%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 60
          AK+IL   S S    S+ PKG +AVYVGE QKKR+LVPISYLN PSF  LL ++EEEFGF
Sbjct: 10 AKKIL---SRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGF 69

Query: 61 NHPTGGLTIPCKEEAFIDVTSR 83
          +HP GGLTIPC E+ FI+VTSR
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of Cucsa.169480 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.0e-22
Identity = 53/83 (63.86%), Postives = 65/83 (78.31%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 60
          AK+IL   + +G   S+ PKG +AVYVGE QKKR+LVP+SYL+ PSF  LL ++EEEFGF
Sbjct: 10 AKKILSRSTAAG---SAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGF 69

Query: 61 NHPTGGLTIPCKEEAFIDVTSRL 84
           HP GGLTIPC E+ FI+VTSRL
Sbjct: 70 AHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Cucsa.169480 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-22
Identity = 54/83 (65.06%), Postives = 65/83 (78.31%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 60
          AK+IL   S S    S+ PKG +AVYVGE QKKR+LVP+SYLN PSF  LL ++E+EFGF
Sbjct: 10 AKKIL---SRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGF 69

Query: 61 NHPTGGLTIPCKEEAFIDVTSRL 84
          +HP GGLTIPC E+ FI+VTSRL
Sbjct: 70 DHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of Cucsa.169480 vs. TrEMBL
Match: A0A0A0LIZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.5e-41
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 60
          AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF
Sbjct: 12 AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 71

Query: 61 NHPTGGLTIPCKEEAFIDVTSRLHTS 87
          NHPTGGLTIPCKEEAFIDVTSRLHTS
Sbjct: 72 NHPTGGLTIPCKEEAFIDVTSRLHTS 97

[Close]

BLAST of Cucsa.169480 vs. TrEMBL
Match: A0A0A0LM65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 5.2e-34
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 60
          AKQILK +++S RCQS VPKGHI VYVGE Q+KRFLVPISYLNHPSF++LL RAEEEFGF
Sbjct: 12 AKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGF 71

Query: 61 NHPTGGLTIPCKEEAFIDVTSRLHTS 87
          +HPTGGLTIPCKEEAFIDVTSRLH S
Sbjct: 72 SHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Cucsa.169480 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 8.8e-34
Identity = 67/86 (77.91%), Postives = 80/86 (93.02%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 60
          AKQI + QS+S RC S++PKGHIAVYVGEI++KRF+VP+SYLNHP+FL LL RAEEEFGF
Sbjct: 12 AKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLSLLNRAEEEFGF 71

Query: 61 NHPTGGLTIPCKEEAFIDVTSRLHTS 87
          NHP+GGLTIPCKE+AFID+TS+LHTS
Sbjct: 72 NHPSGGLTIPCKEDAFIDLTSKLHTS 97

[Close]

BLAST of Cucsa.169480 vs. TrEMBL
Match: A0A0A0LLF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258750 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.2e-33
Identity = 72/86 (83.72%), Postives = 78/86 (90.70%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 60
          AKQILK +S+S RCQS VPKGHI VYVGE Q+KRF VPISYLNHPSF++LL RAEEEFGF
Sbjct: 12 AKQILKMKSVSIRCQSDVPKGHIPVYVGENQRKRFFVPISYLNHPSFVNLLSRAEEEFGF 71

Query: 61 NHPTGGLTIPCKEEAFIDVTSRLHTS 87
          +HPTGGLTIPCKEEAFIDVTSRLH S
Sbjct: 72 SHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Cucsa.169480 vs. TrEMBL
Match: A0A0A0LPG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 3.7e-32
Identity = 67/85 (78.82%), Postives = 77/85 (90.59%), Query Frame = 1


Query: 2  KQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGFN 61
          KQILK Q +S + +S +PKGHIAVYVGEIQ KRF+VPIS+LNHPSFL+LL+RAEEEFGFN
Sbjct: 13 KQILKIQGVSTKVKSDIPKGHIAVYVGEIQTKRFVVPISFLNHPSFLNLLKRAEEEFGFN 72

Query: 62 HPTGGLTIPCKEEAFIDVTSRLHTS 87
          HP GGLTIPC+EE FID+TSRLHTS
Sbjct: 73 HPMGGLTIPCREETFIDLTSRLHTS 97

[Close]

BLAST of Cucsa.169480 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.2 bits (287), Expect = 2.1e-26
Identity = 59/92 (64.13%), Postives = 72/92 (78.26%), Query Frame = 1


