Cucsa.169480.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.TGCCAAGCAAATTCTCAAAGCACAGTCCATTTCTGGGAGATGTCAATCCAGTGTTCCTAAAGGTCACATCGCAGTATACGTGGGAGAAATTCAGAAGAAGCGATTTTTGGTTCCGATATCTTACTTGAACCATCCTTCATTTTTAGACTTGCTAAGGAGGGCTGAAGAAGAGTTTGGATTCAACCACCCAACAGGAGGGTTGACCATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGATTGCACACTTCATGA TGCCAAGCAAATTCTCAAAGCACAGTCCATTTCTGGGAGATGTCAATCCAGTGTTCCTAAAGGTCACATCGCAGTATACGTGGGAGAAATTCAGAAGAAGCGATTTTTGGTTCCGATATCTTACTTGAACCATCCTTCATTTTTAGACTTGCTAAGGAGGGCTGAAGAAGAGTTTGGATTCAACCACCCAACAGGAGGGTTGACCATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGATTGCACACTTCATGA TGCCAAGCAAATTCTCAAAGCACAGTCCATTTCTGGGAGATGTCAATCCAGTGTTCCTAAAGGTCACATCGCAGTATACGTGGGAGAAATTCAGAAGAAGCGATTTTTGGTTCCGATATCTTACTTGAACCATCCTTCATTTTTAGACTTGCTAAGGAGGGCTGAAGAAGAGTTTGGATTCAACCACCCAACAGGAGGGTTGACCATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGATTGCACACTTCATGA AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS*
BLAST of Cucsa.169480.1 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 7.0e-24 Identity = 56/84 (66.67%), Postives = 66/84 (78.57%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.0e-23 Identity = 54/83 (65.06%), Postives = 66/83 (79.52%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 7.7e-23 Identity = 55/82 (67.07%), Postives = 64/82 (78.05%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.0e-22 Identity = 53/83 (63.86%), Postives = 65/83 (78.31%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.3e-22 Identity = 54/83 (65.06%), Postives = 65/83 (78.31%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. TrEMBL
Match: A0A0A0LIZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 1.5e-41 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. TrEMBL
Match: A0A0A0LM65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 5.2e-34 Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 8.8e-34 Identity = 67/86 (77.91%), Postives = 80/86 (93.02%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. TrEMBL
Match: A0A0A0LLF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258750 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 1.2e-33 Identity = 72/86 (83.72%), Postives = 78/86 (90.70%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. TrEMBL
Match: A0A0A0LPG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 3.7e-32 Identity = 67/85 (78.82%), Postives = 77/85 (90.59%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 115.2 bits (287), Expect = 2.1e-26 Identity = 59/92 (64.13%), Postives = 72/92 (78.26%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 113.2 bits (282), Expect = 7.9e-26 Identity = 55/87 (63.22%), Postives = 71/87 (81.61%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 110.9 bits (276), Expect = 3.9e-25 Identity = 56/84 (66.67%), Postives = 66/84 (78.57%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 110.2 bits (274), Expect = 6.7e-25 Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 109.4 bits (272), Expect = 1.1e-24 Identity = 54/83 (65.06%), Postives = 66/83 (79.52%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. NCBI nr
Match: gi|449458550|ref|XP_004147010.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 176.4 bits (446), Expect = 2.2e-41 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. NCBI nr
Match: gi|659115590|ref|XP_008457631.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 173.7 bits (439), Expect = 1.4e-40 Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. NCBI nr
Match: gi|778669591|ref|XP_011649272.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 151.4 bits (381), Expect = 7.4e-34 Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. NCBI nr
Match: gi|659115594|ref|XP_008457634.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 150.6 bits (379), Expect = 1.3e-33 Identity = 72/86 (83.72%), Postives = 78/86 (90.70%), Query Frame = 1
BLAST of Cucsa.169480.1 vs. NCBI nr
Match: gi|778669580|ref|XP_011649270.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 150.6 bits (379), Expect = 1.3e-33 Identity = 67/86 (77.91%), Postives = 80/86 (93.02%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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