Query: 2   KQILKAQSISGRCQSS------VPKGHIAVYVGE---IQKKRFLVPISYLNHPSFLDLLR 61
           KQILK  S++ R ++S      VPKGH+AVYVGE   ++KKRF+VPIS+LNHPSF + L 
Sbjct: 13  KQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLS 72

Query: 62  RAEEEFGFNHPTGGLTIPCKEEAFID-VTSRL 84
           RAEEEFGFNHP GGLTIPC+EE F+D + SRL
Sbjct: 73  RAEEEFGFNHPMGGLTIPCREEVFLDLIASRL 104

[Close]

BLAST of Cucsa.169480 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.2 bits (282), Expect = 7.9e-26
Identity = 55/87 (63.22%), Postives = 71/87 (81.61%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEI-QKKRFLVPISYLNHPSFLDLLRRAEEEFG 60
          +KQ+LK+ S S     ++PKGH+AVYVGE+ QK+RF+VP++YL+HP F  LLR+AEEEFG
Sbjct: 12 SKQLLKSLSHSSN-NVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQKLLRKAEEEFG 71

Query: 61 FNHPTGGLTIPCKEEAFIDVTSRLHTS 87
          F+HP GGLTIPC E+ FID+ SRL TS
Sbjct: 72 FDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Cucsa.169480 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 3.9e-25
Identity = 56/84 (66.67%), Postives = 66/84 (78.57%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 60
          AK+IL   S S    S+ PKG +AVYVGE QKKR+LVP+SYLN PSF  LL ++EEEFGF
Sbjct: 10 AKKIL---SRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGF 69

Query: 61 NHPTGGLTIPCKEEAFIDVTSRLH 85
          +HP GGLTIPC E+ FI+VTSRLH
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Cucsa.169480 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 6.7e-25
Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSS----VPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEE 60
          +KQIL+   +     SS    VPKG++AVYVGE   KRF+VP+SYL+ PSF DLLR+AEE
Sbjct: 12 SKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQPSFQDLLRKAEE 71

Query: 61 EFGFNHPTGGLTIPCKEEAFIDVTSRLH 85
          EFGF+HP GGLTIPC EE FID+ SR +
Sbjct: 72 EFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of Cucsa.169480 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.4 bits (272), Expect = 1.1e-24
Identity = 54/83 (65.06%), Postives = 66/83 (79.52%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 60
          AK+IL   + +G   S+ PKG +AVYVGE QKKR+LVP+SYLN PSF  LL ++EEEFGF
Sbjct: 10 AKKILSRSTGAG---SAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 61 NHPTGGLTIPCKEEAFIDVTSRL 84
          +HP GGLTIPC E+ FI+VTSRL
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Cucsa.169480 vs. NCBI nr
Match: gi|449458550|ref|XP_004147010.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 2.2e-41
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 60
          AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF
Sbjct: 12 AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 71

Query: 61 NHPTGGLTIPCKEEAFIDVTSRLHTS 87
          NHPTGGLTIPCKEEAFIDVTSRLHTS
Sbjct: 72 NHPTGGLTIPCKEEAFIDVTSRLHTS 97

[Close]

BLAST of Cucsa.169480 vs. NCBI nr
Match: gi|659115590|ref|XP_008457631.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 173.7 bits (439), Expect = 1.4e-40
Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 60
          AKQILKAQSISGRCQSSVPKGHIAVYVGE+QK RFLVPISYLNHPSFLDLLRRAEEEFGF
Sbjct: 12 AKQILKAQSISGRCQSSVPKGHIAVYVGEVQKTRFLVPISYLNHPSFLDLLRRAEEEFGF 71

Query: 61 NHPTGGLTIPCKEEAFIDVTSRLHTS 87
          NHPTGGLTIPCKEEAFIDVTSRLHTS
Sbjct: 72 NHPTGGLTIPCKEEAFIDVTSRLHTS 97

[Close]

BLAST of Cucsa.169480 vs. NCBI nr
Match: gi|778669591|ref|XP_011649272.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 7.4e-34
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 60
          AKQILK +++S RCQS VPKGHI VYVGE Q+KRFLVPISYLNHPSF++LL RAEEEFGF
Sbjct: 12 AKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGF 71

Query: 61 NHPTGGLTIPCKEEAFIDVTSRLHTS 87
          +HPTGGLTIPCKEEAFIDVTSRLH S
Sbjct: 72 SHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Cucsa.169480 vs. NCBI nr
Match: gi|659115594|ref|XP_008457634.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-33
Identity = 72/86 (83.72%), Postives = 78/86 (90.70%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 60
          AKQILK +++S RCQS VPKGHI VYVGE Q+KRFLVPISYLNHPSF+ LL RAEEEFGF
Sbjct: 12 AKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVHLLSRAEEEFGF 71

Query: 61 NHPTGGLTIPCKEEAFIDVTSRLHTS 87
          +HPTGGLTIPCKEEAFIDVTSRLH S
Sbjct: 72 SHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Cucsa.169480 vs. NCBI nr
Match: gi|778669580|ref|XP_011649270.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-33
Identity = 67/86 (77.91%), Postives = 80/86 (93.02%), Query Frame = 1


Query: 1  AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGF 60
          AKQI + QS+S RC S++PKGHIAVYVGEI++KRF+VP+SYLNHP+FL LL RAEEEFGF
Sbjct: 12 AKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLSLLNRAEEEFGF 71

Query: 61 NHPTGGLTIPCKEEAFIDVTSRLHTS 87
          NHP+GGLTIPCKE+AFID+TS+LHTS
Sbjct: 72 NHPSGGLTIPCKEDAFIDLTSKLHTS 97

The following BLAST results are available for this feature:

BLAST of Cucsa.169480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU23_ARATH	7.0e-24	66.67	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU24_ARATH	2.0e-23	65.06	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	7.7e-23	67.07	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU19_ARATH	1.0e-22	63.86	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]
SAU22_ARATH	1.3e-22	65.06	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]

BLAST of Cucsa.169480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIZ4_CUCSA	1.5e-41	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1	[more]
A0A0A0LM65_CUCSA	5.2e-34	83.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	8.8e-34	77.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]
A0A0A0LLF7_CUCSA	1.2e-33	83.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258750 PE=4 SV=1	[more]
A0A0A0LPG7_CUCSA	3.7e-32	78.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1	[more]

BLAST of Cucsa.169480 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G34810.1	2.1e-26	64.13	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	7.9e-26	63.22	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	3.9e-25	66.67	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	6.7e-25	61.36	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	1.1e-24	65.06	SAUR-like auxin-responsive protein family	[more]

BLAST of Cucsa.169480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458550\|ref\|XP_004147010.1\|	2.2e-41	100.00	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115590\|ref\|XP_008457631.1\|	1.4e-40	97.67	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778669591\|ref\|XP_011649272.1\|	7.4e-34	83.72	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115594\|ref\|XP_008457634.1\|	1.3e-33	83.72	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778669580\|ref\|XP_011649270.1\|	1.3e-33	77.91	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.169480.1	Cucsa.169480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 6..82 score: 1.6
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 1..86 score: 6.8
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 1..86 score: 6.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.169480	Cla015869	Watermelon (97103) v1	cgywmB321
Cucsa.169480	Csa7G008440	Cucumber (Chinese Long) v2	cgycuB258
Cucsa.169480	MELO3C020762	Melon (DHL92) v3.5.1	cgymeB301
Cucsa.169480	MELO3C013401	Melon (DHL92) v3.5.1	cgymeB302
Cucsa.169480	CSPI02G12940	Wild cucumber (PI 183967)	cgycpiB265

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.169480	Cucumber (Gy14) v1	cgycgyB107
Cucsa.169480	Cucurbita maxima (Rimu)	cgycmaB0479
Cucsa.169480	Cucurbita maxima (Rimu)	cgycmaB0480
Cucsa.169480	Cucurbita moschata (Rifu)	cgycmoB0482
Cucsa.169480	Cucurbita moschata (Rifu)	cgycmoB0483
Cucsa.169480	Wild cucumber (PI 183967)	cgycpiB266
Cucsa.169480	Cucumber (Chinese Long) v2	cgycuB257
Cucsa.169480	Watermelon (Charleston Gray)	cgywcgB301
Cucsa.169480	Watermelon (97103) v1	cgywmB323
Cucsa.169480	Cucurbita pepo (Zucchini)	cgycpeB0466
Cucsa.169480	Cucurbita pepo (Zucchini)	cgycpeB0467
Cucsa.169480	Bottle gourd (USVL1VR-Ls)	cgylsiB281
Cucsa.169480	Bottle gourd (USVL1VR-Ls)	cgylsiB282
Cucsa.169480	Melon (DHL92) v3.6.1	cgymedB294
Cucsa.169480	Cucumber (Chinese Long) v3	cgycucB270
Cucsa.169480	Watermelon (97103) v2	cgywmbB304
Cucsa.169480	Watermelon (97103) v2	cgywmbB305
Cucsa.169480	Wax gourd	cgywgoB348